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Genes within 1Mb (chr1:64339207:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 745796 sc-eQTL 1.00e-02 -0.216 0.0833 0.282 B L1
ENSG00000088035 ALG6 971632 sc-eQTL 1.65e-01 0.122 0.0873 0.282 B L1
ENSG00000142856 ITGB3BP 745486 sc-eQTL 4.11e-01 -0.0798 0.0968 0.282 B L1
ENSG00000162434 JAK1 -728547 sc-eQTL 6.86e-01 -0.0242 0.0597 0.282 B L1
ENSG00000203965 EFCAB7 815835 sc-eQTL 6.14e-01 -0.0502 0.0993 0.282 B L1
ENSG00000079739 PGM1 745796 sc-eQTL 1.22e-01 -0.113 0.0726 0.282 CD4T L1
ENSG00000088035 ALG6 971632 sc-eQTL 8.84e-01 0.0118 0.0806 0.282 CD4T L1
ENSG00000142856 ITGB3BP 745486 sc-eQTL 3.31e-01 -0.091 0.0933 0.282 CD4T L1
ENSG00000158966 CACHD1 -130922 sc-eQTL 2.82e-01 0.06 0.0556 0.282 CD4T L1
ENSG00000162434 JAK1 -728547 sc-eQTL 3.29e-01 0.0571 0.0583 0.282 CD4T L1
ENSG00000203965 EFCAB7 815835 sc-eQTL 7.49e-01 0.0269 0.0839 0.282 CD4T L1
ENSG00000079739 PGM1 745796 sc-eQTL 3.04e-03 -0.235 0.0784 0.282 CD8T L1
ENSG00000088035 ALG6 971632 sc-eQTL 1.60e-01 -0.124 0.0878 0.282 CD8T L1
ENSG00000142856 ITGB3BP 745486 sc-eQTL 9.86e-01 0.00168 0.095 0.282 CD8T L1
ENSG00000158966 CACHD1 -130922 sc-eQTL 7.04e-01 -0.0183 0.048 0.282 CD8T L1
ENSG00000162434 JAK1 -728547 sc-eQTL 1.90e-01 0.0991 0.0754 0.282 CD8T L1
ENSG00000203965 EFCAB7 815835 sc-eQTL 2.88e-01 0.101 0.0944 0.282 CD8T L1
ENSG00000079739 PGM1 745796 sc-eQTL 6.25e-01 0.0445 0.0911 0.275 DC L1
ENSG00000088035 ALG6 971632 sc-eQTL 7.76e-01 -0.0268 0.094 0.275 DC L1
ENSG00000142856 ITGB3BP 745486 sc-eQTL 1.57e-01 -0.149 0.105 0.275 DC L1
ENSG00000162433 AK4 -808342 sc-eQTL 3.90e-01 -0.0719 0.0833 0.275 DC L1
ENSG00000162434 JAK1 -728547 sc-eQTL 5.17e-01 0.045 0.0694 0.275 DC L1
ENSG00000162437 RAVER2 -405888 sc-eQTL 2.44e-01 0.104 0.0887 0.275 DC L1
ENSG00000203965 EFCAB7 815835 sc-eQTL 1.15e-01 -0.144 0.0912 0.275 DC L1
ENSG00000079739 PGM1 745796 sc-eQTL 9.26e-01 0.00816 0.0878 0.282 Mono L1
ENSG00000088035 ALG6 971632 sc-eQTL 5.78e-01 0.051 0.0915 0.282 Mono L1
ENSG00000142856 ITGB3BP 745486 sc-eQTL 5.91e-02 -0.178 0.0938 0.282 Mono L1
ENSG00000162433 AK4 -808342 sc-eQTL 6.89e-01 -0.0357 0.0892 0.282 Mono L1
ENSG00000162434 JAK1 -728547 sc-eQTL 9.02e-01 -0.00785 0.0636 0.282 Mono L1
ENSG00000079739 PGM1 745796 sc-eQTL 5.62e-02 -0.145 0.0757 0.279 NK L1
ENSG00000088035 ALG6 971632 sc-eQTL 8.56e-01 -0.0163 0.0895 0.279 NK L1
ENSG00000142856 ITGB3BP 745486 sc-eQTL 7.46e-01 0.0319 0.0984 0.279 NK L1
ENSG00000162434 JAK1 -728547 sc-eQTL 8.57e-01 -0.00826 0.0458 0.279 NK L1
ENSG00000203965 EFCAB7 815835 sc-eQTL 5.76e-01 0.0599 0.107 0.279 NK L1
ENSG00000079739 PGM1 745796 sc-eQTL 4.61e-01 0.0628 0.0851 0.282 Other_T L1
ENSG00000088035 ALG6 971632 sc-eQTL 1.01e-01 -0.14 0.085 0.282 Other_T L1
