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Genes within 1Mb (chr1:64293239:T:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 699828 sc-eQTL 3.97e-03 0.22 0.0755 0.494 B L1
ENSG00000088035 ALG6 925664 sc-eQTL 3.04e-01 -0.082 0.0796 0.494 B L1
ENSG00000142856 ITGB3BP 699518 sc-eQTL 6.32e-01 0.0423 0.0882 0.494 B L1
ENSG00000162434 JAK1 -774515 sc-eQTL 9.02e-01 -0.00673 0.0543 0.494 B L1
ENSG00000203965 EFCAB7 769867 sc-eQTL 5.83e-01 0.0497 0.0903 0.494 B L1
ENSG00000079739 PGM1 699828 sc-eQTL 4.58e-02 0.132 0.0656 0.494 CD4T L1
ENSG00000088035 ALG6 925664 sc-eQTL 5.40e-01 0.0448 0.073 0.494 CD4T L1
ENSG00000142856 ITGB3BP 699518 sc-eQTL 5.58e-01 0.0497 0.0847 0.494 CD4T L1
ENSG00000158966 CACHD1 -176890 sc-eQTL 2.32e-01 -0.0605 0.0504 0.494 CD4T L1
ENSG00000162434 JAK1 -774515 sc-eQTL 3.21e-01 -0.0527 0.0529 0.494 CD4T L1
ENSG00000203965 EFCAB7 769867 sc-eQTL 8.90e-01 0.0105 0.0761 0.494 CD4T L1
ENSG00000079739 PGM1 699828 sc-eQTL 3.25e-02 0.156 0.0725 0.494 CD8T L1
ENSG00000088035 ALG6 925664 sc-eQTL 9.81e-01 -0.00192 0.0807 0.494 CD8T L1
ENSG00000142856 ITGB3BP 699518 sc-eQTL 7.73e-01 -0.025 0.0869 0.494 CD8T L1
ENSG00000158966 CACHD1 -176890 sc-eQTL 9.05e-01 0.00527 0.044 0.494 CD8T L1
ENSG00000162434 JAK1 -774515 sc-eQTL 2.29e-01 -0.0832 0.0691 0.494 CD8T L1
ENSG00000203965 EFCAB7 769867 sc-eQTL 9.62e-01 -0.00414 0.0866 0.494 CD8T L1
ENSG00000079739 PGM1 699828 sc-eQTL 3.99e-01 0.0694 0.082 0.495 DC L1
ENSG00000088035 ALG6 925664 sc-eQTL 2.30e-01 -0.102 0.0845 0.495 DC L1
ENSG00000142856 ITGB3BP 699518 sc-eQTL 2.66e-01 0.106 0.0948 0.495 DC L1
ENSG00000162433 AK4 -854310 sc-eQTL 2.48e-02 0.168 0.0744 0.495 DC L1
ENSG00000162434 JAK1 -774515 sc-eQTL 6.14e-01 0.0316 0.0626 0.495 DC L1
ENSG00000162437 RAVER2 -451856 sc-eQTL 9.13e-02 -0.135 0.0797 0.495 DC L1
ENSG00000203965 EFCAB7 769867 sc-eQTL 6.40e-01 0.0387 0.0827 0.495 DC L1
ENSG00000079739 PGM1 699828 sc-eQTL 5.49e-01 0.0475 0.0791 0.494 Mono L1
ENSG00000088035 ALG6 925664 sc-eQTL 7.56e-01 -0.0257 0.0826 0.494 Mono L1
ENSG00000142856 ITGB3BP 699518 sc-eQTL 9.46e-01 0.00577 0.0854 0.494 Mono L1
ENSG00000162433 AK4 -854310 sc-eQTL 4.43e-01 0.0619 0.0804 0.494 Mono L1
ENSG00000162434 JAK1 -774515 sc-eQTL 6.26e-01 -0.028 0.0574 0.494 Mono L1
ENSG00000079739 PGM1 699828 sc-eQTL 1.54e-02 0.166 0.068 0.496 NK L1
ENSG00000088035 ALG6 925664 sc-eQTL 4.57e-01 -0.0602 0.0808 0.496 NK L1
ENSG00000142856 ITGB3BP 699518 sc-eQTL 5.74e-01 0.05 0.0888 0.496 NK L1
ENSG00000162434 JAK1 -774515 sc-eQTL 9.06e-01 -0.00491 0.0414 0.496 NK L1
ENSG00000203965 EFCAB7 769867 sc-eQTL 9.31e-01 -0.00837 0.0965 0.496 NK L1
ENSG00000079739 PGM1 699828 sc-eQTL 5.57e-01 0.045 0.0766 0.494 Other_T L1
