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Genes within 1Mb (chr1:64460091:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 866680 sc-eQTL 2.98e-01 -0.13 0.125 0.891 B L1
ENSG00000142856 ITGB3BP 866370 sc-eQTL 5.47e-01 -0.0862 0.143 0.891 B L1
ENSG00000162434 JAK1 -607663 sc-eQTL 6.61e-01 0.0387 0.088 0.891 B L1
ENSG00000203965 EFCAB7 936719 sc-eQTL 9.76e-01 -0.00432 0.147 0.891 B L1
ENSG00000213625 LEPROT -960496 sc-eQTL 3.05e-01 -0.115 0.112 0.891 B L1
ENSG00000079739 PGM1 866680 sc-eQTL 9.86e-01 -0.00188 0.108 0.891 CD4T L1
ENSG00000142856 ITGB3BP 866370 sc-eQTL 4.59e-01 -0.102 0.138 0.891 CD4T L1
ENSG00000158966 CACHD1 -10038 sc-eQTL 8.59e-01 -0.0146 0.0823 0.891 CD4T L1
ENSG00000162434 JAK1 -607663 sc-eQTL 9.02e-01 -0.0106 0.0863 0.891 CD4T L1
ENSG00000203965 EFCAB7 936719 sc-eQTL 8.16e-01 -0.0289 0.124 0.891 CD4T L1
ENSG00000213625 LEPROT -960496 sc-eQTL 2.95e-02 -0.292 0.133 0.891 CD4T L1
ENSG00000079739 PGM1 866680 sc-eQTL 4.57e-01 0.0895 0.12 0.891 CD8T L1
ENSG00000116678 LEPR -960561 sc-eQTL 5.09e-01 -0.0969 0.146 0.891 CD8T L1
ENSG00000142856 ITGB3BP 866370 sc-eQTL 9.92e-01 -0.00143 0.142 0.891 CD8T L1
ENSG00000158966 CACHD1 -10038 sc-eQTL 9.61e-01 -0.00349 0.0721 0.891 CD8T L1
ENSG00000162434 JAK1 -607663 sc-eQTL 1.19e-01 0.177 0.113 0.891 CD8T L1
ENSG00000203965 EFCAB7 936719 sc-eQTL 1.52e-01 -0.203 0.141 0.891 CD8T L1
ENSG00000213625 LEPROT -960496 sc-eQTL 3.10e-01 -0.153 0.15 0.891 CD8T L1
ENSG00000079739 PGM1 866680 sc-eQTL 5.49e-01 0.0798 0.133 0.892 DC L1
ENSG00000116678 LEPR -960561 sc-eQTL 1.44e-01 0.212 0.144 0.892 DC L1
ENSG00000142856 ITGB3BP 866370 sc-eQTL 4.62e-01 0.113 0.154 0.892 DC L1
ENSG00000162433 AK4 -687458 sc-eQTL 9.43e-01 -0.00866 0.122 0.892 DC L1
ENSG00000162434 JAK1 -607663 sc-eQTL 5.62e-01 0.0588 0.101 0.892 DC L1
ENSG00000162437 RAVER2 -285004 sc-eQTL 4.62e-01 -0.0955 0.13 0.892 DC L1
ENSG00000203965 EFCAB7 936719 sc-eQTL 7.16e-01 -0.0488 0.134 0.892 DC L1
ENSG00000213625 LEPROT -960496 sc-eQTL 5.70e-01 0.0818 0.144 0.892 DC L1
ENSG00000079739 PGM1 866680 sc-eQTL 1.40e-01 0.193 0.13 0.891 Mono L1
ENSG00000116678 LEPR -960561 sc-eQTL 3.62e-01 0.133 0.145 0.891 Mono L1
ENSG00000142856 ITGB3BP 866370 sc-eQTL 3.70e-02 -0.293 0.14 0.891 Mono L1
ENSG00000162433 AK4 -687458 sc-eQTL 9.25e-01 0.0125 0.133 0.891 Mono L1
ENSG00000162434 JAK1 -607663 sc-eQTL 8.41e-01 -0.019 0.0949 0.891 Mono L1
ENSG00000213625 LEPROT -960496 sc-eQTL 5.64e-01 -0.0542 0.0939 0.891 Mono L1
ENSG00000079739 PGM1 866680 sc-eQTL 2.02e-01 0.14 0.11 0.891 NK L1
ENSG00000116678 LEPR -960561 sc-eQTL 2.78e-01 0.152 0.14 0.891 NK L1
