logo

Genes within 1Mb (chr1:64287822:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 694411 sc-eQTL 3.97e-03 0.22 0.0755 0.494 B L1
ENSG00000088035 ALG6 920247 sc-eQTL 3.04e-01 -0.082 0.0796 0.494 B L1
ENSG00000142856 ITGB3BP 694101 sc-eQTL 6.32e-01 0.0423 0.0882 0.494 B L1
ENSG00000162434 JAK1 -779932 sc-eQTL 9.02e-01 -0.00673 0.0543 0.494 B L1
ENSG00000203965 EFCAB7 764450 sc-eQTL 5.83e-01 0.0497 0.0903 0.494 B L1
ENSG00000079739 PGM1 694411 sc-eQTL 4.58e-02 0.132 0.0656 0.494 CD4T L1
ENSG00000088035 ALG6 920247 sc-eQTL 5.40e-01 0.0448 0.073 0.494 CD4T L1
ENSG00000142856 ITGB3BP 694101 sc-eQTL 5.58e-01 0.0497 0.0847 0.494 CD4T L1
ENSG00000158966 CACHD1 -182307 sc-eQTL 2.32e-01 -0.0605 0.0504 0.494 CD4T L1
ENSG00000162434 JAK1 -779932 sc-eQTL 3.21e-01 -0.0527 0.0529 0.494 CD4T L1
ENSG00000203965 EFCAB7 764450 sc-eQTL 8.90e-01 0.0105 0.0761 0.494 CD4T L1
ENSG00000079739 PGM1 694411 sc-eQTL 3.25e-02 0.156 0.0725 0.494 CD8T L1
ENSG00000088035 ALG6 920247 sc-eQTL 9.81e-01 -0.00192 0.0807 0.494 CD8T L1
ENSG00000142856 ITGB3BP 694101 sc-eQTL 7.73e-01 -0.025 0.0869 0.494 CD8T L1
ENSG00000158966 CACHD1 -182307 sc-eQTL 9.05e-01 0.00527 0.044 0.494 CD8T L1
ENSG00000162434 JAK1 -779932 sc-eQTL 2.29e-01 -0.0832 0.0691 0.494 CD8T L1
ENSG00000203965 EFCAB7 764450 sc-eQTL 9.62e-01 -0.00414 0.0866 0.494 CD8T L1
ENSG00000079739 PGM1 694411 sc-eQTL 3.99e-01 0.0694 0.082 0.495 DC L1
ENSG00000088035 ALG6 920247 sc-eQTL 2.30e-01 -0.102 0.0845 0.495 DC L1
ENSG00000142856 ITGB3BP 694101 sc-eQTL 2.66e-01 0.106 0.0948 0.495 DC L1
ENSG00000162433 AK4 -859727 sc-eQTL 2.48e-02 0.168 0.0744 0.495 DC L1
ENSG00000162434 JAK1 -779932 sc-eQTL 6.14e-01 0.0316 0.0626 0.495 DC L1
ENSG00000162437 RAVER2 -457273 sc-eQTL 9.13e-02 -0.135 0.0797 0.495 DC L1
ENSG00000203965 EFCAB7 764450 sc-eQTL 6.40e-01 0.0387 0.0827 0.495 DC L1
ENSG00000079739 PGM1 694411 sc-eQTL 5.49e-01 0.0475 0.0791 0.494 Mono L1
ENSG00000088035 ALG6 920247 sc-eQTL 7.56e-01 -0.0257 0.0826 0.494 Mono L1
ENSG00000142856 ITGB3BP 694101 sc-eQTL 9.46e-01 0.00577 0.0854 0.494 Mono L1
ENSG00000162433 AK4 -859727 sc-eQTL 4.43e-01 0.0619 0.0804 0.494 Mono L1
ENSG00000162434 JAK1 -779932 sc-eQTL 6.26e-01 -0.028 0.0574 0.494 Mono L1
ENSG00000079739 PGM1 694411 sc-eQTL 1.54e-02 0.166 0.068 0.496 NK L1
ENSG00000088035 ALG6 920247 sc-eQTL 4.57e-01 -0.0602 0.0808 0.496 NK L1
ENSG00000142856 ITGB3BP 694101 sc-eQTL 5.74e-01 0.05 0.0888 0.496 NK L1
ENSG00000162434 JAK1 -779932 sc-eQTL 9.06e-01 -0.00491 0.0414 0.496 NK L1
ENSG00000203965 EFCAB7 764450 sc-eQTL 9.31e-01 -0.00837 0.0965 0.496 NK L1
ENSG00000079739 PGM1 694411 sc-eQTL 5.57e-01 0.045 0.0766 0.494 Other_T L1
ENSG00000088035 ALG6 920247 sc-eQTL 2.18e-01 0.0947 0.0767 0.494 Other_T L1
