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Genes within 1Mb (chr1:64360683:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 767272 sc-eQTL 3.57e-02 -0.222 0.105 0.857 B L1
ENSG00000088035 ALG6 993108 sc-eQTL 5.69e-01 0.0628 0.11 0.857 B L1
ENSG00000142856 ITGB3BP 766962 sc-eQTL 1.60e-02 -0.291 0.12 0.857 B L1
ENSG00000162434 JAK1 -707071 sc-eQTL 5.73e-01 0.0422 0.0749 0.857 B L1
ENSG00000203965 EFCAB7 837311 sc-eQTL 2.06e-01 -0.157 0.124 0.857 B L1
ENSG00000079739 PGM1 767272 sc-eQTL 6.52e-02 -0.169 0.0914 0.857 CD4T L1
ENSG00000088035 ALG6 993108 sc-eQTL 6.24e-01 -0.0499 0.102 0.857 CD4T L1
ENSG00000142856 ITGB3BP 766962 sc-eQTL 3.34e-02 -0.25 0.117 0.857 CD4T L1
ENSG00000158966 CACHD1 -109446 sc-eQTL 5.07e-01 0.0468 0.0703 0.857 CD4T L1
ENSG00000162434 JAK1 -707071 sc-eQTL 1.78e-02 0.174 0.0728 0.857 CD4T L1
ENSG00000203965 EFCAB7 837311 sc-eQTL 7.06e-01 -0.04 0.106 0.857 CD4T L1
ENSG00000079739 PGM1 767272 sc-eQTL 3.02e-02 -0.218 0.0998 0.857 CD8T L1
ENSG00000088035 ALG6 993108 sc-eQTL 1.05e-01 -0.18 0.111 0.857 CD8T L1
ENSG00000142856 ITGB3BP 766962 sc-eQTL 2.82e-01 -0.129 0.119 0.857 CD8T L1
ENSG00000158966 CACHD1 -109446 sc-eQTL 2.20e-01 0.0743 0.0604 0.857 CD8T L1
ENSG00000162434 JAK1 -707071 sc-eQTL 2.20e-03 0.289 0.0934 0.857 CD8T L1
ENSG00000203965 EFCAB7 837311 sc-eQTL 4.48e-02 -0.239 0.118 0.857 CD8T L1
ENSG00000079739 PGM1 767272 sc-eQTL 4.23e-01 -0.0899 0.112 0.858 DC L1
ENSG00000088035 ALG6 993108 sc-eQTL 3.08e-01 0.118 0.115 0.858 DC L1
ENSG00000142856 ITGB3BP 766962 sc-eQTL 5.74e-01 -0.073 0.13 0.858 DC L1
ENSG00000162433 AK4 -786866 sc-eQTL 3.48e-02 -0.216 0.102 0.858 DC L1
ENSG00000162434 JAK1 -707071 sc-eQTL 8.14e-01 -0.0201 0.0855 0.858 DC L1
ENSG00000162437 RAVER2 -384412 sc-eQTL 3.71e-01 0.098 0.109 0.858 DC L1
ENSG00000203965 EFCAB7 837311 sc-eQTL 7.64e-02 -0.2 0.112 0.858 DC L1
ENSG00000079739 PGM1 767272 sc-eQTL 3.02e-01 -0.115 0.111 0.857 Mono L1
ENSG00000088035 ALG6 993108 sc-eQTL 2.77e-02 0.254 0.115 0.857 Mono L1
ENSG00000142856 ITGB3BP 766962 sc-eQTL 4.51e-02 -0.239 0.119 0.857 Mono L1
ENSG00000162433 AK4 -786866 sc-eQTL 4.78e-01 -0.0801 0.113 0.857 Mono L1
ENSG00000162434 JAK1 -707071 sc-eQTL 8.22e-01 0.0182 0.0805 0.857 Mono L1
ENSG00000079739 PGM1 767272 sc-eQTL 9.96e-02 -0.155 0.0937 0.856 NK L1
ENSG00000088035 ALG6 993108 sc-eQTL 9.94e-01 0.000813 0.111 0.856 NK L1
ENSG00000142856 ITGB3BP 766962 sc-eQTL 9.91e-01 -0.00132 0.122 0.856 NK L1
ENSG00000162434 JAK1 -707071 sc-eQTL 4.82e-02 0.111 0.0561 0.856 NK L1
ENSG00000203965 EFCAB7 837311 sc-eQTL 5.61e-01 -0.0769 0.132 0.856 NK L1
ENSG00000079739 PGM1 767272 sc-eQTL 3.21e-01 -0.107 0.107 0.857 Other_T L1
ENSG00000088035 ALG6 993108 sc-eQTL 7.63e-01 0.0326 0.108 0.857 Other_T L1
