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Genes within 1Mb (chr1:64295866:G:GA):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 702455 sc-eQTL 1.18e-02 0.192 0.0757 0.496 B L1
ENSG00000088035 ALG6 928291 sc-eQTL 2.77e-01 -0.0865 0.0794 0.496 B L1
ENSG00000142856 ITGB3BP 702145 sc-eQTL 7.20e-01 0.0316 0.088 0.496 B L1
ENSG00000162434 JAK1 -771888 sc-eQTL 8.06e-01 -0.0133 0.0542 0.496 B L1
ENSG00000203965 EFCAB7 772494 sc-eQTL 6.52e-01 0.0407 0.0901 0.496 B L1
ENSG00000079739 PGM1 702455 sc-eQTL 8.06e-02 0.115 0.0655 0.496 CD4T L1
ENSG00000088035 ALG6 928291 sc-eQTL 5.56e-01 0.0429 0.0728 0.496 CD4T L1
ENSG00000142856 ITGB3BP 702145 sc-eQTL 5.96e-01 0.0448 0.0844 0.496 CD4T L1
ENSG00000158966 CACHD1 -174263 sc-eQTL 2.52e-01 -0.0577 0.0503 0.496 CD4T L1
ENSG00000162434 JAK1 -771888 sc-eQTL 2.53e-01 -0.0604 0.0527 0.496 CD4T L1
ENSG00000203965 EFCAB7 772494 sc-eQTL 9.78e-01 0.00206 0.0758 0.496 CD4T L1
ENSG00000079739 PGM1 702455 sc-eQTL 5.56e-02 0.139 0.0724 0.496 CD8T L1
ENSG00000088035 ALG6 928291 sc-eQTL 8.94e-01 -0.0108 0.0805 0.496 CD8T L1
ENSG00000142856 ITGB3BP 702145 sc-eQTL 7.01e-01 -0.0333 0.0866 0.496 CD8T L1
ENSG00000158966 CACHD1 -174263 sc-eQTL 9.97e-01 0.000142 0.0438 0.496 CD8T L1
ENSG00000162434 JAK1 -771888 sc-eQTL 2.06e-01 -0.0873 0.0688 0.496 CD8T L1
ENSG00000203965 EFCAB7 772494 sc-eQTL 9.87e-01 0.00144 0.0863 0.496 CD8T L1
ENSG00000079739 PGM1 702455 sc-eQTL 4.15e-01 0.0668 0.0818 0.498 DC L1
ENSG00000088035 ALG6 928291 sc-eQTL 3.00e-01 -0.0876 0.0843 0.498 DC L1
ENSG00000142856 ITGB3BP 702145 sc-eQTL 2.60e-01 0.107 0.0945 0.498 DC L1
ENSG00000162433 AK4 -851683 sc-eQTL 2.08e-02 0.173 0.0741 0.498 DC L1
ENSG00000162434 JAK1 -771888 sc-eQTL 7.63e-01 0.0189 0.0624 0.498 DC L1
ENSG00000162437 RAVER2 -449229 sc-eQTL 9.50e-02 -0.133 0.0794 0.498 DC L1
ENSG00000203965 EFCAB7 772494 sc-eQTL 5.54e-01 0.0489 0.0824 0.498 DC L1
ENSG00000079739 PGM1 702455 sc-eQTL 6.82e-01 0.0324 0.0789 0.496 Mono L1
ENSG00000088035 ALG6 928291 sc-eQTL 8.09e-01 -0.0199 0.0824 0.496 Mono L1
ENSG00000142856 ITGB3BP 702145 sc-eQTL 9.99e-01 0.000141 0.0851 0.496 Mono L1
ENSG00000162433 AK4 -851683 sc-eQTL 4.41e-01 0.0619 0.0802 0.496 Mono L1
ENSG00000162434 JAK1 -771888 sc-eQTL 5.41e-01 -0.035 0.0572 0.496 Mono L1
ENSG00000079739 PGM1 702455 sc-eQTL 2.86e-02 0.15 0.0679 0.498 NK L1
ENSG00000088035 ALG6 928291 sc-eQTL 4.20e-01 -0.0649 0.0804 0.498 NK L1
ENSG00000142856 ITGB3BP 702145 sc-eQTL 5.53e-01 0.0525 0.0884 0.498 NK L1
ENSG00000162434 JAK1 -771888 sc-eQTL 8.48e-01 -0.00792 0.0412 0.498 NK L1
ENSG00000203965 EFCAB7 772494 sc-eQTL 8.81e-01 -0.0144 0.0961 0.498 NK L1