ENSG00000142856 ITGB3BP 694101 sc-eQTL 5.44e-01 -0.0366 0.0603 0.494 Other_T L1
ENSG00000162434 JAK1 -779932 sc-eQTL 7.28e-01 -0.0204 0.0584 0.494 Other_T L1
ENSG00000162437 RAVER2 -457273 sc-eQTL 3.29e-01 0.083 0.0848 0.494 Other_T L1
ENSG00000203965 EFCAB7 764450 sc-eQTL 5.74e-02 0.176 0.0923 0.494 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 694411 sc-eQTL 3.28e-02 0.219 0.102 0.5 B_Activated L2
ENSG00000088035 ALG6 920247 sc-eQTL 7.98e-01 0.0254 0.0989 0.5 B_Activated L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 6.17e-01 -0.0473 0.0945 0.5 B_Activated L2
ENSG00000162434 JAK1 -779932 sc-eQTL 7.54e-01 -0.0296 0.0944 0.5 B_Activated L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 5.36e-01 0.0554 0.0895 0.5 B_Activated L2
ENSG00000079739 PGM1 694411 sc-eQTL 7.11e-01 0.0341 0.0918 0.494 B_Intermediate L2
ENSG00000088035 ALG6 920247 sc-eQTL 3.69e-01 -0.0839 0.0931 0.494 B_Intermediate L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 5.06e-01 0.0598 0.0898 0.494 B_Intermediate L2
ENSG00000162434 JAK1 -779932 sc-eQTL 7.56e-01 0.0242 0.0776 0.494 B_Intermediate L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 6.35e-01 0.0423 0.089 0.494 B_Intermediate L2
ENSG00000079739 PGM1 694411 sc-eQTL 6.32e-02 0.167 0.0892 0.494 B_Memory L2
ENSG00000088035 ALG6 920247 sc-eQTL 7.12e-01 -0.0338 0.0914 0.494 B_Memory L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 8.64e-01 0.016 0.0932 0.494 B_Memory L2
ENSG00000162434 JAK1 -779932 sc-eQTL 7.78e-02 0.136 0.0769 0.494 B_Memory L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 7.16e-01 -0.0338 0.0925 0.494 B_Memory L2
ENSG00000079739 PGM1 694411 sc-eQTL 1.68e-02 0.22 0.0914 0.494 B_Naive1 L2
ENSG00000088035 ALG6 920247 sc-eQTL 3.14e-01 -0.0936 0.0928 0.494 B_Naive1 L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 9.33e-01 0.00768 0.091 0.494 B_Naive1 L2
ENSG00000162434 JAK1 -779932 sc-eQTL 5.22e-01 -0.0452 0.0703 0.494 B_Naive1 L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 7.33e-01 0.0331 0.0971 0.494 B_Naive1 L2
ENSG00000079739 PGM1 694411 sc-eQTL 1.51e-02 0.218 0.0888 0.494 B_Naive2 L2
ENSG00000088035 ALG6 920247 sc-eQTL 8.45e-01 0.0184 0.0939 0.494 B_Naive2 L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 4.42e-01 0.0724 0.0941 0.494 B_Naive2 L2
ENSG00000162434 JAK1 -779932 sc-eQTL 6.24e-02 -0.136 0.0725 0.494 B_Naive2 L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 3.72e-01 -0.0837 0.0936 0.494 B_Naive2 L2
ENSG00000079739 PGM1 694411 sc-eQTL 4.11e-01 0.0782 0.0949 0.5 CD4_CTL L2
ENSG00000088035 ALG6 920247 sc-eQTL 9.55e-01 -0.00566 0.1 0.5 CD4_CTL L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 4.81e-01 -0.0685 0.0971 0.5 CD4_CTL L2
