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Genes within 1Mb (chr1:64331566:G:GA):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 738155 sc-eQTL 1.46e-02 0.207 0.0841 0.722 B L1
ENSG00000088035 ALG6 963991 sc-eQTL 1.91e-01 -0.115 0.0881 0.722 B L1
ENSG00000142856 ITGB3BP 737845 sc-eQTL 4.23e-01 0.0784 0.0976 0.722 B L1
ENSG00000162434 JAK1 -736188 sc-eQTL 7.25e-01 0.0212 0.0602 0.722 B L1
ENSG00000203965 EFCAB7 808194 sc-eQTL 5.35e-01 0.0622 0.1 0.722 B L1
ENSG00000079739 PGM1 738155 sc-eQTL 1.25e-01 0.113 0.0732 0.722 CD4T L1
ENSG00000088035 ALG6 963991 sc-eQTL 8.50e-01 -0.0154 0.0812 0.722 CD4T L1
ENSG00000142856 ITGB3BP 737845 sc-eQTL 3.44e-01 0.0892 0.0941 0.722 CD4T L1
ENSG00000158966 CACHD1 -138563 sc-eQTL 2.79e-01 -0.0609 0.0561 0.722 CD4T L1
ENSG00000162434 JAK1 -736188 sc-eQTL 4.16e-01 -0.0479 0.0589 0.722 CD4T L1
ENSG00000203965 EFCAB7 808194 sc-eQTL 5.27e-01 -0.0536 0.0845 0.722 CD4T L1
ENSG00000079739 PGM1 738155 sc-eQTL 5.23e-03 0.225 0.0797 0.722 CD8T L1
ENSG00000088035 ALG6 963991 sc-eQTL 2.00e-01 0.115 0.0891 0.722 CD8T L1
ENSG00000142856 ITGB3BP 737845 sc-eQTL 9.07e-01 -0.0113 0.0963 0.722 CD8T L1
ENSG00000158966 CACHD1 -138563 sc-eQTL 7.07e-01 0.0183 0.0487 0.722 CD8T L1
ENSG00000162434 JAK1 -736188 sc-eQTL 1.59e-01 -0.108 0.0764 0.722 CD8T L1
ENSG00000203965 EFCAB7 808194 sc-eQTL 3.77e-01 -0.0849 0.0958 0.722 CD8T L1
ENSG00000079739 PGM1 738155 sc-eQTL 6.99e-01 -0.0355 0.0916 0.727 DC L1
ENSG00000088035 ALG6 963991 sc-eQTL 7.94e-01 0.0248 0.0946 0.727 DC L1
ENSG00000142856 ITGB3BP 737845 sc-eQTL 1.98e-01 0.136 0.106 0.727 DC L1
ENSG00000162433 AK4 -815983 sc-eQTL 4.66e-01 0.0612 0.0839 0.727 DC L1
ENSG00000162434 JAK1 -736188 sc-eQTL 5.06e-01 -0.0465 0.0698 0.727 DC L1
ENSG00000162437 RAVER2 -413529 sc-eQTL 3.11e-01 -0.0906 0.0893 0.727 DC L1
ENSG00000203965 EFCAB7 808194 sc-eQTL 1.35e-01 0.138 0.0918 0.727 DC L1
ENSG00000079739 PGM1 738155 sc-eQTL 8.98e-01 -0.0113 0.0886 0.722 Mono L1
ENSG00000088035 ALG6 963991 sc-eQTL 3.70e-01 -0.0828 0.0923 0.722 Mono L1
ENSG00000142856 ITGB3BP 737845 sc-eQTL 8.70e-02 0.163 0.0948 0.722 Mono L1
ENSG00000162433 AK4 -815983 sc-eQTL 8.49e-01 0.0172 0.09 0.722 Mono L1
ENSG00000162434 JAK1 -736188 sc-eQTL 8.49e-01 -0.0122 0.0642 0.722 Mono L1
ENSG00000079739 PGM1 738155 sc-eQTL 8.08e-02 0.133 0.0759 0.723 NK L1
ENSG00000088035 ALG6 963991 sc-eQTL 9.61e-01 0.00436 0.0896 0.723 NK L1
ENSG00000142856 ITGB3BP 737845 sc-eQTL 6.39e-01 -0.0462 0.0985 0.723 NK L1
ENSG00000162434 JAK1 -736188 sc-eQTL 8.84e-01 0.00668 0.0459 0.723 NK L1
ENSG00000203965 EFCAB7 808194 sc-eQTL 5.45e-01 -0.0648 0.107 0.723 NK L1
ENSG00000079739 PGM1 738155 sc-eQTL 4.53e-01 -0.0647 0.0861 0.722 Other_T L1
ENSG00000088035 ALG6 963991 sc-eQTL 1.47e-01 0.125 0.0862 0.722 Other_T L1