ENSG00000088035 ALG6 925664 sc-eQTL 2.18e-01 0.0947 0.0767 0.494 Other_T L1
ENSG00000142856 ITGB3BP 699518 sc-eQTL 5.44e-01 -0.0366 0.0603 0.494 Other_T L1
ENSG00000162434 JAK1 -774515 sc-eQTL 7.28e-01 -0.0204 0.0584 0.494 Other_T L1
ENSG00000162437 RAVER2 -451856 sc-eQTL 3.29e-01 0.083 0.0848 0.494 Other_T L1
ENSG00000203965 EFCAB7 769867 sc-eQTL 5.74e-02 0.176 0.0923 0.494 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 699828 sc-eQTL 3.28e-02 0.219 0.102 0.5 B_Activated L2
ENSG00000088035 ALG6 925664 sc-eQTL 7.98e-01 0.0254 0.0989 0.5 B_Activated L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 6.17e-01 -0.0473 0.0945 0.5 B_Activated L2
ENSG00000162434 JAK1 -774515 sc-eQTL 7.54e-01 -0.0296 0.0944 0.5 B_Activated L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 5.36e-01 0.0554 0.0895 0.5 B_Activated L2
ENSG00000079739 PGM1 699828 sc-eQTL 7.11e-01 0.0341 0.0918 0.494 B_Intermediate L2
ENSG00000088035 ALG6 925664 sc-eQTL 3.69e-01 -0.0839 0.0931 0.494 B_Intermediate L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 5.06e-01 0.0598 0.0898 0.494 B_Intermediate L2
ENSG00000162434 JAK1 -774515 sc-eQTL 7.56e-01 0.0242 0.0776 0.494 B_Intermediate L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 6.35e-01 0.0423 0.089 0.494 B_Intermediate L2
ENSG00000079739 PGM1 699828 sc-eQTL 6.32e-02 0.167 0.0892 0.494 B_Memory L2
ENSG00000088035 ALG6 925664 sc-eQTL 7.12e-01 -0.0338 0.0914 0.494 B_Memory L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 8.64e-01 0.016 0.0932 0.494 B_Memory L2
ENSG00000162434 JAK1 -774515 sc-eQTL 7.78e-02 0.136 0.0769 0.494 B_Memory L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 7.16e-01 -0.0338 0.0925 0.494 B_Memory L2
ENSG00000079739 PGM1 699828 sc-eQTL 1.68e-02 0.22 0.0914 0.494 B_Naive1 L2
ENSG00000088035 ALG6 925664 sc-eQTL 3.14e-01 -0.0936 0.0928 0.494 B_Naive1 L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 9.33e-01 0.00768 0.091 0.494 B_Naive1 L2
ENSG00000162434 JAK1 -774515 sc-eQTL 5.22e-01 -0.0452 0.0703 0.494 B_Naive1 L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 7.33e-01 0.0331 0.0971 0.494 B_Naive1 L2
ENSG00000079739 PGM1 699828 sc-eQTL 1.51e-02 0.218 0.0888 0.494 B_Naive2 L2
ENSG00000088035 ALG6 925664 sc-eQTL 8.45e-01 0.0184 0.0939 0.494 B_Naive2 L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 4.42e-01 0.0724 0.0941 0.494 B_Naive2 L2
ENSG00000162434 JAK1 -774515 sc-eQTL 6.24e-02 -0.136 0.0725 0.494 B_Naive2 L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 3.72e-01 -0.0837 0.0936 0.494 B_Naive2 L2
ENSG00000079739 PGM1 699828 sc-eQTL 4.11e-01 0.0782 0.0949 0.5 CD4_CTL L2
ENSG00000088035 ALG6 925664 sc-eQTL 9.55e-01 -0.00566 0.1 0.5 CD4_CTL L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 4.81e-01 -0.0685 0.0971 0.5 CD4_CTL L2