ENSG00000158966 CACHD1 -182307 sc-eQTL 6.52e-01 -0.0159 0.0353 0.5 CD4_CTL L2
ENSG00000162434 JAK1 -779932 sc-eQTL 8.30e-01 -0.0188 0.0872 0.5 CD4_CTL L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 3.57e-01 -0.085 0.0922 0.5 CD4_CTL L2
ENSG00000079739 PGM1 694411 sc-eQTL 5.37e-02 0.142 0.0734 0.494 CD4_Naive L2
ENSG00000088035 ALG6 920247 sc-eQTL 1.82e-01 0.107 0.0801 0.494 CD4_Naive L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 7.48e-01 0.0275 0.0854 0.494 CD4_Naive L2
ENSG00000158966 CACHD1 -182307 sc-eQTL 3.10e-01 -0.0514 0.0505 0.494 CD4_Naive L2
ENSG00000162434 JAK1 -779932 sc-eQTL 6.08e-01 -0.0265 0.0516 0.494 CD4_Naive L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 8.48e-01 -0.0163 0.0848 0.494 CD4_Naive L2
ENSG00000079739 PGM1 694411 sc-eQTL 1.75e-01 0.105 0.077 0.494 CD4_TCM L2
ENSG00000088035 ALG6 920247 sc-eQTL 6.92e-01 -0.0356 0.0898 0.494 CD4_TCM L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 7.61e-01 0.0278 0.0913 0.494 CD4_TCM L2
ENSG00000158966 CACHD1 -182307 sc-eQTL 7.79e-01 -0.0203 0.0723 0.494 CD4_TCM L2
ENSG00000162434 JAK1 -779932 sc-eQTL 4.52e-01 -0.0445 0.0591 0.494 CD4_TCM L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 3.16e-01 0.0887 0.0882 0.494 CD4_TCM L2
ENSG00000079739 PGM1 694411 sc-eQTL 9.76e-01 0.00277 0.0915 0.494 CD4_TEM L2
ENSG00000088035 ALG6 920247 sc-eQTL 7.42e-01 -0.0303 0.0919 0.494 CD4_TEM L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 5.23e-01 0.0574 0.0898 0.494 CD4_TEM L2
ENSG00000158966 CACHD1 -182307 sc-eQTL 8.03e-01 0.0139 0.0556 0.494 CD4_TEM L2
ENSG00000162434 JAK1 -779932 sc-eQTL 4.38e-02 -0.159 0.0783 0.494 CD4_TEM L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 8.17e-01 0.0215 0.0931 0.494 CD4_TEM L2
ENSG00000079739 PGM1 694411 sc-eQTL 1.14e-01 0.131 0.0824 0.494 CD8_CTL L2
ENSG00000088035 ALG6 920247 sc-eQTL 1.68e-01 0.121 0.0877 0.494 CD8_CTL L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 8.23e-01 0.0208 0.0926 0.494 CD8_CTL L2
ENSG00000158966 CACHD1 -182307 sc-eQTL 2.71e-01 -0.0432 0.0391 0.494 CD8_CTL L2
ENSG00000162434 JAK1 -779932 sc-eQTL 8.79e-01 0.0111 0.0733 0.494 CD8_CTL L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 3.03e-01 -0.0977 0.0946 0.494 CD8_CTL L2
ENSG00000079739 PGM1 694411 sc-eQTL 3.69e-02 0.176 0.0837 0.494 CD8_Naive L2
ENSG00000088035 ALG6 920247 sc-eQTL 9.16e-01 0.00928 0.0876 0.494 CD8_Naive L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 9.16e-01 0.00935 0.088 0.494 CD8_Naive L2
ENSG00000158966 CACHD1 -182307 sc-eQTL 8.79e-01 0.00933 0.061 0.494 CD8_Naive L2
ENSG00000162434 JAK1 -779932 sc-eQTL 1.36e-01 -0.109 0.073 0.494 CD8_Naive L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 5.78e-01 0.0462 0.0829 0.494 CD8_Naive L2
