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Genes within 1Mb (chr1:65541747:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 473993 sc-eQTL 4.17e-01 0.0697 0.0856 0.882 B L1
ENSG00000184588 PDE4B -250767 sc-eQTL 6.27e-01 -0.0436 0.0895 0.882 B L1
ENSG00000213625 LEPROT 121160 sc-eQTL 1.25e-01 0.168 0.109 0.882 B L1
ENSG00000162434 JAK1 473993 sc-eQTL 4.37e-01 0.0641 0.0822 0.882 CD4T L1
ENSG00000184588 PDE4B -250767 sc-eQTL 2.46e-01 -0.114 0.0979 0.882 CD4T L1
ENSG00000213625 LEPROT 121160 sc-eQTL 8.14e-04 0.426 0.125 0.882 CD4T L1
ENSG00000116678 LEPR 121095 sc-eQTL 3.97e-02 0.283 0.137 0.882 CD8T L1
ENSG00000162434 JAK1 473993 sc-eQTL 3.18e-01 0.107 0.107 0.882 CD8T L1
ENSG00000184588 PDE4B -250767 sc-eQTL 2.05e-01 -0.116 0.0909 0.882 CD8T L1
ENSG00000213625 LEPROT 121160 sc-eQTL 1.85e-02 0.332 0.14 0.882 CD8T L1
ENSG00000116678 LEPR 121095 sc-eQTL 9.91e-01 -0.00149 0.14 0.878 DC L1
ENSG00000162433 AK4 394198 sc-eQTL 3.52e-01 0.109 0.117 0.878 DC L1
ENSG00000162434 JAK1 473993 sc-eQTL 7.98e-01 0.025 0.0976 0.878 DC L1
ENSG00000162437 RAVER2 796652 sc-eQTL 1.90e-02 -0.292 0.123 0.878 DC L1
ENSG00000184588 PDE4B -250767 sc-eQTL 2.31e-01 -0.0906 0.0754 0.878 DC L1
ENSG00000213625 LEPROT 121160 sc-eQTL 1.24e-01 0.213 0.138 0.878 DC L1
ENSG00000285079 AL513493.1 -162215 sc-eQTL 3.26e-01 -0.0732 0.0743 0.878 DC L1
ENSG00000116678 LEPR 121095 sc-eQTL 3.12e-02 0.299 0.138 0.882 Mono L1
ENSG00000162433 AK4 394198 sc-eQTL 9.55e-01 0.0072 0.127 0.882 Mono L1
ENSG00000162434 JAK1 473993 sc-eQTL 6.57e-01 0.0403 0.0908 0.882 Mono L1
ENSG00000184588 PDE4B -250767 sc-eQTL 8.05e-01 0.0124 0.0503 0.882 Mono L1
ENSG00000213625 LEPROT 121160 sc-eQTL 3.72e-01 0.0803 0.0898 0.882 Mono L1
ENSG00000116678 LEPR 121095 sc-eQTL 7.19e-02 0.247 0.136 0.884 NK L1
ENSG00000162434 JAK1 473993 sc-eQTL 7.07e-01 0.0244 0.0649 0.884 NK L1
ENSG00000184588 PDE4B -250767 sc-eQTL 9.64e-01 0.00397 0.0886 0.884 NK L1
ENSG00000213625 LEPROT 121160 sc-eQTL 2.06e-02 0.341 0.146 0.884 NK L1
ENSG00000162434 JAK1 473993 sc-eQTL 7.18e-01 0.0334 0.0922 0.882 Other_T L1
ENSG00000162437 RAVER2 796652 sc-eQTL 8.09e-01 0.0325 0.134 0.882 Other_T L1
ENSG00000184588 PDE4B -250767 sc-eQTL 8.24e-01 -0.0223 0.1 0.882 Other_T L1
ENSG00000213625 LEPROT 121160 sc-eQTL 7.86e-01 0.0393 0.145 0.882 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 473993 sc-eQTL 6.38e-01 0.0769 0.163 0.898 B_Activated L2
ENSG00000184588 PDE4B -250767 sc-eQTL 2.24e-01 0.157 0.129 0.898 B_Activated L2
ENSG00000213625 LEPROT 121160 sc-eQTL 7.39e-01 0.0568 0.17 0.898 B_Activated L2
