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Genes within 1Mb (chr1:64334827:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 741416 sc-eQTL 4.42e-01 -0.0614 0.0797 0.421 B L1
ENSG00000088035 ALG6 967252 sc-eQTL 5.48e-01 0.0497 0.0826 0.421 B L1
ENSG00000142856 ITGB3BP 741106 sc-eQTL 3.82e-01 0.08 0.0913 0.421 B L1
ENSG00000162434 JAK1 -732927 sc-eQTL 4.96e-01 -0.0384 0.0562 0.421 B L1
ENSG00000203965 EFCAB7 811455 sc-eQTL 5.91e-01 0.0503 0.0936 0.421 B L1
ENSG00000079739 PGM1 741416 sc-eQTL 9.58e-01 -0.00365 0.0685 0.421 CD4T L1
ENSG00000088035 ALG6 967252 sc-eQTL 4.65e-01 0.0552 0.0755 0.421 CD4T L1
ENSG00000142856 ITGB3BP 741106 sc-eQTL 5.09e-01 0.058 0.0877 0.421 CD4T L1
ENSG00000158966 CACHD1 -135302 sc-eQTL 7.09e-01 0.0196 0.0523 0.421 CD4T L1
ENSG00000162434 JAK1 -732927 sc-eQTL 3.69e-01 -0.0493 0.0548 0.421 CD4T L1
ENSG00000203965 EFCAB7 811455 sc-eQTL 3.68e-01 0.0709 0.0786 0.421 CD4T L1
ENSG00000079739 PGM1 741416 sc-eQTL 3.46e-01 -0.0715 0.0756 0.421 CD8T L1
ENSG00000088035 ALG6 967252 sc-eQTL 9.92e-01 -0.000864 0.0836 0.421 CD8T L1
ENSG00000142856 ITGB3BP 741106 sc-eQTL 3.75e-01 0.0797 0.0898 0.421 CD8T L1
ENSG00000158966 CACHD1 -135302 sc-eQTL 1.37e-01 -0.0676 0.0453 0.421 CD8T L1
ENSG00000162434 JAK1 -732927 sc-eQTL 4.13e-01 -0.0588 0.0716 0.421 CD8T L1
ENSG00000203965 EFCAB7 811455 sc-eQTL 2.98e-02 0.194 0.0886 0.421 CD8T L1
ENSG00000079739 PGM1 741416 sc-eQTL 3.77e-01 0.0753 0.0852 0.414 DC L1
ENSG00000088035 ALG6 967252 sc-eQTL 3.56e-01 -0.0814 0.0879 0.414 DC L1
ENSG00000142856 ITGB3BP 741106 sc-eQTL 4.38e-01 -0.0766 0.0986 0.414 DC L1
ENSG00000162433 AK4 -812722 sc-eQTL 4.13e-01 0.064 0.0781 0.414 DC L1
ENSG00000162434 JAK1 -732927 sc-eQTL 5.10e-01 0.0429 0.065 0.414 DC L1
ENSG00000162437 RAVER2 -410268 sc-eQTL 7.53e-01 0.0263 0.0833 0.414 DC L1
ENSG00000203965 EFCAB7 811455 sc-eQTL 9.77e-01 -0.00247 0.0859 0.414 DC L1
ENSG00000079739 PGM1 741416 sc-eQTL 4.50e-01 0.0625 0.0826 0.421 Mono L1
ENSG00000088035 ALG6 967252 sc-eQTL 3.94e-01 -0.0736 0.0861 0.421 Mono L1
ENSG00000142856 ITGB3BP 741106 sc-eQTL 8.84e-01 -0.0131 0.0891 0.421 Mono L1
ENSG00000162433 AK4 -812722 sc-eQTL 6.75e-01 0.0353 0.084 0.421 Mono L1
ENSG00000162434 JAK1 -732927 sc-eQTL 9.14e-01 -0.0065 0.0599 0.421 Mono L1
ENSG00000079739 PGM1 741416 sc-eQTL 7.32e-01 -0.0238 0.0694 0.421 NK L1
ENSG00000088035 ALG6 967252 sc-eQTL 9.96e-01 0.000448 0.0815 0.421 NK L1
ENSG00000142856 ITGB3BP 741106 sc-eQTL 6.37e-01 0.0423 0.0895 0.421 NK L1
ENSG00000162434 JAK1 -732927 sc-eQTL 1.87e-01 -0.055 0.0415 0.421 NK L1
ENSG00000203965 EFCAB7 811455 sc-eQTL 3.50e-01 0.0908 0.097 0.421 NK L1
ENSG00000079739 PGM1 741416 sc-eQTL 2.54e-01 0.0905 0.0791 0.421 Other_T L1