ENSG00000079739 PGM1 702455 sc-eQTL 6.31e-01 0.0368 0.0764 0.496 Other_T L1
ENSG00000088035 ALG6 928291 sc-eQTL 2.88e-01 0.0816 0.0766 0.496 Other_T L1
ENSG00000142856 ITGB3BP 702145 sc-eQTL 4.93e-01 -0.0413 0.0601 0.496 Other_T L1
ENSG00000162434 JAK1 -771888 sc-eQTL 6.55e-01 -0.026 0.0583 0.496 Other_T L1
ENSG00000162437 RAVER2 -449229 sc-eQTL 3.22e-01 0.0839 0.0845 0.496 Other_T L1
ENSG00000203965 EFCAB7 772494 sc-eQTL 6.32e-02 0.172 0.0921 0.496 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 702455 sc-eQTL 4.30e-02 0.207 0.101 0.503 B_Activated L2
ENSG00000088035 ALG6 928291 sc-eQTL 7.75e-01 0.0281 0.0984 0.503 B_Activated L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 6.88e-01 -0.0379 0.0941 0.503 B_Activated L2
ENSG00000162434 JAK1 -771888 sc-eQTL 6.56e-01 -0.0419 0.0939 0.503 B_Activated L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 6.24e-01 0.0437 0.089 0.503 B_Activated L2
ENSG00000079739 PGM1 702455 sc-eQTL 7.36e-01 0.0309 0.0916 0.496 B_Intermediate L2
ENSG00000088035 ALG6 928291 sc-eQTL 3.29e-01 -0.091 0.0929 0.496 B_Intermediate L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 4.89e-01 0.0622 0.0896 0.496 B_Intermediate L2
ENSG00000162434 JAK1 -771888 sc-eQTL 9.36e-01 0.00621 0.0774 0.496 B_Intermediate L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 6.52e-01 0.0401 0.0888 0.496 B_Intermediate L2
ENSG00000079739 PGM1 702455 sc-eQTL 9.76e-02 0.148 0.0891 0.496 B_Memory L2
ENSG00000088035 ALG6 928291 sc-eQTL 7.15e-01 -0.0333 0.0911 0.496 B_Memory L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 9.62e-01 -0.00448 0.093 0.496 B_Memory L2
ENSG00000162434 JAK1 -771888 sc-eQTL 9.83e-02 0.127 0.0767 0.496 B_Memory L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 7.06e-01 -0.0348 0.0923 0.496 B_Memory L2
ENSG00000079739 PGM1 702455 sc-eQTL 3.23e-02 0.197 0.0913 0.496 B_Naive1 L2
ENSG00000088035 ALG6 928291 sc-eQTL 2.84e-01 -0.0993 0.0925 0.496 B_Naive1 L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 9.57e-01 -0.00485 0.0908 0.496 B_Naive1 L2
ENSG00000162434 JAK1 -771888 sc-eQTL 5.20e-01 -0.0452 0.0701 0.496 B_Naive1 L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 8.23e-01 0.0217 0.0968 0.496 B_Naive1 L2
ENSG00000079739 PGM1 702455 sc-eQTL 2.33e-02 0.203 0.0887 0.496 B_Naive2 L2
ENSG00000088035 ALG6 928291 sc-eQTL 8.18e-01 0.0215 0.0936 0.496 B_Naive2 L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 4.36e-01 0.0732 0.0938 0.496 B_Naive2 L2
ENSG00000162434 JAK1 -771888 sc-eQTL 4.87e-02 -0.143 0.0722 0.496 B_Naive2 L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 3.79e-01 -0.0822 0.0934 0.496 B_Naive2 L2
ENSG00000079739 PGM1 702455 sc-eQTL 5.22e-01 0.0606 0.0946 0.502 CD4_CTL L2
