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Genes within 1Mb (chr1:65585662:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 517908 sc-eQTL 3.34e-01 0.0825 0.0852 0.88 B L1
ENSG00000184588 PDE4B -206852 sc-eQTL 6.90e-01 -0.0356 0.0891 0.88 B L1
ENSG00000213625 LEPROT 165075 sc-eQTL 1.38e-01 0.162 0.108 0.88 B L1
ENSG00000162434 JAK1 517908 sc-eQTL 3.33e-01 0.0794 0.0818 0.88 CD4T L1
ENSG00000184588 PDE4B -206852 sc-eQTL 2.16e-01 -0.121 0.0974 0.88 CD4T L1
ENSG00000213625 LEPROT 165075 sc-eQTL 7.81e-04 0.426 0.125 0.88 CD4T L1
ENSG00000116678 LEPR 165010 sc-eQTL 4.20e-02 0.278 0.136 0.88 CD8T L1
ENSG00000162434 JAK1 517908 sc-eQTL 2.41e-01 0.125 0.106 0.88 CD8T L1
ENSG00000184588 PDE4B -206852 sc-eQTL 2.23e-01 -0.111 0.0906 0.88 CD8T L1
ENSG00000213625 LEPROT 165075 sc-eQTL 2.79e-02 0.309 0.14 0.88 CD8T L1
ENSG00000116678 LEPR 165010 sc-eQTL 9.45e-01 -0.00963 0.139 0.876 DC L1
ENSG00000162433 AK4 438113 sc-eQTL 4.93e-01 0.0802 0.117 0.876 DC L1
ENSG00000162434 JAK1 517908 sc-eQTL 7.90e-01 0.0259 0.0971 0.876 DC L1
ENSG00000162437 RAVER2 840567 sc-eQTL 2.95e-02 -0.27 0.123 0.876 DC L1
ENSG00000184588 PDE4B -206852 sc-eQTL 3.02e-01 -0.0776 0.075 0.876 DC L1
ENSG00000213625 LEPROT 165075 sc-eQTL 8.91e-02 0.234 0.137 0.876 DC L1
ENSG00000285079 AL513493.1 -118300 sc-eQTL 3.41e-01 -0.0706 0.074 0.876 DC L1
ENSG00000116678 LEPR 165010 sc-eQTL 5.93e-02 0.261 0.137 0.88 Mono L1
ENSG00000162433 AK4 438113 sc-eQTL 9.00e-01 -0.0159 0.127 0.88 Mono L1
ENSG00000162434 JAK1 517908 sc-eQTL 6.07e-01 0.0466 0.0904 0.88 Mono L1
ENSG00000184588 PDE4B -206852 sc-eQTL 8.76e-01 0.00781 0.0501 0.88 Mono L1
ENSG00000213625 LEPROT 165075 sc-eQTL 2.98e-01 0.0933 0.0893 0.88 Mono L1
ENSG00000116678 LEPR 165010 sc-eQTL 5.49e-02 0.261 0.135 0.882 NK L1
ENSG00000162434 JAK1 517908 sc-eQTL 7.28e-01 0.0225 0.0645 0.882 NK L1
ENSG00000184588 PDE4B -206852 sc-eQTL 9.68e-01 0.00348 0.0881 0.882 NK L1
ENSG00000213625 LEPROT 165075 sc-eQTL 1.03e-02 0.375 0.145 0.882 NK L1
ENSG00000162434 JAK1 517908 sc-eQTL 6.67e-01 0.0395 0.0916 0.88 Other_T L1
ENSG00000162437 RAVER2 840567 sc-eQTL 6.05e-01 0.0689 0.133 0.88 Other_T L1
ENSG00000184588 PDE4B -206852 sc-eQTL 8.58e-01 -0.0178 0.0996 0.88 Other_T L1
ENSG00000213625 LEPROT 165075 sc-eQTL 7.85e-01 0.0394 0.144 0.88 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 517908 sc-eQTL 6.19e-01 0.0807 0.162 0.895 B_Activated L2
ENSG00000184588 PDE4B -206852 sc-eQTL 1.61e-01 0.18 0.128 0.895 B_Activated L2
ENSG00000213625 LEPROT 165075 sc-eQTL 8.59e-01 0.0302 0.17 0.895 B_Activated L2
ENSG00000162434 JAK1 517908 sc-eQTL 4.62e-01 -0.0878 0.119 0.88 B_Intermediate L2
