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Genes within 1Mb (chr1:64321644:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 728233 sc-eQTL 4.42e-01 -0.0614 0.0797 0.421 B L1
ENSG00000088035 ALG6 954069 sc-eQTL 5.48e-01 0.0497 0.0826 0.421 B L1
ENSG00000142856 ITGB3BP 727923 sc-eQTL 3.82e-01 0.08 0.0913 0.421 B L1
ENSG00000162434 JAK1 -746110 sc-eQTL 4.96e-01 -0.0384 0.0562 0.421 B L1
ENSG00000203965 EFCAB7 798272 sc-eQTL 5.91e-01 0.0503 0.0936 0.421 B L1
ENSG00000079739 PGM1 728233 sc-eQTL 9.58e-01 -0.00365 0.0685 0.421 CD4T L1
ENSG00000088035 ALG6 954069 sc-eQTL 4.65e-01 0.0552 0.0755 0.421 CD4T L1
ENSG00000142856 ITGB3BP 727923 sc-eQTL 5.09e-01 0.058 0.0877 0.421 CD4T L1
ENSG00000158966 CACHD1 -148485 sc-eQTL 7.09e-01 0.0196 0.0523 0.421 CD4T L1
ENSG00000162434 JAK1 -746110 sc-eQTL 3.69e-01 -0.0493 0.0548 0.421 CD4T L1
ENSG00000203965 EFCAB7 798272 sc-eQTL 3.68e-01 0.0709 0.0786 0.421 CD4T L1
ENSG00000079739 PGM1 728233 sc-eQTL 3.46e-01 -0.0715 0.0756 0.421 CD8T L1
ENSG00000088035 ALG6 954069 sc-eQTL 9.92e-01 -0.000864 0.0836 0.421 CD8T L1
ENSG00000142856 ITGB3BP 727923 sc-eQTL 3.75e-01 0.0797 0.0898 0.421 CD8T L1
ENSG00000158966 CACHD1 -148485 sc-eQTL 1.37e-01 -0.0676 0.0453 0.421 CD8T L1
ENSG00000162434 JAK1 -746110 sc-eQTL 4.13e-01 -0.0588 0.0716 0.421 CD8T L1
ENSG00000203965 EFCAB7 798272 sc-eQTL 2.98e-02 0.194 0.0886 0.421 CD8T L1
ENSG00000079739 PGM1 728233 sc-eQTL 3.77e-01 0.0753 0.0852 0.414 DC L1
ENSG00000088035 ALG6 954069 sc-eQTL 3.56e-01 -0.0814 0.0879 0.414 DC L1
ENSG00000142856 ITGB3BP 727923 sc-eQTL 4.38e-01 -0.0766 0.0986 0.414 DC L1
ENSG00000162433 AK4 -825905 sc-eQTL 4.13e-01 0.064 0.0781 0.414 DC L1
ENSG00000162434 JAK1 -746110 sc-eQTL 5.10e-01 0.0429 0.065 0.414 DC L1
ENSG00000162437 RAVER2 -423451 sc-eQTL 7.53e-01 0.0263 0.0833 0.414 DC L1
ENSG00000203965 EFCAB7 798272 sc-eQTL 9.77e-01 -0.00247 0.0859 0.414 DC L1
ENSG00000079739 PGM1 728233 sc-eQTL 4.50e-01 0.0625 0.0826 0.421 Mono L1
ENSG00000088035 ALG6 954069 sc-eQTL 3.94e-01 -0.0736 0.0861 0.421 Mono L1
ENSG00000142856 ITGB3BP 727923 sc-eQTL 8.84e-01 -0.0131 0.0891 0.421 Mono L1
ENSG00000162433 AK4 -825905 sc-eQTL 6.75e-01 0.0353 0.084 0.421 Mono L1
ENSG00000162434 JAK1 -746110 sc-eQTL 9.14e-01 -0.0065 0.0599 0.421 Mono L1
ENSG00000079739 PGM1 728233 sc-eQTL 7.32e-01 -0.0238 0.0694 0.421 NK L1
ENSG00000088035 ALG6 954069 sc-eQTL 9.96e-01 0.000448 0.0815 0.421 NK L1
ENSG00000142856 ITGB3BP 727923 sc-eQTL 6.37e-01 0.0423 0.0895 0.421 NK L1
ENSG00000162434 JAK1 -746110 sc-eQTL 1.87e-01 -0.055 0.0415 0.421 NK L1
ENSG00000203965 EFCAB7 798272 sc-eQTL 3.50e-01 0.0908 0.097 0.421 NK L1
ENSG00000079739 PGM1 728233 sc-eQTL 2.54e-01 0.0905 0.0791 0.421 Other_T L1