ENSG00000088035 ALG6 967252 sc-eQTL 9.41e-02 -0.133 0.0792 0.421 Other_T L1
ENSG00000142856 ITGB3BP 741106 sc-eQTL 1.64e-01 0.0868 0.0622 0.421 Other_T L1
ENSG00000162434 JAK1 -732927 sc-eQTL 5.51e-01 -0.0361 0.0605 0.421 Other_T L1
ENSG00000162437 RAVER2 -410268 sc-eQTL 4.60e-01 0.0649 0.0878 0.421 Other_T L1
ENSG00000203965 EFCAB7 811455 sc-eQTL 2.86e-01 -0.103 0.0961 0.421 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 741416 sc-eQTL 3.99e-01 -0.0882 0.104 0.423 B_Activated L2
ENSG00000088035 ALG6 967252 sc-eQTL 7.05e-01 -0.038 0.1 0.423 B_Activated L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 6.51e-01 0.0434 0.0958 0.423 B_Activated L2
ENSG00000162434 JAK1 -732927 sc-eQTL 7.79e-01 0.0269 0.0957 0.423 B_Activated L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 5.87e-01 -0.0494 0.0907 0.423 B_Activated L2
ENSG00000079739 PGM1 741416 sc-eQTL 8.56e-01 -0.0175 0.096 0.423 B_Intermediate L2
ENSG00000088035 ALG6 967252 sc-eQTL 6.27e-01 0.0474 0.0975 0.423 B_Intermediate L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 6.53e-01 0.0423 0.0939 0.423 B_Intermediate L2
ENSG00000162434 JAK1 -732927 sc-eQTL 9.83e-01 0.00177 0.0811 0.423 B_Intermediate L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 8.42e-01 0.0186 0.093 0.423 B_Intermediate L2
ENSG00000079739 PGM1 741416 sc-eQTL 8.27e-01 -0.0207 0.0946 0.422 B_Memory L2
ENSG00000088035 ALG6 967252 sc-eQTL 6.33e-01 0.046 0.0961 0.422 B_Memory L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 5.68e-01 -0.0561 0.098 0.422 B_Memory L2
ENSG00000162434 JAK1 -732927 sc-eQTL 5.02e-01 -0.0548 0.0814 0.422 B_Memory L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 8.85e-01 -0.014 0.0974 0.422 B_Memory L2
ENSG00000079739 PGM1 741416 sc-eQTL 3.43e-01 -0.0905 0.0952 0.421 B_Naive1 L2
ENSG00000088035 ALG6 967252 sc-eQTL 2.07e-01 0.121 0.0954 0.421 B_Naive1 L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 5.00e-02 0.183 0.0929 0.421 B_Naive1 L2
ENSG00000162434 JAK1 -732927 sc-eQTL 5.29e-01 -0.0457 0.0724 0.421 B_Naive1 L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 1.93e-01 0.13 0.0996 0.421 B_Naive1 L2
ENSG00000079739 PGM1 741416 sc-eQTL 4.76e-01 -0.0667 0.0933 0.423 B_Naive2 L2
ENSG00000088035 ALG6 967252 sc-eQTL 1.86e-01 -0.129 0.097 0.423 B_Naive2 L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 2.54e-01 0.111 0.0975 0.423 B_Naive2 L2
ENSG00000162434 JAK1 -732927 sc-eQTL 3.79e-01 -0.0668 0.0757 0.423 B_Naive2 L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 9.71e-01 0.00354 0.0973 0.423 B_Naive2 L2
ENSG00000079739 PGM1 741416 sc-eQTL 5.54e-01 0.0572 0.0964 0.416 CD4_CTL L2