ENSG00000142856 ITGB3BP 745486 sc-eQTL 1.59e-01 0.0944 0.0668 0.282 Other_T L1
ENSG00000162434 JAK1 -728547 sc-eQTL 5.94e-01 -0.0346 0.0649 0.282 Other_T L1
ENSG00000162437 RAVER2 -405888 sc-eQTL 4.00e-01 -0.0795 0.0943 0.282 Other_T L1
ENSG00000203965 EFCAB7 815835 sc-eQTL 3.61e-01 -0.0946 0.103 0.282 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 745796 sc-eQTL 1.18e-02 -0.289 0.113 0.281 B_Activated L2
ENSG00000088035 ALG6 971632 sc-eQTL 2.46e-01 0.128 0.11 0.281 B_Activated L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 8.75e-01 -0.0167 0.106 0.281 B_Activated L2
ENSG00000162434 JAK1 -728547 sc-eQTL 5.83e-01 0.0581 0.106 0.281 B_Activated L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 7.59e-01 -0.0307 0.1 0.281 B_Activated L2
ENSG00000079739 PGM1 745796 sc-eQTL 1.99e-01 -0.131 0.102 0.283 B_Intermediate L2
ENSG00000088035 ALG6 971632 sc-eQTL 9.94e-01 -0.000722 0.104 0.283 B_Intermediate L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 4.94e-01 -0.0684 0.0999 0.283 B_Intermediate L2
ENSG00000162434 JAK1 -728547 sc-eQTL 9.34e-01 0.00714 0.0863 0.283 B_Intermediate L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 4.92e-01 -0.0681 0.099 0.283 B_Intermediate L2
ENSG00000079739 PGM1 745796 sc-eQTL 6.72e-02 -0.181 0.0984 0.28 B_Memory L2
ENSG00000088035 ALG6 971632 sc-eQTL 5.04e-01 -0.0674 0.101 0.28 B_Memory L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 1.89e-01 -0.135 0.102 0.28 B_Memory L2
ENSG00000162434 JAK1 -728547 sc-eQTL 6.28e-02 -0.159 0.0847 0.28 B_Memory L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 8.31e-01 -0.0217 0.102 0.28 B_Memory L2
ENSG00000079739 PGM1 745796 sc-eQTL 5.66e-02 -0.193 0.101 0.282 B_Naive1 L2
ENSG00000088035 ALG6 971632 sc-eQTL 1.64e-01 0.142 0.102 0.282 B_Naive1 L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 6.72e-01 0.0423 0.1 0.282 B_Naive1 L2
ENSG00000162434 JAK1 -728547 sc-eQTL 8.39e-01 0.0157 0.0773 0.282 B_Naive1 L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 9.50e-01 0.00664 0.107 0.282 B_Naive1 L2
ENSG00000079739 PGM1 745796 sc-eQTL 1.41e-01 -0.147 0.0994 0.281 B_Naive2 L2
ENSG00000088035 ALG6 971632 sc-eQTL 3.32e-01 0.101 0.104 0.281 B_Naive2 L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 8.37e-01 -0.0216 0.105 0.281 B_Naive2 L2
ENSG00000162434 JAK1 -728547 sc-eQTL 8.58e-01 0.0145 0.0811 0.281 B_Naive2 L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 8.09e-01 0.0252 0.104 0.281 B_Naive2 L2
ENSG00000079739 PGM1 745796 sc-eQTL 9.83e-01 -0.00218 0.102 0.275 CD4_CTL L2
ENSG00000088035 ALG6 971632 sc-eQTL 8.46e-01 0.021 0.108 0.275 CD4_CTL L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 9.11e-01 0.0117 0.105 0.275 CD4_CTL L2