ENSG00000162434 JAK1 473993 sc-eQTL 4.71e-01 -0.0864 0.12 0.882 B_Intermediate L2
ENSG00000184588 PDE4B -250767 sc-eQTL 8.23e-02 -0.169 0.097 0.882 B_Intermediate L2
ENSG00000213625 LEPROT 121160 sc-eQTL 2.33e-01 0.168 0.14 0.882 B_Intermediate L2
ENSG00000162434 JAK1 473993 sc-eQTL 9.08e-01 -0.014 0.121 0.881 B_Memory L2
ENSG00000184588 PDE4B -250767 sc-eQTL 4.75e-01 0.0885 0.124 0.881 B_Memory L2
ENSG00000213625 LEPROT 121160 sc-eQTL 8.37e-01 0.029 0.141 0.881 B_Memory L2
ENSG00000162434 JAK1 473993 sc-eQTL 8.49e-01 0.0207 0.108 0.882 B_Naive1 L2
ENSG00000184588 PDE4B -250767 sc-eQTL 8.54e-01 -0.0192 0.104 0.882 B_Naive1 L2
ENSG00000213625 LEPROT 121160 sc-eQTL 8.02e-01 0.0355 0.141 0.882 B_Naive1 L2
ENSG00000162434 JAK1 473993 sc-eQTL 4.96e-01 0.0779 0.114 0.882 B_Naive2 L2
ENSG00000184588 PDE4B -250767 sc-eQTL 2.98e-01 0.094 0.0902 0.882 B_Naive2 L2
ENSG00000213625 LEPROT 121160 sc-eQTL 9.63e-01 0.00638 0.138 0.882 B_Naive2 L2
ENSG00000162434 JAK1 473993 sc-eQTL 7.83e-01 0.0366 0.133 0.882 CD4_CTL L2
ENSG00000184588 PDE4B -250767 sc-eQTL 5.63e-01 -0.068 0.117 0.882 CD4_CTL L2
ENSG00000213625 LEPROT 121160 sc-eQTL 4.86e-01 -0.106 0.152 0.882 CD4_CTL L2
ENSG00000162434 JAK1 473993 sc-eQTL 7.92e-01 0.0213 0.0807 0.882 CD4_Naive L2
ENSG00000184588 PDE4B -250767 sc-eQTL 1.39e-01 -0.149 0.101 0.882 CD4_Naive L2
ENSG00000213625 LEPROT 121160 sc-eQTL 6.10e-03 0.356 0.129 0.882 CD4_Naive L2
ENSG00000162434 JAK1 473993 sc-eQTL 8.58e-01 -0.0166 0.0926 0.882 CD4_TCM L2
ENSG00000184588 PDE4B -250767 sc-eQTL 7.05e-01 -0.0401 0.106 0.882 CD4_TCM L2
ENSG00000213625 LEPROT 121160 sc-eQTL 9.19e-03 0.347 0.132 0.882 CD4_TCM L2
ENSG00000162434 JAK1 473993 sc-eQTL 5.69e-01 0.071 0.125 0.882 CD4_TEM L2
ENSG00000184588 PDE4B -250767 sc-eQTL 6.96e-01 -0.0451 0.115 0.882 CD4_TEM L2
ENSG00000213625 LEPROT 121160 sc-eQTL 6.39e-02 0.274 0.147 0.882 CD4_TEM L2
ENSG00000116678 LEPR 121095 sc-eQTL 4.24e-01 0.108 0.135 0.882 CD8_CTL L2
ENSG00000162434 JAK1 473993 sc-eQTL 3.34e-01 0.11 0.114 0.882 CD8_CTL L2
ENSG00000184588 PDE4B -250767 sc-eQTL 5.32e-01 0.0658 0.105 0.882 CD8_CTL L2
ENSG00000213625 LEPROT 121160 sc-eQTL 1.88e-03 0.428 0.136 0.882 CD8_CTL L2
ENSG00000116678 LEPR 121095 sc-eQTL 5.85e-01 0.0748 0.137 0.882 CD8_Naive L2
ENSG00000162434 JAK1 473993 sc-eQTL 8.47e-01 0.022 0.114 0.882 CD8_Naive L2
ENSG00000184588 PDE4B -250767 sc-eQTL 1.76e-01 -0.13 0.0955 0.882 CD8_Naive L2
ENSG00000213625 LEPROT 121160 sc-eQTL 3.24e-01 0.138 0.139 0.882 CD8_Naive L2
ENSG00000116678 LEPR 121095 sc-eQTL 2.08e-01 0.171 0.135 0.877 CD8_TCM L2