ENSG00000088035 ALG6 954069 sc-eQTL 9.41e-02 -0.133 0.0792 0.421 Other_T L1
ENSG00000142856 ITGB3BP 727923 sc-eQTL 1.64e-01 0.0868 0.0622 0.421 Other_T L1
ENSG00000162434 JAK1 -746110 sc-eQTL 5.51e-01 -0.0361 0.0605 0.421 Other_T L1
ENSG00000162437 RAVER2 -423451 sc-eQTL 4.60e-01 0.0649 0.0878 0.421 Other_T L1
ENSG00000203965 EFCAB7 798272 sc-eQTL 2.86e-01 -0.103 0.0961 0.421 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 728233 sc-eQTL 3.99e-01 -0.0882 0.104 0.423 B_Activated L2
ENSG00000088035 ALG6 954069 sc-eQTL 7.05e-01 -0.038 0.1 0.423 B_Activated L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 6.51e-01 0.0434 0.0958 0.423 B_Activated L2
ENSG00000162434 JAK1 -746110 sc-eQTL 7.79e-01 0.0269 0.0957 0.423 B_Activated L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 5.87e-01 -0.0494 0.0907 0.423 B_Activated L2
ENSG00000079739 PGM1 728233 sc-eQTL 8.56e-01 -0.0175 0.096 0.423 B_Intermediate L2
ENSG00000088035 ALG6 954069 sc-eQTL 6.27e-01 0.0474 0.0975 0.423 B_Intermediate L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 6.53e-01 0.0423 0.0939 0.423 B_Intermediate L2
ENSG00000162434 JAK1 -746110 sc-eQTL 9.83e-01 0.00177 0.0811 0.423 B_Intermediate L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 8.42e-01 0.0186 0.093 0.423 B_Intermediate L2
ENSG00000079739 PGM1 728233 sc-eQTL 8.27e-01 -0.0207 0.0946 0.422 B_Memory L2
ENSG00000088035 ALG6 954069 sc-eQTL 6.33e-01 0.046 0.0961 0.422 B_Memory L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 5.68e-01 -0.0561 0.098 0.422 B_Memory L2
ENSG00000162434 JAK1 -746110 sc-eQTL 5.02e-01 -0.0548 0.0814 0.422 B_Memory L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 8.85e-01 -0.014 0.0974 0.422 B_Memory L2
ENSG00000079739 PGM1 728233 sc-eQTL 3.43e-01 -0.0905 0.0952 0.421 B_Naive1 L2
ENSG00000088035 ALG6 954069 sc-eQTL 2.07e-01 0.121 0.0954 0.421 B_Naive1 L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 5.00e-02 0.183 0.0929 0.421 B_Naive1 L2
ENSG00000162434 JAK1 -746110 sc-eQTL 5.29e-01 -0.0457 0.0724 0.421 B_Naive1 L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 1.93e-01 0.13 0.0996 0.421 B_Naive1 L2
ENSG00000079739 PGM1 728233 sc-eQTL 4.76e-01 -0.0667 0.0933 0.423 B_Naive2 L2
ENSG00000088035 ALG6 954069 sc-eQTL 1.86e-01 -0.129 0.097 0.423 B_Naive2 L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 2.54e-01 0.111 0.0975 0.423 B_Naive2 L2
ENSG00000162434 JAK1 -746110 sc-eQTL 3.79e-01 -0.0668 0.0757 0.423 B_Naive2 L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 9.71e-01 0.00354 0.0973 0.423 B_Naive2 L2
ENSG00000079739 PGM1 728233 sc-eQTL 5.54e-01 0.0572 0.0964 0.416 CD4_CTL L2