ENSG00000088035 ALG6 928291 sc-eQTL 9.07e-01 -0.0117 0.1 0.502 CD4_CTL L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 4.35e-01 -0.0757 0.0967 0.502 CD4_CTL L2
ENSG00000158966 CACHD1 -174263 sc-eQTL 6.40e-01 -0.0165 0.0352 0.502 CD4_CTL L2
ENSG00000162434 JAK1 -771888 sc-eQTL 7.40e-01 -0.0288 0.0868 0.502 CD4_CTL L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 3.53e-01 -0.0855 0.0918 0.502 CD4_CTL L2
ENSG00000079739 PGM1 702455 sc-eQTL 7.83e-02 0.13 0.0732 0.496 CD4_Naive L2
ENSG00000088035 ALG6 928291 sc-eQTL 1.62e-01 0.112 0.0798 0.496 CD4_Naive L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 7.92e-01 0.0224 0.0851 0.496 CD4_Naive L2
ENSG00000158966 CACHD1 -174263 sc-eQTL 3.38e-01 -0.0483 0.0503 0.496 CD4_Naive L2
ENSG00000162434 JAK1 -771888 sc-eQTL 5.30e-01 -0.0323 0.0514 0.496 CD4_Naive L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 8.27e-01 -0.0185 0.0845 0.496 CD4_Naive L2
ENSG00000079739 PGM1 702455 sc-eQTL 2.39e-01 0.0907 0.0768 0.496 CD4_TCM L2
ENSG00000088035 ALG6 928291 sc-eQTL 6.35e-01 -0.0426 0.0895 0.496 CD4_TCM L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 8.10e-01 0.0219 0.091 0.496 CD4_TCM L2
ENSG00000158966 CACHD1 -174263 sc-eQTL 8.51e-01 -0.0136 0.0721 0.496 CD4_TCM L2
ENSG00000162434 JAK1 -771888 sc-eQTL 3.31e-01 -0.0573 0.0589 0.496 CD4_TCM L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 3.76e-01 0.078 0.0879 0.496 CD4_TCM L2
ENSG00000079739 PGM1 702455 sc-eQTL 1.00e+00 2.56e-05 0.0912 0.496 CD4_TEM L2
ENSG00000088035 ALG6 928291 sc-eQTL 7.04e-01 -0.0349 0.0917 0.496 CD4_TEM L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 4.90e-01 0.0619 0.0895 0.496 CD4_TEM L2
ENSG00000158966 CACHD1 -174263 sc-eQTL 6.37e-01 0.0262 0.0554 0.496 CD4_TEM L2
ENSG00000162434 JAK1 -771888 sc-eQTL 5.08e-02 -0.153 0.0781 0.496 CD4_TEM L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 8.55e-01 0.017 0.0929 0.496 CD4_TEM L2
ENSG00000079739 PGM1 702455 sc-eQTL 1.56e-01 0.117 0.0823 0.496 CD8_CTL L2
ENSG00000088035 ALG6 928291 sc-eQTL 1.93e-01 0.114 0.0875 0.496 CD8_CTL L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 8.85e-01 0.0134 0.0923 0.496 CD8_CTL L2
ENSG00000158966 CACHD1 -174263 sc-eQTL 2.67e-01 -0.0435 0.039 0.496 CD8_CTL L2
ENSG00000162434 JAK1 -771888 sc-eQTL 9.23e-01 0.00704 0.0731 0.496 CD8_CTL L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 3.36e-01 -0.091 0.0944 0.496 CD8_CTL L2
ENSG00000079739 PGM1 702455 sc-eQTL 5.19e-02 0.163 0.0836 0.496 CD8_Naive L2
ENSG00000088035 ALG6 928291 sc-eQTL 9.45e-01 0.00605 0.0873 0.496 CD8_Naive L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 9.91e-01 -0.000947 0.0877 0.496 CD8_Naive L2