ENSG00000184588 PDE4B -206852 sc-eQTL 1.20e-01 -0.151 0.0967 0.88 B_Intermediate L2
ENSG00000213625 LEPROT 165075 sc-eQTL 3.03e-01 0.144 0.14 0.88 B_Intermediate L2
ENSG00000162434 JAK1 517908 sc-eQTL 9.65e-01 -0.00535 0.121 0.879 B_Memory L2
ENSG00000184588 PDE4B -206852 sc-eQTL 3.63e-01 0.112 0.123 0.879 B_Memory L2
ENSG00000213625 LEPROT 165075 sc-eQTL 6.60e-01 0.0617 0.14 0.879 B_Memory L2
ENSG00000162434 JAK1 517908 sc-eQTL 6.53e-01 0.0486 0.108 0.88 B_Naive1 L2
ENSG00000184588 PDE4B -206852 sc-eQTL 9.84e-01 0.00209 0.104 0.88 B_Naive1 L2
ENSG00000213625 LEPROT 165075 sc-eQTL 9.14e-01 0.0152 0.141 0.88 B_Naive1 L2
ENSG00000162434 JAK1 517908 sc-eQTL 4.57e-01 0.0848 0.114 0.88 B_Naive2 L2
ENSG00000184588 PDE4B -206852 sc-eQTL 2.53e-01 0.103 0.0897 0.88 B_Naive2 L2
ENSG00000213625 LEPROT 165075 sc-eQTL 9.29e-01 -0.0122 0.137 0.88 B_Naive2 L2
ENSG00000162434 JAK1 517908 sc-eQTL 9.82e-01 0.00305 0.132 0.88 CD4_CTL L2
ENSG00000184588 PDE4B -206852 sc-eQTL 5.49e-01 -0.0699 0.117 0.88 CD4_CTL L2
ENSG00000213625 LEPROT 165075 sc-eQTL 3.10e-01 -0.154 0.151 0.88 CD4_CTL L2
ENSG00000162434 JAK1 517908 sc-eQTL 6.78e-01 0.0334 0.0803 0.88 CD4_Naive L2
ENSG00000184588 PDE4B -206852 sc-eQTL 1.17e-01 -0.157 0.1 0.88 CD4_Naive L2
ENSG00000213625 LEPROT 165075 sc-eQTL 5.32e-03 0.36 0.128 0.88 CD4_Naive L2
ENSG00000162434 JAK1 517908 sc-eQTL 9.66e-01 0.00398 0.0922 0.88 CD4_TCM L2
ENSG00000184588 PDE4B -206852 sc-eQTL 7.10e-01 -0.0393 0.106 0.88 CD4_TCM L2
ENSG00000213625 LEPROT 165075 sc-eQTL 6.88e-03 0.359 0.131 0.88 CD4_TCM L2
ENSG00000162434 JAK1 517908 sc-eQTL 4.52e-01 0.0939 0.125 0.88 CD4_TEM L2
ENSG00000184588 PDE4B -206852 sc-eQTL 8.24e-01 -0.0256 0.115 0.88 CD4_TEM L2
ENSG00000213625 LEPROT 165075 sc-eQTL 6.96e-02 0.268 0.147 0.88 CD4_TEM L2
ENSG00000116678 LEPR 165010 sc-eQTL 3.74e-01 0.12 0.135 0.88 CD8_CTL L2
ENSG00000162434 JAK1 517908 sc-eQTL 2.14e-01 0.141 0.113 0.88 CD8_CTL L2
ENSG00000184588 PDE4B -206852 sc-eQTL 4.88e-01 0.0727 0.105 0.88 CD8_CTL L2
ENSG00000213625 LEPROT 165075 sc-eQTL 2.28e-03 0.418 0.135 0.88 CD8_CTL L2
ENSG00000116678 LEPR 165010 sc-eQTL 6.67e-01 0.0586 0.136 0.88 CD8_Naive L2
ENSG00000162434 JAK1 517908 sc-eQTL 8.29e-01 0.0246 0.114 0.88 CD8_Naive L2
ENSG00000184588 PDE4B -206852 sc-eQTL 1.51e-01 -0.137 0.095 0.88 CD8_Naive L2
ENSG00000213625 LEPROT 165075 sc-eQTL 3.90e-01 0.12 0.139 0.88 CD8_Naive L2
ENSG00000116678 LEPR 165010 sc-eQTL 1.54e-01 0.192 0.134 0.875 CD8_TCM L2
ENSG00000162434 JAK1 517908 sc-eQTL 3.92e-01 -0.1 0.117 0.875 CD8_TCM L2
ENSG00000184588 PDE4B -206852 sc-eQTL 6.32e-01 -0.0619 0.129 0.875 CD8_TCM L2
