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Genes within 1Mb (chr1:64241060:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 647649 sc-eQTL 3.36e-02 0.167 0.0783 0.489 B L1
ENSG00000088035 ALG6 873485 sc-eQTL 8.27e-01 -0.018 0.082 0.489 B L1
ENSG00000142856 ITGB3BP 647339 sc-eQTL 8.16e-01 0.0211 0.0907 0.489 B L1
ENSG00000162434 JAK1 -826694 sc-eQTL 6.92e-01 -0.0221 0.0558 0.489 B L1
ENSG00000203965 EFCAB7 717688 sc-eQTL 4.95e-01 0.0634 0.0928 0.489 B L1
ENSG00000079739 PGM1 647649 sc-eQTL 1.51e-01 0.0971 0.0674 0.489 CD4T L1
ENSG00000088035 ALG6 873485 sc-eQTL 5.17e-01 0.0485 0.0747 0.489 CD4T L1
ENSG00000142856 ITGB3BP 647339 sc-eQTL 2.83e-01 0.0931 0.0865 0.489 CD4T L1
ENSG00000158966 CACHD1 -229069 sc-eQTL 1.05e-01 -0.0836 0.0514 0.489 CD4T L1
ENSG00000162434 JAK1 -826694 sc-eQTL 6.54e-02 -0.0997 0.0538 0.489 CD4T L1
ENSG00000203965 EFCAB7 717688 sc-eQTL 7.55e-01 -0.0243 0.0779 0.489 CD4T L1
ENSG00000079739 PGM1 647649 sc-eQTL 6.22e-02 0.14 0.0746 0.489 CD8T L1
ENSG00000088035 ALG6 873485 sc-eQTL 8.12e-01 0.0197 0.0829 0.489 CD8T L1
ENSG00000142856 ITGB3BP 647339 sc-eQTL 6.11e-01 -0.0455 0.0892 0.489 CD8T L1
ENSG00000158966 CACHD1 -229069 sc-eQTL 8.65e-01 0.0077 0.0452 0.489 CD8T L1
ENSG00000162434 JAK1 -826694 sc-eQTL 2.22e-01 -0.0869 0.0709 0.489 CD8T L1
ENSG00000203965 EFCAB7 717688 sc-eQTL 7.86e-01 0.0242 0.089 0.489 CD8T L1
ENSG00000079739 PGM1 647649 sc-eQTL 1.04e-01 0.136 0.0831 0.493 DC L1
ENSG00000088035 ALG6 873485 sc-eQTL 4.98e-01 -0.0585 0.0863 0.493 DC L1
ENSG00000142856 ITGB3BP 647339 sc-eQTL 2.32e-01 0.116 0.0965 0.493 DC L1
ENSG00000162433 AK4 -906489 sc-eQTL 3.73e-02 0.159 0.0758 0.493 DC L1
ENSG00000162434 JAK1 -826694 sc-eQTL 1.81e-01 0.0853 0.0635 0.493 DC L1
ENSG00000162437 RAVER2 -504035 sc-eQTL 3.07e-01 -0.0835 0.0815 0.493 DC L1
ENSG00000203965 EFCAB7 717688 sc-eQTL 2.75e-01 0.092 0.084 0.493 DC L1
ENSG00000079739 PGM1 647649 sc-eQTL 5.24e-01 0.0521 0.0816 0.489 Mono L1
ENSG00000088035 ALG6 873485 sc-eQTL 9.00e-01 -0.0107 0.0853 0.489 Mono L1
ENSG00000142856 ITGB3BP 647339 sc-eQTL 5.03e-01 -0.0591 0.088 0.489 Mono L1
ENSG00000162433 AK4 -906489 sc-eQTL 5.88e-01 0.045 0.083 0.489 Mono L1
ENSG00000162434 JAK1 -826694 sc-eQTL 4.51e-01 -0.0447 0.0592 0.489 Mono L1
ENSG00000079739 PGM1 647649 sc-eQTL 1.37e-01 0.104 0.0699 0.491 NK L1
ENSG00000088035 ALG6 873485 sc-eQTL 4.44e-01 -0.0631 0.0823 0.491 NK L1
ENSG00000142856 ITGB3BP 647339 sc-eQTL 5.12e-01 0.0595 0.0905 0.491 NK L1
ENSG00000162434 JAK1 -826694 sc-eQTL 8.40e-01 -0.00851 0.0422 0.491 NK L1
ENSG00000203965 EFCAB7 717688 sc-eQTL 9.15e-01 -0.0105 0.0983 0.491 NK L1
ENSG00000079739 PGM1 647649 sc-eQTL 3.84e-01 0.0685 0.0786 0.489 Other_T L1
ENSG00000088035 ALG6 873485 sc-eQTL 2.04e-01 0.1 0.0788 0.489 Other_T L1