ENSG00000158966 CACHD1 -174263 sc-eQTL 9.81e-01 0.00146 0.0608 0.496 CD8_Naive L2
ENSG00000162434 JAK1 -771888 sc-eQTL 1.18e-01 -0.114 0.0727 0.496 CD8_Naive L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 5.33e-01 0.0516 0.0826 0.496 CD8_Naive L2
ENSG00000079739 PGM1 702455 sc-eQTL 7.43e-01 -0.0305 0.093 0.498 CD8_TCM L2
ENSG00000088035 ALG6 928291 sc-eQTL 4.77e-01 0.067 0.094 0.498 CD8_TCM L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 8.46e-01 -0.0178 0.0913 0.498 CD8_TCM L2
ENSG00000158966 CACHD1 -174263 sc-eQTL 9.54e-01 0.00275 0.048 0.498 CD8_TCM L2
ENSG00000162434 JAK1 -771888 sc-eQTL 8.78e-01 -0.0118 0.0771 0.498 CD8_TCM L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 8.31e-01 0.0199 0.0931 0.498 CD8_TCM L2
ENSG00000079739 PGM1 702455 sc-eQTL 9.68e-01 -0.00382 0.0947 0.505 CD8_TEM L2
ENSG00000088035 ALG6 928291 sc-eQTL 6.71e-01 -0.0404 0.095 0.505 CD8_TEM L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 5.90e-01 0.0517 0.0958 0.505 CD8_TEM L2
ENSG00000158966 CACHD1 -174263 sc-eQTL 5.25e-01 -0.0124 0.0195 0.505 CD8_TEM L2
ENSG00000162434 JAK1 -771888 sc-eQTL 2.02e-01 -0.118 0.0919 0.505 CD8_TEM L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 8.63e-01 0.0161 0.0929 0.505 CD8_TEM L2
ENSG00000079739 PGM1 702455 sc-eQTL 4.83e-01 0.062 0.0884 0.498 MAIT L2
ENSG00000088035 ALG6 928291 sc-eQTL 2.52e-01 0.1 0.0873 0.498 MAIT L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 3.23e-01 -0.0876 0.0884 0.498 MAIT L2
ENSG00000162434 JAK1 -771888 sc-eQTL 6.72e-01 -0.0339 0.08 0.498 MAIT L2
ENSG00000162437 RAVER2 -449229 sc-eQTL 6.81e-02 0.155 0.0846 0.498 MAIT L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 9.86e-01 -0.00159 0.0912 0.498 MAIT L2
ENSG00000079739 PGM1 702455 sc-eQTL 7.49e-01 0.0291 0.0908 0.496 NK_CD56bright L2
ENSG00000088035 ALG6 928291 sc-eQTL 5.99e-01 0.0489 0.093 0.496 NK_CD56bright L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 7.74e-01 -0.027 0.0938 0.496 NK_CD56bright L2
ENSG00000162434 JAK1 -771888 sc-eQTL 6.29e-01 0.0286 0.0591 0.496 NK_CD56bright L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 6.44e-01 0.0428 0.0925 0.496 NK_CD56bright L2
ENSG00000079739 PGM1 702455 sc-eQTL 1.78e-02 0.171 0.0715 0.496 NK_CD56dim L2
ENSG00000088035 ALG6 928291 sc-eQTL 2.37e-01 -0.109 0.0916 0.496 NK_CD56dim L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 5.51e-01 0.0551 0.0924 0.496 NK_CD56dim L2
ENSG00000162434 JAK1 -771888 sc-eQTL 9.56e-01 -0.0027 0.0488 0.496 NK_CD56dim L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 9.41e-01 0.00737 0.0999 0.496 NK_CD56dim L2
ENSG00000079739 PGM1 702455 sc-eQTL 3.64e-01 0.0888 0.0975 0.489 NK_HLA L2