ENSG00000158966 CACHD1 -130922 sc-eQTL 6.15e-01 -0.0191 0.038 0.275 CD4_CTL L2
ENSG00000162434 JAK1 -728547 sc-eQTL 8.02e-01 -0.0236 0.0938 0.275 CD4_CTL L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 6.58e-02 0.182 0.0986 0.275 CD4_CTL L2
ENSG00000079739 PGM1 745796 sc-eQTL 3.45e-02 -0.172 0.0809 0.282 CD4_Naive L2
ENSG00000088035 ALG6 971632 sc-eQTL 4.65e-01 -0.065 0.0887 0.282 CD4_Naive L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 8.29e-01 -0.0204 0.0943 0.282 CD4_Naive L2
ENSG00000158966 CACHD1 -130922 sc-eQTL 3.68e-01 0.0503 0.0557 0.282 CD4_Naive L2
ENSG00000162434 JAK1 -728547 sc-eQTL 7.50e-01 0.0182 0.057 0.282 CD4_Naive L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 5.15e-01 0.061 0.0935 0.282 CD4_Naive L2
ENSG00000079739 PGM1 745796 sc-eQTL 2.49e-01 -0.0979 0.0847 0.282 CD4_TCM L2
ENSG00000088035 ALG6 971632 sc-eQTL 6.51e-01 0.0447 0.0986 0.282 CD4_TCM L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 1.27e-01 -0.153 0.0998 0.282 CD4_TCM L2
ENSG00000158966 CACHD1 -130922 sc-eQTL 2.83e-01 0.0853 0.0793 0.282 CD4_TCM L2
ENSG00000162434 JAK1 -728547 sc-eQTL 1.91e-01 0.0851 0.0648 0.282 CD4_TCM L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 5.66e-01 -0.0557 0.097 0.282 CD4_TCM L2
ENSG00000079739 PGM1 745796 sc-eQTL 8.59e-01 -0.0178 0.1 0.282 CD4_TEM L2
ENSG00000088035 ALG6 971632 sc-eQTL 7.00e-01 0.0388 0.1 0.282 CD4_TEM L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 7.28e-01 0.0342 0.0982 0.282 CD4_TEM L2
ENSG00000158966 CACHD1 -130922 sc-eQTL 1.61e-01 -0.085 0.0605 0.282 CD4_TEM L2
ENSG00000162434 JAK1 -728547 sc-eQTL 2.29e-01 0.104 0.0861 0.282 CD4_TEM L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 6.03e-01 -0.0529 0.102 0.282 CD4_TEM L2
ENSG00000079739 PGM1 745796 sc-eQTL 4.76e-02 -0.179 0.0899 0.282 CD8_CTL L2
ENSG00000088035 ALG6 971632 sc-eQTL 8.59e-02 -0.165 0.0958 0.282 CD8_CTL L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 7.39e-01 0.0338 0.101 0.282 CD8_CTL L2
ENSG00000158966 CACHD1 -130922 sc-eQTL 2.49e-01 0.0495 0.0428 0.282 CD8_CTL L2
ENSG00000162434 JAK1 -728547 sc-eQTL 4.37e-01 0.0624 0.0801 0.282 CD8_CTL L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 9.94e-02 0.171 0.103 0.282 CD8_CTL L2
ENSG00000079739 PGM1 745796 sc-eQTL 7.09e-02 -0.166 0.0914 0.282 CD8_Naive L2
ENSG00000088035 ALG6 971632 sc-eQTL 4.58e-02 -0.19 0.0944 0.282 CD8_Naive L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 9.75e-01 -0.00302 0.0958 0.282 CD8_Naive L2
ENSG00000158966 CACHD1 -130922 sc-eQTL 6.96e-01 -0.026 0.0664 0.282 CD8_Naive L2
ENSG00000162434 JAK1 -728547 sc-eQTL 8.70e-01 -0.013 0.0799 0.282 CD8_Naive L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 6.84e-01 -0.0368 0.0903 0.282 CD8_Naive L2
ENSG00000079739 PGM1 745796 sc-eQTL 9.31e-01 -0.00871 0.101 0.285 CD8_TCM L2