ENSG00000142856 ITGB3BP 866370 sc-eQTL 3.30e-02 0.301 0.14 0.891 NK L1
ENSG00000162434 JAK1 -607663 sc-eQTL 2.70e-01 0.0729 0.0659 0.891 NK L1
ENSG00000203965 EFCAB7 936719 sc-eQTL 8.70e-01 -0.0253 0.154 0.891 NK L1
ENSG00000213625 LEPROT -960496 sc-eQTL 4.40e-02 -0.303 0.149 0.891 NK L1
ENSG00000079739 PGM1 866680 sc-eQTL 6.14e-01 0.0643 0.127 0.891 Other_T L1
ENSG00000142856 ITGB3BP 866370 sc-eQTL 8.54e-01 -0.0184 0.1 0.891 Other_T L1
ENSG00000162434 JAK1 -607663 sc-eQTL 3.70e-01 -0.0872 0.0969 0.891 Other_T L1
ENSG00000162437 RAVER2 -285004 sc-eQTL 7.07e-01 -0.0532 0.141 0.891 Other_T L1
ENSG00000203965 EFCAB7 936719 sc-eQTL 1.59e-01 0.218 0.154 0.891 Other_T L1
ENSG00000213625 LEPROT -960496 sc-eQTL 8.40e-01 -0.0308 0.153 0.891 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 866680 sc-eQTL 8.64e-02 0.296 0.171 0.895 B_Activated L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 8.06e-01 0.0391 0.159 0.895 B_Activated L2
ENSG00000162434 JAK1 -607663 sc-eQTL 9.87e-01 -0.00263 0.158 0.895 B_Activated L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 4.73e-01 0.108 0.15 0.895 B_Activated L2
ENSG00000213625 LEPROT -960496 sc-eQTL 7.18e-01 -0.0599 0.165 0.895 B_Activated L2
ENSG00000079739 PGM1 866680 sc-eQTL 7.13e-01 -0.0559 0.152 0.891 B_Intermediate L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 9.28e-01 -0.0135 0.149 0.891 B_Intermediate L2
ENSG00000162434 JAK1 -607663 sc-eQTL 7.26e-01 -0.0451 0.128 0.891 B_Intermediate L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 6.97e-01 0.0574 0.147 0.891 B_Intermediate L2
ENSG00000213625 LEPROT -960496 sc-eQTL 8.41e-01 -0.0302 0.151 0.891 B_Intermediate L2
ENSG00000079739 PGM1 866680 sc-eQTL 8.01e-01 0.0374 0.148 0.892 B_Memory L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 6.57e-02 -0.283 0.153 0.892 B_Memory L2
ENSG00000162434 JAK1 -607663 sc-eQTL 1.81e-01 0.171 0.127 0.892 B_Memory L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 2.71e-01 0.168 0.152 0.892 B_Memory L2
ENSG00000213625 LEPROT -960496 sc-eQTL 5.96e-01 0.079 0.149 0.892 B_Memory L2
ENSG00000079739 PGM1 866680 sc-eQTL 7.97e-01 -0.0384 0.149 0.891 B_Naive1 L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 5.61e-01 -0.0849 0.146 0.891 B_Naive1 L2
ENSG00000162434 JAK1 -607663 sc-eQTL 4.12e-01 0.0928 0.113 0.891 B_Naive1 L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 8.38e-01 -0.0319 0.156 0.891 B_Naive1 L2
ENSG00000213625 LEPROT -960496 sc-eQTL 2.88e-01 -0.156 0.147 0.891 B_Naive1 L2