ENSG00000088035 ALG6 954069 sc-eQTL 2.57e-01 0.116 0.102 0.416 CD4_CTL L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 2.98e-01 -0.103 0.0984 0.416 CD4_CTL L2
ENSG00000158966 CACHD1 -148485 sc-eQTL 1.99e-01 -0.046 0.0357 0.416 CD4_CTL L2
ENSG00000162434 JAK1 -746110 sc-eQTL 1.78e-01 -0.119 0.088 0.416 CD4_CTL L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 1.00e-01 0.154 0.0931 0.416 CD4_CTL L2
ENSG00000079739 PGM1 728233 sc-eQTL 2.36e-01 -0.0913 0.0768 0.421 CD4_Naive L2
ENSG00000088035 ALG6 954069 sc-eQTL 7.92e-01 0.0221 0.0837 0.421 CD4_Naive L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 1.29e-01 0.135 0.0884 0.421 CD4_Naive L2
ENSG00000158966 CACHD1 -148485 sc-eQTL 9.15e-01 0.00564 0.0527 0.421 CD4_Naive L2
ENSG00000162434 JAK1 -746110 sc-eQTL 1.21e-01 -0.0832 0.0534 0.421 CD4_Naive L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 2.67e-01 0.098 0.088 0.421 CD4_Naive L2
ENSG00000079739 PGM1 728233 sc-eQTL 4.08e-01 0.0661 0.0797 0.421 CD4_TCM L2
ENSG00000088035 ALG6 954069 sc-eQTL 3.40e-01 0.0885 0.0925 0.421 CD4_TCM L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 3.74e-01 -0.0839 0.0941 0.421 CD4_TCM L2
ENSG00000158966 CACHD1 -148485 sc-eQTL 3.06e-01 0.0764 0.0745 0.421 CD4_TCM L2
ENSG00000162434 JAK1 -746110 sc-eQTL 8.67e-01 0.0102 0.0611 0.421 CD4_TCM L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 3.52e-01 0.0849 0.0911 0.421 CD4_TCM L2
ENSG00000079739 PGM1 728233 sc-eQTL 6.49e-01 -0.0427 0.0938 0.421 CD4_TEM L2
ENSG00000088035 ALG6 954069 sc-eQTL 7.55e-01 0.0295 0.0943 0.421 CD4_TEM L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 2.38e-01 0.109 0.0919 0.421 CD4_TEM L2
ENSG00000158966 CACHD1 -148485 sc-eQTL 7.10e-01 -0.0212 0.057 0.421 CD4_TEM L2
ENSG00000162434 JAK1 -746110 sc-eQTL 9.67e-01 0.00331 0.081 0.421 CD4_TEM L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 5.12e-01 -0.0626 0.0954 0.421 CD4_TEM L2
ENSG00000079739 PGM1 728233 sc-eQTL 1.94e-01 -0.11 0.0848 0.421 CD8_CTL L2
ENSG00000088035 ALG6 954069 sc-eQTL 2.59e-01 -0.102 0.0902 0.421 CD8_CTL L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 2.83e-01 0.102 0.0948 0.421 CD8_CTL L2
ENSG00000158966 CACHD1 -148485 sc-eQTL 7.41e-01 0.0133 0.0403 0.421 CD8_CTL L2
ENSG00000162434 JAK1 -746110 sc-eQTL 6.87e-01 0.0304 0.0752 0.421 CD8_CTL L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 2.68e-02 0.215 0.0962 0.421 CD8_CTL L2
ENSG00000079739 PGM1 728233 sc-eQTL 4.80e-01 -0.0609 0.0861 0.421 CD8_Naive L2
ENSG00000088035 ALG6 954069 sc-eQTL 5.38e-01 -0.055 0.0892 0.421 CD8_Naive L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 7.70e-01 0.0263 0.0897 0.421 CD8_Naive L2
ENSG00000158966 CACHD1 -148485 sc-eQTL 7.83e-02 -0.109 0.0617 0.421 CD8_Naive L2