ENSG00000213625 LEPROT 165075 sc-eQTL 9.42e-01 -0.0106 0.146 0.875 CD8_TCM L2
ENSG00000116678 LEPR 165010 sc-eQTL 4.11e-02 0.26 0.126 0.884 CD8_TEM L2
ENSG00000162434 JAK1 517908 sc-eQTL 6.01e-01 0.0756 0.144 0.884 CD8_TEM L2
ENSG00000184588 PDE4B -206852 sc-eQTL 4.39e-01 -0.095 0.122 0.884 CD8_TEM L2
ENSG00000213625 LEPROT 165075 sc-eQTL 8.01e-01 0.0376 0.149 0.884 CD8_TEM L2
ENSG00000162434 JAK1 517908 sc-eQTL 4.15e-01 0.102 0.125 0.883 MAIT L2
ENSG00000162437 RAVER2 840567 sc-eQTL 5.23e-01 0.0851 0.133 0.883 MAIT L2
ENSG00000184588 PDE4B -206852 sc-eQTL 5.48e-01 -0.0642 0.107 0.883 MAIT L2
ENSG00000213625 LEPROT 165075 sc-eQTL 8.27e-01 -0.0315 0.144 0.883 MAIT L2
ENSG00000116678 LEPR 165010 sc-eQTL 9.25e-01 0.0125 0.132 0.882 NK_CD56bright L2
ENSG00000162434 JAK1 517908 sc-eQTL 6.42e-01 -0.0423 0.0907 0.882 NK_CD56bright L2
ENSG00000184588 PDE4B -206852 sc-eQTL 7.71e-01 0.0317 0.109 0.882 NK_CD56bright L2
ENSG00000213625 LEPROT 165075 sc-eQTL 3.47e-01 0.14 0.149 0.882 NK_CD56bright L2
ENSG00000116678 LEPR 165010 sc-eQTL 3.25e-01 0.142 0.144 0.884 NK_CD56dim L2
ENSG00000162434 JAK1 517908 sc-eQTL 1.80e-01 0.101 0.0751 0.884 NK_CD56dim L2
ENSG00000184588 PDE4B -206852 sc-eQTL 2.77e-01 -0.12 0.11 0.884 NK_CD56dim L2
ENSG00000213625 LEPROT 165075 sc-eQTL 3.92e-02 0.314 0.151 0.884 NK_CD56dim L2
ENSG00000116678 LEPR 165010 sc-eQTL 2.09e-01 0.157 0.125 0.884 NK_HLA L2
ENSG00000162434 JAK1 517908 sc-eQTL 3.99e-01 -0.0824 0.0974 0.884 NK_HLA L2
ENSG00000184588 PDE4B -206852 sc-eQTL 4.46e-01 0.0905 0.119 0.884 NK_HLA L2
ENSG00000213625 LEPROT 165075 sc-eQTL 2.14e-01 0.188 0.151 0.884 NK_HLA L2
ENSG00000116678 LEPR 165010 sc-eQTL 4.98e-01 0.0934 0.137 0.884 NK_cytokine L2
ENSG00000162434 JAK1 517908 sc-eQTL 3.39e-01 -0.0766 0.0799 0.884 NK_cytokine L2
ENSG00000184588 PDE4B -206852 sc-eQTL 1.67e-01 0.173 0.125 0.884 NK_cytokine L2
ENSG00000213625 LEPROT 165075 sc-eQTL 1.99e-01 0.187 0.145 0.884 NK_cytokine L2
ENSG00000162434 JAK1 517908 sc-eQTL 1.52e-01 0.197 0.137 0.9 PB L2
ENSG00000184588 PDE4B -206852 sc-eQTL 8.44e-01 0.0346 0.175 0.9 PB L2
ENSG00000213625 LEPROT 165075 sc-eQTL 3.42e-01 0.184 0.193 0.9 PB L2
ENSG00000162434 JAK1 517908 sc-eQTL 1.85e-01 -0.121 0.0912 0.88 Pro_T L2
ENSG00000162437 RAVER2 840567 sc-eQTL 9.62e-01 0.00571 0.121 0.88 Pro_T L2
ENSG00000184588 PDE4B -206852 sc-eQTL 7.85e-01 0.0307 0.112 0.88 Pro_T L2
ENSG00000213625 LEPROT 165075 sc-eQTL 3.57e-01 0.131 0.142 0.88 Pro_T L2
ENSG00000162434 JAK1 517908 sc-eQTL 6.34e-01 0.0548 0.115 0.88 Treg L2
ENSG00000184588 PDE4B -206852 sc-eQTL 7.68e-01 -0.031 0.105 0.88 Treg L2
ENSG00000213625 LEPROT 165075 sc-eQTL 7.71e-01 0.0434 0.149 0.88 Treg L2