ENSG00000079739 PGM1 866680 sc-eQTL 8.32e-01 -0.0313 0.148 0.893 B_Naive2 L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 7.19e-01 0.0557 0.155 0.893 B_Naive2 L2
ENSG00000162434 JAK1 -607663 sc-eQTL 4.04e-01 0.1 0.12 0.893 B_Naive2 L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 5.91e-01 -0.0828 0.154 0.893 B_Naive2 L2
ENSG00000213625 LEPROT -960496 sc-eQTL 8.22e-01 -0.0326 0.145 0.893 B_Naive2 L2
ENSG00000079739 PGM1 866680 sc-eQTL 7.19e-01 0.0548 0.152 0.889 CD4_CTL L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 7.82e-01 -0.0431 0.156 0.889 CD4_CTL L2
ENSG00000158966 CACHD1 -10038 sc-eQTL 5.80e-01 -0.0313 0.0566 0.889 CD4_CTL L2
ENSG00000162434 JAK1 -607663 sc-eQTL 3.67e-01 0.126 0.139 0.889 CD4_CTL L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 2.73e-01 0.162 0.148 0.889 CD4_CTL L2
ENSG00000213625 LEPROT -960496 sc-eQTL 9.65e-01 0.00707 0.16 0.889 CD4_CTL L2
ENSG00000079739 PGM1 866680 sc-eQTL 7.78e-01 -0.0341 0.121 0.891 CD4_Naive L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 4.64e-01 -0.102 0.139 0.891 CD4_Naive L2
ENSG00000158966 CACHD1 -10038 sc-eQTL 8.35e-01 -0.0172 0.0825 0.891 CD4_Naive L2
ENSG00000162434 JAK1 -607663 sc-eQTL 8.33e-01 -0.0178 0.0842 0.891 CD4_Naive L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 5.45e-01 -0.0838 0.138 0.891 CD4_Naive L2
ENSG00000213625 LEPROT -960496 sc-eQTL 6.60e-02 -0.25 0.135 0.891 CD4_Naive L2
ENSG00000079739 PGM1 866680 sc-eQTL 7.86e-01 0.0342 0.125 0.891 CD4_TCM L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 5.44e-01 -0.09 0.148 0.891 CD4_TCM L2
ENSG00000158966 CACHD1 -10038 sc-eQTL 7.40e-01 -0.039 0.117 0.891 CD4_TCM L2
ENSG00000162434 JAK1 -607663 sc-eQTL 5.33e-01 0.0599 0.096 0.891 CD4_TCM L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 8.82e-01 -0.0214 0.143 0.891 CD4_TCM L2
ENSG00000213625 LEPROT -960496 sc-eQTL 3.10e-01 -0.141 0.139 0.891 CD4_TCM L2
ENSG00000079739 PGM1 866680 sc-eQTL 6.73e-01 0.063 0.149 0.891 CD4_TEM L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 7.18e-01 0.0531 0.147 0.891 CD4_TEM L2
ENSG00000158966 CACHD1 -10038 sc-eQTL 4.71e-01 0.0655 0.0906 0.891 CD4_TEM L2
ENSG00000162434 JAK1 -607663 sc-eQTL 8.32e-01 0.0274 0.129 0.891 CD4_TEM L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 4.90e-01 0.105 0.152 0.891 CD4_TEM L2
ENSG00000213625 LEPROT -960496 sc-eQTL 8.33e-01 -0.0324 0.153 0.891 CD4_TEM L2
ENSG00000079739 PGM1 866680 sc-eQTL 5.25e-01 -0.0868 0.136 0.891 CD8_CTL L2
ENSG00000116678 LEPR -960561 sc-eQTL 5.71e-01 -0.0816 0.144 0.891 CD8_CTL L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 6.72e-01 -0.0646 0.152 0.891 CD8_CTL L2