ENSG00000162434 JAK1 -746110 sc-eQTL 7.35e-03 -0.199 0.0735 0.421 CD8_Naive L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 7.46e-01 -0.0274 0.0845 0.421 CD8_Naive L2
ENSG00000079739 PGM1 728233 sc-eQTL 6.11e-01 0.0479 0.0938 0.426 CD8_TCM L2
ENSG00000088035 ALG6 954069 sc-eQTL 6.38e-01 0.0448 0.095 0.426 CD8_TCM L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 6.33e-01 0.0441 0.0922 0.426 CD8_TCM L2
ENSG00000158966 CACHD1 -148485 sc-eQTL 7.37e-01 0.0163 0.0484 0.426 CD8_TCM L2
ENSG00000162434 JAK1 -746110 sc-eQTL 3.37e-01 -0.0748 0.0777 0.426 CD8_TCM L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 6.62e-01 0.0411 0.0939 0.426 CD8_TCM L2
ENSG00000079739 PGM1 728233 sc-eQTL 8.39e-01 0.02 0.0981 0.42 CD8_TEM L2
ENSG00000088035 ALG6 954069 sc-eQTL 4.92e-01 0.0678 0.0984 0.42 CD8_TEM L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 1.18e-01 -0.155 0.0988 0.42 CD8_TEM L2
ENSG00000158966 CACHD1 -148485 sc-eQTL 2.97e-02 0.0438 0.02 0.42 CD8_TEM L2
ENSG00000162434 JAK1 -746110 sc-eQTL 6.70e-01 -0.0408 0.0956 0.42 CD8_TEM L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 1.12e-01 0.153 0.0958 0.42 CD8_TEM L2
ENSG00000079739 PGM1 728233 sc-eQTL 6.06e-01 0.047 0.091 0.42 MAIT L2
ENSG00000088035 ALG6 954069 sc-eQTL 8.81e-01 -0.0135 0.0902 0.42 MAIT L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 6.69e-02 0.167 0.0905 0.42 MAIT L2
ENSG00000162434 JAK1 -746110 sc-eQTL 5.22e-01 0.0529 0.0823 0.42 MAIT L2
ENSG00000162437 RAVER2 -423451 sc-eQTL 8.47e-01 0.017 0.0878 0.42 MAIT L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 7.11e-01 0.0349 0.0939 0.42 MAIT L2
ENSG00000079739 PGM1 728233 sc-eQTL 6.83e-01 0.0371 0.0907 0.418 NK_CD56bright L2
ENSG00000088035 ALG6 954069 sc-eQTL 1.24e-02 -0.231 0.0915 0.418 NK_CD56bright L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 6.00e-01 -0.0492 0.0936 0.418 NK_CD56bright L2
ENSG00000162434 JAK1 -746110 sc-eQTL 7.87e-01 -0.016 0.0591 0.418 NK_CD56bright L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 3.37e-01 0.0888 0.0922 0.418 NK_CD56bright L2
ENSG00000079739 PGM1 728233 sc-eQTL 9.10e-01 -0.00824 0.0729 0.42 NK_CD56dim L2
ENSG00000088035 ALG6 954069 sc-eQTL 2.37e-02 0.208 0.0913 0.42 NK_CD56dim L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 4.56e-01 0.0693 0.0928 0.42 NK_CD56dim L2
ENSG00000162434 JAK1 -746110 sc-eQTL 2.12e-01 -0.0612 0.0489 0.42 NK_CD56dim L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 7.91e-01 -0.0266 0.1 0.42 NK_CD56dim L2
ENSG00000079739 PGM1 728233 sc-eQTL 8.86e-01 -0.0142 0.0985 0.425 NK_HLA L2
ENSG00000088035 ALG6 954069 sc-eQTL 8.14e-01 0.024 0.102 0.425 NK_HLA L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 6.50e-01 0.0434 0.0954 0.425 NK_HLA L2