ENSG00000158966 CACHD1 -176890 sc-eQTL 6.52e-01 -0.0159 0.0353 0.5 CD4_CTL L2
ENSG00000162434 JAK1 -774515 sc-eQTL 8.30e-01 -0.0188 0.0872 0.5 CD4_CTL L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 3.57e-01 -0.085 0.0922 0.5 CD4_CTL L2
ENSG00000079739 PGM1 699828 sc-eQTL 5.37e-02 0.142 0.0734 0.494 CD4_Naive L2
ENSG00000088035 ALG6 925664 sc-eQTL 1.82e-01 0.107 0.0801 0.494 CD4_Naive L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 7.48e-01 0.0275 0.0854 0.494 CD4_Naive L2
ENSG00000158966 CACHD1 -176890 sc-eQTL 3.10e-01 -0.0514 0.0505 0.494 CD4_Naive L2
ENSG00000162434 JAK1 -774515 sc-eQTL 6.08e-01 -0.0265 0.0516 0.494 CD4_Naive L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 8.48e-01 -0.0163 0.0848 0.494 CD4_Naive L2
ENSG00000079739 PGM1 699828 sc-eQTL 1.75e-01 0.105 0.077 0.494 CD4_TCM L2
ENSG00000088035 ALG6 925664 sc-eQTL 6.92e-01 -0.0356 0.0898 0.494 CD4_TCM L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 7.61e-01 0.0278 0.0913 0.494 CD4_TCM L2
ENSG00000158966 CACHD1 -176890 sc-eQTL 7.79e-01 -0.0203 0.0723 0.494 CD4_TCM L2
ENSG00000162434 JAK1 -774515 sc-eQTL 4.52e-01 -0.0445 0.0591 0.494 CD4_TCM L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 3.16e-01 0.0887 0.0882 0.494 CD4_TCM L2
ENSG00000079739 PGM1 699828 sc-eQTL 9.76e-01 0.00277 0.0915 0.494 CD4_TEM L2
ENSG00000088035 ALG6 925664 sc-eQTL 7.42e-01 -0.0303 0.0919 0.494 CD4_TEM L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 5.23e-01 0.0574 0.0898 0.494 CD4_TEM L2
ENSG00000158966 CACHD1 -176890 sc-eQTL 8.03e-01 0.0139 0.0556 0.494 CD4_TEM L2
ENSG00000162434 JAK1 -774515 sc-eQTL 4.38e-02 -0.159 0.0783 0.494 CD4_TEM L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 8.17e-01 0.0215 0.0931 0.494 CD4_TEM L2
ENSG00000079739 PGM1 699828 sc-eQTL 1.14e-01 0.131 0.0824 0.494 CD8_CTL L2
ENSG00000088035 ALG6 925664 sc-eQTL 1.68e-01 0.121 0.0877 0.494 CD8_CTL L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 8.23e-01 0.0208 0.0926 0.494 CD8_CTL L2
ENSG00000158966 CACHD1 -176890 sc-eQTL 2.71e-01 -0.0432 0.0391 0.494 CD8_CTL L2
ENSG00000162434 JAK1 -774515 sc-eQTL 8.79e-01 0.0111 0.0733 0.494 CD8_CTL L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 3.03e-01 -0.0977 0.0946 0.494 CD8_CTL L2
ENSG00000079739 PGM1 699828 sc-eQTL 3.69e-02 0.176 0.0837 0.494 CD8_Naive L2
ENSG00000088035 ALG6 925664 sc-eQTL 9.16e-01 0.00928 0.0876 0.494 CD8_Naive L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 9.16e-01 0.00935 0.088 0.494 CD8_Naive L2
ENSG00000158966 CACHD1 -176890 sc-eQTL 8.79e-01 0.00933 0.061 0.494 CD8_Naive L2
ENSG00000162434 JAK1 -774515 sc-eQTL 1.36e-01 -0.109 0.073 0.494 CD8_Naive L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 5.78e-01 0.0462 0.0829 0.494 CD8_Naive L2