ENSG00000088035 ALG6 971632 sc-eQTL 9.40e-01 -0.00765 0.102 0.285 CD8_TCM L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 5.59e-01 0.0578 0.0987 0.285 CD8_TCM L2
ENSG00000158966 CACHD1 -130922 sc-eQTL 8.68e-01 0.00862 0.0519 0.285 CD8_TCM L2
ENSG00000162434 JAK1 -728547 sc-eQTL 8.59e-01 -0.0149 0.0834 0.285 CD8_TCM L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 6.34e-01 -0.0479 0.101 0.285 CD8_TCM L2
ENSG00000079739 PGM1 745796 sc-eQTL 4.39e-01 -0.081 0.104 0.279 CD8_TEM L2
ENSG00000088035 ALG6 971632 sc-eQTL 7.14e-01 -0.0386 0.105 0.279 CD8_TEM L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 1.75e-02 -0.25 0.104 0.279 CD8_TEM L2
ENSG00000158966 CACHD1 -130922 sc-eQTL 2.87e-01 0.0229 0.0215 0.279 CD8_TEM L2
ENSG00000162434 JAK1 -728547 sc-eQTL 5.80e-01 0.0565 0.102 0.279 CD8_TEM L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 7.08e-01 0.0384 0.103 0.279 CD8_TEM L2
ENSG00000079739 PGM1 745796 sc-eQTL 8.89e-01 0.0136 0.0974 0.279 MAIT L2
ENSG00000088035 ALG6 971632 sc-eQTL 4.87e-01 -0.067 0.0963 0.279 MAIT L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 5.84e-02 0.184 0.0967 0.279 MAIT L2
ENSG00000162434 JAK1 -728547 sc-eQTL 9.50e-01 -0.00551 0.0881 0.279 MAIT L2
ENSG00000162437 RAVER2 -405888 sc-eQTL 6.12e-02 -0.175 0.0931 0.279 MAIT L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 8.46e-01 0.0195 0.1 0.279 MAIT L2
ENSG00000079739 PGM1 745796 sc-eQTL 9.68e-01 0.00404 0.0997 0.284 NK_CD56bright L2
ENSG00000088035 ALG6 971632 sc-eQTL 2.08e-01 -0.128 0.102 0.284 NK_CD56bright L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 7.74e-01 -0.0296 0.103 0.284 NK_CD56bright L2
ENSG00000162434 JAK1 -728547 sc-eQTL 5.84e-01 -0.0356 0.0649 0.284 NK_CD56bright L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 7.61e-01 0.0309 0.102 0.284 NK_CD56bright L2
ENSG00000079739 PGM1 745796 sc-eQTL 9.15e-02 -0.136 0.08 0.28 NK_CD56dim L2
ENSG00000088035 ALG6 971632 sc-eQTL 1.16e-01 0.161 0.102 0.28 NK_CD56dim L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 5.26e-01 0.0652 0.103 0.28 NK_CD56dim L2
ENSG00000162434 JAK1 -728547 sc-eQTL 9.77e-01 0.00153 0.0543 0.28 NK_CD56dim L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 3.11e-01 -0.112 0.111 0.28 NK_CD56dim L2
ENSG00000079739 PGM1 745796 sc-eQTL 4.57e-01 -0.0787 0.106 0.29 NK_HLA L2
ENSG00000088035 ALG6 971632 sc-eQTL 9.48e-01 0.00721 0.11 0.29 NK_HLA L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 6.03e-01 0.0532 0.102 0.29 NK_HLA L2
ENSG00000162434 JAK1 -728547 sc-eQTL 6.99e-01 -0.0265 0.0684 0.29 NK_HLA L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 5.68e-01 -0.0557 0.0974 0.29 NK_HLA L2
ENSG00000079739 PGM1 745796 sc-eQTL 1.01e-01 -0.14 0.085 0.28 NK_cytokine L2