ENSG00000079739 PGM1 694411 sc-eQTL 7.23e-01 -0.0331 0.0932 0.495 CD8_TCM L2
ENSG00000088035 ALG6 920247 sc-eQTL 5.59e-01 0.0551 0.0943 0.495 CD8_TCM L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 8.24e-01 -0.0204 0.0916 0.495 CD8_TCM L2
ENSG00000158966 CACHD1 -182307 sc-eQTL 9.20e-01 0.00485 0.0481 0.495 CD8_TCM L2
ENSG00000162434 JAK1 -779932 sc-eQTL 9.17e-01 -0.00803 0.0773 0.495 CD8_TCM L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 7.91e-01 0.0248 0.0933 0.495 CD8_TCM L2
ENSG00000079739 PGM1 694411 sc-eQTL 9.70e-01 0.00353 0.095 0.502 CD8_TEM L2
ENSG00000088035 ALG6 920247 sc-eQTL 7.57e-01 -0.0295 0.0953 0.502 CD8_TEM L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 6.11e-01 0.049 0.0961 0.502 CD8_TEM L2
ENSG00000158966 CACHD1 -182307 sc-eQTL 5.37e-01 -0.0121 0.0196 0.502 CD8_TEM L2
ENSG00000162434 JAK1 -779932 sc-eQTL 2.09e-01 -0.116 0.0922 0.502 CD8_TEM L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 8.74e-01 0.0148 0.0933 0.502 CD8_TEM L2
ENSG00000079739 PGM1 694411 sc-eQTL 4.90e-01 0.0613 0.0887 0.496 MAIT L2
ENSG00000088035 ALG6 920247 sc-eQTL 2.06e-01 0.111 0.0875 0.496 MAIT L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 3.33e-01 -0.0861 0.0887 0.496 MAIT L2
ENSG00000162434 JAK1 -779932 sc-eQTL 6.69e-01 -0.0343 0.0803 0.496 MAIT L2
ENSG00000162437 RAVER2 -457273 sc-eQTL 6.82e-02 0.156 0.0849 0.496 MAIT L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 8.80e-01 0.0138 0.0916 0.496 MAIT L2
ENSG00000079739 PGM1 694411 sc-eQTL 6.27e-01 0.0443 0.091 0.493 NK_CD56bright L2
ENSG00000088035 ALG6 920247 sc-eQTL 6.36e-01 0.0442 0.0933 0.493 NK_CD56bright L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 7.67e-01 -0.0279 0.094 0.493 NK_CD56bright L2
ENSG00000162434 JAK1 -779932 sc-eQTL 5.71e-01 0.0336 0.0593 0.493 NK_CD56bright L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 5.43e-01 0.0566 0.0927 0.493 NK_CD56bright L2
ENSG00000079739 PGM1 694411 sc-eQTL 1.33e-02 0.179 0.0718 0.494 NK_CD56dim L2
ENSG00000088035 ALG6 920247 sc-eQTL 2.76e-01 -0.101 0.0922 0.494 NK_CD56dim L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 5.84e-01 0.0509 0.0929 0.494 NK_CD56dim L2
ENSG00000162434 JAK1 -779932 sc-eQTL 9.97e-01 0.000154 0.0491 0.494 NK_CD56dim L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 9.63e-01 0.0047 0.1 0.494 NK_CD56dim L2
ENSG00000079739 PGM1 694411 sc-eQTL 3.09e-01 0.0998 0.0978 0.486 NK_HLA L2
ENSG00000088035 ALG6 920247 sc-eQTL 5.91e-01 -0.0546 0.102 0.486 NK_HLA L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 6.98e-01 -0.0369 0.0949 0.486 NK_HLA L2
ENSG00000162434 JAK1 -779932 sc-eQTL 2.67e-01 0.0705 0.0633 0.486 NK_HLA L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 7.95e-01 0.0235 0.0904 0.486 NK_HLA L2