ENSG00000142856 ITGB3BP 766962 sc-eQTL 9.04e-01 0.0102 0.0846 0.857 Other_T L1
ENSG00000162434 JAK1 -707071 sc-eQTL 9.34e-01 0.00678 0.082 0.857 Other_T L1
ENSG00000162437 RAVER2 -384412 sc-eQTL 1.92e-02 -0.277 0.118 0.857 Other_T L1
ENSG00000203965 EFCAB7 837311 sc-eQTL 4.71e-01 0.0941 0.13 0.857 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 767272 sc-eQTL 6.02e-02 -0.267 0.141 0.852 B_Activated L2
ENSG00000088035 ALG6 993108 sc-eQTL 1.09e-01 0.218 0.135 0.852 B_Activated L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 4.27e-01 -0.104 0.13 0.852 B_Activated L2
ENSG00000162434 JAK1 -707071 sc-eQTL 7.17e-01 0.0473 0.13 0.852 B_Activated L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 7.51e-01 0.0393 0.124 0.852 B_Activated L2
ENSG00000079739 PGM1 767272 sc-eQTL 2.73e-01 -0.139 0.126 0.856 B_Intermediate L2
ENSG00000088035 ALG6 993108 sc-eQTL 5.24e-01 -0.082 0.128 0.856 B_Intermediate L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 8.40e-02 -0.213 0.123 0.856 B_Intermediate L2
ENSG00000162434 JAK1 -707071 sc-eQTL 7.16e-01 0.0389 0.107 0.856 B_Intermediate L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 2.70e-01 -0.135 0.122 0.856 B_Intermediate L2
ENSG00000079739 PGM1 767272 sc-eQTL 3.79e-02 -0.261 0.125 0.856 B_Memory L2
ENSG00000088035 ALG6 993108 sc-eQTL 8.56e-02 -0.22 0.127 0.856 B_Memory L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 2.55e-01 -0.149 0.13 0.856 B_Memory L2
ENSG00000162434 JAK1 -707071 sc-eQTL 1.79e-01 -0.146 0.108 0.856 B_Memory L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 9.38e-01 -0.0101 0.13 0.856 B_Memory L2
ENSG00000079739 PGM1 767272 sc-eQTL 4.26e-01 -0.0992 0.125 0.857 B_Naive1 L2
ENSG00000088035 ALG6 993108 sc-eQTL 8.04e-01 -0.0312 0.125 0.857 B_Naive1 L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 3.91e-02 -0.252 0.121 0.857 B_Naive1 L2
ENSG00000162434 JAK1 -707071 sc-eQTL 2.22e-01 0.116 0.0945 0.857 B_Naive1 L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 1.01e-01 -0.214 0.13 0.857 B_Naive1 L2
ENSG00000079739 PGM1 767272 sc-eQTL 3.99e-01 -0.104 0.124 0.856 B_Naive2 L2
ENSG00000088035 ALG6 993108 sc-eQTL 1.34e-02 0.317 0.127 0.856 B_Naive2 L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 6.42e-02 -0.239 0.129 0.856 B_Naive2 L2
ENSG00000162434 JAK1 -707071 sc-eQTL 1.50e-01 0.144 0.1 0.856 B_Naive2 L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 6.41e-01 0.0602 0.129 0.856 B_Naive2 L2
ENSG00000079739 PGM1 767272 sc-eQTL 3.65e-01 -0.114 0.126 0.855 CD4_CTL L2
ENSG00000088035 ALG6 993108 sc-eQTL 3.12e-01 -0.134 0.133 0.855 CD4_CTL L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 2.90e-01 0.136 0.128 0.855 CD4_CTL L2