ENSG00000116678 LEPR 165010 sc-eQTL 9.80e-01 -0.00366 0.144 0.878 cDC L2
ENSG00000162433 AK4 438113 sc-eQTL 5.37e-01 -0.0786 0.127 0.878 cDC L2
ENSG00000162434 JAK1 517908 sc-eQTL 3.54e-01 0.11 0.118 0.878 cDC L2
ENSG00000162437 RAVER2 840567 sc-eQTL 1.39e-02 -0.319 0.128 0.878 cDC L2
ENSG00000184588 PDE4B -206852 sc-eQTL 4.22e-01 -0.0641 0.0795 0.878 cDC L2
ENSG00000213625 LEPROT 165075 sc-eQTL 9.65e-01 0.00642 0.145 0.878 cDC L2
ENSG00000285079 AL513493.1 -118300 sc-eQTL 5.09e-01 -0.0343 0.0519 0.878 cDC L2
ENSG00000116678 LEPR 165010 sc-eQTL 4.57e-02 0.278 0.138 0.88 cMono_IL1B L2
ENSG00000162433 AK4 438113 sc-eQTL 9.23e-01 -0.0125 0.128 0.88 cMono_IL1B L2
ENSG00000162434 JAK1 517908 sc-eQTL 6.40e-01 0.0547 0.117 0.88 cMono_IL1B L2
ENSG00000184588 PDE4B -206852 sc-eQTL 9.33e-01 0.00544 0.0648 0.88 cMono_IL1B L2
ENSG00000213625 LEPROT 165075 sc-eQTL 2.81e-01 0.102 0.0941 0.88 cMono_IL1B L2
ENSG00000116678 LEPR 165010 sc-eQTL 5.87e-01 -0.0748 0.138 0.88 cMono_S100A L2
ENSG00000162433 AK4 438113 sc-eQTL 4.91e-01 0.09 0.13 0.88 cMono_S100A L2
ENSG00000162434 JAK1 517908 sc-eQTL 4.12e-01 0.099 0.12 0.88 cMono_S100A L2
ENSG00000184588 PDE4B -206852 sc-eQTL 8.45e-01 -0.0133 0.0682 0.88 cMono_S100A L2
ENSG00000213625 LEPROT 165075 sc-eQTL 7.62e-01 0.0342 0.113 0.88 cMono_S100A L2
ENSG00000162434 JAK1 517908 sc-eQTL 1.34e-01 0.241 0.16 0.87 gdT L2
ENSG00000162437 RAVER2 840567 sc-eQTL 4.64e-02 0.281 0.14 0.87 gdT L2
ENSG00000184588 PDE4B -206852 sc-eQTL 8.17e-01 0.0217 0.0938 0.87 gdT L2
ENSG00000213625 LEPROT 165075 sc-eQTL 2.56e-01 0.193 0.169 0.87 gdT L2
ENSG00000116678 LEPR 165010 sc-eQTL 5.85e-01 0.0748 0.137 0.878 intMono L2
ENSG00000162433 AK4 438113 sc-eQTL 3.46e-01 -0.121 0.128 0.878 intMono L2
ENSG00000162434 JAK1 517908 sc-eQTL 9.53e-01 0.00706 0.119 0.878 intMono L2
ENSG00000184588 PDE4B -206852 sc-eQTL 5.25e-01 0.0438 0.0687 0.878 intMono L2
ENSG00000213625 LEPROT 165075 sc-eQTL 7.71e-01 0.0335 0.115 0.878 intMono L2
ENSG00000116678 LEPR 165010 sc-eQTL 7.88e-01 0.0362 0.135 0.88 ncMono L2
ENSG00000162433 AK4 438113 sc-eQTL 4.42e-02 -0.241 0.119 0.88 ncMono L2
ENSG00000162434 JAK1 517908 sc-eQTL 6.30e-02 0.18 0.0963 0.88 ncMono L2
ENSG00000184588 PDE4B -206852 sc-eQTL 7.93e-01 -0.0203 0.0772 0.88 ncMono L2
ENSG00000213625 LEPROT 165075 sc-eQTL 3.61e-01 0.126 0.138 0.88 ncMono L2
ENSG00000116678 LEPR 165010 sc-eQTL 4.86e-01 -0.0954 0.137 0.876 pDC L2
ENSG00000162433 AK4 438113 sc-eQTL 3.48e-01 0.0837 0.0889 0.876 pDC L2
ENSG00000162434 JAK1 517908 sc-eQTL 1.73e-01 0.162 0.118 0.876 pDC L2
ENSG00000162437 RAVER2 840567 sc-eQTL 9.72e-02 -0.222 0.133 0.876 pDC L2