ENSG00000162434 JAK1 -746110 sc-eQTL 9.21e-01 0.00635 0.0638 0.425 NK_HLA L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 7.15e-01 -0.0332 0.0908 0.425 NK_HLA L2
ENSG00000079739 PGM1 728233 sc-eQTL 4.16e-01 -0.064 0.0785 0.42 NK_cytokine L2
ENSG00000088035 ALG6 954069 sc-eQTL 2.82e-01 -0.0956 0.0886 0.42 NK_cytokine L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 5.39e-01 0.0537 0.0871 0.42 NK_cytokine L2
ENSG00000162434 JAK1 -746110 sc-eQTL 1.53e-01 -0.074 0.0516 0.42 NK_cytokine L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 2.83e-01 0.0997 0.0927 0.42 NK_cytokine L2
ENSG00000079739 PGM1 728233 sc-eQTL 2.46e-01 0.132 0.113 0.404 PB L2
ENSG00000088035 ALG6 954069 sc-eQTL 2.19e-01 -0.146 0.119 0.404 PB L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 5.31e-01 0.0697 0.111 0.404 PB L2
ENSG00000162434 JAK1 -746110 sc-eQTL 4.96e-01 -0.0572 0.0836 0.404 PB L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 8.11e-01 0.0292 0.122 0.404 PB L2
ENSG00000079739 PGM1 728233 sc-eQTL 2.58e-01 0.0969 0.0854 0.422 Pro_T L2
ENSG00000088035 ALG6 954069 sc-eQTL 7.24e-01 -0.0308 0.0871 0.422 Pro_T L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 3.68e-01 -0.0691 0.0766 0.422 Pro_T L2
ENSG00000162434 JAK1 -746110 sc-eQTL 7.54e-01 0.019 0.0605 0.422 Pro_T L2
ENSG00000162437 RAVER2 -423451 sc-eQTL 4.38e-01 -0.0619 0.0798 0.422 Pro_T L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 3.45e-01 -0.0843 0.089 0.422 Pro_T L2
ENSG00000079739 PGM1 728233 sc-eQTL 4.12e-01 0.0741 0.0902 0.421 Treg L2
ENSG00000088035 ALG6 954069 sc-eQTL 9.54e-01 0.00564 0.0966 0.421 Treg L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 4.12e-02 -0.193 0.0939 0.421 Treg L2
ENSG00000158966 CACHD1 -148485 sc-eQTL 1.57e-02 0.172 0.0707 0.421 Treg L2
ENSG00000162434 JAK1 -746110 sc-eQTL 9.66e-01 -0.0033 0.0763 0.421 Treg L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 7.73e-01 0.0262 0.0907 0.421 Treg L2
ENSG00000079739 PGM1 728233 sc-eQTL 8.59e-01 0.0165 0.0931 0.422 cDC L2
ENSG00000088035 ALG6 954069 sc-eQTL 7.43e-01 -0.031 0.0944 0.422 cDC L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 2.04e-01 -0.13 0.101 0.422 cDC L2
ENSG00000162433 AK4 -825905 sc-eQTL 5.09e-01 0.0562 0.085 0.422 cDC L2
ENSG00000162434 JAK1 -746110 sc-eQTL 6.71e-01 -0.0338 0.0794 0.422 cDC L2
ENSG00000162437 RAVER2 -423451 sc-eQTL 3.28e-01 0.0853 0.0871 0.422 cDC L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 3.91e-01 0.0703 0.0817 0.422 cDC L2
ENSG00000079739 PGM1 728233 sc-eQTL 7.91e-01 0.0232 0.0872 0.421 cMono_IL1B L2