ENSG00000158966 CACHD1 -10038 sc-eQTL 1.84e-02 -0.152 0.0638 0.891 CD8_CTL L2
ENSG00000162434 JAK1 -607663 sc-eQTL 1.36e-01 0.18 0.12 0.891 CD8_CTL L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 6.95e-01 -0.0614 0.156 0.891 CD8_CTL L2
ENSG00000213625 LEPROT -960496 sc-eQTL 4.05e-01 -0.123 0.147 0.891 CD8_CTL L2
ENSG00000079739 PGM1 866680 sc-eQTL 6.22e-01 -0.0685 0.139 0.891 CD8_Naive L2
ENSG00000116678 LEPR -960561 sc-eQTL 6.11e-01 -0.0735 0.144 0.891 CD8_Naive L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 8.57e-01 -0.026 0.144 0.891 CD8_Naive L2
ENSG00000158966 CACHD1 -10038 sc-eQTL 9.79e-01 0.0026 0.1 0.891 CD8_Naive L2
ENSG00000162434 JAK1 -607663 sc-eQTL 7.04e-01 0.0459 0.12 0.891 CD8_Naive L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 4.00e-02 -0.279 0.135 0.891 CD8_Naive L2
ENSG00000213625 LEPROT -960496 sc-eQTL 5.73e-01 -0.0833 0.147 0.891 CD8_Naive L2
ENSG00000079739 PGM1 866680 sc-eQTL 2.90e-01 0.163 0.153 0.894 CD8_TCM L2
ENSG00000116678 LEPR -960561 sc-eQTL 1.58e-01 -0.207 0.146 0.894 CD8_TCM L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 8.61e-01 -0.0266 0.151 0.894 CD8_TCM L2
ENSG00000158966 CACHD1 -10038 sc-eQTL 3.47e-01 0.0746 0.0791 0.894 CD8_TCM L2
ENSG00000162434 JAK1 -607663 sc-eQTL 3.75e-01 -0.113 0.127 0.894 CD8_TCM L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 4.16e-01 0.125 0.154 0.894 CD8_TCM L2
ENSG00000213625 LEPROT -960496 sc-eQTL 7.15e-01 0.0581 0.159 0.894 CD8_TCM L2
ENSG00000079739 PGM1 866680 sc-eQTL 5.15e-01 0.107 0.164 0.9 CD8_TEM L2
ENSG00000116678 LEPR -960561 sc-eQTL 8.57e-01 0.0256 0.142 0.9 CD8_TEM L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 5.58e-01 0.0975 0.166 0.9 CD8_TEM L2
ENSG00000158966 CACHD1 -10038 sc-eQTL 3.81e-01 0.0297 0.0338 0.9 CD8_TEM L2
ENSG00000162434 JAK1 -607663 sc-eQTL 1.05e-01 0.259 0.159 0.9 CD8_TEM L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 7.75e-01 -0.0461 0.161 0.9 CD8_TEM L2
ENSG00000213625 LEPROT -960496 sc-eQTL 5.85e-01 -0.0902 0.165 0.9 CD8_TEM L2
ENSG00000079739 PGM1 866680 sc-eQTL 9.18e-01 0.0152 0.148 0.89 MAIT L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 6.37e-01 -0.07 0.148 0.89 MAIT L2
ENSG00000162434 JAK1 -607663 sc-eQTL 7.77e-01 -0.038 0.134 0.89 MAIT L2
ENSG00000162437 RAVER2 -285004 sc-eQTL 9.96e-01 0.000714 0.143 0.89 MAIT L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 5.45e-01 0.0923 0.152 0.89 MAIT L2
ENSG00000213625 LEPROT -960496 sc-eQTL 2.26e-01 0.186 0.154 0.89 MAIT L2
ENSG00000079739 PGM1 866680 sc-eQTL 2.62e-01 -0.163 0.145 0.889 NK_CD56bright L2