ENSG00000088035 ALG6 967252 sc-eQTL 2.57e-01 0.116 0.102 0.416 CD4_CTL L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 2.98e-01 -0.103 0.0984 0.416 CD4_CTL L2
ENSG00000158966 CACHD1 -135302 sc-eQTL 1.99e-01 -0.046 0.0357 0.416 CD4_CTL L2
ENSG00000162434 JAK1 -732927 sc-eQTL 1.78e-01 -0.119 0.088 0.416 CD4_CTL L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 1.00e-01 0.154 0.0931 0.416 CD4_CTL L2
ENSG00000079739 PGM1 741416 sc-eQTL 2.36e-01 -0.0913 0.0768 0.421 CD4_Naive L2
ENSG00000088035 ALG6 967252 sc-eQTL 7.92e-01 0.0221 0.0837 0.421 CD4_Naive L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 1.29e-01 0.135 0.0884 0.421 CD4_Naive L2
ENSG00000158966 CACHD1 -135302 sc-eQTL 9.15e-01 0.00564 0.0527 0.421 CD4_Naive L2
ENSG00000162434 JAK1 -732927 sc-eQTL 1.21e-01 -0.0832 0.0534 0.421 CD4_Naive L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 2.67e-01 0.098 0.088 0.421 CD4_Naive L2
ENSG00000079739 PGM1 741416 sc-eQTL 4.08e-01 0.0661 0.0797 0.421 CD4_TCM L2
ENSG00000088035 ALG6 967252 sc-eQTL 3.40e-01 0.0885 0.0925 0.421 CD4_TCM L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 3.74e-01 -0.0839 0.0941 0.421 CD4_TCM L2
ENSG00000158966 CACHD1 -135302 sc-eQTL 3.06e-01 0.0764 0.0745 0.421 CD4_TCM L2
ENSG00000162434 JAK1 -732927 sc-eQTL 8.67e-01 0.0102 0.0611 0.421 CD4_TCM L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 3.52e-01 0.0849 0.0911 0.421 CD4_TCM L2
ENSG00000079739 PGM1 741416 sc-eQTL 6.49e-01 -0.0427 0.0938 0.421 CD4_TEM L2
ENSG00000088035 ALG6 967252 sc-eQTL 7.55e-01 0.0295 0.0943 0.421 CD4_TEM L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 2.38e-01 0.109 0.0919 0.421 CD4_TEM L2
ENSG00000158966 CACHD1 -135302 sc-eQTL 7.10e-01 -0.0212 0.057 0.421 CD4_TEM L2
ENSG00000162434 JAK1 -732927 sc-eQTL 9.67e-01 0.00331 0.081 0.421 CD4_TEM L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 5.12e-01 -0.0626 0.0954 0.421 CD4_TEM L2
ENSG00000079739 PGM1 741416 sc-eQTL 1.94e-01 -0.11 0.0848 0.421 CD8_CTL L2
ENSG00000088035 ALG6 967252 sc-eQTL 2.59e-01 -0.102 0.0902 0.421 CD8_CTL L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 2.83e-01 0.102 0.0948 0.421 CD8_CTL L2
ENSG00000158966 CACHD1 -135302 sc-eQTL 7.41e-01 0.0133 0.0403 0.421 CD8_CTL L2
ENSG00000162434 JAK1 -732927 sc-eQTL 6.87e-01 0.0304 0.0752 0.421 CD8_CTL L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 2.68e-02 0.215 0.0962 0.421 CD8_CTL L2
ENSG00000079739 PGM1 741416 sc-eQTL 4.80e-01 -0.0609 0.0861 0.421 CD8_Naive L2
ENSG00000088035 ALG6 967252 sc-eQTL 5.38e-01 -0.055 0.0892 0.421 CD8_Naive L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 7.70e-01 0.0263 0.0897 0.421 CD8_Naive L2
ENSG00000158966 CACHD1 -135302 sc-eQTL 7.83e-02 -0.109 0.0617 0.421 CD8_Naive L2