ENSG00000158966 CACHD1 -109446 sc-eQTL 3.32e-01 0.0454 0.0466 0.855 CD4_CTL L2
ENSG00000162434 JAK1 -707071 sc-eQTL 3.17e-01 0.115 0.115 0.855 CD4_CTL L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 6.99e-01 0.0473 0.122 0.855 CD4_CTL L2
ENSG00000079739 PGM1 767272 sc-eQTL 2.87e-01 -0.11 0.103 0.857 CD4_Naive L2
ENSG00000088035 ALG6 993108 sc-eQTL 3.21e-01 -0.111 0.112 0.857 CD4_Naive L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 2.15e-02 -0.273 0.118 0.857 CD4_Naive L2
ENSG00000158966 CACHD1 -109446 sc-eQTL 4.56e-01 0.0527 0.0705 0.857 CD4_Naive L2
ENSG00000162434 JAK1 -707071 sc-eQTL 1.93e-02 0.168 0.0711 0.857 CD4_Naive L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 9.02e-01 -0.0146 0.118 0.857 CD4_Naive L2
ENSG00000079739 PGM1 767272 sc-eQTL 1.61e-02 -0.258 0.106 0.857 CD4_TCM L2
ENSG00000088035 ALG6 993108 sc-eQTL 6.33e-01 -0.0599 0.125 0.857 CD4_TCM L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 5.35e-01 -0.079 0.127 0.857 CD4_TCM L2
ENSG00000158966 CACHD1 -109446 sc-eQTL 8.81e-01 0.0152 0.101 0.857 CD4_TCM L2
ENSG00000162434 JAK1 -707071 sc-eQTL 1.73e-01 0.112 0.0821 0.857 CD4_TCM L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 4.86e-02 -0.242 0.122 0.857 CD4_TCM L2
ENSG00000079739 PGM1 767272 sc-eQTL 4.93e-01 0.0863 0.126 0.857 CD4_TEM L2
ENSG00000088035 ALG6 993108 sc-eQTL 9.09e-01 0.0145 0.126 0.857 CD4_TEM L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 1.72e-01 -0.169 0.123 0.857 CD4_TEM L2
ENSG00000158966 CACHD1 -109446 sc-eQTL 2.02e-01 -0.0974 0.0761 0.857 CD4_TEM L2
ENSG00000162434 JAK1 -707071 sc-eQTL 1.28e-01 0.165 0.108 0.857 CD4_TEM L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 8.43e-01 0.0254 0.128 0.857 CD4_TEM L2
ENSG00000079739 PGM1 767272 sc-eQTL 5.33e-01 -0.0723 0.116 0.857 CD8_CTL L2
ENSG00000088035 ALG6 993108 sc-eQTL 5.62e-01 -0.0714 0.123 0.857 CD8_CTL L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 2.19e-01 -0.159 0.129 0.857 CD8_CTL L2
ENSG00000158966 CACHD1 -109446 sc-eQTL 2.90e-01 0.0579 0.0547 0.857 CD8_CTL L2
ENSG00000162434 JAK1 -707071 sc-eQTL 6.25e-01 0.0501 0.102 0.857 CD8_CTL L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 1.52e-01 -0.189 0.132 0.857 CD8_CTL L2
ENSG00000079739 PGM1 767272 sc-eQTL 1.96e-01 -0.15 0.116 0.857 CD8_Naive L2
ENSG00000088035 ALG6 993108 sc-eQTL 1.34e-01 -0.18 0.12 0.857 CD8_Naive L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 5.76e-01 -0.0679 0.121 0.857 CD8_Naive L2
ENSG00000158966 CACHD1 -109446 sc-eQTL 1.28e-01 0.128 0.0836 0.857 CD8_Naive L2
ENSG00000162434 JAK1 -707071 sc-eQTL 1.93e-04 0.371 0.0978 0.857 CD8_Naive L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 8.56e-01 -0.0207 0.114 0.857 CD8_Naive L2