ENSG00000184588 PDE4B -206852 sc-eQTL 5.13e-01 -0.068 0.104 0.876 pDC L2
ENSG00000213625 LEPROT 165075 sc-eQTL 4.78e-02 0.291 0.146 0.876 pDC L2
ENSG00000285079 AL513493.1 -118300 sc-eQTL 4.13e-01 -0.0913 0.111 0.876 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 517908 sc-eQTL 9.48e-01 -0.00703 0.107 0.88 B_Memory LOneK1K
ENSG00000184588 PDE4B -206852 sc-eQTL 7.63e-01 -0.0267 0.0882 0.88 B_Memory LOneK1K
ENSG00000213625 LEPROT 165075 sc-eQTL 9.50e-02 0.23 0.137 0.88 B_Memory LOneK1K
ENSG00000162434 JAK1 517908 sc-eQTL 5.59e-01 0.0611 0.104 0.88 B_Naive LOneK1K
ENSG00000184588 PDE4B -206852 sc-eQTL 7.11e-01 0.0349 0.0938 0.88 B_Naive LOneK1K
ENSG00000213625 LEPROT 165075 sc-eQTL 8.55e-01 0.0241 0.132 0.88 B_Naive LOneK1K
ENSG00000116678 LEPR 165010 sc-eQTL 1.08e-01 0.22 0.136 0.88 CD14_Mono LOneK1K
ENSG00000162433 AK4 438113 sc-eQTL 9.24e-01 0.0126 0.131 0.88 CD14_Mono LOneK1K
ENSG00000162434 JAK1 517908 sc-eQTL 5.43e-01 0.0667 0.11 0.88 CD14_Mono LOneK1K
ENSG00000184588 PDE4B -206852 sc-eQTL 8.67e-01 0.00938 0.0559 0.88 CD14_Mono LOneK1K
ENSG00000213625 LEPROT 165075 sc-eQTL 3.61e-01 0.084 0.0917 0.88 CD14_Mono LOneK1K
ENSG00000116678 LEPR 165010 sc-eQTL 5.18e-01 0.0901 0.139 0.881 CD16_Mono LOneK1K
ENSG00000162433 AK4 438113 sc-eQTL 1.62e-01 -0.176 0.126 0.881 CD16_Mono LOneK1K
ENSG00000162434 JAK1 517908 sc-eQTL 2.57e-01 0.0963 0.0847 0.881 CD16_Mono LOneK1K
ENSG00000184588 PDE4B -206852 sc-eQTL 5.02e-01 0.0436 0.0648 0.881 CD16_Mono LOneK1K
ENSG00000213625 LEPROT 165075 sc-eQTL 1.61e-01 0.166 0.118 0.881 CD16_Mono LOneK1K
ENSG00000116678 LEPR 165010 sc-eQTL 8.63e-02 0.242 0.14 0.884 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 517908 sc-eQTL 5.29e-01 0.0417 0.0661 0.884 NK_CD56dim LOneK1K
ENSG00000184588 PDE4B -206852 sc-eQTL 8.95e-01 0.0135 0.103 0.884 NK_CD56dim LOneK1K
ENSG00000213625 LEPROT 165075 sc-eQTL 1.67e-02 0.348 0.144 0.884 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116675 DNAJC6 337443 pQTL 0.0103 -0.0507 0.0197 0.0 0.0 0.118
ENSG00000162433 AK4 438113 eQTL 0.0212 0.0762 0.033 0.0 0.0 0.121
ENSG00000213625 LEPROT 165075 eQTL 0.0015 0.091 0.0286 0.0 0.0 0.121

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000213625 LEPROT 165075 4.41e-06 5.75e-06 7.85e-07 3.29e-06 8.57e-07 1.33e-06 4.31e-06 9.02e-07 5.13e-06 2.43e-06 6.67e-06 3.52e-06 8.21e-06 1.92e-06 1.4e-06 2.57e-06 2.06e-06 3.36e-06 1.35e-06 1.3e-06 1.68e-06 4.79e-06 4.61e-06 1.9e-06 9.74e-06 1.14e-06 2.57e-06 1.45e-06 4.48e-06 5.73e-06 2.81e-06 3.42e-07 5.05e-07 1.85e-06 2.06e-06 9.08e-07 8.21e-07 4.68e-07 1.3e-06 3.28e-07 4.4e-07 7.99e-06 3.86e-07 1.65e-07 3.42e-07 4.64e-07 8.28e-07 1.82e-07 1.54e-07