ENSG00000162434 JAK1 -732927 sc-eQTL 7.35e-03 -0.199 0.0735 0.421 CD8_Naive L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 7.46e-01 -0.0274 0.0845 0.421 CD8_Naive L2
ENSG00000079739 PGM1 741416 sc-eQTL 6.11e-01 0.0479 0.0938 0.426 CD8_TCM L2
ENSG00000088035 ALG6 967252 sc-eQTL 6.38e-01 0.0448 0.095 0.426 CD8_TCM L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 6.33e-01 0.0441 0.0922 0.426 CD8_TCM L2
ENSG00000158966 CACHD1 -135302 sc-eQTL 7.37e-01 0.0163 0.0484 0.426 CD8_TCM L2
ENSG00000162434 JAK1 -732927 sc-eQTL 3.37e-01 -0.0748 0.0777 0.426 CD8_TCM L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 6.62e-01 0.0411 0.0939 0.426 CD8_TCM L2
ENSG00000079739 PGM1 741416 sc-eQTL 8.39e-01 0.02 0.0981 0.42 CD8_TEM L2
ENSG00000088035 ALG6 967252 sc-eQTL 4.92e-01 0.0678 0.0984 0.42 CD8_TEM L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 1.18e-01 -0.155 0.0988 0.42 CD8_TEM L2
ENSG00000158966 CACHD1 -135302 sc-eQTL 2.97e-02 0.0438 0.02 0.42 CD8_TEM L2
ENSG00000162434 JAK1 -732927 sc-eQTL 6.70e-01 -0.0408 0.0956 0.42 CD8_TEM L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 1.12e-01 0.153 0.0958 0.42 CD8_TEM L2
ENSG00000079739 PGM1 741416 sc-eQTL 6.06e-01 0.047 0.091 0.42 MAIT L2
ENSG00000088035 ALG6 967252 sc-eQTL 8.81e-01 -0.0135 0.0902 0.42 MAIT L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 6.69e-02 0.167 0.0905 0.42 MAIT L2
ENSG00000162434 JAK1 -732927 sc-eQTL 5.22e-01 0.0529 0.0823 0.42 MAIT L2
ENSG00000162437 RAVER2 -410268 sc-eQTL 8.47e-01 0.017 0.0878 0.42 MAIT L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 7.11e-01 0.0349 0.0939 0.42 MAIT L2
ENSG00000079739 PGM1 741416 sc-eQTL 6.83e-01 0.0371 0.0907 0.418 NK_CD56bright L2
ENSG00000088035 ALG6 967252 sc-eQTL 1.24e-02 -0.231 0.0915 0.418 NK_CD56bright L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 6.00e-01 -0.0492 0.0936 0.418 NK_CD56bright L2
ENSG00000162434 JAK1 -732927 sc-eQTL 7.87e-01 -0.016 0.0591 0.418 NK_CD56bright L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 3.37e-01 0.0888 0.0922 0.418 NK_CD56bright L2
ENSG00000079739 PGM1 741416 sc-eQTL 9.10e-01 -0.00824 0.0729 0.42 NK_CD56dim L2
ENSG00000088035 ALG6 967252 sc-eQTL 2.37e-02 0.208 0.0913 0.42 NK_CD56dim L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 4.56e-01 0.0693 0.0928 0.42 NK_CD56dim L2
ENSG00000162434 JAK1 -732927 sc-eQTL 2.12e-01 -0.0612 0.0489 0.42 NK_CD56dim L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 7.91e-01 -0.0266 0.1 0.42 NK_CD56dim L2
ENSG00000079739 PGM1 741416 sc-eQTL 8.86e-01 -0.0142 0.0985 0.425 NK_HLA L2
ENSG00000088035 ALG6 967252 sc-eQTL 8.14e-01 0.024 0.102 0.425 NK_HLA L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 6.50e-01 0.0434 0.0954 0.425 NK_HLA L2
