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Genes within 1Mb (chr1:64202883:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 609472 sc-eQTL 2.35e-01 -0.0985 0.0827 0.462 B L1
ENSG00000088035 ALG6 835308 sc-eQTL 9.23e-01 -0.00829 0.086 0.462 B L1
ENSG00000142856 ITGB3BP 609162 sc-eQTL 7.23e-01 0.0337 0.0951 0.462 B L1
ENSG00000162434 JAK1 -864871 sc-eQTL 8.53e-01 0.0109 0.0585 0.462 B L1
ENSG00000203965 EFCAB7 679511 sc-eQTL 6.85e-01 -0.0396 0.0974 0.462 B L1
ENSG00000079739 PGM1 609472 sc-eQTL 6.87e-01 0.0287 0.071 0.462 CD4T L1
ENSG00000088035 ALG6 835308 sc-eQTL 3.87e-02 0.161 0.0776 0.462 CD4T L1
ENSG00000142856 ITGB3BP 609162 sc-eQTL 4.95e-01 -0.0621 0.0909 0.462 CD4T L1
ENSG00000158966 CACHD1 -267246 sc-eQTL 1.87e-01 0.0716 0.0541 0.462 CD4T L1
ENSG00000162434 JAK1 -864871 sc-eQTL 3.23e-01 0.0562 0.0568 0.462 CD4T L1
ENSG00000203965 EFCAB7 679511 sc-eQTL 3.34e-01 0.079 0.0815 0.462 CD4T L1
ENSG00000079739 PGM1 609472 sc-eQTL 1.95e-01 -0.101 0.078 0.462 CD8T L1
ENSG00000088035 ALG6 835308 sc-eQTL 5.64e-01 0.0498 0.0862 0.462 CD8T L1
ENSG00000142856 ITGB3BP 609162 sc-eQTL 8.72e-01 0.0149 0.0929 0.462 CD8T L1
ENSG00000158966 CACHD1 -267246 sc-eQTL 4.00e-01 0.0396 0.0469 0.462 CD8T L1
ENSG00000162434 JAK1 -864871 sc-eQTL 7.71e-01 -0.0216 0.074 0.462 CD8T L1
ENSG00000203965 EFCAB7 679511 sc-eQTL 9.78e-01 -0.00252 0.0926 0.462 CD8T L1
ENSG00000079739 PGM1 609472 sc-eQTL 4.54e-01 -0.0646 0.0861 0.459 DC L1
ENSG00000088035 ALG6 835308 sc-eQTL 5.16e-01 0.0579 0.0889 0.459 DC L1
ENSG00000142856 ITGB3BP 609162 sc-eQTL 1.31e-01 -0.151 0.0992 0.459 DC L1
ENSG00000162433 AK4 -944666 sc-eQTL 3.97e-01 0.067 0.0789 0.459 DC L1
ENSG00000162434 JAK1 -864871 sc-eQTL 5.66e-02 -0.125 0.0652 0.459 DC L1
ENSG00000162437 RAVER2 -542212 sc-eQTL 1.18e-01 0.131 0.0837 0.459 DC L1
ENSG00000203965 EFCAB7 679511 sc-eQTL 3.10e-01 -0.0883 0.0866 0.459 DC L1
ENSG00000079739 PGM1 609472 sc-eQTL 8.67e-01 0.0142 0.0847 0.462 Mono L1
ENSG00000088035 ALG6 835308 sc-eQTL 9.26e-01 -0.00821 0.0883 0.462 Mono L1
ENSG00000142856 ITGB3BP 609162 sc-eQTL 5.61e-01 0.0531 0.0912 0.462 Mono L1
ENSG00000162433 AK4 -944666 sc-eQTL 9.15e-01 -0.00925 0.0861 0.462 Mono L1
ENSG00000162434 JAK1 -864871 sc-eQTL 6.92e-01 0.0244 0.0614 0.462 Mono L1
ENSG00000079739 PGM1 609472 sc-eQTL 3.24e-01 -0.0713 0.0722 0.461 NK L1
ENSG00000088035 ALG6 835308 sc-eQTL 2.83e-02 0.185 0.0839 0.461 NK L1
ENSG00000142856 ITGB3BP 609162 sc-eQTL 4.81e-01 -0.0657 0.0932 0.461 NK L1
ENSG00000162434 JAK1 -864871 sc-eQTL 1.52e-01 -0.0621 0.0432 0.461 NK L1
ENSG00000203965 EFCAB7 679511 sc-eQTL 8.02e-01 -0.0255 0.101 0.461 NK L1
ENSG00000079739 PGM1 609472 sc-eQTL 7.25e-01 -0.0286 0.0813 0.462 Other_T L1
ENSG00000088035 ALG6 835308 sc-eQTL 3.59e-01 -0.075 0.0816 0.462 Other_T L1
ENSG00000142856 ITGB3BP 609162 sc-eQTL 1.66e-01 0.0886 0.0638 0.462 Other_T L1
ENSG00000162434 JAK1 -864871 sc-eQTL 8.02e-01 0.0155 0.062 0.462 Other_T L1
ENSG00000162437 RAVER2 -542212 sc-eQTL 2.36e-01 -0.107 0.0899 0.462 Other_T L1
ENSG00000203965 EFCAB7 679511 sc-eQTL 1.01e-01 -0.162 0.0982 0.462 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 609472 sc-eQTL 9.32e-03 -0.284 0.108 0.452 B_Activated L2
ENSG00000088035 ALG6 835308 sc-eQTL 7.27e-01 -0.0368 0.105 0.452 B_Activated L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 3.81e-01 0.0883 0.101 0.452 B_Activated L2