ENSG00000079739 PGM1 694411 sc-eQTL 8.22e-01 0.0177 0.0787 0.494 NK_cytokine L2
ENSG00000088035 ALG6 920247 sc-eQTL 8.76e-01 0.0139 0.0889 0.494 NK_cytokine L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 8.07e-01 0.0213 0.0873 0.494 NK_cytokine L2
ENSG00000162434 JAK1 -779932 sc-eQTL 5.65e-01 -0.0299 0.0519 0.494 NK_cytokine L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 9.68e-01 -0.00371 0.093 0.494 NK_cytokine L2
ENSG00000079739 PGM1 694411 sc-eQTL 9.00e-01 -0.0137 0.108 0.47 PB L2
ENSG00000088035 ALG6 920247 sc-eQTL 4.31e-01 -0.0896 0.113 0.47 PB L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 2.95e-01 -0.111 0.105 0.47 PB L2
ENSG00000162434 JAK1 -779932 sc-eQTL 6.04e-01 -0.0415 0.0798 0.47 PB L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 2.18e-01 0.143 0.115 0.47 PB L2
ENSG00000079739 PGM1 694411 sc-eQTL 9.87e-01 -0.0014 0.0848 0.496 Pro_T L2
ENSG00000088035 ALG6 920247 sc-eQTL 4.68e-01 0.0627 0.0862 0.496 Pro_T L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 4.60e-02 -0.151 0.0753 0.496 Pro_T L2
ENSG00000162434 JAK1 -779932 sc-eQTL 8.64e-01 -0.0103 0.06 0.496 Pro_T L2
ENSG00000162437 RAVER2 -457273 sc-eQTL 5.96e-01 0.042 0.0791 0.496 Pro_T L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 2.71e-02 0.194 0.0873 0.496 Pro_T L2
ENSG00000079739 PGM1 694411 sc-eQTL 9.77e-01 0.00257 0.0877 0.494 Treg L2
ENSG00000088035 ALG6 920247 sc-eQTL 7.57e-01 -0.029 0.0937 0.494 Treg L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 1.46e-01 0.134 0.0916 0.494 Treg L2
ENSG00000158966 CACHD1 -182307 sc-eQTL 9.12e-03 -0.18 0.0684 0.494 Treg L2
ENSG00000162434 JAK1 -779932 sc-eQTL 8.48e-02 -0.127 0.0736 0.494 Treg L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 9.30e-01 0.00778 0.088 0.494 Treg L2
ENSG00000079739 PGM1 694411 sc-eQTL 3.44e-01 0.0838 0.0884 0.498 cDC L2
ENSG00000088035 ALG6 920247 sc-eQTL 1.23e-01 -0.138 0.0892 0.498 cDC L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 4.02e-02 0.198 0.0959 0.498 cDC L2
ENSG00000162433 AK4 -859727 sc-eQTL 1.88e-03 0.249 0.0789 0.498 cDC L2
ENSG00000162434 JAK1 -779932 sc-eQTL 9.72e-01 0.00269 0.0756 0.498 cDC L2
ENSG00000162437 RAVER2 -457273 sc-eQTL 3.30e-01 -0.081 0.0829 0.498 cDC L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 9.54e-01 -0.00446 0.078 0.498 cDC L2
ENSG00000079739 PGM1 694411 sc-eQTL 1.33e-01 0.124 0.0822 0.494 cMono_IL1B L2
ENSG00000088035 ALG6 920247 sc-eQTL 8.03e-01 0.0206 0.0827 0.494 cMono_IL1B L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 8.10e-01 0.0209 0.0869 0.494 cMono_IL1B L2
ENSG00000162433 AK4 -859727 sc-eQTL 5.78e-01 0.0455 0.0817 0.494 cMono_IL1B L2