ENSG00000116678 LEPR -960561 sc-eQTL 7.91e-01 -0.0367 0.138 0.889 NK_CD56bright L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 6.58e-01 -0.0665 0.15 0.889 NK_CD56bright L2
ENSG00000162434 JAK1 -607663 sc-eQTL 7.55e-01 0.0296 0.0945 0.889 NK_CD56bright L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 7.52e-01 0.0468 0.148 0.889 NK_CD56bright L2
ENSG00000213625 LEPROT -960496 sc-eQTL 9.44e-01 -0.0109 0.155 0.889 NK_CD56bright L2
ENSG00000079739 PGM1 866680 sc-eQTL 1.02e-01 0.188 0.115 0.89 NK_CD56dim L2
ENSG00000116678 LEPR -960561 sc-eQTL 1.87e-01 0.196 0.148 0.89 NK_CD56dim L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 2.03e-02 0.34 0.145 0.89 NK_CD56dim L2
ENSG00000162434 JAK1 -607663 sc-eQTL 8.39e-01 0.0158 0.0777 0.89 NK_CD56dim L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 1.18e-01 -0.248 0.158 0.89 NK_CD56dim L2
ENSG00000213625 LEPROT -960496 sc-eQTL 1.26e-02 -0.39 0.155 0.89 NK_CD56dim L2
ENSG00000079739 PGM1 866680 sc-eQTL 2.90e-01 0.162 0.153 0.888 NK_HLA L2
ENSG00000116678 LEPR -960561 sc-eQTL 4.94e-01 -0.0873 0.127 0.888 NK_HLA L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 6.68e-02 0.271 0.147 0.888 NK_HLA L2
ENSG00000162434 JAK1 -607663 sc-eQTL 4.52e-01 -0.0746 0.0991 0.888 NK_HLA L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 9.01e-01 0.0177 0.141 0.888 NK_HLA L2
ENSG00000213625 LEPROT -960496 sc-eQTL 6.16e-01 -0.0773 0.154 0.888 NK_HLA L2
ENSG00000079739 PGM1 866680 sc-eQTL 6.67e-01 -0.0539 0.125 0.89 NK_cytokine L2
ENSG00000116678 LEPR -960561 sc-eQTL 4.14e-01 0.116 0.142 0.89 NK_cytokine L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 1.78e-01 0.187 0.138 0.89 NK_cytokine L2
ENSG00000162434 JAK1 -607663 sc-eQTL 5.95e-01 0.044 0.0826 0.89 NK_cytokine L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 8.89e-02 0.251 0.147 0.89 NK_cytokine L2
ENSG00000213625 LEPROT -960496 sc-eQTL 6.88e-01 -0.0604 0.15 0.89 NK_cytokine L2
ENSG00000079739 PGM1 866680 sc-eQTL 6.51e-02 -0.31 0.166 0.874 PB L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 7.85e-03 0.433 0.16 0.874 PB L2
ENSG00000162434 JAK1 -607663 sc-eQTL 5.88e-02 -0.234 0.123 0.874 PB L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 8.62e-01 0.0316 0.181 0.874 PB L2
ENSG00000213625 LEPROT -960496 sc-eQTL 2.01e-01 -0.223 0.173 0.874 PB L2
ENSG00000079739 PGM1 866680 sc-eQTL 1.05e-01 0.225 0.138 0.893 Pro_T L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 7.28e-01 -0.0434 0.125 0.893 Pro_T L2
ENSG00000162434 JAK1 -607663 sc-eQTL 5.09e-01 -0.0651 0.0984 0.893 Pro_T L2