ENSG00000162434 JAK1 473993 sc-eQTL 4.12e-01 -0.0969 0.118 0.877 CD8_TCM L2
ENSG00000184588 PDE4B -250767 sc-eQTL 6.18e-01 -0.0648 0.13 0.877 CD8_TCM L2
ENSG00000213625 LEPROT 121160 sc-eQTL 9.60e-01 0.00745 0.147 0.877 CD8_TCM L2
ENSG00000116678 LEPR 121095 sc-eQTL 2.87e-02 0.279 0.127 0.886 CD8_TEM L2
ENSG00000162434 JAK1 473993 sc-eQTL 6.57e-01 0.0646 0.145 0.886 CD8_TEM L2
ENSG00000184588 PDE4B -250767 sc-eQTL 3.55e-01 -0.114 0.123 0.886 CD8_TEM L2
ENSG00000213625 LEPROT 121160 sc-eQTL 5.42e-01 0.0913 0.149 0.886 CD8_TEM L2
ENSG00000162434 JAK1 473993 sc-eQTL 3.97e-01 0.106 0.125 0.885 MAIT L2
ENSG00000162437 RAVER2 796652 sc-eQTL 6.64e-01 0.0582 0.134 0.885 MAIT L2
ENSG00000184588 PDE4B -250767 sc-eQTL 4.98e-01 -0.0728 0.107 0.885 MAIT L2
ENSG00000213625 LEPROT 121160 sc-eQTL 7.67e-01 -0.0429 0.145 0.885 MAIT L2
ENSG00000116678 LEPR 121095 sc-eQTL 8.39e-01 0.0271 0.133 0.884 NK_CD56bright L2
ENSG00000162434 JAK1 473993 sc-eQTL 6.63e-01 -0.0399 0.0912 0.884 NK_CD56bright L2
ENSG00000184588 PDE4B -250767 sc-eQTL 7.48e-01 0.0352 0.109 0.884 NK_CD56bright L2
ENSG00000213625 LEPROT 121160 sc-eQTL 5.07e-01 0.0996 0.15 0.884 NK_CD56bright L2
ENSG00000116678 LEPR 121095 sc-eQTL 2.74e-01 0.159 0.145 0.886 NK_CD56dim L2
ENSG00000162434 JAK1 473993 sc-eQTL 1.72e-01 0.104 0.0755 0.886 NK_CD56dim L2
ENSG00000184588 PDE4B -250767 sc-eQTL 1.73e-01 -0.151 0.11 0.886 NK_CD56dim L2
ENSG00000213625 LEPROT 121160 sc-eQTL 4.38e-02 0.308 0.152 0.886 NK_CD56dim L2
ENSG00000116678 LEPR 121095 sc-eQTL 2.26e-01 0.153 0.126 0.886 NK_HLA L2
ENSG00000162434 JAK1 473993 sc-eQTL 3.90e-01 -0.0848 0.0984 0.886 NK_HLA L2
ENSG00000184588 PDE4B -250767 sc-eQTL 6.44e-01 0.0556 0.12 0.886 NK_HLA L2
ENSG00000213625 LEPROT 121160 sc-eQTL 3.49e-01 0.143 0.153 0.886 NK_HLA L2
ENSG00000116678 LEPR 121095 sc-eQTL 7.23e-01 0.0492 0.138 0.886 NK_cytokine L2
ENSG00000162434 JAK1 473993 sc-eQTL 4.64e-01 -0.059 0.0805 0.886 NK_cytokine L2
ENSG00000184588 PDE4B -250767 sc-eQTL 1.63e-01 0.176 0.126 0.886 NK_cytokine L2
ENSG00000213625 LEPROT 121160 sc-eQTL 2.00e-01 0.188 0.146 0.886 NK_cytokine L2
ENSG00000162434 JAK1 473993 sc-eQTL 1.62e-01 0.197 0.14 0.904 PB L2
ENSG00000184588 PDE4B -250767 sc-eQTL 9.89e-01 -0.00249 0.179 0.904 PB L2
ENSG00000213625 LEPROT 121160 sc-eQTL 4.17e-01 0.16 0.197 0.904 PB L2
ENSG00000162434 JAK1 473993 sc-eQTL 1.79e-01 -0.124 0.0918 0.883 Pro_T L2
ENSG00000162437 RAVER2 796652 sc-eQTL 8.86e-01 -0.0174 0.122 0.883 Pro_T L2
ENSG00000184588 PDE4B -250767 sc-eQTL 7.89e-01 0.0303 0.113 0.883 Pro_T L2