ENSG00000088035 ALG6 954069 sc-eQTL 2.37e-01 -0.103 0.0871 0.421 cMono_IL1B L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 2.06e-01 0.116 0.0914 0.421 cMono_IL1B L2
ENSG00000162433 AK4 -825905 sc-eQTL 7.05e-01 0.0327 0.0863 0.421 cMono_IL1B L2
ENSG00000162434 JAK1 -746110 sc-eQTL 3.22e-01 -0.0777 0.0783 0.421 cMono_IL1B L2
ENSG00000079739 PGM1 728233 sc-eQTL 6.59e-01 0.0419 0.0949 0.421 cMono_S100A L2
ENSG00000088035 ALG6 954069 sc-eQTL 9.63e-01 0.00441 0.0962 0.421 cMono_S100A L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 2.96e-01 -0.0911 0.0869 0.421 cMono_S100A L2
ENSG00000162433 AK4 -825905 sc-eQTL 4.15e-01 0.0703 0.0859 0.421 cMono_S100A L2
ENSG00000162434 JAK1 -746110 sc-eQTL 5.15e-01 0.0518 0.0794 0.421 cMono_S100A L2
ENSG00000079739 PGM1 728233 sc-eQTL 3.62e-01 0.0958 0.105 0.439 gdT L2
ENSG00000088035 ALG6 954069 sc-eQTL 3.20e-01 -0.111 0.112 0.439 gdT L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 7.80e-01 -0.0311 0.111 0.439 gdT L2
ENSG00000162434 JAK1 -746110 sc-eQTL 3.18e-02 -0.239 0.11 0.439 gdT L2
ENSG00000162437 RAVER2 -423451 sc-eQTL 6.07e-01 0.0509 0.0985 0.439 gdT L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 1.68e-02 -0.26 0.108 0.439 gdT L2
ENSG00000079739 PGM1 728233 sc-eQTL 3.75e-01 -0.086 0.0968 0.416 intMono L2
ENSG00000088035 ALG6 954069 sc-eQTL 7.24e-01 0.0319 0.0903 0.416 intMono L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 3.73e-01 -0.0865 0.0968 0.416 intMono L2
ENSG00000162433 AK4 -825905 sc-eQTL 5.64e-01 0.0495 0.0855 0.416 intMono L2
ENSG00000162434 JAK1 -746110 sc-eQTL 4.57e-01 0.0589 0.0791 0.416 intMono L2
ENSG00000079739 PGM1 728233 sc-eQTL 8.17e-01 0.02 0.0865 0.423 ncMono L2
ENSG00000088035 ALG6 954069 sc-eQTL 1.51e-01 -0.136 0.0945 0.423 ncMono L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 4.85e-01 0.0639 0.0913 0.423 ncMono L2
ENSG00000162433 AK4 -825905 sc-eQTL 9.18e-02 -0.134 0.0791 0.423 ncMono L2
ENSG00000162434 JAK1 -746110 sc-eQTL 8.25e-01 0.0143 0.0645 0.423 ncMono L2
ENSG00000079739 PGM1 728233 sc-eQTL 1.97e-01 0.142 0.109 0.427 pDC L2
ENSG00000088035 ALG6 954069 sc-eQTL 1.72e-02 -0.253 0.105 0.427 pDC L2
ENSG00000142856 ITGB3BP 727923 sc-eQTL 7.76e-01 0.0315 0.11 0.427 pDC L2
ENSG00000162433 AK4 -825905 sc-eQTL 6.30e-01 -0.0321 0.0664 0.427 pDC L2
ENSG00000162434 JAK1 -746110 sc-eQTL 2.13e-01 0.111 0.0883 0.427 pDC L2
ENSG00000162437 RAVER2 -423451 sc-eQTL 3.86e-01 -0.0868 0.0998 0.427 pDC L2
ENSG00000203965 EFCAB7 798272 sc-eQTL 2.19e-01 -0.12 0.0971 0.427 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 728233 sc-eQTL 6.62e-01 -0.039 0.0891 0.421 B_Memory LOneK1K
ENSG00000088035 ALG6 954069 sc-eQTL 6.71e-01 0.0419 0.0985 0.421 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 727923 sc-eQTL 7.90e-01 -0.0242 0.0909 0.421 B_Memory LOneK1K