ENSG00000088035 ALG6 971632 sc-eQTL 2.63e-01 -0.108 0.0964 0.28 NK_cytokine L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 8.57e-01 -0.0171 0.0949 0.28 NK_cytokine L2
ENSG00000162434 JAK1 -728547 sc-eQTL 5.50e-01 -0.0337 0.0564 0.28 NK_cytokine L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 1.91e-01 0.132 0.101 0.28 NK_cytokine L2
ENSG00000079739 PGM1 745796 sc-eQTL 6.14e-01 0.0625 0.124 0.285 PB L2
ENSG00000088035 ALG6 971632 sc-eQTL 9.47e-01 0.0087 0.13 0.285 PB L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 4.64e-01 0.0886 0.121 0.285 PB L2
ENSG00000162434 JAK1 -728547 sc-eQTL 9.72e-01 -0.00323 0.0913 0.285 PB L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 9.85e-01 -0.00255 0.133 0.285 PB L2
ENSG00000079739 PGM1 745796 sc-eQTL 6.72e-01 0.0395 0.093 0.285 Pro_T L2
ENSG00000088035 ALG6 971632 sc-eQTL 5.44e-01 -0.0574 0.0946 0.285 Pro_T L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 8.17e-01 -0.0194 0.0834 0.285 Pro_T L2
ENSG00000162434 JAK1 -728547 sc-eQTL 7.62e-01 0.0199 0.0658 0.285 Pro_T L2
ENSG00000162437 RAVER2 -405888 sc-eQTL 6.96e-01 -0.034 0.0868 0.285 Pro_T L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 3.97e-02 -0.199 0.0959 0.285 Pro_T L2
ENSG00000079739 PGM1 745796 sc-eQTL 8.97e-01 -0.0124 0.096 0.282 Treg L2
ENSG00000088035 ALG6 971632 sc-eQTL 4.82e-01 0.0723 0.103 0.282 Treg L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 1.61e-02 -0.241 0.0994 0.282 Treg L2
ENSG00000158966 CACHD1 -130922 sc-eQTL 2.26e-03 0.23 0.0745 0.282 Treg L2
ENSG00000162434 JAK1 -728547 sc-eQTL 6.62e-01 0.0355 0.0811 0.282 Treg L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 7.07e-01 0.0363 0.0964 0.282 Treg L2
ENSG00000079739 PGM1 745796 sc-eQTL 9.29e-01 -0.00888 0.0993 0.28 cDC L2
ENSG00000088035 ALG6 971632 sc-eQTL 8.15e-01 0.0236 0.101 0.28 cDC L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 1.78e-02 -0.256 0.107 0.28 cDC L2
ENSG00000162433 AK4 -808342 sc-eQTL 9.76e-02 -0.15 0.0902 0.28 cDC L2
ENSG00000162434 JAK1 -728547 sc-eQTL 7.92e-01 0.0224 0.0848 0.28 cDC L2
ENSG00000162437 RAVER2 -405888 sc-eQTL 4.93e-01 0.0639 0.093 0.28 cDC L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 3.66e-01 -0.0791 0.0872 0.28 cDC L2
ENSG00000079739 PGM1 745796 sc-eQTL 5.29e-01 -0.0581 0.092 0.282 cMono_IL1B L2
ENSG00000088035 ALG6 971632 sc-eQTL 6.06e-01 0.0476 0.0921 0.282 cMono_IL1B L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 2.47e-01 -0.112 0.0965 0.282 cMono_IL1B L2
ENSG00000162433 AK4 -808342 sc-eQTL 5.65e-01 0.0525 0.091 0.282 cMono_IL1B L2
ENSG00000162434 JAK1 -728547 sc-eQTL 6.44e-01 -0.0384 0.0828 0.282 cMono_IL1B L2
ENSG00000079739 PGM1 745796 sc-eQTL 8.70e-01 0.0166 0.101 0.282 cMono_S100A L2