ENSG00000088035 ALG6 928291 sc-eQTL 6.11e-01 -0.0516 0.101 0.489 NK_HLA L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 7.14e-01 -0.0346 0.0945 0.489 NK_HLA L2
ENSG00000162434 JAK1 -771888 sc-eQTL 2.74e-01 0.0692 0.063 0.489 NK_HLA L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 8.62e-01 0.0157 0.0901 0.489 NK_HLA L2
ENSG00000079739 PGM1 702455 sc-eQTL 9.51e-01 0.00487 0.0785 0.496 NK_cytokine L2
ENSG00000088035 ALG6 928291 sc-eQTL 9.53e-01 0.00526 0.0887 0.496 NK_cytokine L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 7.94e-01 0.0227 0.087 0.496 NK_cytokine L2
ENSG00000162434 JAK1 -771888 sc-eQTL 5.44e-01 -0.0315 0.0517 0.496 NK_cytokine L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 9.85e-01 0.00172 0.0927 0.496 NK_cytokine L2
ENSG00000079739 PGM1 702455 sc-eQTL 8.34e-01 -0.0222 0.106 0.474 PB L2
ENSG00000088035 ALG6 928291 sc-eQTL 4.34e-01 -0.0867 0.111 0.474 PB L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 2.75e-01 -0.113 0.103 0.474 PB L2
ENSG00000162434 JAK1 -771888 sc-eQTL 5.66e-01 -0.0448 0.0777 0.474 PB L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 2.50e-01 0.13 0.113 0.474 PB L2
ENSG00000079739 PGM1 702455 sc-eQTL 9.14e-01 -0.00916 0.0845 0.498 Pro_T L2
ENSG00000088035 ALG6 928291 sc-eQTL 4.82e-01 0.0605 0.0859 0.498 Pro_T L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 5.00e-02 -0.148 0.0751 0.498 Pro_T L2
ENSG00000162434 JAK1 -771888 sc-eQTL 8.22e-01 -0.0135 0.0597 0.498 Pro_T L2
ENSG00000162437 RAVER2 -449229 sc-eQTL 6.45e-01 0.0364 0.0788 0.498 Pro_T L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 1.99e-02 0.204 0.0869 0.498 Pro_T L2
ENSG00000079739 PGM1 702455 sc-eQTL 9.18e-01 -0.00896 0.0873 0.496 Treg L2
ENSG00000088035 ALG6 928291 sc-eQTL 7.29e-01 -0.0323 0.0934 0.496 Treg L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 1.32e-01 0.138 0.0912 0.496 Treg L2
ENSG00000158966 CACHD1 -174263 sc-eQTL 7.39e-03 -0.184 0.0681 0.496 Treg L2
ENSG00000162434 JAK1 -771888 sc-eQTL 7.34e-02 -0.132 0.0732 0.496 Treg L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 9.65e-01 0.00381 0.0877 0.496 Treg L2
ENSG00000079739 PGM1 702455 sc-eQTL 3.49e-01 0.0826 0.088 0.5 cDC L2
ENSG00000088035 ALG6 928291 sc-eQTL 1.77e-01 -0.121 0.089 0.5 cDC L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 5.87e-02 0.182 0.0957 0.5 cDC L2
ENSG00000162433 AK4 -851683 sc-eQTL 1.40e-03 0.255 0.0785 0.5 cDC L2
ENSG00000162434 JAK1 -771888 sc-eQTL 9.84e-01 -0.00152 0.0753 0.5 cDC L2
ENSG00000162437 RAVER2 -449229 sc-eQTL 3.31e-01 -0.0804 0.0826 0.5 cDC L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 9.08e-01 0.00898 0.0776 0.5 cDC L2