ENSG00000142856 ITGB3BP 737845 sc-eQTL 1.08e-01 -0.109 0.0675 0.722 Other_T L1
ENSG00000162434 JAK1 -736188 sc-eQTL 5.93e-01 0.0352 0.0657 0.722 Other_T L1
ENSG00000162437 RAVER2 -413529 sc-eQTL 3.14e-01 0.0963 0.0954 0.722 Other_T L1
ENSG00000203965 EFCAB7 808194 sc-eQTL 3.47e-01 0.0985 0.105 0.722 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 738155 sc-eQTL 9.30e-03 0.301 0.115 0.724 B_Activated L2
ENSG00000088035 ALG6 963991 sc-eQTL 3.26e-01 -0.11 0.112 0.724 B_Activated L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 7.58e-01 0.0331 0.107 0.724 B_Activated L2
ENSG00000162434 JAK1 -736188 sc-eQTL 6.43e-01 -0.0497 0.107 0.724 B_Activated L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 7.82e-01 0.0282 0.101 0.724 B_Activated L2
ENSG00000079739 PGM1 738155 sc-eQTL 2.22e-01 0.126 0.103 0.721 B_Intermediate L2
ENSG00000088035 ALG6 963991 sc-eQTL 9.95e-01 -0.000606 0.105 0.721 B_Intermediate L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 4.84e-01 0.0706 0.101 0.721 B_Intermediate L2
ENSG00000162434 JAK1 -736188 sc-eQTL 9.16e-01 -0.0092 0.087 0.721 B_Intermediate L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 4.59e-01 0.074 0.0997 0.721 B_Intermediate L2
ENSG00000079739 PGM1 738155 sc-eQTL 5.72e-02 0.19 0.0993 0.722 B_Memory L2
ENSG00000088035 ALG6 963991 sc-eQTL 5.15e-01 0.0664 0.102 0.722 B_Memory L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 1.77e-01 0.14 0.103 0.722 B_Memory L2
ENSG00000162434 JAK1 -736188 sc-eQTL 5.16e-02 0.167 0.0855 0.722 B_Memory L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 8.84e-01 0.0151 0.103 0.722 B_Memory L2
ENSG00000079739 PGM1 738155 sc-eQTL 9.79e-02 0.17 0.102 0.722 B_Naive1 L2
ENSG00000088035 ALG6 963991 sc-eQTL 1.88e-01 -0.136 0.103 0.722 B_Naive1 L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 6.48e-01 -0.0461 0.101 0.722 B_Naive1 L2
ENSG00000162434 JAK1 -736188 sc-eQTL 8.23e-01 -0.0175 0.0781 0.722 B_Naive1 L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 8.76e-01 0.0169 0.108 0.722 B_Naive1 L2
ENSG00000079739 PGM1 738155 sc-eQTL 1.89e-01 0.132 0.1 0.721 B_Naive2 L2
ENSG00000088035 ALG6 963991 sc-eQTL 4.64e-01 -0.077 0.105 0.721 B_Naive2 L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 8.65e-01 0.018 0.106 0.721 B_Naive2 L2
ENSG00000162434 JAK1 -736188 sc-eQTL 9.20e-01 -0.00828 0.0819 0.721 B_Naive2 L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 7.45e-01 -0.0342 0.105 0.721 B_Naive2 L2
ENSG00000079739 PGM1 738155 sc-eQTL 8.16e-01 0.0241 0.103 0.73 CD4_CTL L2
ENSG00000088035 ALG6 963991 sc-eQTL 7.77e-01 -0.031 0.109 0.73 CD4_CTL L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 9.90e-01 0.00139 0.106 0.73 CD4_CTL L2
ENSG00000158966 CACHD1 -138563 sc-eQTL 6.19e-01 0.0191 0.0384 0.73 CD4_CTL L2