ENSG00000088035 ALG6 971632 sc-eQTL 1.80e-01 0.137 0.102 0.282 cMono_S100A L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 5.06e-02 -0.181 0.0921 0.282 cMono_S100A L2
ENSG00000162433 AK4 -808342 sc-eQTL 6.42e-01 -0.0427 0.0918 0.282 cMono_S100A L2
ENSG00000162434 JAK1 -728547 sc-eQTL 9.82e-01 0.00194 0.0847 0.282 cMono_S100A L2
ENSG00000079739 PGM1 745796 sc-eQTL 6.99e-01 0.0439 0.113 0.285 gdT L2
ENSG00000088035 ALG6 971632 sc-eQTL 5.77e-01 0.0673 0.12 0.285 gdT L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 8.65e-01 0.0204 0.12 0.285 gdT L2
ENSG00000162434 JAK1 -728547 sc-eQTL 7.20e-01 -0.0433 0.121 0.285 gdT L2
ENSG00000162437 RAVER2 -405888 sc-eQTL 1.90e-01 0.139 0.106 0.285 gdT L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 1.49e-01 -0.17 0.117 0.285 gdT L2
ENSG00000079739 PGM1 745796 sc-eQTL 6.45e-01 -0.0475 0.103 0.28 intMono L2
ENSG00000088035 ALG6 971632 sc-eQTL 9.15e-01 -0.0103 0.096 0.28 intMono L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 5.30e-01 -0.0648 0.103 0.28 intMono L2
ENSG00000162433 AK4 -808342 sc-eQTL 6.03e-01 -0.0474 0.091 0.28 intMono L2
ENSG00000162434 JAK1 -728547 sc-eQTL 8.23e-02 0.146 0.0836 0.28 intMono L2
ENSG00000079739 PGM1 745796 sc-eQTL 9.30e-01 -0.00813 0.0926 0.283 ncMono L2
ENSG00000088035 ALG6 971632 sc-eQTL 4.02e-01 -0.0853 0.102 0.283 ncMono L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 6.36e-01 -0.0464 0.0978 0.283 ncMono L2
ENSG00000162433 AK4 -808342 sc-eQTL 2.29e-01 -0.103 0.085 0.283 ncMono L2
ENSG00000162434 JAK1 -728547 sc-eQTL 2.09e-01 0.0867 0.0688 0.283 ncMono L2
ENSG00000079739 PGM1 745796 sc-eQTL 4.68e-01 0.0826 0.114 0.277 pDC L2
ENSG00000088035 ALG6 971632 sc-eQTL 5.61e-01 -0.0645 0.111 0.277 pDC L2
ENSG00000142856 ITGB3BP 745486 sc-eQTL 6.13e-01 0.0577 0.114 0.277 pDC L2
ENSG00000162433 AK4 -808342 sc-eQTL 9.05e-01 0.00825 0.0688 0.277 pDC L2
ENSG00000162434 JAK1 -728547 sc-eQTL 4.77e-01 0.0654 0.0917 0.277 pDC L2
ENSG00000162437 RAVER2 -405888 sc-eQTL 7.27e-01 0.0362 0.103 0.277 pDC L2
ENSG00000203965 EFCAB7 815835 sc-eQTL 2.27e-01 -0.122 0.1 0.277 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 745796 sc-eQTL 2.31e-02 -0.212 0.0927 0.282 B_Memory LOneK1K
ENSG00000088035 ALG6 971632 sc-eQTL 5.98e-01 -0.0548 0.104 0.282 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 745486 sc-eQTL 2.40e-01 -0.112 0.0954 0.282 B_Memory LOneK1K
ENSG00000162434 JAK1 -728547 sc-eQTL 2.23e-01 -0.0919 0.0753 0.282 B_Memory LOneK1K
ENSG00000203965 EFCAB7 815835 sc-eQTL 6.62e-01 -0.0437 0.0997 0.282 B_Memory LOneK1K
ENSG00000079739 PGM1 745796 sc-eQTL 1.77e-02 -0.233 0.0976 0.282 B_Naive LOneK1K
ENSG00000088035 ALG6 971632 sc-eQTL 1.11e-01 0.162 0.101 0.282 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 745486 sc-eQTL 8.47e-01 0.0199 0.103 0.282 B_Naive LOneK1K