ENSG00000162437 RAVER2 -285004 sc-eQTL 5.40e-01 -0.0797 0.13 0.893 Pro_T L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 2.97e-01 0.151 0.145 0.893 Pro_T L2
ENSG00000213625 LEPROT -960496 sc-eQTL 8.62e-02 -0.262 0.152 0.893 Pro_T L2
ENSG00000079739 PGM1 866680 sc-eQTL 9.12e-01 -0.0159 0.144 0.891 Treg L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 5.47e-01 -0.0914 0.151 0.891 Treg L2
ENSG00000158966 CACHD1 -10038 sc-eQTL 8.38e-01 -0.0234 0.114 0.891 Treg L2
ENSG00000162434 JAK1 -607663 sc-eQTL 7.09e-01 -0.0455 0.122 0.891 Treg L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 7.72e-01 0.042 0.145 0.891 Treg L2
ENSG00000213625 LEPROT -960496 sc-eQTL 3.60e-01 -0.145 0.158 0.891 Treg L2
ENSG00000079739 PGM1 866680 sc-eQTL 1.50e-01 0.205 0.142 0.888 cDC L2
ENSG00000116678 LEPR -960561 sc-eQTL 5.14e-02 0.287 0.147 0.888 cDC L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 1.16e-01 0.246 0.156 0.888 cDC L2
ENSG00000162433 AK4 -687458 sc-eQTL 8.40e-01 0.0264 0.131 0.888 cDC L2
ENSG00000162434 JAK1 -607663 sc-eQTL 2.82e-01 0.131 0.122 0.888 cDC L2
ENSG00000162437 RAVER2 -285004 sc-eQTL 9.71e-01 -0.00495 0.134 0.888 cDC L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 9.61e-01 -0.00614 0.126 0.888 cDC L2
ENSG00000213625 LEPROT -960496 sc-eQTL 2.12e-01 0.186 0.148 0.888 cDC L2
ENSG00000079739 PGM1 866680 sc-eQTL 2.02e-01 0.174 0.135 0.891 cMono_IL1B L2
ENSG00000116678 LEPR -960561 sc-eQTL 6.69e-01 0.0625 0.146 0.891 cMono_IL1B L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 3.78e-01 -0.126 0.143 0.891 cMono_IL1B L2
ENSG00000162433 AK4 -687458 sc-eQTL 9.33e-01 -0.0113 0.135 0.891 cMono_IL1B L2
ENSG00000162434 JAK1 -607663 sc-eQTL 5.02e-01 -0.0822 0.122 0.891 cMono_IL1B L2
ENSG00000213625 LEPROT -960496 sc-eQTL 7.47e-01 -0.0319 0.0988 0.891 cMono_IL1B L2
ENSG00000079739 PGM1 866680 sc-eQTL 3.46e-01 0.144 0.152 0.891 cMono_S100A L2
ENSG00000116678 LEPR -960561 sc-eQTL 9.68e-02 0.241 0.145 0.891 cMono_S100A L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 1.04e-01 -0.227 0.139 0.891 cMono_S100A L2
ENSG00000162433 AK4 -687458 sc-eQTL 2.57e-01 0.157 0.138 0.891 cMono_S100A L2
ENSG00000162434 JAK1 -607663 sc-eQTL 8.81e-01 -0.0192 0.127 0.891 cMono_S100A L2
ENSG00000213625 LEPROT -960496 sc-eQTL 3.75e-01 -0.106 0.119 0.891 cMono_S100A L2
ENSG00000079739 PGM1 866680 sc-eQTL 9.88e-01 -0.0026 0.173 0.891 gdT L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 4.66e-01 -0.134 0.183 0.891 gdT L2
ENSG00000162434 JAK1 -607663 sc-eQTL 4.23e-01 0.148 0.184 0.891 gdT L2