ENSG00000162434 JAK1 -736188 sc-eQTL 5.35e-01 0.0589 0.0948 0.73 CD4_CTL L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 4.17e-02 -0.204 0.0995 0.73 CD4_CTL L2
ENSG00000079739 PGM1 738155 sc-eQTL 3.95e-02 0.169 0.0818 0.722 CD4_Naive L2
ENSG00000088035 ALG6 963991 sc-eQTL 5.31e-01 0.0562 0.0896 0.722 CD4_Naive L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 8.44e-01 0.0187 0.0952 0.722 CD4_Naive L2
ENSG00000158966 CACHD1 -138563 sc-eQTL 3.76e-01 -0.05 0.0563 0.722 CD4_Naive L2
ENSG00000162434 JAK1 -736188 sc-eQTL 9.70e-01 -0.0022 0.0576 0.722 CD4_Naive L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 3.63e-01 -0.086 0.0944 0.722 CD4_Naive L2
ENSG00000079739 PGM1 738155 sc-eQTL 2.75e-01 0.0934 0.0853 0.722 CD4_TCM L2
ENSG00000088035 ALG6 963991 sc-eQTL 6.38e-01 -0.0468 0.0993 0.722 CD4_TCM L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 1.37e-01 0.15 0.101 0.722 CD4_TCM L2
ENSG00000158966 CACHD1 -138563 sc-eQTL 2.92e-01 -0.0843 0.0799 0.722 CD4_TCM L2
ENSG00000162434 JAK1 -736188 sc-eQTL 2.05e-01 -0.083 0.0653 0.722 CD4_TCM L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 5.97e-01 0.0517 0.0977 0.722 CD4_TCM L2
ENSG00000079739 PGM1 738155 sc-eQTL 9.67e-01 0.00423 0.101 0.722 CD4_TEM L2
ENSG00000088035 ALG6 963991 sc-eQTL 6.35e-01 -0.0484 0.102 0.722 CD4_TEM L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 7.79e-01 -0.028 0.0996 0.722 CD4_TEM L2
ENSG00000158966 CACHD1 -138563 sc-eQTL 1.68e-01 0.0848 0.0613 0.722 CD4_TEM L2
ENSG00000162434 JAK1 -736188 sc-eQTL 2.13e-01 -0.109 0.0873 0.722 CD4_TEM L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 6.82e-01 0.0424 0.103 0.722 CD4_TEM L2
ENSG00000079739 PGM1 738155 sc-eQTL 6.32e-02 0.17 0.0912 0.722 CD8_CTL L2
ENSG00000088035 ALG6 963991 sc-eQTL 8.71e-02 0.167 0.0971 0.722 CD8_CTL L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 7.84e-01 -0.0282 0.103 0.722 CD8_CTL L2
ENSG00000158966 CACHD1 -138563 sc-eQTL 2.20e-01 -0.0533 0.0434 0.722 CD8_CTL L2
ENSG00000162434 JAK1 -736188 sc-eQTL 4.13e-01 -0.0666 0.0812 0.722 CD8_CTL L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 2.04e-01 -0.134 0.105 0.722 CD8_CTL L2
ENSG00000079739 PGM1 738155 sc-eQTL 7.28e-02 0.167 0.0924 0.722 CD8_Naive L2
ENSG00000088035 ALG6 963991 sc-eQTL 5.89e-02 0.182 0.0956 0.722 CD8_Naive L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 8.49e-01 0.0184 0.0969 0.722 CD8_Naive L2
ENSG00000158966 CACHD1 -138563 sc-eQTL 6.48e-01 0.0307 0.0671 0.722 CD8_Naive L2
ENSG00000162434 JAK1 -736188 sc-eQTL 9.00e-01 0.0102 0.0808 0.722 CD8_Naive L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 6.81e-01 0.0376 0.0913 0.722 CD8_Naive L2
ENSG00000079739 PGM1 738155 sc-eQTL 9.18e-01 0.0105 0.102 0.718 CD8_TCM L2