ENSG00000162434 JAK1 -732927 sc-eQTL 9.21e-01 0.00635 0.0638 0.425 NK_HLA L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 7.15e-01 -0.0332 0.0908 0.425 NK_HLA L2
ENSG00000079739 PGM1 741416 sc-eQTL 4.16e-01 -0.064 0.0785 0.42 NK_cytokine L2
ENSG00000088035 ALG6 967252 sc-eQTL 2.82e-01 -0.0956 0.0886 0.42 NK_cytokine L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 5.39e-01 0.0537 0.0871 0.42 NK_cytokine L2
ENSG00000162434 JAK1 -732927 sc-eQTL 1.53e-01 -0.074 0.0516 0.42 NK_cytokine L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 2.83e-01 0.0997 0.0927 0.42 NK_cytokine L2
ENSG00000079739 PGM1 741416 sc-eQTL 2.46e-01 0.132 0.113 0.404 PB L2
ENSG00000088035 ALG6 967252 sc-eQTL 2.19e-01 -0.146 0.119 0.404 PB L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 5.31e-01 0.0697 0.111 0.404 PB L2
ENSG00000162434 JAK1 -732927 sc-eQTL 4.96e-01 -0.0572 0.0836 0.404 PB L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 8.11e-01 0.0292 0.122 0.404 PB L2
ENSG00000079739 PGM1 741416 sc-eQTL 2.58e-01 0.0969 0.0854 0.422 Pro_T L2
ENSG00000088035 ALG6 967252 sc-eQTL 7.24e-01 -0.0308 0.0871 0.422 Pro_T L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 3.68e-01 -0.0691 0.0766 0.422 Pro_T L2
ENSG00000162434 JAK1 -732927 sc-eQTL 7.54e-01 0.019 0.0605 0.422 Pro_T L2
ENSG00000162437 RAVER2 -410268 sc-eQTL 4.38e-01 -0.0619 0.0798 0.422 Pro_T L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 3.45e-01 -0.0843 0.089 0.422 Pro_T L2
ENSG00000079739 PGM1 741416 sc-eQTL 4.12e-01 0.0741 0.0902 0.421 Treg L2
ENSG00000088035 ALG6 967252 sc-eQTL 9.54e-01 0.00564 0.0966 0.421 Treg L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 4.12e-02 -0.193 0.0939 0.421 Treg L2
ENSG00000158966 CACHD1 -135302 sc-eQTL 1.57e-02 0.172 0.0707 0.421 Treg L2
ENSG00000162434 JAK1 -732927 sc-eQTL 9.66e-01 -0.0033 0.0763 0.421 Treg L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 7.73e-01 0.0262 0.0907 0.421 Treg L2
ENSG00000079739 PGM1 741416 sc-eQTL 8.59e-01 0.0165 0.0931 0.422 cDC L2
ENSG00000088035 ALG6 967252 sc-eQTL 7.43e-01 -0.031 0.0944 0.422 cDC L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 2.04e-01 -0.13 0.101 0.422 cDC L2
ENSG00000162433 AK4 -812722 sc-eQTL 5.09e-01 0.0562 0.085 0.422 cDC L2
ENSG00000162434 JAK1 -732927 sc-eQTL 6.71e-01 -0.0338 0.0794 0.422 cDC L2
ENSG00000162437 RAVER2 -410268 sc-eQTL 3.28e-01 0.0853 0.0871 0.422 cDC L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 3.91e-01 0.0703 0.0817 0.422 cDC L2
ENSG00000079739 PGM1 741416 sc-eQTL 7.91e-01 0.0232 0.0872 0.421 cMono_IL1B L2