ENSG00000079739 PGM1 702455 sc-eQTL 1.77e-01 0.111 0.082 0.496 cMono_IL1B L2
ENSG00000088035 ALG6 928291 sc-eQTL 7.77e-01 0.0234 0.0824 0.496 cMono_IL1B L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 8.08e-01 0.0211 0.0866 0.496 cMono_IL1B L2
ENSG00000162433 AK4 -851683 sc-eQTL 6.23e-01 0.0401 0.0814 0.496 cMono_IL1B L2
ENSG00000162434 JAK1 -771888 sc-eQTL 9.36e-01 -0.00591 0.0741 0.496 cMono_IL1B L2
ENSG00000079739 PGM1 702455 sc-eQTL 5.92e-01 -0.0491 0.0915 0.496 cMono_S100A L2
ENSG00000088035 ALG6 928291 sc-eQTL 7.33e-02 -0.166 0.0921 0.496 cMono_S100A L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 6.24e-01 0.0412 0.084 0.496 cMono_S100A L2
ENSG00000162433 AK4 -851683 sc-eQTL 7.88e-01 0.0223 0.083 0.496 cMono_S100A L2
ENSG00000162434 JAK1 -771888 sc-eQTL 2.27e-01 -0.0926 0.0763 0.496 cMono_S100A L2
ENSG00000079739 PGM1 702455 sc-eQTL 9.47e-01 0.00672 0.101 0.497 gdT L2
ENSG00000088035 ALG6 928291 sc-eQTL 7.51e-01 0.0343 0.108 0.497 gdT L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 4.72e-01 0.0774 0.107 0.497 gdT L2
ENSG00000162434 JAK1 -771888 sc-eQTL 8.65e-01 -0.0183 0.108 0.497 gdT L2
ENSG00000162437 RAVER2 -449229 sc-eQTL 1.66e-01 -0.132 0.0944 0.497 gdT L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 2.50e-01 0.122 0.105 0.497 gdT L2
ENSG00000079739 PGM1 702455 sc-eQTL 7.94e-01 0.0237 0.0909 0.496 intMono L2
ENSG00000088035 ALG6 928291 sc-eQTL 4.71e-01 0.0611 0.0845 0.496 intMono L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 2.77e-01 0.0989 0.0906 0.496 intMono L2
ENSG00000162433 AK4 -851683 sc-eQTL 7.88e-01 -0.0216 0.0802 0.496 intMono L2
ENSG00000162434 JAK1 -771888 sc-eQTL 4.24e-01 -0.0593 0.0741 0.496 intMono L2
ENSG00000079739 PGM1 702455 sc-eQTL 5.18e-01 0.0539 0.0833 0.498 ncMono L2
ENSG00000088035 ALG6 928291 sc-eQTL 3.22e-01 0.0907 0.0914 0.498 ncMono L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 1.10e-01 -0.14 0.0875 0.498 ncMono L2
ENSG00000162433 AK4 -851683 sc-eQTL 2.28e-02 0.174 0.0758 0.498 ncMono L2
ENSG00000162434 JAK1 -771888 sc-eQTL 1.41e-01 -0.0913 0.0618 0.498 ncMono L2
ENSG00000079739 PGM1 702455 sc-eQTL 5.32e-01 -0.0616 0.0984 0.503 pDC L2
ENSG00000088035 ALG6 928291 sc-eQTL 5.16e-01 -0.0624 0.0958 0.503 pDC L2
ENSG00000142856 ITGB3BP 702145 sc-eQTL 7.12e-01 -0.0365 0.0986 0.503 pDC L2
ENSG00000162433 AK4 -851683 sc-eQTL 9.06e-01 -0.00707 0.0595 0.503 pDC L2
ENSG00000162434 JAK1 -771888 sc-eQTL 8.65e-01 0.0135 0.0795 0.503 pDC L2
ENSG00000162437 RAVER2 -449229 sc-eQTL 1.53e-01 -0.128 0.0889 0.503 pDC L2
ENSG00000203965 EFCAB7 772494 sc-eQTL 9.53e-01 -0.00514 0.0873 0.503 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 702455 sc-eQTL 2.07e-01 0.107 0.0848 0.496 B_Memory LOneK1K