ENSG00000142856 ITGB3BP 647339 sc-eQTL 9.22e-01 0.00606 0.062 0.489 Other_T L1
ENSG00000162434 JAK1 -826694 sc-eQTL 8.08e-01 -0.0146 0.0601 0.489 Other_T L1
ENSG00000162437 RAVER2 -504035 sc-eQTL 3.98e-01 0.0738 0.0871 0.489 Other_T L1
ENSG00000203965 EFCAB7 717688 sc-eQTL 1.87e-02 0.224 0.0944 0.489 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 647649 sc-eQTL 2.38e-02 0.237 0.104 0.492 B_Activated L2
ENSG00000088035 ALG6 873485 sc-eQTL 6.04e-01 0.0526 0.101 0.492 B_Activated L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 8.97e-01 -0.0125 0.0968 0.492 B_Activated L2
ENSG00000162434 JAK1 -826694 sc-eQTL 1.00e+00 4.95e-05 0.0966 0.492 B_Activated L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 1.41e-01 0.135 0.0911 0.492 B_Activated L2
ENSG00000079739 PGM1 647649 sc-eQTL 7.55e-01 -0.0294 0.0941 0.489 B_Intermediate L2
ENSG00000088035 ALG6 873485 sc-eQTL 7.20e-01 -0.0344 0.0956 0.489 B_Intermediate L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 6.36e-01 0.0436 0.092 0.489 B_Intermediate L2
ENSG00000162434 JAK1 -826694 sc-eQTL 5.57e-01 0.0467 0.0794 0.489 B_Intermediate L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 5.39e-01 0.0561 0.0911 0.489 B_Intermediate L2
ENSG00000079739 PGM1 647649 sc-eQTL 6.65e-02 0.169 0.0916 0.489 B_Memory L2
ENSG00000088035 ALG6 873485 sc-eQTL 9.78e-01 0.00254 0.0939 0.489 B_Memory L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 7.82e-01 -0.0266 0.0957 0.489 B_Memory L2
ENSG00000162434 JAK1 -826694 sc-eQTL 1.26e-01 0.121 0.0791 0.489 B_Memory L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 8.31e-01 0.0203 0.095 0.489 B_Memory L2
ENSG00000079739 PGM1 647649 sc-eQTL 2.40e-02 0.212 0.0935 0.489 B_Naive1 L2
ENSG00000088035 ALG6 873485 sc-eQTL 9.30e-01 -0.00833 0.095 0.489 B_Naive1 L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 9.51e-01 0.00569 0.093 0.489 B_Naive1 L2
ENSG00000162434 JAK1 -826694 sc-eQTL 3.96e-01 -0.0611 0.0718 0.489 B_Naive1 L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 9.01e-01 -0.0123 0.0992 0.489 B_Naive1 L2
ENSG00000079739 PGM1 647649 sc-eQTL 2.19e-02 0.211 0.0912 0.489 B_Naive2 L2
ENSG00000088035 ALG6 873485 sc-eQTL 4.20e-01 0.0777 0.0962 0.489 B_Naive2 L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 4.08e-01 0.08 0.0965 0.489 B_Naive2 L2
ENSG00000162434 JAK1 -826694 sc-eQTL 2.74e-02 -0.165 0.0741 0.489 B_Naive2 L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 3.19e-01 -0.0959 0.096 0.489 B_Naive2 L2
ENSG00000079739 PGM1 647649 sc-eQTL 2.79e-01 0.104 0.0962 0.495 CD4_CTL L2
ENSG00000088035 ALG6 873485 sc-eQTL 8.20e-01 -0.0232 0.102 0.495 CD4_CTL L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 9.42e-01 -0.00724 0.0987 0.495 CD4_CTL L2
ENSG00000158966 CACHD1 -229069 sc-eQTL 6.32e-01 -0.0172 0.0358 0.495 CD4_CTL L2
ENSG00000162434 JAK1 -826694 sc-eQTL 5.26e-01 0.0562 0.0884 0.495 CD4_CTL L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 3.30e-01 -0.0914 0.0935 0.495 CD4_CTL L2
ENSG00000079739 PGM1 647649 sc-eQTL 2.50e-01 0.0876 0.0759 0.489 CD4_Naive L2
ENSG00000088035 ALG6 873485 sc-eQTL 1.73e-01 0.112 0.0823 0.489 CD4_Naive L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 4.67e-01 0.0639 0.0877 0.489 CD4_Naive L2
ENSG00000158966 CACHD1 -229069 sc-eQTL 1.22e-01 -0.0804 0.0517 0.489 CD4_Naive L2
ENSG00000162434 JAK1 -826694 sc-eQTL 2.54e-01 -0.0605 0.0529 0.489 CD4_Naive L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 7.68e-01 -0.0257 0.0872 0.489 CD4_Naive L2
ENSG00000079739 PGM1 647649 sc-eQTL 1.69e-01 0.109 0.0788 0.489 CD4_TCM L2
ENSG00000088035 ALG6 873485 sc-eQTL 8.25e-01 -0.0204 0.0919 0.489 CD4_TCM L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 5.17e-01 0.0606 0.0933 0.489 CD4_TCM L2
ENSG00000158966 CACHD1 -229069 sc-eQTL 1.99e-01 -0.095 0.0738 0.489 CD4_TCM L2
ENSG00000162434 JAK1 -826694 sc-eQTL 2.02e-01 -0.0773 0.0604 0.489 CD4_TCM L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 8.71e-01 0.0147 0.0904 0.489 CD4_TCM L2
ENSG00000079739 PGM1 647649 sc-eQTL 5.62e-01 -0.0543 0.0936 0.489 CD4_TEM L2
ENSG00000088035 ALG6 873485 sc-eQTL 5.54e-01 -0.0558 0.0941 0.489 CD4_TEM L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 1.88e-01 0.121 0.0917 0.489 CD4_TEM L2
ENSG00000158966 CACHD1 -229069 sc-eQTL 4.19e-01 -0.046 0.0568 0.489 CD4_TEM L2
ENSG00000162434 JAK1 -826694 sc-eQTL 1.41e-01 -0.119 0.0805 0.489 CD4_TEM L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 9.11e-01 0.0107 0.0954 0.489 CD4_TEM L2
ENSG00000079739 PGM1 647649 sc-eQTL 3.65e-02 0.178 0.0844 0.489 CD8_CTL L2
ENSG00000088035 ALG6 873485 sc-eQTL 2.05e-01 0.115 0.0904 0.489 CD8_CTL L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 9.39e-01 0.0073 0.0953 0.489 CD8_CTL L2
ENSG00000158966 CACHD1 -229069 sc-eQTL 2.91e-01 -0.0426 0.0403 0.489 CD8_CTL L2
ENSG00000162434 JAK1 -826694 sc-eQTL 8.99e-01 0.00955 0.0754 0.489 CD8_CTL L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 2.01e-01 -0.125 0.0972 0.489 CD8_CTL L2
ENSG00000079739 PGM1 647649 sc-eQTL 9.33e-02 0.146 0.0868 0.489 CD8_Naive L2
ENSG00000088035 ALG6 873485 sc-eQTL 9.81e-01 0.00215 0.0905 0.489 CD8_Naive L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 8.45e-01 -0.0178 0.0909 0.489 CD8_Naive L2
ENSG00000158966 CACHD1 -229069 sc-eQTL 6.59e-01 0.0278 0.063 0.489 CD8_Naive L2
ENSG00000162434 JAK1 -826694 sc-eQTL 3.24e-02 -0.161 0.075 0.489 CD8_Naive L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 5.26e-01 0.0544 0.0856 0.489 CD8_Naive L2