ENSG00000088035 ALG6 963991 sc-eQTL 9.09e-01 0.0118 0.103 0.718 CD8_TCM L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 5.14e-01 -0.0651 0.0996 0.718 CD8_TCM L2
ENSG00000158966 CACHD1 -138563 sc-eQTL 8.18e-01 -0.0121 0.0524 0.718 CD8_TCM L2
ENSG00000162434 JAK1 -736188 sc-eQTL 8.68e-01 0.014 0.0843 0.718 CD8_TCM L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 7.22e-01 0.0362 0.102 0.718 CD8_TCM L2
ENSG00000079739 PGM1 738155 sc-eQTL 5.00e-01 0.0714 0.105 0.726 CD8_TEM L2
ENSG00000088035 ALG6 963991 sc-eQTL 6.60e-01 0.0467 0.106 0.726 CD8_TEM L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 4.18e-02 0.217 0.106 0.726 CD8_TEM L2
ENSG00000158966 CACHD1 -138563 sc-eQTL 2.89e-01 -0.0231 0.0217 0.726 CD8_TEM L2
ENSG00000162434 JAK1 -736188 sc-eQTL 5.89e-01 -0.0557 0.103 0.726 CD8_TEM L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 6.55e-01 -0.0463 0.104 0.726 CD8_TEM L2
ENSG00000079739 PGM1 738155 sc-eQTL 7.77e-01 -0.0279 0.0986 0.725 MAIT L2
ENSG00000088035 ALG6 963991 sc-eQTL 6.87e-01 0.0394 0.0976 0.725 MAIT L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 7.10e-02 -0.178 0.0981 0.725 MAIT L2
ENSG00000162434 JAK1 -736188 sc-eQTL 8.27e-01 0.0196 0.0893 0.725 MAIT L2
ENSG00000162437 RAVER2 -413529 sc-eQTL 8.86e-02 0.162 0.0945 0.725 MAIT L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 6.88e-01 -0.0409 0.102 0.725 MAIT L2
ENSG00000079739 PGM1 738155 sc-eQTL 8.22e-01 -0.0224 0.0993 0.718 NK_CD56bright L2
ENSG00000088035 ALG6 963991 sc-eQTL 1.93e-01 0.132 0.101 0.718 NK_CD56bright L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 7.75e-01 0.0294 0.103 0.718 NK_CD56bright L2
ENSG00000162434 JAK1 -736188 sc-eQTL 6.13e-01 0.0328 0.0646 0.718 NK_CD56bright L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 8.63e-01 -0.0175 0.101 0.718 NK_CD56bright L2
ENSG00000079739 PGM1 738155 sc-eQTL 1.05e-01 0.13 0.0801 0.722 NK_CD56dim L2
ENSG00000088035 ALG6 963991 sc-eQTL 8.88e-02 -0.174 0.102 0.722 NK_CD56dim L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 4.76e-01 -0.0733 0.103 0.722 NK_CD56dim L2
ENSG00000162434 JAK1 -736188 sc-eQTL 9.46e-01 -0.00369 0.0543 0.722 NK_CD56dim L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 3.49e-01 0.104 0.111 0.722 NK_CD56dim L2
ENSG00000079739 PGM1 738155 sc-eQTL 4.77e-01 0.075 0.105 0.712 NK_HLA L2
ENSG00000088035 ALG6 963991 sc-eQTL 9.92e-01 0.00104 0.109 0.712 NK_HLA L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 5.46e-01 -0.0617 0.102 0.712 NK_HLA L2
ENSG00000162434 JAK1 -736188 sc-eQTL 6.31e-01 0.0328 0.0683 0.712 NK_HLA L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 6.91e-01 0.0388 0.0973 0.712 NK_HLA L2
ENSG00000079739 PGM1 738155 sc-eQTL 1.18e-01 0.134 0.0851 0.722 NK_cytokine L2