ENSG00000088035 ALG6 928291 sc-eQTL 3.70e-01 -0.0843 0.0939 0.496 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 702145 sc-eQTL 7.24e-01 0.0307 0.0867 0.496 B_Memory LOneK1K
ENSG00000162434 JAK1 -771888 sc-eQTL 4.71e-01 0.0494 0.0684 0.496 B_Memory LOneK1K
ENSG00000203965 EFCAB7 772494 sc-eQTL 8.45e-01 0.0177 0.0904 0.496 B_Memory LOneK1K
ENSG00000079739 PGM1 702455 sc-eQTL 5.25e-03 0.25 0.0885 0.496 B_Naive LOneK1K
ENSG00000088035 ALG6 928291 sc-eQTL 6.68e-01 -0.0399 0.0928 0.496 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 702145 sc-eQTL 8.11e-01 0.0224 0.0935 0.496 B_Naive LOneK1K
ENSG00000162434 JAK1 -771888 sc-eQTL 1.30e-01 -0.103 0.0675 0.496 B_Naive LOneK1K
ENSG00000203965 EFCAB7 772494 sc-eQTL 5.67e-01 -0.0539 0.0939 0.496 B_Naive LOneK1K
ENSG00000079739 PGM1 702455 sc-eQTL 7.27e-01 0.0294 0.0841 0.496 CD14_Mono LOneK1K
ENSG00000088035 ALG6 928291 sc-eQTL 4.83e-01 -0.0572 0.0814 0.496 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 702145 sc-eQTL 6.09e-01 0.043 0.0839 0.496 CD14_Mono LOneK1K
ENSG00000162433 AK4 -851683 sc-eQTL 4.70e-01 0.0599 0.0828 0.496 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -771888 sc-eQTL 8.07e-01 -0.0169 0.0694 0.496 CD14_Mono LOneK1K
ENSG00000079739 PGM1 702455 sc-eQTL 7.00e-01 0.0309 0.0799 0.498 CD16_Mono LOneK1K
ENSG00000088035 ALG6 928291 sc-eQTL 1.89e-01 0.119 0.0904 0.498 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 702145 sc-eQTL 3.44e-01 -0.0841 0.0887 0.498 CD16_Mono LOneK1K
ENSG00000162433 AK4 -851683 sc-eQTL 5.86e-01 0.043 0.0787 0.498 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -771888 sc-eQTL 2.04e-01 -0.0672 0.0528 0.498 CD16_Mono LOneK1K
ENSG00000079739 PGM1 702455 sc-eQTL 2.84e-02 0.153 0.0694 0.496 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 928291 sc-eQTL 2.88e-01 -0.0895 0.0841 0.496 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 702145 sc-eQTL 6.73e-01 0.0377 0.0893 0.496 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -771888 sc-eQTL 7.21e-01 -0.0151 0.0424 0.496 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 772494 sc-eQTL 9.00e-01 -0.0124 0.0987 0.496 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 \N 702455 1.48e-05 3.17e-06 4.65e-07 1.99e-06 7.73e-07 4.19e-06 2.49e-06 3.24e-07 2.13e-06 6.65e-07 2.39e-06 1.15e-06 5.97e-06 1.36e-06 1e-06 2.49e-06 8.85e-07 3.49e-06 5.55e-07 6.25e-07 1.64e-06 4.13e-06 3.58e-06 5.61e-07 3.74e-06 9.28e-07 1.13e-06 9.91e-07 2.71e-06 1.67e-06 1.93e-06 3.99e-08 1.82e-07 6.86e-07 8.57e-07 5.42e-07 1.97e-07 3.37e-07 2.21e-07 1.58e-08 4.72e-08 1.28e-05 3.48e-07 1.29e-08 1.94e-07 2.45e-07 2.59e-07 0.0 5.96e-08