ENSG00000079739 PGM1 647649 sc-eQTL 4.39e-01 -0.0739 0.0952 0.491 CD8_TCM L2
ENSG00000088035 ALG6 873485 sc-eQTL 4.97e-01 0.0655 0.0964 0.491 CD8_TCM L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 9.36e-01 0.00747 0.0936 0.491 CD8_TCM L2
ENSG00000158966 CACHD1 -229069 sc-eQTL 8.69e-01 0.00813 0.0492 0.491 CD8_TCM L2
ENSG00000162434 JAK1 -826694 sc-eQTL 4.93e-01 -0.0542 0.079 0.491 CD8_TCM L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 3.34e-01 0.0922 0.0952 0.491 CD8_TCM L2
ENSG00000079739 PGM1 647649 sc-eQTL 9.70e-01 -0.00366 0.0971 0.498 CD8_TEM L2
ENSG00000088035 ALG6 873485 sc-eQTL 9.99e-01 0.000156 0.0974 0.498 CD8_TEM L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 7.46e-01 0.0319 0.0983 0.498 CD8_TEM L2
ENSG00000158966 CACHD1 -229069 sc-eQTL 4.40e-01 -0.0155 0.02 0.498 CD8_TEM L2
ENSG00000162434 JAK1 -826694 sc-eQTL 3.37e-01 -0.0908 0.0944 0.498 CD8_TEM L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 5.36e-01 0.059 0.0952 0.498 CD8_TEM L2
ENSG00000079739 PGM1 647649 sc-eQTL 4.24e-01 0.0727 0.0908 0.491 MAIT L2
ENSG00000088035 ALG6 873485 sc-eQTL 1.96e-01 0.116 0.0896 0.491 MAIT L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 9.44e-01 -0.00644 0.0911 0.491 MAIT L2
ENSG00000162434 JAK1 -826694 sc-eQTL 8.99e-01 0.0105 0.0822 0.491 MAIT L2
ENSG00000162437 RAVER2 -504035 sc-eQTL 1.79e-01 0.118 0.0872 0.491 MAIT L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 5.60e-01 0.0547 0.0937 0.491 MAIT L2
ENSG00000079739 PGM1 647649 sc-eQTL 7.60e-01 0.0287 0.0936 0.489 NK_CD56bright L2
ENSG00000088035 ALG6 873485 sc-eQTL 7.10e-01 0.0357 0.0959 0.489 NK_CD56bright L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 7.65e-01 0.029 0.0967 0.489 NK_CD56bright L2
ENSG00000162434 JAK1 -826694 sc-eQTL 7.14e-01 0.0224 0.061 0.489 NK_CD56bright L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 7.70e-01 0.028 0.0954 0.489 NK_CD56bright L2
ENSG00000079739 PGM1 647649 sc-eQTL 6.22e-02 0.138 0.0736 0.489 NK_CD56dim L2
ENSG00000088035 ALG6 873485 sc-eQTL 2.53e-01 -0.108 0.0939 0.489 NK_CD56dim L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 5.62e-01 0.0549 0.0946 0.489 NK_CD56dim L2
ENSG00000162434 JAK1 -826694 sc-eQTL 9.10e-01 -0.00566 0.05 0.489 NK_CD56dim L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 7.33e-01 -0.0349 0.102 0.489 NK_CD56dim L2
ENSG00000079739 PGM1 647649 sc-eQTL 2.70e-01 0.11 0.0994 0.486 NK_HLA L2
ENSG00000088035 ALG6 873485 sc-eQTL 2.14e-01 -0.128 0.103 0.486 NK_HLA L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 9.18e-01 0.01 0.0965 0.486 NK_HLA L2
ENSG00000162434 JAK1 -826694 sc-eQTL 1.55e-01 0.0916 0.0642 0.486 NK_HLA L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 1.84e-01 0.122 0.0915 0.486 NK_HLA L2
ENSG00000079739 PGM1 647649 sc-eQTL 6.70e-01 -0.0344 0.0805 0.489 NK_cytokine L2
ENSG00000088035 ALG6 873485 sc-eQTL 6.03e-01 0.0473 0.091 0.489 NK_cytokine L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 6.21e-01 -0.0443 0.0893 0.489 NK_cytokine L2
ENSG00000162434 JAK1 -826694 sc-eQTL 3.35e-01 -0.0512 0.0531 0.489 NK_cytokine L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 4.51e-01 0.0718 0.0951 0.489 NK_cytokine L2
ENSG00000079739 PGM1 647649 sc-eQTL 6.89e-01 -0.0434 0.108 0.467 PB L2
ENSG00000088035 ALG6 873485 sc-eQTL 3.08e-01 -0.116 0.113 0.467 PB L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 4.27e-01 -0.0841 0.105 0.467 PB L2
ENSG00000162434 JAK1 -826694 sc-eQTL 4.22e-01 -0.064 0.0795 0.467 PB L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 3.33e-01 0.112 0.116 0.467 PB L2
ENSG00000079739 PGM1 647649 sc-eQTL 9.89e-01 -0.00122 0.0869 0.491 Pro_T L2
ENSG00000088035 ALG6 873485 sc-eQTL 2.80e-01 0.0955 0.0881 0.491 Pro_T L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 1.79e-02 -0.183 0.0768 0.491 Pro_T L2
ENSG00000162434 JAK1 -826694 sc-eQTL 9.53e-01 0.00362 0.0614 0.491 Pro_T L2
ENSG00000162437 RAVER2 -504035 sc-eQTL 4.97e-01 0.055 0.0809 0.491 Pro_T L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 1.86e-02 0.212 0.0893 0.491 Pro_T L2
ENSG00000079739 PGM1 647649 sc-eQTL 6.44e-01 -0.0413 0.0893 0.489 Treg L2
ENSG00000088035 ALG6 873485 sc-eQTL 3.52e-01 -0.089 0.0954 0.489 Treg L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 2.50e-01 0.108 0.0935 0.489 Treg L2
ENSG00000158966 CACHD1 -229069 sc-eQTL 1.03e-01 -0.115 0.0704 0.489 Treg L2
ENSG00000162434 JAK1 -826694 sc-eQTL 3.36e-02 -0.16 0.0747 0.489 Treg L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 5.63e-01 -0.0519 0.0897 0.489 Treg L2
ENSG00000079739 PGM1 647649 sc-eQTL 1.27e-01 0.138 0.0899 0.495 cDC L2
ENSG00000088035 ALG6 873485 sc-eQTL 2.46e-01 -0.106 0.0914 0.495 cDC L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 5.61e-02 0.189 0.0981 0.495 cDC L2
ENSG00000162433 AK4 -906489 sc-eQTL 6.08e-04 0.28 0.0802 0.495 cDC L2
ENSG00000162434 JAK1 -826694 sc-eQTL 3.97e-01 0.0655 0.0771 0.495 cDC L2
ENSG00000162437 RAVER2 -504035 sc-eQTL 5.15e-01 -0.0553 0.0848 0.495 cDC L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 8.55e-01 0.0146 0.0796 0.495 cDC L2
ENSG00000079739 PGM1 647649 sc-eQTL 1.87e-01 0.111 0.0842 0.489 cMono_IL1B L2
ENSG00000088035 ALG6 873485 sc-eQTL 9.22e-01 0.00835 0.0847 0.489 cMono_IL1B L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 7.44e-01 -0.0291 0.0889 0.489 cMono_IL1B L2
ENSG00000162433 AK4 -906489 sc-eQTL 6.11e-01 0.0426 0.0836 0.489 cMono_IL1B L2
ENSG00000162434 JAK1 -826694 sc-eQTL 8.84e-01 0.0111 0.076 0.489 cMono_IL1B L2
ENSG00000079739 PGM1 647649 sc-eQTL 8.33e-01 0.0197 0.0936 0.489 cMono_S100A L2
ENSG00000088035 ALG6 873485 sc-eQTL 1.60e-01 -0.133 0.0944 0.489 cMono_S100A L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 9.72e-01 0.00306 0.0859 0.489 cMono_S100A L2
ENSG00000162433 AK4 -906489 sc-eQTL 9.17e-01 -0.00882 0.0848 0.489 cMono_S100A L2
ENSG00000162434 JAK1 -826694 sc-eQTL 2.02e-01 -0.0997 0.078 0.489 cMono_S100A L2
ENSG00000079739 PGM1 647649 sc-eQTL 4.96e-01 0.073 0.107 0.482 gdT L2
ENSG00000088035 ALG6 873485 sc-eQTL 9.24e-01 -0.011 0.114 0.482 gdT L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 1.89e-01 0.149 0.113 0.482 gdT L2
ENSG00000162434 JAK1 -826694 sc-eQTL 7.63e-01 -0.0345 0.114 0.482 gdT L2
ENSG00000162437 RAVER2 -504035 sc-eQTL 1.81e-02 -0.236 0.0986 0.482 gdT L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 3.40e-01 0.107 0.112 0.482 gdT L2
ENSG00000079739 PGM1 647649 sc-eQTL 8.07e-01 0.0229 0.0934 0.493 intMono L2
ENSG00000088035 ALG6 873485 sc-eQTL 3.80e-01 0.0765 0.0869 0.493 intMono L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 7.35e-01 0.0317 0.0935 0.493 intMono L2
ENSG00000162433 AK4 -906489 sc-eQTL 7.71e-01 -0.024 0.0825 0.493 intMono L2
ENSG00000162434 JAK1 -826694 sc-eQTL 5.05e-01 -0.0509 0.0762 0.493 intMono L2
ENSG00000079739 PGM1 647649 sc-eQTL 4.96e-01 0.0589 0.0864 0.491 ncMono L2
ENSG00000088035 ALG6 873485 sc-eQTL 2.32e-01 0.114 0.0947 0.491 ncMono L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 2.01e-01 -0.117 0.0911 0.491 ncMono L2
ENSG00000162433 AK4 -906489 sc-eQTL 8.36e-03 0.209 0.0784 0.491 ncMono L2
ENSG00000162434 JAK1 -826694 sc-eQTL 1.71e-01 -0.0882 0.0642 0.491 ncMono L2
ENSG00000079739 PGM1 647649 sc-eQTL 9.11e-01 -0.0115 0.102 0.494 pDC L2
ENSG00000088035 ALG6 873485 sc-eQTL 5.21e-01 -0.0639 0.0994 0.494 pDC L2
ENSG00000142856 ITGB3BP 647339 sc-eQTL 2.57e-01 -0.116 0.102 0.494 pDC L2
ENSG00000162433 AK4 -906489 sc-eQTL 6.18e-01 -0.0308 0.0617 0.494 pDC L2
ENSG00000162434 JAK1 -826694 sc-eQTL 9.96e-01 -0.000431 0.0824 0.494 pDC L2
ENSG00000162437 RAVER2 -504035 sc-eQTL 9.92e-01 -0.000935 0.0929 0.494 pDC L2
ENSG00000203965 EFCAB7 717688 sc-eQTL 7.10e-01 -0.0337 0.0905 0.494 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 647649 sc-eQTL 3.14e-01 0.088 0.0872 0.489 B_Memory LOneK1K
ENSG00000088035 ALG6 873485 sc-eQTL 7.79e-01 -0.0272 0.0966 0.489 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 647339 sc-eQTL 8.27e-01 0.0195 0.0891 0.489 B_Memory LOneK1K
ENSG00000162434 JAK1 -826694 sc-eQTL 2.83e-01 0.0755 0.0701 0.489 B_Memory LOneK1K
ENSG00000203965 EFCAB7 717688 sc-eQTL 3.53e-01 0.0861 0.0926 0.489 B_Memory LOneK1K
ENSG00000079739 PGM1 647649 sc-eQTL 5.76e-03 0.253 0.0906 0.489 B_Naive LOneK1K
ENSG00000088035 ALG6 873485 sc-eQTL 5.46e-01 0.0574 0.0949 0.489 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 647339 sc-eQTL 7.55e-01 0.0299 0.0957 0.489 B_Naive LOneK1K
ENSG00000162434 JAK1 -826694 sc-eQTL 6.54e-02 -0.128 0.0689 0.489 B_Naive LOneK1K
ENSG00000203965 EFCAB7 717688 sc-eQTL 4.41e-01 -0.0742 0.096 0.489 B_Naive LOneK1K
ENSG00000079739 PGM1 647649 sc-eQTL 3.85e-01 0.075 0.0862 0.489 CD14_Mono LOneK1K
ENSG00000088035 ALG6 873485 sc-eQTL 5.65e-01 -0.0481 0.0836 0.489 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 647339 sc-eQTL 7.03e-01 -0.0329 0.0861 0.489 CD14_Mono LOneK1K
ENSG00000162433 AK4 -906489 sc-eQTL 7.70e-01 0.0249 0.0851 0.489 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -826694 sc-eQTL 7.69e-01 -0.0209 0.0712 0.489 CD14_Mono LOneK1K
ENSG00000079739 PGM1 647649 sc-eQTL 7.96e-01 0.0214 0.0827 0.491 CD16_Mono LOneK1K
ENSG00000088035 ALG6 873485 sc-eQTL 1.69e-01 0.129 0.0936 0.491 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 647339 sc-eQTL 1.74e-01 -0.125 0.0916 0.491 CD16_Mono LOneK1K
ENSG00000162433 AK4 -906489 sc-eQTL 4.24e-01 0.0652 0.0814 0.491 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -826694 sc-eQTL 2.54e-01 -0.0626 0.0547 0.491 CD16_Mono LOneK1K
ENSG00000079739 PGM1 647649 sc-eQTL 1.40e-01 0.106 0.0715 0.489 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 873485 sc-eQTL 3.17e-01 -0.0864 0.0861 0.489 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 647339 sc-eQTL 7.78e-01 0.0258 0.0914 0.489 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -826694 sc-eQTL 6.57e-01 -0.0193 0.0434 0.489 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 717688 sc-eQTL 9.47e-01 -0.00677 0.101 0.489 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000185483 ROR1 467043 pQTL 0.0157 0.0316 0.0131 0.0 0.0 0.473

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 \N 647649 3.21e-07 1.56e-07 6.15e-08 2.2e-07 9.82e-08 8.37e-08 2.16e-07 5.82e-08 1.71e-07 9.35e-08 1.66e-07 1.31e-07 2.29e-07 8e-08 5.36e-08 9.01e-08 4.45e-08 1.8e-07 7.16e-08 5.35e-08 1.22e-07 1.56e-07 1.64e-07 3.51e-08 2.09e-07 1.31e-07 1.2e-07 1.12e-07 1.32e-07 1.17e-07 1.26e-07 3.66e-08 3.29e-08 9.58e-08 3.57e-08 2.79e-08 4.49e-08 8.89e-08 6.5e-08 5.45e-08 6.07e-08 1.55e-07 4.83e-08 1.3e-08 3.55e-08 1.71e-08 8.74e-08 1.92e-09 4.82e-08
ENSG00000233877 \N -700919 3.07e-07 1.42e-07 5.82e-08 2.05e-07 9.8e-08 8.21e-08 1.9e-07 5.62e-08 1.44e-07 6.75e-08 1.62e-07 1.22e-07 1.95e-07 7.95e-08 5.94e-08 7.89e-08 4.45e-08 1.64e-07 7.12e-08 4.95e-08 1.25e-07 1.39e-07 1.58e-07 3.07e-08 1.85e-07 1.26e-07 1.17e-07 1.04e-07 1.31e-07 1.07e-07 1.09e-07 3.59e-08 3.59e-08 9.52e-08 2.97e-08 2.95e-08 5.74e-08 8.63e-08 6.42e-08 4.08e-08 5.48e-08 1.5e-07 5.22e-08 1.11e-08 2.82e-08 1.77e-08 1.11e-07 1.89e-09 4.8e-08