ENSG00000079739 PGM1 767272 sc-eQTL 5.81e-01 -0.0701 0.127 0.856 CD8_TCM L2
ENSG00000088035 ALG6 993108 sc-eQTL 3.90e-01 -0.111 0.128 0.856 CD8_TCM L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 8.41e-01 0.0251 0.125 0.856 CD8_TCM L2
ENSG00000158966 CACHD1 -109446 sc-eQTL 8.34e-01 -0.0138 0.0655 0.856 CD8_TCM L2
ENSG00000162434 JAK1 -707071 sc-eQTL 2.34e-01 0.125 0.105 0.856 CD8_TCM L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 2.24e-01 -0.155 0.127 0.856 CD8_TCM L2
ENSG00000079739 PGM1 767272 sc-eQTL 3.34e-01 -0.127 0.132 0.854 CD8_TEM L2
ENSG00000088035 ALG6 993108 sc-eQTL 1.33e-01 -0.198 0.132 0.854 CD8_TEM L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 5.29e-01 -0.0841 0.133 0.854 CD8_TEM L2
ENSG00000158966 CACHD1 -109446 sc-eQTL 8.03e-01 0.00679 0.0272 0.854 CD8_TEM L2
ENSG00000162434 JAK1 -707071 sc-eQTL 2.00e-01 0.164 0.128 0.854 CD8_TEM L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 9.95e-02 -0.213 0.129 0.854 CD8_TEM L2
ENSG00000079739 PGM1 767272 sc-eQTL 5.75e-01 -0.0694 0.124 0.855 MAIT L2
ENSG00000088035 ALG6 993108 sc-eQTL 6.22e-01 -0.0604 0.122 0.855 MAIT L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 8.36e-01 -0.0258 0.124 0.855 MAIT L2
ENSG00000162434 JAK1 -707071 sc-eQTL 2.48e-01 -0.129 0.112 0.855 MAIT L2
ENSG00000162437 RAVER2 -384412 sc-eQTL 1.33e-02 -0.294 0.118 0.855 MAIT L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 8.18e-01 0.0294 0.128 0.855 MAIT L2
ENSG00000079739 PGM1 767272 sc-eQTL 7.92e-01 -0.0334 0.126 0.864 NK_CD56bright L2
ENSG00000088035 ALG6 993108 sc-eQTL 7.88e-02 0.227 0.128 0.864 NK_CD56bright L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 5.90e-01 0.0704 0.13 0.864 NK_CD56bright L2
ENSG00000162434 JAK1 -707071 sc-eQTL 9.50e-01 0.00513 0.0823 0.864 NK_CD56bright L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 2.09e-01 -0.162 0.128 0.864 NK_CD56bright L2
ENSG00000079739 PGM1 767272 sc-eQTL 4.42e-02 -0.198 0.0976 0.858 NK_CD56dim L2
ENSG00000088035 ALG6 993108 sc-eQTL 3.56e-01 -0.115 0.125 0.858 NK_CD56dim L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 8.76e-01 -0.0196 0.126 0.858 NK_CD56dim L2
ENSG00000162434 JAK1 -707071 sc-eQTL 4.39e-02 0.133 0.0658 0.858 NK_CD56dim L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 4.16e-01 -0.11 0.136 0.858 NK_CD56dim L2
ENSG00000079739 PGM1 767272 sc-eQTL 5.11e-01 -0.0902 0.137 0.863 NK_HLA L2
ENSG00000088035 ALG6 993108 sc-eQTL 8.32e-01 -0.0302 0.142 0.863 NK_HLA L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 8.30e-01 0.0285 0.133 0.863 NK_HLA L2
ENSG00000162434 JAK1 -707071 sc-eQTL 4.45e-01 -0.0678 0.0886 0.863 NK_HLA L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 8.40e-01 0.0256 0.126 0.863 NK_HLA L2