ENSG00000213625 LEPROT 121160 sc-eQTL 4.01e-01 0.121 0.143 0.883 Pro_T L2
ENSG00000162434 JAK1 473993 sc-eQTL 7.17e-01 0.0419 0.115 0.882 Treg L2
ENSG00000184588 PDE4B -250767 sc-eQTL 7.50e-01 -0.0336 0.105 0.882 Treg L2
ENSG00000213625 LEPROT 121160 sc-eQTL 6.41e-01 0.07 0.15 0.882 Treg L2
ENSG00000116678 LEPR 121095 sc-eQTL 9.84e-01 0.00293 0.145 0.88 cDC L2
ENSG00000162433 AK4 394198 sc-eQTL 8.01e-01 -0.0323 0.128 0.88 cDC L2
ENSG00000162434 JAK1 473993 sc-eQTL 4.30e-01 0.0944 0.119 0.88 cDC L2
ENSG00000162437 RAVER2 796652 sc-eQTL 7.86e-03 -0.346 0.129 0.88 cDC L2
ENSG00000184588 PDE4B -250767 sc-eQTL 3.83e-01 -0.07 0.0801 0.88 cDC L2
ENSG00000213625 LEPROT 121160 sc-eQTL 9.21e-01 -0.0145 0.146 0.88 cDC L2
ENSG00000285079 AL513493.1 -162215 sc-eQTL 4.85e-01 -0.0366 0.0523 0.88 cDC L2
ENSG00000116678 LEPR 121095 sc-eQTL 4.11e-02 0.285 0.139 0.882 cMono_IL1B L2
ENSG00000162433 AK4 394198 sc-eQTL 9.38e-01 0.0101 0.129 0.882 cMono_IL1B L2
ENSG00000162434 JAK1 473993 sc-eQTL 5.73e-01 0.0663 0.117 0.882 cMono_IL1B L2
ENSG00000184588 PDE4B -250767 sc-eQTL 9.19e-01 0.0066 0.0651 0.882 cMono_IL1B L2
ENSG00000213625 LEPROT 121160 sc-eQTL 3.51e-01 0.0885 0.0946 0.882 cMono_IL1B L2
ENSG00000116678 LEPR 121095 sc-eQTL 7.67e-01 -0.041 0.138 0.882 cMono_S100A L2
ENSG00000162433 AK4 394198 sc-eQTL 4.04e-01 0.11 0.131 0.882 cMono_S100A L2
ENSG00000162434 JAK1 473993 sc-eQTL 4.57e-01 0.0901 0.121 0.882 cMono_S100A L2
ENSG00000184588 PDE4B -250767 sc-eQTL 8.07e-01 -0.0168 0.0684 0.882 cMono_S100A L2
ENSG00000213625 LEPROT 121160 sc-eQTL 8.67e-01 0.019 0.113 0.882 cMono_S100A L2
ENSG00000162434 JAK1 473993 sc-eQTL 1.34e-01 0.241 0.16 0.87 gdT L2
ENSG00000162437 RAVER2 796652 sc-eQTL 4.64e-02 0.281 0.14 0.87 gdT L2
ENSG00000184588 PDE4B -250767 sc-eQTL 8.17e-01 0.0217 0.0938 0.87 gdT L2
ENSG00000213625 LEPROT 121160 sc-eQTL 2.56e-01 0.193 0.169 0.87 gdT L2
ENSG00000116678 LEPR 121095 sc-eQTL 4.81e-01 0.0969 0.137 0.88 intMono L2
ENSG00000162433 AK4 394198 sc-eQTL 3.33e-01 -0.125 0.129 0.88 intMono L2
ENSG00000162434 JAK1 473993 sc-eQTL 9.87e-01 -0.00188 0.12 0.88 intMono L2
ENSG00000184588 PDE4B -250767 sc-eQTL 5.96e-01 0.0368 0.0691 0.88 intMono L2
ENSG00000213625 LEPROT 121160 sc-eQTL 8.02e-01 0.029 0.115 0.88 intMono L2
ENSG00000116678 LEPR 121095 sc-eQTL 5.39e-01 0.0832 0.135 0.882 ncMono L2
ENSG00000162433 AK4 394198 sc-eQTL 7.86e-02 -0.212 0.12 0.882 ncMono L2
ENSG00000162434 JAK1 473993 sc-eQTL 8.41e-02 0.168 0.0969 0.882 ncMono L2
ENSG00000184588 PDE4B -250767 sc-eQTL 7.09e-01 -0.0289 0.0775 0.882 ncMono L2