ENSG00000162437 RAVER2 -285004 sc-eQTL 2.05e-01 -0.205 0.161 0.891 gdT L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 5.66e-02 0.342 0.178 0.891 gdT L2
ENSG00000213625 LEPROT -960496 sc-eQTL 3.53e-01 0.18 0.194 0.891 gdT L2
ENSG00000079739 PGM1 866680 sc-eQTL 2.11e-01 0.189 0.15 0.893 intMono L2
ENSG00000116678 LEPR -960561 sc-eQTL 1.31e-01 -0.213 0.141 0.893 intMono L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 5.91e-01 0.0812 0.151 0.893 intMono L2
ENSG00000162433 AK4 -687458 sc-eQTL 5.08e-01 0.0882 0.133 0.893 intMono L2
ENSG00000162434 JAK1 -607663 sc-eQTL 3.05e-01 -0.126 0.123 0.893 intMono L2
ENSG00000213625 LEPROT -960496 sc-eQTL 2.88e-01 -0.126 0.118 0.893 intMono L2
ENSG00000079739 PGM1 866680 sc-eQTL 5.17e-01 0.0892 0.137 0.894 ncMono L2
ENSG00000116678 LEPR -960561 sc-eQTL 9.40e-01 0.0107 0.142 0.894 ncMono L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 2.56e-02 -0.323 0.144 0.894 ncMono L2
ENSG00000162433 AK4 -687458 sc-eQTL 2.38e-01 -0.15 0.126 0.894 ncMono L2
ENSG00000162434 JAK1 -607663 sc-eQTL 1.17e-01 0.16 0.102 0.894 ncMono L2
ENSG00000213625 LEPROT -960496 sc-eQTL 9.36e-01 -0.0116 0.146 0.894 ncMono L2
ENSG00000079739 PGM1 866680 sc-eQTL 5.20e-01 -0.103 0.16 0.884 pDC L2
ENSG00000116678 LEPR -960561 sc-eQTL 5.30e-01 0.0935 0.149 0.884 pDC L2
ENSG00000142856 ITGB3BP 866370 sc-eQTL 1.43e-01 -0.235 0.16 0.884 pDC L2
ENSG00000162433 AK4 -687458 sc-eQTL 7.80e-01 -0.0272 0.0969 0.884 pDC L2
ENSG00000162434 JAK1 -607663 sc-eQTL 7.38e-01 -0.0433 0.129 0.884 pDC L2
ENSG00000162437 RAVER2 -285004 sc-eQTL 1.80e-01 -0.196 0.145 0.884 pDC L2
ENSG00000203965 EFCAB7 936719 sc-eQTL 3.98e-01 -0.12 0.142 0.884 pDC L2
ENSG00000213625 LEPROT -960496 sc-eQTL 4.86e-01 -0.112 0.16 0.884 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 866680 sc-eQTL 8.23e-01 0.0311 0.139 0.891 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 866370 sc-eQTL 2.56e-01 -0.161 0.142 0.891 B_Memory LOneK1K
ENSG00000162434 JAK1 -607663 sc-eQTL 8.00e-01 0.0284 0.112 0.891 B_Memory LOneK1K
ENSG00000203965 EFCAB7 936719 sc-eQTL 2.34e-01 0.176 0.147 0.891 B_Memory LOneK1K
ENSG00000213625 LEPROT -960496 sc-eQTL 7.00e-01 -0.0555 0.144 0.891 B_Memory LOneK1K
ENSG00000079739 PGM1 866680 sc-eQTL 4.85e-01 -0.102 0.145 0.891 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 866370 sc-eQTL 7.89e-01 -0.0404 0.151 0.891 B_Naive LOneK1K
ENSG00000162434 JAK1 -607663 sc-eQTL 4.66e-01 0.0798 0.109 0.891 B_Naive LOneK1K
ENSG00000203965 EFCAB7 936719 sc-eQTL 6.84e-01 -0.0618 0.151 0.891 B_Naive LOneK1K
ENSG00000213625 LEPROT -960496 sc-eQTL 3.73e-01 -0.123 0.138 0.891 B_Naive LOneK1K