ENSG00000088035 ALG6 967252 sc-eQTL 2.37e-01 -0.103 0.0871 0.421 cMono_IL1B L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 2.06e-01 0.116 0.0914 0.421 cMono_IL1B L2
ENSG00000162433 AK4 -812722 sc-eQTL 7.05e-01 0.0327 0.0863 0.421 cMono_IL1B L2
ENSG00000162434 JAK1 -732927 sc-eQTL 3.22e-01 -0.0777 0.0783 0.421 cMono_IL1B L2
ENSG00000079739 PGM1 741416 sc-eQTL 6.59e-01 0.0419 0.0949 0.421 cMono_S100A L2
ENSG00000088035 ALG6 967252 sc-eQTL 9.63e-01 0.00441 0.0962 0.421 cMono_S100A L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 2.96e-01 -0.0911 0.0869 0.421 cMono_S100A L2
ENSG00000162433 AK4 -812722 sc-eQTL 4.15e-01 0.0703 0.0859 0.421 cMono_S100A L2
ENSG00000162434 JAK1 -732927 sc-eQTL 5.15e-01 0.0518 0.0794 0.421 cMono_S100A L2
ENSG00000079739 PGM1 741416 sc-eQTL 3.62e-01 0.0958 0.105 0.439 gdT L2
ENSG00000088035 ALG6 967252 sc-eQTL 3.20e-01 -0.111 0.112 0.439 gdT L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 7.80e-01 -0.0311 0.111 0.439 gdT L2
ENSG00000162434 JAK1 -732927 sc-eQTL 3.18e-02 -0.239 0.11 0.439 gdT L2
ENSG00000162437 RAVER2 -410268 sc-eQTL 6.07e-01 0.0509 0.0985 0.439 gdT L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 1.68e-02 -0.26 0.108 0.439 gdT L2
ENSG00000079739 PGM1 741416 sc-eQTL 3.75e-01 -0.086 0.0968 0.416 intMono L2
ENSG00000088035 ALG6 967252 sc-eQTL 7.24e-01 0.0319 0.0903 0.416 intMono L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 3.73e-01 -0.0865 0.0968 0.416 intMono L2
ENSG00000162433 AK4 -812722 sc-eQTL 5.64e-01 0.0495 0.0855 0.416 intMono L2
ENSG00000162434 JAK1 -732927 sc-eQTL 4.57e-01 0.0589 0.0791 0.416 intMono L2
ENSG00000079739 PGM1 741416 sc-eQTL 8.17e-01 0.02 0.0865 0.423 ncMono L2
ENSG00000088035 ALG6 967252 sc-eQTL 1.51e-01 -0.136 0.0945 0.423 ncMono L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 4.85e-01 0.0639 0.0913 0.423 ncMono L2
ENSG00000162433 AK4 -812722 sc-eQTL 9.18e-02 -0.134 0.0791 0.423 ncMono L2
ENSG00000162434 JAK1 -732927 sc-eQTL 8.25e-01 0.0143 0.0645 0.423 ncMono L2
ENSG00000079739 PGM1 741416 sc-eQTL 1.97e-01 0.142 0.109 0.427 pDC L2
ENSG00000088035 ALG6 967252 sc-eQTL 1.72e-02 -0.253 0.105 0.427 pDC L2
ENSG00000142856 ITGB3BP 741106 sc-eQTL 7.76e-01 0.0315 0.11 0.427 pDC L2
ENSG00000162433 AK4 -812722 sc-eQTL 6.30e-01 -0.0321 0.0664 0.427 pDC L2
ENSG00000162434 JAK1 -732927 sc-eQTL 2.13e-01 0.111 0.0883 0.427 pDC L2
ENSG00000162437 RAVER2 -410268 sc-eQTL 3.86e-01 -0.0868 0.0998 0.427 pDC L2
ENSG00000203965 EFCAB7 811455 sc-eQTL 2.19e-01 -0.12 0.0971 0.427 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 741416 sc-eQTL 6.62e-01 -0.039 0.0891 0.421 B_Memory LOneK1K
ENSG00000088035 ALG6 967252 sc-eQTL 6.71e-01 0.0419 0.0985 0.421 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 741106 sc-eQTL 7.90e-01 -0.0242 0.0909 0.421 B_Memory LOneK1K