ENSG00000079739 PGM1 767272 sc-eQTL 6.44e-01 -0.0501 0.108 0.858 NK_cytokine L2
ENSG00000088035 ALG6 993108 sc-eQTL 7.35e-01 0.0414 0.122 0.858 NK_cytokine L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 2.83e-01 -0.129 0.12 0.858 NK_cytokine L2
ENSG00000162434 JAK1 -707071 sc-eQTL 1.14e-01 0.113 0.071 0.858 NK_cytokine L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 7.51e-01 0.0407 0.128 0.858 NK_cytokine L2
ENSG00000079739 PGM1 767272 sc-eQTL 3.21e-01 -0.16 0.161 0.874 PB L2
ENSG00000088035 ALG6 993108 sc-eQTL 3.64e-02 0.352 0.166 0.874 PB L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 9.05e-01 0.0188 0.158 0.874 PB L2
ENSG00000162434 JAK1 -707071 sc-eQTL 6.61e-01 0.0522 0.119 0.874 PB L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 3.39e-01 -0.165 0.172 0.874 PB L2
ENSG00000079739 PGM1 767272 sc-eQTL 2.47e-01 -0.135 0.116 0.859 Pro_T L2
ENSG00000088035 ALG6 993108 sc-eQTL 7.45e-01 -0.0386 0.119 0.859 Pro_T L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 3.34e-01 0.101 0.104 0.859 Pro_T L2
ENSG00000162434 JAK1 -707071 sc-eQTL 9.57e-01 -0.00442 0.0824 0.859 Pro_T L2
ENSG00000162437 RAVER2 -384412 sc-eQTL 9.43e-01 0.00775 0.109 0.859 Pro_T L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 2.66e-01 -0.135 0.121 0.859 Pro_T L2
ENSG00000079739 PGM1 767272 sc-eQTL 2.09e-01 -0.154 0.122 0.857 Treg L2
ENSG00000088035 ALG6 993108 sc-eQTL 3.15e-01 0.132 0.131 0.857 Treg L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 6.83e-01 -0.0526 0.128 0.857 Treg L2
ENSG00000158966 CACHD1 -109446 sc-eQTL 3.12e-01 0.0983 0.0969 0.857 Treg L2
ENSG00000162434 JAK1 -707071 sc-eQTL 3.13e-01 0.104 0.103 0.857 Treg L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 9.51e-01 -0.00759 0.123 0.857 Treg L2
ENSG00000079739 PGM1 767272 sc-eQTL 6.78e-01 -0.0498 0.12 0.856 cDC L2
ENSG00000088035 ALG6 993108 sc-eQTL 4.40e-01 0.0939 0.121 0.856 cDC L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 2.44e-01 -0.153 0.131 0.856 cDC L2
ENSG00000162433 AK4 -786866 sc-eQTL 3.74e-03 -0.315 0.107 0.856 cDC L2
ENSG00000162434 JAK1 -707071 sc-eQTL 4.23e-01 0.082 0.102 0.856 cDC L2
ENSG00000162437 RAVER2 -384412 sc-eQTL 5.13e-01 -0.0736 0.112 0.856 cDC L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 3.58e-02 -0.22 0.104 0.856 cDC L2
ENSG00000079739 PGM1 767272 sc-eQTL 2.80e-01 -0.125 0.116 0.857 cMono_IL1B L2
ENSG00000088035 ALG6 993108 sc-eQTL 1.05e-02 0.295 0.114 0.857 cMono_IL1B L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 5.80e-03 -0.334 0.12 0.857 cMono_IL1B L2
ENSG00000162433 AK4 -786866 sc-eQTL 8.00e-01 0.0292 0.115 0.857 cMono_IL1B L2
ENSG00000162434 JAK1 -707071 sc-eQTL 4.41e-01 0.0805 0.104 0.857 cMono_IL1B L2