ENSG00000079739 PGM1 699828 sc-eQTL 7.23e-01 -0.0331 0.0932 0.495 CD8_TCM L2
ENSG00000088035 ALG6 925664 sc-eQTL 5.59e-01 0.0551 0.0943 0.495 CD8_TCM L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 8.24e-01 -0.0204 0.0916 0.495 CD8_TCM L2
ENSG00000158966 CACHD1 -176890 sc-eQTL 9.20e-01 0.00485 0.0481 0.495 CD8_TCM L2
ENSG00000162434 JAK1 -774515 sc-eQTL 9.17e-01 -0.00803 0.0773 0.495 CD8_TCM L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 7.91e-01 0.0248 0.0933 0.495 CD8_TCM L2
ENSG00000079739 PGM1 699828 sc-eQTL 9.70e-01 0.00353 0.095 0.502 CD8_TEM L2
ENSG00000088035 ALG6 925664 sc-eQTL 7.57e-01 -0.0295 0.0953 0.502 CD8_TEM L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 6.11e-01 0.049 0.0961 0.502 CD8_TEM L2
ENSG00000158966 CACHD1 -176890 sc-eQTL 5.37e-01 -0.0121 0.0196 0.502 CD8_TEM L2
ENSG00000162434 JAK1 -774515 sc-eQTL 2.09e-01 -0.116 0.0922 0.502 CD8_TEM L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 8.74e-01 0.0148 0.0933 0.502 CD8_TEM L2
ENSG00000079739 PGM1 699828 sc-eQTL 4.90e-01 0.0613 0.0887 0.496 MAIT L2
ENSG00000088035 ALG6 925664 sc-eQTL 2.06e-01 0.111 0.0875 0.496 MAIT L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 3.33e-01 -0.0861 0.0887 0.496 MAIT L2
ENSG00000162434 JAK1 -774515 sc-eQTL 6.69e-01 -0.0343 0.0803 0.496 MAIT L2
ENSG00000162437 RAVER2 -451856 sc-eQTL 6.82e-02 0.156 0.0849 0.496 MAIT L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 8.80e-01 0.0138 0.0916 0.496 MAIT L2
ENSG00000079739 PGM1 699828 sc-eQTL 6.27e-01 0.0443 0.091 0.493 NK_CD56bright L2
ENSG00000088035 ALG6 925664 sc-eQTL 6.36e-01 0.0442 0.0933 0.493 NK_CD56bright L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 7.67e-01 -0.0279 0.094 0.493 NK_CD56bright L2
ENSG00000162434 JAK1 -774515 sc-eQTL 5.71e-01 0.0336 0.0593 0.493 NK_CD56bright L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 5.43e-01 0.0566 0.0927 0.493 NK_CD56bright L2
ENSG00000079739 PGM1 699828 sc-eQTL 1.33e-02 0.179 0.0718 0.494 NK_CD56dim L2
ENSG00000088035 ALG6 925664 sc-eQTL 2.76e-01 -0.101 0.0922 0.494 NK_CD56dim L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 5.84e-01 0.0509 0.0929 0.494 NK_CD56dim L2
ENSG00000162434 JAK1 -774515 sc-eQTL 9.97e-01 0.000154 0.0491 0.494 NK_CD56dim L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 9.63e-01 0.0047 0.1 0.494 NK_CD56dim L2
ENSG00000079739 PGM1 699828 sc-eQTL 3.09e-01 0.0998 0.0978 0.486 NK_HLA L2
ENSG00000088035 ALG6 925664 sc-eQTL 5.91e-01 -0.0546 0.102 0.486 NK_HLA L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 6.98e-01 -0.0369 0.0949 0.486 NK_HLA L2
ENSG00000162434 JAK1 -774515 sc-eQTL 2.67e-01 0.0705 0.0633 0.486 NK_HLA L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 7.95e-01 0.0235 0.0904 0.486 NK_HLA L2