ENSG00000088035 ALG6 963991 sc-eQTL 3.38e-01 0.0927 0.0966 0.722 NK_cytokine L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 8.82e-01 0.0141 0.095 0.722 NK_cytokine L2
ENSG00000162434 JAK1 -736188 sc-eQTL 5.81e-01 0.0313 0.0565 0.722 NK_cytokine L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 1.64e-01 -0.141 0.101 0.722 NK_cytokine L2
ENSG00000079739 PGM1 738155 sc-eQTL 6.13e-01 -0.0635 0.125 0.722 PB L2
ENSG00000088035 ALG6 963991 sc-eQTL 7.94e-01 -0.0344 0.132 0.722 PB L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 4.33e-01 -0.0961 0.122 0.722 PB L2
ENSG00000162434 JAK1 -736188 sc-eQTL 6.82e-01 0.038 0.0924 0.722 PB L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 6.32e-01 0.0645 0.134 0.722 PB L2
ENSG00000079739 PGM1 738155 sc-eQTL 7.19e-01 -0.0339 0.094 0.72 Pro_T L2
ENSG00000088035 ALG6 963991 sc-eQTL 6.50e-01 0.0435 0.0956 0.72 Pro_T L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 8.97e-01 0.0109 0.0843 0.72 Pro_T L2
ENSG00000162434 JAK1 -736188 sc-eQTL 9.09e-01 -0.00757 0.0665 0.72 Pro_T L2
ENSG00000162437 RAVER2 -413529 sc-eQTL 4.43e-01 0.0674 0.0876 0.72 Pro_T L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 2.83e-02 0.214 0.0968 0.72 Pro_T L2
ENSG00000079739 PGM1 738155 sc-eQTL 8.65e-01 0.0165 0.0971 0.722 Treg L2
ENSG00000088035 ALG6 963991 sc-eQTL 4.65e-01 -0.076 0.104 0.722 Treg L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 1.52e-02 0.246 0.101 0.722 Treg L2
ENSG00000158966 CACHD1 -138563 sc-eQTL 1.64e-03 -0.24 0.0752 0.722 Treg L2
ENSG00000162434 JAK1 -736188 sc-eQTL 5.51e-01 -0.049 0.082 0.722 Treg L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 6.77e-01 -0.0406 0.0975 0.722 Treg L2
ENSG00000079739 PGM1 738155 sc-eQTL 9.30e-01 0.00877 0.1 0.722 cDC L2
ENSG00000088035 ALG6 963991 sc-eQTL 8.15e-01 -0.0237 0.101 0.722 cDC L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 2.32e-02 0.248 0.108 0.722 cDC L2
ENSG00000162433 AK4 -815983 sc-eQTL 1.20e-01 0.142 0.091 0.722 cDC L2
ENSG00000162434 JAK1 -736188 sc-eQTL 7.34e-01 -0.0291 0.0854 0.722 cDC L2
ENSG00000162437 RAVER2 -413529 sc-eQTL 5.98e-01 -0.0496 0.0938 0.722 cDC L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 3.77e-01 0.0779 0.0879 0.722 cDC L2
ENSG00000079739 PGM1 738155 sc-eQTL 6.16e-01 0.0468 0.0931 0.722 cMono_IL1B L2
ENSG00000088035 ALG6 963991 sc-eQTL 4.06e-01 -0.0775 0.0931 0.722 cMono_IL1B L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 3.12e-01 0.0991 0.0977 0.722 cMono_IL1B L2
ENSG00000162433 AK4 -815983 sc-eQTL 5.74e-01 -0.0518 0.0921 0.722 cMono_IL1B L2
ENSG00000162434 JAK1 -736188 sc-eQTL 7.86e-01 0.0227 0.0838 0.722 cMono_IL1B L2
ENSG00000079739 PGM1 738155 sc-eQTL 8.50e-01 -0.0194 0.103 0.722 cMono_S100A L2