ENSG00000079739 PGM1 767272 sc-eQTL 5.88e-01 -0.0695 0.128 0.857 cMono_S100A L2
ENSG00000088035 ALG6 993108 sc-eQTL 1.03e-01 0.211 0.129 0.857 cMono_S100A L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 3.54e-01 -0.109 0.118 0.857 cMono_S100A L2
ENSG00000162433 AK4 -786866 sc-eQTL 2.61e-01 -0.131 0.116 0.857 cMono_S100A L2
ENSG00000162434 JAK1 -707071 sc-eQTL 4.18e-01 -0.087 0.107 0.857 cMono_S100A L2
ENSG00000079739 PGM1 767272 sc-eQTL 4.43e-01 -0.104 0.135 0.845 gdT L2
ENSG00000088035 ALG6 993108 sc-eQTL 5.62e-02 0.273 0.142 0.845 gdT L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 5.58e-01 0.0839 0.143 0.845 gdT L2
ENSG00000162434 JAK1 -707071 sc-eQTL 1.23e-02 0.357 0.141 0.845 gdT L2
ENSG00000162437 RAVER2 -384412 sc-eQTL 5.02e-01 0.0852 0.126 0.845 gdT L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 6.66e-02 0.257 0.139 0.845 gdT L2
ENSG00000079739 PGM1 767272 sc-eQTL 7.72e-01 0.0376 0.13 0.862 intMono L2
ENSG00000088035 ALG6 993108 sc-eQTL 6.20e-01 -0.0599 0.121 0.862 intMono L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 7.08e-01 0.0486 0.13 0.862 intMono L2
ENSG00000162433 AK4 -786866 sc-eQTL 8.54e-02 -0.196 0.114 0.862 intMono L2
ENSG00000162434 JAK1 -707071 sc-eQTL 2.61e-01 0.119 0.105 0.862 intMono L2
ENSG00000079739 PGM1 767272 sc-eQTL 7.15e-01 -0.0427 0.117 0.857 ncMono L2
ENSG00000088035 ALG6 993108 sc-eQTL 3.57e-01 0.118 0.128 0.857 ncMono L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 7.90e-02 -0.216 0.123 0.857 ncMono L2
ENSG00000162433 AK4 -786866 sc-eQTL 5.06e-01 0.0717 0.108 0.857 ncMono L2
ENSG00000162434 JAK1 -707071 sc-eQTL 1.85e-01 0.115 0.0868 0.857 ncMono L2
ENSG00000079739 PGM1 767272 sc-eQTL 3.75e-01 -0.125 0.141 0.85 pDC L2
ENSG00000088035 ALG6 993108 sc-eQTL 1.52e-02 0.331 0.135 0.85 pDC L2
ENSG00000142856 ITGB3BP 766962 sc-eQTL 7.66e-01 0.0422 0.141 0.85 pDC L2
ENSG00000162433 AK4 -786866 sc-eQTL 5.14e-01 0.0557 0.0851 0.85 pDC L2
ENSG00000162434 JAK1 -707071 sc-eQTL 4.95e-01 -0.0777 0.114 0.85 pDC L2
ENSG00000162437 RAVER2 -384412 sc-eQTL 1.41e-01 0.188 0.127 0.85 pDC L2
ENSG00000203965 EFCAB7 837311 sc-eQTL 9.74e-01 0.00408 0.125 0.85 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 767272 sc-eQTL 2.68e-02 -0.261 0.117 0.857 B_Memory LOneK1K
ENSG00000088035 ALG6 993108 sc-eQTL 2.22e-01 -0.16 0.13 0.857 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 766962 sc-eQTL 1.29e-01 -0.183 0.12 0.857 B_Memory LOneK1K
ENSG00000162434 JAK1 -707071 sc-eQTL 4.85e-01 -0.0666 0.0952 0.857 B_Memory LOneK1K
ENSG00000203965 EFCAB7 837311 sc-eQTL 5.53e-01 -0.0748 0.126 0.857 B_Memory LOneK1K
ENSG00000079739 PGM1 767272 sc-eQTL 3.10e-01 -0.125 0.123 0.857 B_Naive LOneK1K