ENSG00000079739 PGM1 699828 sc-eQTL 8.22e-01 0.0177 0.0787 0.494 NK_cytokine L2
ENSG00000088035 ALG6 925664 sc-eQTL 8.76e-01 0.0139 0.0889 0.494 NK_cytokine L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 8.07e-01 0.0213 0.0873 0.494 NK_cytokine L2
ENSG00000162434 JAK1 -774515 sc-eQTL 5.65e-01 -0.0299 0.0519 0.494 NK_cytokine L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 9.68e-01 -0.00371 0.093 0.494 NK_cytokine L2
ENSG00000079739 PGM1 699828 sc-eQTL 9.00e-01 -0.0137 0.108 0.47 PB L2
ENSG00000088035 ALG6 925664 sc-eQTL 4.31e-01 -0.0896 0.113 0.47 PB L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 2.95e-01 -0.111 0.105 0.47 PB L2
ENSG00000162434 JAK1 -774515 sc-eQTL 6.04e-01 -0.0415 0.0798 0.47 PB L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 2.18e-01 0.143 0.115 0.47 PB L2
ENSG00000079739 PGM1 699828 sc-eQTL 9.87e-01 -0.0014 0.0848 0.496 Pro_T L2
ENSG00000088035 ALG6 925664 sc-eQTL 4.68e-01 0.0627 0.0862 0.496 Pro_T L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 4.60e-02 -0.151 0.0753 0.496 Pro_T L2
ENSG00000162434 JAK1 -774515 sc-eQTL 8.64e-01 -0.0103 0.06 0.496 Pro_T L2
ENSG00000162437 RAVER2 -451856 sc-eQTL 5.96e-01 0.042 0.0791 0.496 Pro_T L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 2.71e-02 0.194 0.0873 0.496 Pro_T L2
ENSG00000079739 PGM1 699828 sc-eQTL 9.77e-01 0.00257 0.0877 0.494 Treg L2
ENSG00000088035 ALG6 925664 sc-eQTL 7.57e-01 -0.029 0.0937 0.494 Treg L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 1.46e-01 0.134 0.0916 0.494 Treg L2
ENSG00000158966 CACHD1 -176890 sc-eQTL 9.12e-03 -0.18 0.0684 0.494 Treg L2
ENSG00000162434 JAK1 -774515 sc-eQTL 8.48e-02 -0.127 0.0736 0.494 Treg L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 9.30e-01 0.00778 0.088 0.494 Treg L2
ENSG00000079739 PGM1 699828 sc-eQTL 3.44e-01 0.0838 0.0884 0.498 cDC L2
ENSG00000088035 ALG6 925664 sc-eQTL 1.23e-01 -0.138 0.0892 0.498 cDC L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 4.02e-02 0.198 0.0959 0.498 cDC L2
ENSG00000162433 AK4 -854310 sc-eQTL 1.88e-03 0.249 0.0789 0.498 cDC L2
ENSG00000162434 JAK1 -774515 sc-eQTL 9.72e-01 0.00269 0.0756 0.498 cDC L2
ENSG00000162437 RAVER2 -451856 sc-eQTL 3.30e-01 -0.081 0.0829 0.498 cDC L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 9.54e-01 -0.00446 0.078 0.498 cDC L2
ENSG00000079739 PGM1 699828 sc-eQTL 1.33e-01 0.124 0.0822 0.494 cMono_IL1B L2
ENSG00000088035 ALG6 925664 sc-eQTL 8.03e-01 0.0206 0.0827 0.494 cMono_IL1B L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 8.10e-01 0.0209 0.0869 0.494 cMono_IL1B L2
ENSG00000162433 AK4 -854310 sc-eQTL 5.78e-01 0.0455 0.0817 0.494 cMono_IL1B L2