ENSG00000162434 JAK1 -732927 sc-eQTL 5.57e-01 -0.0421 0.0717 0.421 B_Memory LOneK1K
ENSG00000203965 EFCAB7 811455 sc-eQTL 8.84e-01 0.0138 0.0947 0.421 B_Memory LOneK1K
ENSG00000079739 PGM1 741416 sc-eQTL 1.76e-01 -0.126 0.0924 0.421 B_Naive LOneK1K
ENSG00000088035 ALG6 967252 sc-eQTL 8.78e-01 0.0147 0.0955 0.421 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 741106 sc-eQTL 3.38e-02 0.203 0.0952 0.421 B_Naive LOneK1K
ENSG00000162434 JAK1 -732927 sc-eQTL 3.46e-01 -0.0658 0.0697 0.421 B_Naive LOneK1K
ENSG00000203965 EFCAB7 811455 sc-eQTL 1.95e-01 0.125 0.0964 0.421 B_Naive LOneK1K
ENSG00000079739 PGM1 741416 sc-eQTL 4.59e-01 0.0658 0.0887 0.421 CD14_Mono LOneK1K
ENSG00000088035 ALG6 967252 sc-eQTL 2.38e-01 -0.102 0.0858 0.421 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 741106 sc-eQTL 8.39e-01 0.018 0.0886 0.421 CD14_Mono LOneK1K
ENSG00000162433 AK4 -812722 sc-eQTL 7.70e-01 0.0257 0.0875 0.421 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -732927 sc-eQTL 7.02e-01 -0.028 0.0733 0.421 CD14_Mono LOneK1K
ENSG00000079739 PGM1 741416 sc-eQTL 9.11e-01 0.00938 0.0834 0.42 CD16_Mono LOneK1K
ENSG00000088035 ALG6 967252 sc-eQTL 4.48e-01 -0.0719 0.0945 0.42 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 741106 sc-eQTL 9.42e-01 -0.00674 0.0927 0.42 CD16_Mono LOneK1K
ENSG00000162433 AK4 -812722 sc-eQTL 7.80e-01 -0.023 0.0821 0.42 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -732927 sc-eQTL 5.74e-01 0.0311 0.0552 0.42 CD16_Mono LOneK1K
ENSG00000079739 PGM1 741416 sc-eQTL 6.03e-01 -0.0371 0.0713 0.42 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 967252 sc-eQTL 3.49e-01 0.0802 0.0855 0.42 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 741106 sc-eQTL 2.62e-01 0.102 0.0905 0.42 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -732927 sc-eQTL 1.89e-01 -0.0565 0.0429 0.42 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 811455 sc-eQTL 6.96e-01 0.0392 0.1 0.42 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162434 JAK1 -631722 eQTL 0.0208 0.0334 0.0144 0.00158 0.0 0.474
ENSG00000185483 ROR1 560810 pQTL 1.18e-05 -0.058 0.0132 0.0 0.0 0.462

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000231485 \N -732910 2.67e-07 1.35e-07 5.03e-08 1.97e-07 1.01e-07 9.05e-08 1.67e-07 5.43e-08 1.47e-07 6.4e-08 1.57e-07 1.05e-07 1.69e-07 7.37e-08 6.25e-08 7.23e-08 4.12e-08 1.4e-07 6.32e-08 4.8e-08 1.25e-07 1.25e-07 1.5e-07 2.87e-08 1.65e-07 1.26e-07 1.13e-07 1.01e-07 1.22e-07 9.88e-08 1.06e-07 2.96e-08 3.96e-08 8.89e-08 3.63e-08 2.99e-08 5.58e-08 8.68e-08 6.67e-08 4.19e-08 5.44e-08 1.46e-07 5.21e-08 1.1e-08 3.81e-08 1.77e-08 1.2e-07 1.9e-09 5e-08