ENSG00000088035 ALG6 963991 sc-eQTL 1.74e-01 -0.141 0.103 0.722 cMono_S100A L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 5.94e-02 0.177 0.0933 0.722 cMono_S100A L2
ENSG00000162433 AK4 -815983 sc-eQTL 8.45e-01 0.0182 0.093 0.722 cMono_S100A L2
ENSG00000162434 JAK1 -736188 sc-eQTL 9.14e-01 -0.00932 0.0858 0.722 cMono_S100A L2
ENSG00000079739 PGM1 738155 sc-eQTL 6.99e-01 -0.0439 0.113 0.715 gdT L2
ENSG00000088035 ALG6 963991 sc-eQTL 5.77e-01 -0.0673 0.12 0.715 gdT L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 8.65e-01 -0.0204 0.12 0.715 gdT L2
ENSG00000162434 JAK1 -736188 sc-eQTL 7.20e-01 0.0433 0.121 0.715 gdT L2
ENSG00000162437 RAVER2 -413529 sc-eQTL 1.90e-01 -0.139 0.106 0.715 gdT L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 1.49e-01 0.17 0.117 0.715 gdT L2
ENSG00000079739 PGM1 738155 sc-eQTL 5.55e-01 0.0611 0.103 0.722 intMono L2
ENSG00000088035 ALG6 963991 sc-eQTL 9.22e-01 0.0094 0.0962 0.722 intMono L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 6.31e-01 0.0497 0.103 0.722 intMono L2
ENSG00000162433 AK4 -815983 sc-eQTL 6.26e-01 0.0445 0.0912 0.722 intMono L2
ENSG00000162434 JAK1 -736188 sc-eQTL 8.56e-02 -0.145 0.0838 0.722 intMono L2
ENSG00000079739 PGM1 738155 sc-eQTL 9.34e-01 0.0077 0.0923 0.719 ncMono L2
ENSG00000088035 ALG6 963991 sc-eQTL 4.52e-01 0.0763 0.101 0.719 ncMono L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 6.34e-01 0.0465 0.0975 0.719 ncMono L2
ENSG00000162433 AK4 -815983 sc-eQTL 2.61e-01 0.0956 0.0848 0.719 ncMono L2
ENSG00000162434 JAK1 -736188 sc-eQTL 1.68e-01 -0.0949 0.0685 0.719 ncMono L2
ENSG00000079739 PGM1 738155 sc-eQTL 4.68e-01 -0.0826 0.114 0.723 pDC L2
ENSG00000088035 ALG6 963991 sc-eQTL 5.61e-01 0.0645 0.111 0.723 pDC L2
ENSG00000142856 ITGB3BP 737845 sc-eQTL 6.13e-01 -0.0577 0.114 0.723 pDC L2
ENSG00000162433 AK4 -815983 sc-eQTL 9.05e-01 -0.00825 0.0688 0.723 pDC L2
ENSG00000162434 JAK1 -736188 sc-eQTL 4.77e-01 -0.0654 0.0917 0.723 pDC L2
ENSG00000162437 RAVER2 -413529 sc-eQTL 7.27e-01 -0.0362 0.103 0.723 pDC L2
ENSG00000203965 EFCAB7 808194 sc-eQTL 2.27e-01 0.122 0.1 0.723 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 738155 sc-eQTL 1.55e-02 0.228 0.0935 0.722 B_Memory LOneK1K
ENSG00000088035 ALG6 963991 sc-eQTL 6.96e-01 0.041 0.105 0.722 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 737845 sc-eQTL 1.95e-01 0.125 0.0963 0.722 B_Memory LOneK1K
ENSG00000162434 JAK1 -736188 sc-eQTL 1.85e-01 0.101 0.076 0.722 B_Memory LOneK1K
ENSG00000203965 EFCAB7 808194 sc-eQTL 7.17e-01 0.0365 0.101 0.722 B_Memory LOneK1K
ENSG00000079739 PGM1 738155 sc-eQTL 2.99e-02 0.216 0.0987 0.722 B_Naive LOneK1K
ENSG00000088035 ALG6 963991 sc-eQTL 1.80e-01 -0.138 0.102 0.722 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 737845 sc-eQTL 7.46e-01 -0.0336 0.104 0.722 B_Naive LOneK1K
ENSG00000162434 JAK1 -736188 sc-eQTL 7.38e-01 -0.0251 0.0751 0.722 B_Naive LOneK1K
ENSG00000203965 EFCAB7 808194 sc-eQTL 9.57e-01 -0.00568 0.104 0.722 B_Naive LOneK1K
ENSG00000079739 PGM1 738155 sc-eQTL 8.39e-01 -0.0192 0.0944 0.722 CD14_Mono LOneK1K
ENSG00000088035 ALG6 963991 sc-eQTL 2.73e-01 -0.1 0.0911 0.722 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 737845 sc-eQTL 4.74e-02 0.186 0.0933 0.722 CD14_Mono LOneK1K
ENSG00000162433 AK4 -815983 sc-eQTL 8.53e-01 0.0172 0.093 0.722 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -736188 sc-eQTL 7.87e-01 0.0211 0.0778 0.722 CD14_Mono LOneK1K
ENSG00000079739 PGM1 738155 sc-eQTL 7.23e-01 0.0319 0.0899 0.724 CD16_Mono LOneK1K
ENSG00000088035 ALG6 963991 sc-eQTL 3.19e-01 0.102 0.102 0.724 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 737845 sc-eQTL 7.53e-01 0.0315 0.0999 0.724 CD16_Mono LOneK1K
ENSG00000162433 AK4 -815983 sc-eQTL 5.13e-01 0.0579 0.0884 0.724 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -736188 sc-eQTL 4.70e-02 -0.118 0.059 0.724 CD16_Mono LOneK1K
ENSG00000079739 PGM1 738155 sc-eQTL 5.65e-02 0.149 0.0776 0.722 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 963991 sc-eQTL 5.69e-01 -0.0536 0.094 0.722 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 737845 sc-eQTL 4.36e-01 -0.0777 0.0995 0.722 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -736188 sc-eQTL 9.37e-01 -0.00374 0.0473 0.722 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 808194 sc-eQTL 8.06e-01 -0.027 0.11 0.722 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116652 DLEU2L 784484 eQTL 0.0226 -0.0602 0.0264 0.00127 0.0 0.338
ENSG00000162434 JAK1 -634983 eQTL 0.0323 -0.0321 0.015 0.0 0.0 0.338
ENSG00000185483 ROR1 557549 pQTL 0.000377 0.0502 0.0141 0.0 0.0 0.323

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162433 \N -815983 2.74e-07 1.11e-07 5.14e-08 1.82e-07 9.02e-08 9.76e-08 1.49e-07 5.24e-08 1.45e-07 4.24e-08 1.55e-07 8.14e-08 2.05e-07 7.64e-08 5.44e-08 7.3e-08 4.63e-08 1.33e-07 5.22e-08 2.85e-08 1.05e-07 1.28e-07 1.34e-07 4.82e-08 1.37e-07 1.13e-07 1.08e-07 8.71e-08 1.03e-07 1.05e-07 9.7e-08 3.59e-08 2.74e-08 8.49e-08 8.98e-08 3.87e-08 4.96e-08 9.06e-08 8.14e-08 3.64e-08 3.58e-08 1.79e-07 3.93e-08 3.84e-08 1.01e-07 1.86e-08 1.46e-07 4.82e-09 4.72e-08
ENSG00000231485 \N -736171 2.91e-07 1.25e-07 5.82e-08 1.82e-07 8.83e-08 8.45e-08 1.6e-07 5.24e-08 1.45e-07 4.38e-08 1.67e-07 8.55e-08 2.94e-07 8.07e-08 5.53e-08 7.5e-08 3.88e-08 1.64e-07 5.2e-08 3.15e-08 1.13e-07 1.26e-07 1.44e-07 4.53e-08 1.5e-07 1.15e-07 1.07e-07 8.7e-08 1.08e-07 1.06e-07 1.06e-07 3.72e-08 2.74e-08 8e-08 7.66e-08 3.77e-08 4.95e-08 9.26e-08 8.55e-08 3.12e-08 3.89e-08 3.06e-07 3.91e-08 2.24e-08 9.21e-08 1.68e-08 1.45e-07 4.82e-09 4.72e-08