ENSG00000213625 LEPROT 121160 sc-eQTL 4.40e-01 0.107 0.138 0.882 ncMono L2
ENSG00000116678 LEPR 121095 sc-eQTL 4.86e-01 -0.0954 0.137 0.876 pDC L2
ENSG00000162433 AK4 394198 sc-eQTL 3.48e-01 0.0837 0.0889 0.876 pDC L2
ENSG00000162434 JAK1 473993 sc-eQTL 1.73e-01 0.162 0.118 0.876 pDC L2
ENSG00000162437 RAVER2 796652 sc-eQTL 9.72e-02 -0.222 0.133 0.876 pDC L2
ENSG00000184588 PDE4B -250767 sc-eQTL 5.13e-01 -0.068 0.104 0.876 pDC L2
ENSG00000213625 LEPROT 121160 sc-eQTL 4.78e-02 0.291 0.146 0.876 pDC L2
ENSG00000285079 AL513493.1 -162215 sc-eQTL 4.13e-01 -0.0913 0.111 0.876 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000162434 JAK1 473993 sc-eQTL 8.53e-01 -0.0199 0.108 0.882 B_Memory LOneK1K
ENSG00000184588 PDE4B -250767 sc-eQTL 5.72e-01 -0.05 0.0884 0.882 B_Memory LOneK1K
ENSG00000213625 LEPROT 121160 sc-eQTL 9.16e-02 0.233 0.137 0.882 B_Memory LOneK1K
ENSG00000162434 JAK1 473993 sc-eQTL 7.08e-01 0.0393 0.105 0.882 B_Naive LOneK1K
ENSG00000184588 PDE4B -250767 sc-eQTL 8.45e-01 0.0185 0.0943 0.882 B_Naive LOneK1K
ENSG00000213625 LEPROT 121160 sc-eQTL 7.31e-01 0.0457 0.133 0.882 B_Naive LOneK1K
ENSG00000116678 LEPR 121095 sc-eQTL 7.31e-02 0.246 0.136 0.882 CD14_Mono LOneK1K
ENSG00000162433 AK4 394198 sc-eQTL 7.82e-01 0.0364 0.131 0.882 CD14_Mono LOneK1K
ENSG00000162434 JAK1 473993 sc-eQTL 5.20e-01 0.0708 0.11 0.882 CD14_Mono LOneK1K
ENSG00000184588 PDE4B -250767 sc-eQTL 8.30e-01 0.0121 0.0561 0.882 CD14_Mono LOneK1K
ENSG00000213625 LEPROT 121160 sc-eQTL 4.41e-01 0.0711 0.0921 0.882 CD14_Mono LOneK1K
ENSG00000116678 LEPR 121095 sc-eQTL 3.68e-01 0.126 0.14 0.884 CD16_Mono LOneK1K
ENSG00000162433 AK4 394198 sc-eQTL 1.96e-01 -0.164 0.126 0.884 CD16_Mono LOneK1K
ENSG00000162434 JAK1 473993 sc-eQTL 3.22e-01 0.0845 0.0851 0.884 CD16_Mono LOneK1K
ENSG00000184588 PDE4B -250767 sc-eQTL 5.54e-01 0.0386 0.0651 0.884 CD16_Mono LOneK1K
ENSG00000213625 LEPROT 121160 sc-eQTL 2.23e-01 0.145 0.118 0.884 CD16_Mono LOneK1K
ENSG00000116678 LEPR 121095 sc-eQTL 1.14e-01 0.224 0.141 0.886 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 473993 sc-eQTL 5.05e-01 0.0444 0.0665 0.886 NK_CD56dim LOneK1K
ENSG00000184588 PDE4B -250767 sc-eQTL 9.80e-01 -0.00263 0.103 0.886 NK_CD56dim LOneK1K
ENSG00000213625 LEPROT 121160 sc-eQTL 2.85e-02 0.321 0.146 0.886 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116675 DNAJC6 293528 pQTL 0.00932 -0.0515 0.0198 0.0 0.0 0.118
ENSG00000162433 AK4 394198 eQTL 0.0188 0.0777 0.033 0.0 0.0 0.121
ENSG00000213625 LEPROT 121160 eQTL 0.00217 0.0879 0.0286 0.0 0.0 0.121

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina