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Genes within 1Mb (chr1:64242328:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 648917 sc-eQTL 1.56e-01 0.128 0.0897 0.718 B L1
ENSG00000088035 ALG6 874753 sc-eQTL 6.82e-01 -0.0383 0.0933 0.718 B L1
ENSG00000142856 ITGB3BP 648607 sc-eQTL 7.92e-01 -0.0272 0.103 0.718 B L1
ENSG00000162434 JAK1 -825426 sc-eQTL 9.03e-01 -0.00774 0.0636 0.718 B L1
ENSG00000203965 EFCAB7 718956 sc-eQTL 8.40e-01 -0.0213 0.106 0.718 B L1
ENSG00000079739 PGM1 648917 sc-eQTL 7.07e-01 0.029 0.0772 0.718 CD4T L1
ENSG00000088035 ALG6 874753 sc-eQTL 4.67e-01 0.062 0.0852 0.718 CD4T L1
ENSG00000142856 ITGB3BP 648607 sc-eQTL 7.56e-01 0.0308 0.0989 0.718 CD4T L1
ENSG00000158966 CACHD1 -227801 sc-eQTL 5.16e-01 -0.0383 0.059 0.718 CD4T L1
ENSG00000162434 JAK1 -825426 sc-eQTL 1.39e-01 -0.0913 0.0615 0.718 CD4T L1
ENSG00000203965 EFCAB7 718956 sc-eQTL 5.17e-01 -0.0576 0.0887 0.718 CD4T L1
ENSG00000079739 PGM1 648917 sc-eQTL 2.51e-02 0.192 0.0849 0.718 CD8T L1
ENSG00000088035 ALG6 874753 sc-eQTL 6.10e-02 0.177 0.0939 0.718 CD8T L1
ENSG00000142856 ITGB3BP 648607 sc-eQTL 4.13e-01 -0.0836 0.102 0.718 CD8T L1
ENSG00000158966 CACHD1 -227801 sc-eQTL 2.82e-01 0.0555 0.0514 0.718 CD8T L1
ENSG00000162434 JAK1 -825426 sc-eQTL 1.77e-01 -0.11 0.0809 0.718 CD8T L1
ENSG00000203965 EFCAB7 718956 sc-eQTL 7.72e-01 -0.0295 0.102 0.718 CD8T L1
ENSG00000079739 PGM1 648917 sc-eQTL 6.38e-01 0.0459 0.0973 0.723 DC L1
ENSG00000088035 ALG6 874753 sc-eQTL 8.17e-01 0.0233 0.101 0.723 DC L1
ENSG00000142856 ITGB3BP 648607 sc-eQTL 2.36e-01 0.133 0.112 0.723 DC L1
ENSG00000162433 AK4 -905221 sc-eQTL 2.87e-01 0.0951 0.089 0.723 DC L1
ENSG00000162434 JAK1 -825426 sc-eQTL 9.58e-01 0.00396 0.0742 0.723 DC L1
ENSG00000162437 RAVER2 -502767 sc-eQTL 8.32e-01 0.0201 0.0951 0.723 DC L1
ENSG00000203965 EFCAB7 718956 sc-eQTL 5.34e-02 0.189 0.0972 0.723 DC L1
ENSG00000079739 PGM1 648917 sc-eQTL 2.68e-01 0.104 0.0939 0.718 Mono L1
ENSG00000088035 ALG6 874753 sc-eQTL 9.12e-01 -0.0109 0.0983 0.718 Mono L1
ENSG00000142856 ITGB3BP 648607 sc-eQTL 9.90e-01 0.00133 0.102 0.718 Mono L1
ENSG00000162433 AK4 -905221 sc-eQTL 2.84e-01 0.103 0.0955 0.718 Mono L1
ENSG00000162434 JAK1 -825426 sc-eQTL 7.64e-01 -0.0205 0.0683 0.718 Mono L1
ENSG00000079739 PGM1 648917 sc-eQTL 4.66e-01 0.0584 0.0801 0.719 NK L1
ENSG00000088035 ALG6 874753 sc-eQTL 9.86e-01 -0.0016 0.094 0.719 NK L1
ENSG00000142856 ITGB3BP 648607 sc-eQTL 1.41e-01 -0.152 0.103 0.719 NK L1
ENSG00000162434 JAK1 -825426 sc-eQTL 2.90e-01 0.051 0.048 0.719 NK L1
ENSG00000203965 EFCAB7 718956 sc-eQTL 9.27e-01 -0.0102 0.112 0.719 NK L1
ENSG00000079739 PGM1 648917 sc-eQTL 7.09e-01 -0.0342 0.0915 0.718 Other_T L1
ENSG00000088035 ALG6 874753 sc-eQTL 1.02e-01 0.15 0.0914 0.718 Other_T L1
ENSG00000142856 ITGB3BP 648607 sc-eQTL 2.61e-01 -0.0809 0.0719 0.718 Other_T L1
ENSG00000162434 JAK1 -825426 sc-eQTL 4.29e-01 -0.0552 0.0697 0.718 Other_T L1
ENSG00000162437 RAVER2 -502767 sc-eQTL 4.95e-01 0.0692 0.101 0.718 Other_T L1
ENSG00000203965 EFCAB7 718956 sc-eQTL 4.76e-01 0.0793 0.111 0.718 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 648917 sc-eQTL 5.79e-03 0.342 0.122 0.722 B_Activated L2
ENSG00000088035 ALG6 874753 sc-eQTL 8.45e-01 -0.0235 0.12 0.722 B_Activated L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 6.23e-01 -0.0565 0.115 0.722 B_Activated L2
ENSG00000162434 JAK1 -825426 sc-eQTL 7.03e-01 0.0436 0.114 0.722 B_Activated L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 9.01e-02 0.184 0.108 0.722 B_Activated L2
ENSG00000079739 PGM1 648917 sc-eQTL 8.66e-01 -0.0185 0.11 0.719 B_Intermediate L2
ENSG00000088035 ALG6 874753 sc-eQTL 6.69e-01 0.0477 0.111 0.719 B_Intermediate L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 3.84e-01 0.0935 0.107 0.719 B_Intermediate L2
ENSG00000162434 JAK1 -825426 sc-eQTL 6.94e-01 -0.0365 0.0926 0.719 B_Intermediate L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 4.74e-01 -0.0762 0.106 0.719 B_Intermediate L2
ENSG00000079739 PGM1 648917 sc-eQTL 3.33e-01 0.102 0.106 0.718 B_Memory L2
ENSG00000088035 ALG6 874753 sc-eQTL 8.49e-01 -0.0205 0.108 0.718 B_Memory L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 5.97e-01 0.058 0.11 0.718 B_Memory L2
ENSG00000162434 JAK1 -825426 sc-eQTL 5.15e-01 0.0594 0.0911 0.718 B_Memory L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 9.75e-01 0.0034 0.109 0.718 B_Memory L2
ENSG00000079739 PGM1 648917 sc-eQTL 1.62e-01 0.152 0.109 0.718 B_Naive1 L2
ENSG00000088035 ALG6 874753 sc-eQTL 9.00e-01 -0.0139 0.11 0.718 B_Naive1 L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 1.88e-01 -0.141 0.107 0.718 B_Naive1 L2
ENSG00000162434 JAK1 -825426 sc-eQTL 2.25e-01 -0.101 0.0827 0.718 B_Naive1 L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 4.79e-01 -0.0811 0.114 0.718 B_Naive1 L2
ENSG00000079739 PGM1 648917 sc-eQTL 4.99e-01 0.0723 0.107 0.717 B_Naive2 L2
ENSG00000088035 ALG6 874753 sc-eQTL 4.21e-01 0.0897 0.111 0.717 B_Naive2 L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 7.31e-01 -0.0385 0.112 0.717 B_Naive2 L2
ENSG00000162434 JAK1 -825426 sc-eQTL 1.40e-01 -0.128 0.0862 0.717 B_Naive2 L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 6.21e-01 -0.0551 0.111 0.717 B_Naive2 L2
ENSG00000079739 PGM1 648917 sc-eQTL 9.51e-01 -0.00672 0.108 0.723 CD4_CTL L2
ENSG00000088035 ALG6 874753 sc-eQTL 5.90e-01 -0.0617 0.114 0.723 CD4_CTL L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 6.93e-01 0.0437 0.111 0.723 CD4_CTL L2
ENSG00000158966 CACHD1 -227801 sc-eQTL 5.67e-01 0.023 0.0402 0.723 CD4_CTL L2
ENSG00000162434 JAK1 -825426 sc-eQTL 5.21e-01 0.0637 0.099 0.723 CD4_CTL L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 3.89e-02 -0.216 0.104 0.723 CD4_CTL L2
ENSG00000079739 PGM1 648917 sc-eQTL 3.62e-01 0.0798 0.0873 0.718 CD4_Naive L2
ENSG00000088035 ALG6 874753 sc-eQTL 2.36e-01 0.113 0.0947 0.718 CD4_Naive L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 7.50e-01 -0.0322 0.101 0.718 CD4_Naive L2
ENSG00000158966 CACHD1 -227801 sc-eQTL 5.06e-01 -0.0398 0.0597 0.718 CD4_Naive L2
ENSG00000162434 JAK1 -825426 sc-eQTL 6.20e-01 -0.0303 0.061 0.718 CD4_Naive L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 4.06e-01 -0.0833 0.1 0.718 CD4_Naive L2
ENSG00000079739 PGM1 648917 sc-eQTL 9.37e-01 -0.0071 0.0903 0.718 CD4_TCM L2
ENSG00000088035 ALG6 874753 sc-eQTL 5.99e-01 -0.0553 0.105 0.718 CD4_TCM L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 6.27e-01 0.0519 0.107 0.718 CD4_TCM L2
ENSG00000158966 CACHD1 -227801 sc-eQTL 2.73e-01 -0.0927 0.0843 0.718 CD4_TCM L2
ENSG00000162434 JAK1 -825426 sc-eQTL 9.37e-02 -0.116 0.0687 0.718 CD4_TCM L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 5.02e-01 0.0693 0.103 0.718 CD4_TCM L2
ENSG00000079739 PGM1 648917 sc-eQTL 8.56e-01 -0.0194 0.107 0.718 CD4_TEM L2
ENSG00000088035 ALG6 874753 sc-eQTL 6.26e-01 -0.0525 0.107 0.718 CD4_TEM L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 4.76e-01 0.075 0.105 0.718 CD4_TEM L2
ENSG00000158966 CACHD1 -227801 sc-eQTL 1.47e-01 0.094 0.0647 0.718 CD4_TEM L2
ENSG00000162434 JAK1 -825426 sc-eQTL 1.31e-01 -0.139 0.0919 0.718 CD4_TEM L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 3.50e-01 -0.102 0.109 0.718 CD4_TEM L2
ENSG00000079739 PGM1 648917 sc-eQTL 1.32e-01 0.146 0.0967 0.718 CD8_CTL L2
ENSG00000088035 ALG6 874753 sc-eQTL 3.66e-02 0.215 0.102 0.718 CD8_CTL L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 7.57e-01 -0.0336 0.109 0.718 CD8_CTL L2
ENSG00000158966 CACHD1 -227801 sc-eQTL 4.51e-01 -0.0347 0.046 0.718 CD8_CTL L2
ENSG00000162434 JAK1 -825426 sc-eQTL 3.38e-01 -0.0824 0.0858 0.718 CD8_CTL L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 2.46e-01 -0.129 0.111 0.718 CD8_CTL L2
ENSG00000079739 PGM1 648917 sc-eQTL 3.00e-02 0.213 0.0973 0.718 CD8_Naive L2
ENSG00000088035 ALG6 874753 sc-eQTL 3.00e-02 0.22 0.101 0.718 CD8_Naive L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 6.48e-01 -0.0468 0.102 0.718 CD8_Naive L2
ENSG00000158966 CACHD1 -227801 sc-eQTL 4.73e-01 0.051 0.0709 0.718 CD8_Naive L2
ENSG00000162434 JAK1 -825426 sc-eQTL 6.03e-01 -0.0444 0.0853 0.718 CD8_Naive L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 3.69e-01 0.0867 0.0963 0.718 CD8_Naive L2
ENSG00000079739 PGM1 648917 sc-eQTL 8.81e-01 0.0162 0.108 0.713 CD8_TCM L2
ENSG00000088035 ALG6 874753 sc-eQTL 5.36e-01 0.068 0.11 0.713 CD8_TCM L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 4.27e-01 -0.0846 0.106 0.713 CD8_TCM L2
ENSG00000158966 CACHD1 -227801 sc-eQTL 4.81e-01 -0.0394 0.0558 0.713 CD8_TCM L2
ENSG00000162434 JAK1 -825426 sc-eQTL 8.80e-01 -0.0135 0.0899 0.713 CD8_TCM L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 5.21e-01 0.0697 0.108 0.713 CD8_TCM L2
ENSG00000079739 PGM1 648917 sc-eQTL 9.42e-01 0.00827 0.113 0.724 CD8_TEM L2
ENSG00000088035 ALG6 874753 sc-eQTL 2.81e-01 0.123 0.113 0.724 CD8_TEM L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 1.08e-01 0.184 0.114 0.724 CD8_TEM L2
ENSG00000158966 CACHD1 -227801 sc-eQTL 2.47e-01 -0.0271 0.0233 0.724 CD8_TEM L2
ENSG00000162434 JAK1 -825426 sc-eQTL 2.03e-01 -0.141 0.11 0.724 CD8_TEM L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 9.99e-01 0.000209 0.111 0.724 CD8_TEM L2
ENSG00000079739 PGM1 648917 sc-eQTL 9.33e-01 0.00894 0.106 0.721 MAIT L2
ENSG00000088035 ALG6 874753 sc-eQTL 8.93e-01 -0.0141 0.105 0.721 MAIT L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 1.45e-01 -0.154 0.105 0.721 MAIT L2
ENSG00000162434 JAK1 -825426 sc-eQTL 5.44e-01 -0.058 0.0956 0.721 MAIT L2
ENSG00000162437 RAVER2 -502767 sc-eQTL 4.33e-01 0.0799 0.102 0.721 MAIT L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 8.33e-01 -0.023 0.109 0.721 MAIT L2
ENSG00000079739 PGM1 648917 sc-eQTL 9.84e-01 0.00209 0.105 0.713 NK_CD56bright L2
ENSG00000088035 ALG6 874753 sc-eQTL 7.07e-02 0.194 0.107 0.713 NK_CD56bright L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 1.48e-01 0.157 0.108 0.713 NK_CD56bright L2
ENSG00000162434 JAK1 -825426 sc-eQTL 8.33e-01 0.0144 0.0685 0.713 NK_CD56bright L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 5.06e-01 -0.0714 0.107 0.713 NK_CD56bright L2
ENSG00000079739 PGM1 648917 sc-eQTL 1.65e-01 0.117 0.0843 0.718 NK_CD56dim L2
ENSG00000088035 ALG6 874753 sc-eQTL 2.02e-01 -0.137 0.107 0.718 NK_CD56dim L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 1.96e-01 -0.14 0.108 0.718 NK_CD56dim L2
ENSG00000162434 JAK1 -825426 sc-eQTL 5.04e-01 0.0381 0.057 0.718 NK_CD56dim L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 2.70e-01 0.129 0.116 0.718 NK_CD56dim L2
ENSG00000079739 PGM1 648917 sc-eQTL 5.34e-01 0.0696 0.112 0.715 NK_HLA L2
ENSG00000088035 ALG6 874753 sc-eQTL 4.81e-01 -0.0818 0.116 0.715 NK_HLA L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 4.25e-01 -0.0863 0.108 0.715 NK_HLA L2
ENSG00000162434 JAK1 -825426 sc-eQTL 8.70e-01 0.0118 0.0724 0.715 NK_HLA L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 3.11e-01 0.104 0.103 0.715 NK_HLA L2
ENSG00000079739 PGM1 648917 sc-eQTL 8.77e-01 -0.014 0.0905 0.718 NK_cytokine L2
ENSG00000088035 ALG6 874753 sc-eQTL 6.85e-01 0.0415 0.102 0.718 NK_cytokine L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 2.19e-01 -0.123 0.1 0.718 NK_cytokine L2
ENSG00000162434 JAK1 -825426 sc-eQTL 3.76e-01 0.0529 0.0596 0.718 NK_cytokine L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 9.66e-01 -0.00454 0.107 0.718 NK_cytokine L2
ENSG00000079739 PGM1 648917 sc-eQTL 8.72e-01 0.0211 0.131 0.711 PB L2
ENSG00000088035 ALG6 874753 sc-eQTL 2.74e-01 -0.15 0.137 0.711 PB L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 2.62e-01 -0.144 0.127 0.711 PB L2
ENSG00000162434 JAK1 -825426 sc-eQTL 7.95e-01 -0.0252 0.0966 0.711 PB L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 9.07e-01 -0.0165 0.141 0.711 PB L2
ENSG00000079739 PGM1 648917 sc-eQTL 5.10e-02 -0.194 0.0989 0.715 Pro_T L2
ENSG00000088035 ALG6 874753 sc-eQTL 2.24e-01 0.123 0.101 0.715 Pro_T L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 4.27e-01 0.0711 0.0894 0.715 Pro_T L2
ENSG00000162434 JAK1 -825426 sc-eQTL 3.64e-01 -0.064 0.0704 0.715 Pro_T L2
ENSG00000162437 RAVER2 -502767 sc-eQTL 2.00e-01 0.119 0.0928 0.715 Pro_T L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 2.82e-01 0.112 0.104 0.715 Pro_T L2
ENSG00000079739 PGM1 648917 sc-eQTL 9.53e-01 0.00612 0.104 0.718 Treg L2
ENSG00000088035 ALG6 874753 sc-eQTL 6.88e-01 -0.0445 0.111 0.718 Treg L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 2.69e-01 0.12 0.108 0.718 Treg L2
ENSG00000158966 CACHD1 -227801 sc-eQTL 3.21e-02 -0.175 0.0812 0.718 Treg L2
ENSG00000162434 JAK1 -825426 sc-eQTL 6.52e-02 -0.161 0.0868 0.718 Treg L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 8.31e-01 -0.0222 0.104 0.718 Treg L2
ENSG00000079739 PGM1 648917 sc-eQTL 5.21e-01 0.0677 0.105 0.72 cDC L2
ENSG00000088035 ALG6 874753 sc-eQTL 4.09e-01 -0.0883 0.107 0.72 cDC L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 7.16e-02 0.207 0.114 0.72 cDC L2
ENSG00000162433 AK4 -905221 sc-eQTL 1.19e-02 0.241 0.0947 0.72 cDC L2
ENSG00000162434 JAK1 -825426 sc-eQTL 3.83e-01 0.0784 0.0898 0.72 cDC L2
ENSG00000162437 RAVER2 -502767 sc-eQTL 9.82e-01 0.0023 0.0989 0.72 cDC L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 6.49e-01 0.0423 0.0927 0.72 cDC L2
ENSG00000079739 PGM1 648917 sc-eQTL 3.18e-01 0.098 0.0979 0.718 cMono_IL1B L2
ENSG00000088035 ALG6 874753 sc-eQTL 9.44e-01 -0.00692 0.0982 0.718 cMono_IL1B L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 4.02e-01 -0.0864 0.103 0.718 cMono_IL1B L2
ENSG00000162433 AK4 -905221 sc-eQTL 9.96e-01 0.000476 0.097 0.718 cMono_IL1B L2
ENSG00000162434 JAK1 -825426 sc-eQTL 9.40e-01 0.00667 0.0882 0.718 cMono_IL1B L2
ENSG00000079739 PGM1 648917 sc-eQTL 1.31e-01 0.163 0.107 0.718 cMono_S100A L2
ENSG00000088035 ALG6 874753 sc-eQTL 2.88e-01 -0.116 0.109 0.718 cMono_S100A L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 3.67e-01 0.0894 0.0989 0.718 cMono_S100A L2
ENSG00000162433 AK4 -905221 sc-eQTL 6.35e-01 0.0466 0.0978 0.718 cMono_S100A L2
ENSG00000162434 JAK1 -825426 sc-eQTL 8.99e-01 -0.0115 0.0903 0.718 cMono_S100A L2
ENSG00000079739 PGM1 648917 sc-eQTL 7.51e-01 0.0392 0.123 0.715 gdT L2
ENSG00000088035 ALG6 874753 sc-eQTL 8.45e-01 -0.0257 0.131 0.715 gdT L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 8.96e-01 0.0171 0.131 0.715 gdT L2
ENSG00000162434 JAK1 -825426 sc-eQTL 3.81e-01 -0.115 0.131 0.715 gdT L2
ENSG00000162437 RAVER2 -502767 sc-eQTL 2.06e-01 -0.146 0.115 0.715 gdT L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 3.31e-01 0.125 0.128 0.715 gdT L2
ENSG00000079739 PGM1 648917 sc-eQTL 1.08e-01 0.175 0.108 0.72 intMono L2
ENSG00000088035 ALG6 874753 sc-eQTL 6.65e-01 0.044 0.102 0.72 intMono L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 4.97e-01 -0.0742 0.109 0.72 intMono L2
ENSG00000162433 AK4 -905221 sc-eQTL 3.46e-01 0.0909 0.0961 0.72 intMono L2
ENSG00000162434 JAK1 -825426 sc-eQTL 5.77e-01 -0.0497 0.089 0.72 intMono L2
ENSG00000079739 PGM1 648917 sc-eQTL 6.59e-01 0.0433 0.0979 0.715 ncMono L2
ENSG00000088035 ALG6 874753 sc-eQTL 4.00e-01 0.0907 0.107 0.715 ncMono L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 4.70e-01 0.0749 0.103 0.715 ncMono L2
ENSG00000162433 AK4 -905221 sc-eQTL 7.29e-02 0.161 0.0896 0.715 ncMono L2
ENSG00000162434 JAK1 -825426 sc-eQTL 1.05e-02 -0.186 0.0718 0.715 ncMono L2
ENSG00000079739 PGM1 648917 sc-eQTL 3.33e-01 -0.117 0.121 0.718 pDC L2
ENSG00000088035 ALG6 874753 sc-eQTL 2.77e-01 0.128 0.118 0.718 pDC L2
ENSG00000142856 ITGB3BP 648607 sc-eQTL 3.02e-01 -0.125 0.121 0.718 pDC L2
ENSG00000162433 AK4 -905221 sc-eQTL 9.17e-01 -0.00761 0.0732 0.718 pDC L2
ENSG00000162434 JAK1 -825426 sc-eQTL 1.70e-01 -0.134 0.0971 0.718 pDC L2
ENSG00000162437 RAVER2 -502767 sc-eQTL 2.46e-01 0.128 0.11 0.718 pDC L2
ENSG00000203965 EFCAB7 718956 sc-eQTL 8.31e-02 0.185 0.106 0.718 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 648917 sc-eQTL 2.75e-01 0.109 0.0999 0.718 B_Memory LOneK1K
ENSG00000088035 ALG6 874753 sc-eQTL 7.79e-01 0.0312 0.111 0.718 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 648607 sc-eQTL 5.22e-01 0.0654 0.102 0.718 B_Memory LOneK1K
ENSG00000162434 JAK1 -825426 sc-eQTL 3.29e-01 0.0787 0.0804 0.718 B_Memory LOneK1K
ENSG00000203965 EFCAB7 718956 sc-eQTL 7.71e-01 -0.031 0.106 0.718 B_Memory LOneK1K
ENSG00000079739 PGM1 648917 sc-eQTL 1.64e-01 0.147 0.105 0.718 B_Naive LOneK1K
ENSG00000088035 ALG6 874753 sc-eQTL 6.20e-01 0.054 0.109 0.718 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 648607 sc-eQTL 2.43e-01 -0.128 0.109 0.718 B_Naive LOneK1K
ENSG00000162434 JAK1 -825426 sc-eQTL 1.09e-01 -0.127 0.079 0.718 B_Naive LOneK1K
ENSG00000203965 EFCAB7 718956 sc-eQTL 4.40e-01 -0.0851 0.11 0.718 B_Naive LOneK1K
ENSG00000079739 PGM1 648917 sc-eQTL 3.32e-01 0.0966 0.0994 0.718 CD14_Mono LOneK1K
ENSG00000088035 ALG6 874753 sc-eQTL 7.49e-01 -0.0309 0.0964 0.718 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 648607 sc-eQTL 9.53e-01 0.00585 0.0993 0.718 CD14_Mono LOneK1K
ENSG00000162433 AK4 -905221 sc-eQTL 4.13e-01 0.0805 0.098 0.718 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -825426 sc-eQTL 8.71e-01 0.0134 0.0821 0.718 CD14_Mono LOneK1K
ENSG00000079739 PGM1 648917 sc-eQTL 1.95e-01 0.123 0.0949 0.72 CD16_Mono LOneK1K
ENSG00000088035 ALG6 874753 sc-eQTL 1.84e-01 0.144 0.108 0.72 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 648607 sc-eQTL 7.00e-01 -0.0408 0.106 0.72 CD16_Mono LOneK1K
ENSG00000162433 AK4 -905221 sc-eQTL 1.44e-01 0.137 0.0933 0.72 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -825426 sc-eQTL 2.79e-02 -0.138 0.0624 0.72 CD16_Mono LOneK1K
ENSG00000079739 PGM1 648917 sc-eQTL 3.64e-01 0.0747 0.0822 0.718 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 874753 sc-eQTL 3.83e-01 -0.0863 0.0987 0.718 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 648607 sc-eQTL 4.77e-02 -0.207 0.104 0.718 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -825426 sc-eQTL 4.14e-01 0.0406 0.0497 0.718 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 718956 sc-eQTL 5.55e-01 0.0684 0.116 0.718 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000185483 ROR1 468311 pQTL 5.29e-06 0.0654 0.0143 0.0 0.0 0.301

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162433 \N -905221 2.67e-07 1.19e-07 3.59e-08 1.8e-07 9.01e-08 9.8e-08 1.44e-07 5.19e-08 1.4e-07 4.57e-08 1.62e-07 8.14e-08 1.41e-07 6.56e-08 5.84e-08 7.26e-08 3.9e-08 1.14e-07 5.36e-08 4.42e-08 1.04e-07 1.26e-07 1.32e-07 4.05e-08 1.37e-07 1.16e-07 1.08e-07 9.32e-08 1.05e-07 1.1e-07 9.73e-08 3.92e-08 3.26e-08 8.68e-08 7.66e-08 3.76e-08 5.01e-08 9.25e-08 6.78e-08 3.77e-08 3.92e-08 1.33e-07 3.99e-08 1.81e-08 5.87e-08 1.83e-08 1.22e-07 3.89e-09 4.73e-08