ENSG00000088035 ALG6 993108 sc-eQTL 2.16e-01 0.156 0.126 0.857 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 766962 sc-eQTL 1.26e-02 -0.316 0.126 0.857 B_Naive LOneK1K
ENSG00000162434 JAK1 -707071 sc-eQTL 7.30e-02 0.165 0.0918 0.857 B_Naive LOneK1K
ENSG00000203965 EFCAB7 837311 sc-eQTL 1.63e-01 -0.179 0.128 0.857 B_Naive LOneK1K
ENSG00000079739 PGM1 767272 sc-eQTL 3.82e-01 -0.104 0.119 0.857 CD14_Mono LOneK1K
ENSG00000088035 ALG6 993108 sc-eQTL 3.93e-03 0.329 0.113 0.857 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 766962 sc-eQTL 8.67e-03 -0.309 0.117 0.857 CD14_Mono LOneK1K
ENSG00000162433 AK4 -786866 sc-eQTL 6.34e-01 -0.0558 0.117 0.857 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -707071 sc-eQTL 9.71e-01 -0.00357 0.098 0.857 CD14_Mono LOneK1K
ENSG00000079739 PGM1 767272 sc-eQTL 4.59e-01 -0.0837 0.113 0.856 CD16_Mono LOneK1K
ENSG00000088035 ALG6 993108 sc-eQTL 7.89e-01 -0.0344 0.128 0.856 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 766962 sc-eQTL 5.53e-01 -0.0747 0.126 0.856 CD16_Mono LOneK1K
ENSG00000162433 AK4 -786866 sc-eQTL 4.69e-01 -0.0806 0.111 0.856 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -707071 sc-eQTL 9.67e-02 0.124 0.0744 0.856 CD16_Mono LOneK1K
ENSG00000079739 PGM1 767272 sc-eQTL 1.24e-01 -0.147 0.0954 0.858 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 993108 sc-eQTL 6.83e-01 -0.047 0.115 0.858 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 766962 sc-eQTL 5.53e-01 -0.0725 0.122 0.858 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -707071 sc-eQTL 3.13e-02 0.124 0.0573 0.858 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 837311 sc-eQTL 8.09e-01 -0.0326 0.135 0.858 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000203965 EFCAB7 837311 eQTL 8.50e-03 0.0893 0.0339 0.00165 0.0 0.137

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 \N 767272 2.91e-07 1.33e-07 6.26e-08 2.05e-07 1.03e-07 8.21e-08 1.9e-07 5.68e-08 1.59e-07 7.6e-08 1.59e-07 1.2e-07 1.95e-07 7.95e-08 5.82e-08 8.08e-08 4.18e-08 1.64e-07 7.18e-08 5.2e-08 1.22e-07 1.42e-07 1.62e-07 3.07e-08 1.72e-07 1.31e-07 1.17e-07 1.04e-07 1.34e-07 1.07e-07 1.06e-07 3.39e-08 3.13e-08 9.8e-08 3.07e-08 2.68e-08 5.51e-08 8.37e-08 6.41e-08 4.08e-08 5.48e-08 1.48e-07 5.12e-08 1.49e-08 3.41e-08 1.68e-08 9.29e-08 1.91e-09 4.83e-08
ENSG00000203965 EFCAB7 837311 2.8e-07 1.35e-07 5.72e-08 1.9e-07 9.87e-08 9.05e-08 1.67e-07 5.75e-08 1.5e-07 6.4e-08 1.63e-07 1.08e-07 1.69e-07 7.37e-08 6.25e-08 7.97e-08 4.18e-08 1.51e-07 6.75e-08 4.8e-08 1.25e-07 1.26e-07 1.5e-07 2.87e-08 1.63e-07 1.23e-07 1.18e-07 1.01e-07 1.24e-07 9.88e-08 1.06e-07 2.9e-08 3.73e-08 8.89e-08 3.63e-08 3.22e-08 5.61e-08 8.63e-08 6.71e-08 4.19e-08 5.28e-08 1.46e-07 5.21e-08 1.26e-08 3.83e-08 1.92e-08 1.2e-07 1.88e-09 4.8e-08