ENSG00000162434 JAK1 -779932 sc-eQTL 9.80e-01 0.00184 0.0743 0.494 cMono_IL1B L2
ENSG00000079739 PGM1 694411 sc-eQTL 6.92e-01 -0.0364 0.0918 0.494 cMono_S100A L2
ENSG00000088035 ALG6 920247 sc-eQTL 6.50e-02 -0.171 0.0924 0.494 cMono_S100A L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 5.13e-01 0.0551 0.0842 0.494 cMono_S100A L2
ENSG00000162433 AK4 -859727 sc-eQTL 8.31e-01 0.0178 0.0833 0.494 cMono_S100A L2
ENSG00000162434 JAK1 -779932 sc-eQTL 2.85e-01 -0.0822 0.0767 0.494 cMono_S100A L2
ENSG00000079739 PGM1 694411 sc-eQTL 8.13e-01 0.0241 0.102 0.494 gdT L2
ENSG00000088035 ALG6 920247 sc-eQTL 6.72e-01 0.046 0.108 0.494 gdT L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 3.40e-01 0.103 0.108 0.494 gdT L2
ENSG00000162434 JAK1 -779932 sc-eQTL 9.75e-01 0.00347 0.109 0.494 gdT L2
ENSG00000162437 RAVER2 -457273 sc-eQTL 1.51e-01 -0.137 0.0948 0.494 gdT L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 2.82e-01 0.114 0.106 0.494 gdT L2
ENSG00000079739 PGM1 694411 sc-eQTL 9.37e-01 0.00715 0.0911 0.493 intMono L2
ENSG00000088035 ALG6 920247 sc-eQTL 4.35e-01 0.0662 0.0847 0.493 intMono L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 3.30e-01 0.0887 0.0909 0.493 intMono L2
ENSG00000162433 AK4 -859727 sc-eQTL 8.53e-01 -0.0149 0.0804 0.493 intMono L2
ENSG00000162434 JAK1 -779932 sc-eQTL 4.19e-01 -0.0601 0.0743 0.493 intMono L2
ENSG00000079739 PGM1 694411 sc-eQTL 4.07e-01 0.0694 0.0836 0.495 ncMono L2
ENSG00000088035 ALG6 920247 sc-eQTL 3.43e-01 0.0872 0.0918 0.495 ncMono L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 1.33e-01 -0.133 0.088 0.495 ncMono L2
ENSG00000162433 AK4 -859727 sc-eQTL 2.06e-02 0.178 0.0761 0.495 ncMono L2
ENSG00000162434 JAK1 -779932 sc-eQTL 1.68e-01 -0.0859 0.0621 0.495 ncMono L2
ENSG00000079739 PGM1 694411 sc-eQTL 5.75e-01 -0.0557 0.0989 0.5 pDC L2
ENSG00000088035 ALG6 920247 sc-eQTL 4.41e-01 -0.0744 0.0963 0.5 pDC L2
ENSG00000142856 ITGB3BP 694101 sc-eQTL 5.91e-01 -0.0534 0.0991 0.5 pDC L2
ENSG00000162433 AK4 -859727 sc-eQTL 9.60e-01 -0.003 0.0598 0.5 pDC L2
ENSG00000162434 JAK1 -779932 sc-eQTL 6.61e-01 0.0351 0.0798 0.5 pDC L2
ENSG00000162437 RAVER2 -457273 sc-eQTL 1.44e-01 -0.131 0.0894 0.5 pDC L2
ENSG00000203965 EFCAB7 764450 sc-eQTL 8.99e-01 -0.0111 0.0878 0.5 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 694411 sc-eQTL 1.52e-01 0.122 0.0849 0.494 B_Memory LOneK1K
ENSG00000088035 ALG6 920247 sc-eQTL 3.96e-01 -0.0801 0.0942 0.494 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 694101 sc-eQTL 6.38e-01 0.041 0.0869 0.494 B_Memory LOneK1K
ENSG00000162434 JAK1 -779932 sc-eQTL 3.32e-01 0.0666 0.0685 0.494 B_Memory LOneK1K
ENSG00000203965 EFCAB7 764450 sc-eQTL 8.13e-01 0.0215 0.0906 0.494 B_Memory LOneK1K