ENSG00000162434 JAK1 -728547 sc-eQTL 7.56e-01 0.0231 0.0744 0.282 B_Naive LOneK1K
ENSG00000203965 EFCAB7 815835 sc-eQTL 8.90e-01 0.0143 0.103 0.282 B_Naive LOneK1K
ENSG00000079739 PGM1 745796 sc-eQTL 8.84e-01 0.0136 0.0933 0.282 CD14_Mono LOneK1K
ENSG00000088035 ALG6 971632 sc-eQTL 4.16e-01 0.0735 0.0902 0.282 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 745486 sc-eQTL 3.83e-02 -0.192 0.0921 0.282 CD14_Mono LOneK1K
ENSG00000162433 AK4 -808342 sc-eQTL 7.66e-01 -0.0274 0.0919 0.282 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -728547 sc-eQTL 6.53e-01 -0.0347 0.0769 0.282 CD14_Mono LOneK1K
ENSG00000079739 PGM1 745796 sc-eQTL 8.33e-01 -0.019 0.0899 0.278 CD16_Mono LOneK1K
ENSG00000088035 ALG6 971632 sc-eQTL 2.77e-01 -0.111 0.102 0.278 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 745486 sc-eQTL 6.93e-01 -0.0394 0.0999 0.278 CD16_Mono LOneK1K
ENSG00000162433 AK4 -808342 sc-eQTL 4.51e-01 -0.0667 0.0884 0.278 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -728547 sc-eQTL 5.61e-02 0.113 0.059 0.278 CD16_Mono LOneK1K
ENSG00000079739 PGM1 745796 sc-eQTL 4.19e-02 -0.159 0.0775 0.28 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 971632 sc-eQTL 6.90e-01 0.0375 0.0939 0.28 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 745486 sc-eQTL 5.24e-01 0.0635 0.0995 0.28 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -728547 sc-eQTL 9.68e-01 0.00191 0.0473 0.28 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 815835 sc-eQTL 9.13e-01 0.012 0.11 0.28 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116652 DLEU2L 792125 eQTL 0.0329 0.0565 0.0264 0.00108 0.0 0.339
ENSG00000162434 JAK1 -627342 eQTL 0.0247 0.0337 0.015 0.00104 0.0 0.339
ENSG00000185483 ROR1 565190 pQTL 0.000352 -0.0505 0.0141 0.0 0.0 0.325

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162433 \N -808342 2.74e-07 1.3e-07 4.47e-08 1.81e-07 9.25e-08 9.76e-08 1.53e-07 5.4e-08 1.44e-07 4.94e-08 1.57e-07 8.68e-08 1.47e-07 6.76e-08 6.02e-08 7.53e-08 3.93e-08 1.27e-07 5.97e-08 4.16e-08 1.19e-07 1.27e-07 1.44e-07 2.93e-08 1.5e-07 1.14e-07 1.07e-07 9.65e-08 1.12e-07 1.07e-07 9.7e-08 3.65e-08 3.96e-08 8e-08 7.36e-08 3.49e-08 5.04e-08 9.23e-08 6.55e-08 3.87e-08 5.13e-08 1.33e-07 5.27e-08 7.78e-09 4.7e-08 1.83e-08 1.21e-07 3.8e-09 5.02e-08
ENSG00000231485 \N -728530 2.8e-07 1.34e-07 4.98e-08 1.9e-07 1.01e-07 9.05e-08 1.67e-07 5.48e-08 1.45e-07 5.67e-08 1.57e-07 1.01e-07 1.69e-07 7.37e-08 6.18e-08 7.49e-08 4.12e-08 1.4e-07 6.75e-08 4.78e-08 1.26e-07 1.26e-07 1.44e-07 3.17e-08 1.65e-07 1.21e-07 1.1e-07 9.74e-08 1.23e-07 1e-07 1.06e-07 2.9e-08 3.59e-08 8.72e-08 4.84e-08 3.14e-08 5.3e-08 8.63e-08 6.57e-08 4.19e-08 5.03e-08 1.46e-07 5.2e-08 1.09e-08 3.42e-08 1.86e-08 1.19e-07 1.88e-09 4.8e-08