ENSG00000079739 PGM1 866680 sc-eQTL 1.16e-01 0.218 0.138 0.891 CD14_Mono LOneK1K
ENSG00000116678 LEPR -960561 sc-eQTL 1.05e-01 0.231 0.142 0.891 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 866370 sc-eQTL 3.65e-02 -0.288 0.137 0.891 CD14_Mono LOneK1K
ENSG00000162433 AK4 -687458 sc-eQTL 8.79e-01 0.0209 0.137 0.891 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -607663 sc-eQTL 4.70e-01 -0.0828 0.114 0.891 CD14_Mono LOneK1K
ENSG00000213625 LEPROT -960496 sc-eQTL 3.19e-01 -0.0957 0.0958 0.891 CD14_Mono LOneK1K
ENSG00000079739 PGM1 866680 sc-eQTL 1.24e-01 0.203 0.131 0.892 CD16_Mono LOneK1K
ENSG00000116678 LEPR -960561 sc-eQTL 3.36e-01 -0.138 0.143 0.892 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 866370 sc-eQTL 1.36e-01 -0.219 0.146 0.892 CD16_Mono LOneK1K
ENSG00000162433 AK4 -687458 sc-eQTL 6.11e-01 -0.0664 0.13 0.892 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -607663 sc-eQTL 9.34e-01 -0.00727 0.0876 0.892 CD16_Mono LOneK1K
ENSG00000213625 LEPROT -960496 sc-eQTL 5.23e-01 -0.0781 0.122 0.892 CD16_Mono LOneK1K
ENSG00000079739 PGM1 866680 sc-eQTL 1.41e-01 0.164 0.111 0.89 NK_CD56dim LOneK1K
ENSG00000116678 LEPR -960561 sc-eQTL 2.17e-01 0.178 0.144 0.89 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 866370 sc-eQTL 1.01e-02 0.364 0.14 0.89 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -607663 sc-eQTL 4.14e-01 0.0552 0.0674 0.89 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 936719 sc-eQTL 9.46e-01 -0.0106 0.157 0.89 NK_CD56dim LOneK1K
ENSG00000213625 LEPROT -960496 sc-eQTL 2.26e-02 -0.339 0.148 0.89 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116652 \N 913009 2.91e-07 1.36e-07 6.15e-08 1.97e-07 1.03e-07 8.33e-08 1.73e-07 5.56e-08 1.44e-07 7.6e-08 1.59e-07 1.19e-07 1.71e-07 7.64e-08 5.72e-08 7.98e-08 4.45e-08 1.64e-07 7.18e-08 5.04e-08 1.25e-07 1.39e-07 1.58e-07 2.68e-08 1.68e-07 1.26e-07 1.17e-07 1.04e-07 1.26e-07 1.03e-07 1.07e-07 3.93e-08 3.59e-08 9.3e-08 3.52e-08 3.22e-08 5.74e-08 8.68e-08 6.58e-08 3.6e-08 5.39e-08 1.46e-07 5.12e-08 1.2e-08 3.41e-08 1.8e-08 9.29e-08 1.9e-09 4.82e-08
ENSG00000162434 \N -506458 8.48e-07 5.6e-07 1.45e-07 3.81e-07 1.07e-07 2.16e-07 5.49e-07 1.78e-07 5.06e-07 2.82e-07 7.67e-07 4.28e-07 7.93e-07 1.34e-07 2.44e-07 2.84e-07 3.93e-07 4.11e-07 2.57e-07 1.67e-07 2.17e-07 4.31e-07 3.77e-07 1.94e-07 7.94e-07 2.56e-07 3.37e-07 2.59e-07 4.15e-07 5.99e-07 3.32e-07 5.77e-08 5.47e-08 1.69e-07 3.36e-07 1.44e-07 1.01e-07 9.71e-08 6.41e-08 2.2e-08 1.01e-07 5.29e-07 4.36e-08 1.07e-08 1.6e-07 1.37e-08 1.27e-07 1.28e-08 6.17e-08