ENSG00000079739 PGM1 694411 sc-eQTL 2.18e-03 0.274 0.0885 0.494 B_Naive LOneK1K
ENSG00000088035 ALG6 920247 sc-eQTL 6.87e-01 -0.0376 0.0931 0.494 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 694101 sc-eQTL 7.45e-01 0.0306 0.0938 0.494 B_Naive LOneK1K
ENSG00000162434 JAK1 -779932 sc-eQTL 1.52e-01 -0.0975 0.0677 0.494 B_Naive LOneK1K
ENSG00000203965 EFCAB7 764450 sc-eQTL 6.26e-01 -0.046 0.0943 0.494 B_Naive LOneK1K
ENSG00000079739 PGM1 694411 sc-eQTL 6.06e-01 0.0437 0.0844 0.494 CD14_Mono LOneK1K
ENSG00000088035 ALG6 920247 sc-eQTL 4.46e-01 -0.0623 0.0817 0.494 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 694101 sc-eQTL 5.53e-01 0.05 0.0842 0.494 CD14_Mono LOneK1K
ENSG00000162433 AK4 -859727 sc-eQTL 4.75e-01 0.0595 0.0831 0.494 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -779932 sc-eQTL 9.22e-01 -0.0068 0.0697 0.494 CD14_Mono LOneK1K
ENSG00000079739 PGM1 694411 sc-eQTL 7.22e-01 0.0286 0.0801 0.496 CD16_Mono LOneK1K
ENSG00000088035 ALG6 920247 sc-eQTL 1.83e-01 0.121 0.0906 0.496 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 694101 sc-eQTL 3.39e-01 -0.0853 0.0889 0.496 CD16_Mono LOneK1K
ENSG00000162433 AK4 -859727 sc-eQTL 5.22e-01 0.0505 0.0789 0.496 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -779932 sc-eQTL 2.28e-01 -0.0639 0.0529 0.496 CD16_Mono LOneK1K
ENSG00000079739 PGM1 694411 sc-eQTL 1.69e-02 0.167 0.0696 0.494 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 920247 sc-eQTL 3.34e-01 -0.0819 0.0845 0.494 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 694101 sc-eQTL 7.00e-01 0.0346 0.0897 0.494 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -779932 sc-eQTL 7.59e-01 -0.0131 0.0426 0.494 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 764450 sc-eQTL 9.05e-01 -0.0119 0.0991 0.494 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 \N 694411 4.89e-07 2.3e-07 7.97e-08 2.36e-07 1.05e-07 1.25e-07 3.25e-07 8.17e-08 2.6e-07 1.6e-07 2.68e-07 2.22e-07 3.77e-07 8.26e-08 9.12e-08 1.39e-07 9.3e-08 2.87e-07 9.97e-08 7.49e-08 1.52e-07 2.3e-07 2.11e-07 4.81e-08 3.14e-07 2.29e-07 1.74e-07 1.54e-07 1.6e-07 1.81e-07 1.43e-07 5.22e-08 4.76e-08 1.21e-07 1.01e-07 5.41e-08 6.67e-08 5.36e-08 4.74e-08 8.06e-08 5.09e-08 1.68e-07 3.37e-08 7.61e-09 3.71e-08 8.24e-09 9.19e-08 0.0 4.52e-08
ENSG00000162433 \N -859727 3.1e-07 1.53e-07 6.57e-08 2.05e-07 9.94e-08 8.89e-08 2.1e-07 5.89e-08 1.86e-07 1.03e-07 1.66e-07 1.46e-07 2.24e-07 8.07e-08 5.69e-08 9.11e-08 4.63e-08 1.8e-07 7.29e-08 5.87e-08 1.26e-07 1.7e-07 1.64e-07 3.49e-08 2.02e-07 1.65e-07 1.23e-07 1.1e-07 1.32e-07 1.06e-07 1.09e-07 3.84e-08 3.29e-08 9.52e-08 3.51e-08 3.24e-08 3.7e-08 8.17e-08 6.5e-08 4.41e-08 5.48e-08 1.48e-07 4.17e-08 1.32e-08 3.41e-08 1.01e-08 7.83e-08 2.05e-09 4.69e-08