ENSG00000162434 JAK1 -746110 sc-eQTL 5.57e-01 -0.0421 0.0717 0.421 B_Memory LOneK1K
ENSG00000203965 EFCAB7 798272 sc-eQTL 8.84e-01 0.0138 0.0947 0.421 B_Memory LOneK1K
ENSG00000079739 PGM1 728233 sc-eQTL 1.76e-01 -0.126 0.0924 0.421 B_Naive LOneK1K
ENSG00000088035 ALG6 954069 sc-eQTL 8.78e-01 0.0147 0.0955 0.421 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 727923 sc-eQTL 3.38e-02 0.203 0.0952 0.421 B_Naive LOneK1K
ENSG00000162434 JAK1 -746110 sc-eQTL 3.46e-01 -0.0658 0.0697 0.421 B_Naive LOneK1K
ENSG00000203965 EFCAB7 798272 sc-eQTL 1.95e-01 0.125 0.0964 0.421 B_Naive LOneK1K
ENSG00000079739 PGM1 728233 sc-eQTL 4.59e-01 0.0658 0.0887 0.421 CD14_Mono LOneK1K
ENSG00000088035 ALG6 954069 sc-eQTL 2.38e-01 -0.102 0.0858 0.421 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 727923 sc-eQTL 8.39e-01 0.018 0.0886 0.421 CD14_Mono LOneK1K
ENSG00000162433 AK4 -825905 sc-eQTL 7.70e-01 0.0257 0.0875 0.421 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -746110 sc-eQTL 7.02e-01 -0.028 0.0733 0.421 CD14_Mono LOneK1K
ENSG00000079739 PGM1 728233 sc-eQTL 9.11e-01 0.00938 0.0834 0.42 CD16_Mono LOneK1K
ENSG00000088035 ALG6 954069 sc-eQTL 4.48e-01 -0.0719 0.0945 0.42 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 727923 sc-eQTL 9.42e-01 -0.00674 0.0927 0.42 CD16_Mono LOneK1K
ENSG00000162433 AK4 -825905 sc-eQTL 7.80e-01 -0.023 0.0821 0.42 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -746110 sc-eQTL 5.74e-01 0.0311 0.0552 0.42 CD16_Mono LOneK1K
ENSG00000079739 PGM1 728233 sc-eQTL 6.03e-01 -0.0371 0.0713 0.42 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 954069 sc-eQTL 3.49e-01 0.0802 0.0855 0.42 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 727923 sc-eQTL 2.62e-01 0.102 0.0905 0.42 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -746110 sc-eQTL 1.89e-01 -0.0565 0.0429 0.42 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 798272 sc-eQTL 6.96e-01 0.0392 0.1 0.42 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162434 JAK1 -644905 eQTL 0.0305 0.0313 0.0145 0.00108 0.0 0.474
ENSG00000185483 ROR1 547627 pQTL 9.55e-06 -0.0588 0.0132 0.0 0.0 0.46

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000231485 \N -746093 2.74e-07 1.19e-07 3.54e-08 1.82e-07 8.83e-08 9.87e-08 1.42e-07 5.33e-08 1.4e-07 4.4e-08 1.56e-07 8.36e-08 1.33e-07 6.38e-08 6e-08 7.26e-08 3.9e-08 1.14e-07 5.19e-08 4.07e-08 1.04e-07 1.27e-07 1.32e-07 4.05e-08 1.32e-07 1.19e-07 1.11e-07 9.32e-08 1.05e-07 1.12e-07 9.73e-08 4.09e-08 3.28e-08 8.65e-08 8.94e-08 3.76e-08 4.84e-08 9.61e-08 7.52e-08 3.55e-08 4.51e-08 1.31e-07 4.89e-08 1.91e-08 5.75e-08 1.67e-08 1.24e-07 3.86e-09 5.09e-08