ENSG00000162434 JAK1 -774515 sc-eQTL 9.80e-01 0.00184 0.0743 0.494 cMono_IL1B L2
ENSG00000079739 PGM1 699828 sc-eQTL 6.92e-01 -0.0364 0.0918 0.494 cMono_S100A L2
ENSG00000088035 ALG6 925664 sc-eQTL 6.50e-02 -0.171 0.0924 0.494 cMono_S100A L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 5.13e-01 0.0551 0.0842 0.494 cMono_S100A L2
ENSG00000162433 AK4 -854310 sc-eQTL 8.31e-01 0.0178 0.0833 0.494 cMono_S100A L2
ENSG00000162434 JAK1 -774515 sc-eQTL 2.85e-01 -0.0822 0.0767 0.494 cMono_S100A L2
ENSG00000079739 PGM1 699828 sc-eQTL 8.13e-01 0.0241 0.102 0.494 gdT L2
ENSG00000088035 ALG6 925664 sc-eQTL 6.72e-01 0.046 0.108 0.494 gdT L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 3.40e-01 0.103 0.108 0.494 gdT L2
ENSG00000162434 JAK1 -774515 sc-eQTL 9.75e-01 0.00347 0.109 0.494 gdT L2
ENSG00000162437 RAVER2 -451856 sc-eQTL 1.51e-01 -0.137 0.0948 0.494 gdT L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 2.82e-01 0.114 0.106 0.494 gdT L2
ENSG00000079739 PGM1 699828 sc-eQTL 9.37e-01 0.00715 0.0911 0.493 intMono L2
ENSG00000088035 ALG6 925664 sc-eQTL 4.35e-01 0.0662 0.0847 0.493 intMono L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 3.30e-01 0.0887 0.0909 0.493 intMono L2
ENSG00000162433 AK4 -854310 sc-eQTL 8.53e-01 -0.0149 0.0804 0.493 intMono L2
ENSG00000162434 JAK1 -774515 sc-eQTL 4.19e-01 -0.0601 0.0743 0.493 intMono L2
ENSG00000079739 PGM1 699828 sc-eQTL 4.07e-01 0.0694 0.0836 0.495 ncMono L2
ENSG00000088035 ALG6 925664 sc-eQTL 3.43e-01 0.0872 0.0918 0.495 ncMono L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 1.33e-01 -0.133 0.088 0.495 ncMono L2
ENSG00000162433 AK4 -854310 sc-eQTL 2.06e-02 0.178 0.0761 0.495 ncMono L2
ENSG00000162434 JAK1 -774515 sc-eQTL 1.68e-01 -0.0859 0.0621 0.495 ncMono L2
ENSG00000079739 PGM1 699828 sc-eQTL 5.75e-01 -0.0557 0.0989 0.5 pDC L2
ENSG00000088035 ALG6 925664 sc-eQTL 4.41e-01 -0.0744 0.0963 0.5 pDC L2
ENSG00000142856 ITGB3BP 699518 sc-eQTL 5.91e-01 -0.0534 0.0991 0.5 pDC L2
ENSG00000162433 AK4 -854310 sc-eQTL 9.60e-01 -0.003 0.0598 0.5 pDC L2
ENSG00000162434 JAK1 -774515 sc-eQTL 6.61e-01 0.0351 0.0798 0.5 pDC L2
ENSG00000162437 RAVER2 -451856 sc-eQTL 1.44e-01 -0.131 0.0894 0.5 pDC L2
ENSG00000203965 EFCAB7 769867 sc-eQTL 8.99e-01 -0.0111 0.0878 0.5 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 699828 sc-eQTL 1.52e-01 0.122 0.0849 0.494 B_Memory LOneK1K
ENSG00000088035 ALG6 925664 sc-eQTL 3.96e-01 -0.0801 0.0942 0.494 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 699518 sc-eQTL 6.38e-01 0.041 0.0869 0.494 B_Memory LOneK1K
ENSG00000162434 JAK1 -774515 sc-eQTL 3.32e-01 0.0666 0.0685 0.494 B_Memory LOneK1K
ENSG00000203965 EFCAB7 769867 sc-eQTL 8.13e-01 0.0215 0.0906 0.494 B_Memory LOneK1K
ENSG00000079739 PGM1 699828 sc-eQTL 2.18e-03 0.274 0.0885 0.494 B_Naive LOneK1K
ENSG00000088035 ALG6 925664 sc-eQTL 6.87e-01 -0.0376 0.0931 0.494 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 699518 sc-eQTL 7.45e-01 0.0306 0.0938 0.494 B_Naive LOneK1K
ENSG00000162434 JAK1 -774515 sc-eQTL 1.52e-01 -0.0975 0.0677 0.494 B_Naive LOneK1K
ENSG00000203965 EFCAB7 769867 sc-eQTL 6.26e-01 -0.046 0.0943 0.494 B_Naive LOneK1K
ENSG00000079739 PGM1 699828 sc-eQTL 6.06e-01 0.0437 0.0844 0.494 CD14_Mono LOneK1K
ENSG00000088035 ALG6 925664 sc-eQTL 4.46e-01 -0.0623 0.0817 0.494 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 699518 sc-eQTL 5.53e-01 0.05 0.0842 0.494 CD14_Mono LOneK1K
ENSG00000162433 AK4 -854310 sc-eQTL 4.75e-01 0.0595 0.0831 0.494 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -774515 sc-eQTL 9.22e-01 -0.0068 0.0697 0.494 CD14_Mono LOneK1K
ENSG00000079739 PGM1 699828 sc-eQTL 7.22e-01 0.0286 0.0801 0.496 CD16_Mono LOneK1K
ENSG00000088035 ALG6 925664 sc-eQTL 1.83e-01 0.121 0.0906 0.496 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 699518 sc-eQTL 3.39e-01 -0.0853 0.0889 0.496 CD16_Mono LOneK1K
ENSG00000162433 AK4 -854310 sc-eQTL 5.22e-01 0.0505 0.0789 0.496 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -774515 sc-eQTL 2.28e-01 -0.0639 0.0529 0.496 CD16_Mono LOneK1K
ENSG00000079739 PGM1 699828 sc-eQTL 1.69e-02 0.167 0.0696 0.494 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 925664 sc-eQTL 3.34e-01 -0.0819 0.0845 0.494 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 699518 sc-eQTL 7.00e-01 0.0346 0.0897 0.494 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -774515 sc-eQTL 7.59e-01 -0.0131 0.0426 0.494 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 769867 sc-eQTL 9.05e-01 -0.0119 0.0991 0.494 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 \N 699828 3.02e-07 1.42e-07 6.55e-08 2.05e-07 1.02e-07 8.37e-08 1.99e-07 5.82e-08 1.59e-07 9.35e-08 1.62e-07 1.23e-07 1.95e-07 8.13e-08 5.36e-08 8.08e-08 4.35e-08 1.72e-07 7.16e-08 5.35e-08 1.18e-07 1.47e-07 1.58e-07 3.42e-08 1.85e-07 1.31e-07 1.2e-07 1.12e-07 1.31e-07 1.1e-07 1.06e-07 4.23e-08 3.38e-08 9.8e-08 3.51e-08 2.85e-08 4.62e-08 7.49e-08 6.28e-08 4.24e-08 5.94e-08 1.48e-07 3.4e-08 7.51e-09 3.55e-08 1.55e-08 7.61e-08 2.16e-09 4.98e-08
ENSG00000162433 \N -854310 2.67e-07 1.3e-07 5.35e-08 1.81e-07 1.01e-07 9.91e-08 1.61e-07 5.43e-08 1.45e-07 5.67e-08 1.55e-07 1.01e-07 1.52e-07 7.13e-08 6.18e-08 7.5e-08 4.12e-08 1.33e-07 6.07e-08 4.3e-08 1.26e-07 1.24e-07 1.45e-07 2.91e-08 1.5e-07 1.25e-07 1.13e-07 9.74e-08 1.2e-07 1e-07 9.92e-08 3.03e-08 4.02e-08 8.23e-08 5.99e-08 3.04e-08 5.37e-08 8.63e-08 6.63e-08 3.92e-08 5.37e-08 1.36e-07 5.08e-08 1.11e-08 3.83e-08 1.87e-08 1.15e-07 1.91e-09 4.99e-08