ENSG00000162434 JAK1 -864871 sc-eQTL 9.96e-01 -0.000455 0.101 0.452 B_Activated L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 1.56e-01 -0.135 0.0949 0.452 B_Activated L2
ENSG00000079739 PGM1 609472 sc-eQTL 2.81e-01 0.106 0.0983 0.461 B_Intermediate L2
ENSG00000088035 ALG6 835308 sc-eQTL 7.96e-01 0.026 0.1 0.461 B_Intermediate L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 4.18e-01 -0.0781 0.0963 0.461 B_Intermediate L2
ENSG00000162434 JAK1 -864871 sc-eQTL 8.86e-01 0.012 0.0832 0.461 B_Intermediate L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 8.31e-01 0.0204 0.0955 0.461 B_Intermediate L2
ENSG00000079739 PGM1 609472 sc-eQTL 1.65e-01 -0.133 0.0956 0.463 B_Memory L2
ENSG00000088035 ALG6 835308 sc-eQTL 7.79e-01 0.0274 0.0976 0.463 B_Memory L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 7.00e-01 -0.0385 0.0995 0.463 B_Memory L2
ENSG00000162434 JAK1 -864871 sc-eQTL 3.72e-01 -0.0738 0.0826 0.463 B_Memory L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 8.36e-01 -0.0204 0.0988 0.463 B_Memory L2
ENSG00000079739 PGM1 609472 sc-eQTL 2.08e-01 -0.124 0.0981 0.462 B_Naive1 L2
ENSG00000088035 ALG6 835308 sc-eQTL 7.03e-01 -0.0378 0.0988 0.462 B_Naive1 L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 4.03e-01 0.081 0.0966 0.462 B_Naive1 L2
ENSG00000162434 JAK1 -864871 sc-eQTL 1.80e-01 0.1 0.0745 0.462 B_Naive1 L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 5.44e-01 0.0627 0.103 0.462 B_Naive1 L2
ENSG00000079739 PGM1 609472 sc-eQTL 3.85e-01 -0.0833 0.0957 0.464 B_Naive2 L2
ENSG00000088035 ALG6 835308 sc-eQTL 1.94e-01 -0.13 0.0996 0.464 B_Naive2 L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 5.07e-01 -0.0667 0.1 0.464 B_Naive2 L2
ENSG00000162434 JAK1 -864871 sc-eQTL 1.03e-02 0.198 0.0766 0.464 B_Naive2 L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 9.48e-01 0.00657 0.0999 0.464 B_Naive2 L2
ENSG00000079739 PGM1 609472 sc-eQTL 6.24e-01 0.0475 0.0968 0.457 CD4_CTL L2
ENSG00000088035 ALG6 835308 sc-eQTL 7.24e-02 0.184 0.102 0.457 CD4_CTL L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 7.56e-01 0.0309 0.0991 0.457 CD4_CTL L2
ENSG00000158966 CACHD1 -267246 sc-eQTL 5.41e-01 -0.0221 0.036 0.457 CD4_CTL L2
ENSG00000162434 JAK1 -864871 sc-eQTL 6.78e-01 -0.0369 0.0888 0.457 CD4_CTL L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 3.43e-01 0.0893 0.0939 0.457 CD4_CTL L2
ENSG00000079739 PGM1 609472 sc-eQTL 9.86e-01 0.00143 0.0799 0.462 CD4_Naive L2
ENSG00000088035 ALG6 835308 sc-eQTL 4.34e-01 0.068 0.0867 0.462 CD4_Naive L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 9.98e-01 -0.000235 0.0922 0.462 CD4_Naive L2
ENSG00000158966 CACHD1 -267246 sc-eQTL 1.39e-01 0.0806 0.0543 0.462 CD4_Naive L2
ENSG00000162434 JAK1 -864871 sc-eQTL 9.70e-01 0.00207 0.0557 0.462 CD4_Naive L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 7.38e-02 0.163 0.0909 0.462 CD4_Naive L2
ENSG00000079739 PGM1 609472 sc-eQTL 3.57e-01 0.0763 0.0827 0.462 CD4_TCM L2
ENSG00000088035 ALG6 835308 sc-eQTL 2.27e-01 0.116 0.0959 0.462 CD4_TCM L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 2.00e-01 -0.125 0.0975 0.462 CD4_TCM L2
ENSG00000158966 CACHD1 -267246 sc-eQTL 2.19e-01 0.0952 0.0772 0.462 CD4_TCM L2
ENSG00000162434 JAK1 -864871 sc-eQTL 4.20e-01 0.0512 0.0633 0.462 CD4_TCM L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 3.78e-02 -0.196 0.0937 0.462 CD4_TCM L2
ENSG00000079739 PGM1 609472 sc-eQTL 9.22e-01 -0.00953 0.0971 0.462 CD4_TEM L2
ENSG00000088035 ALG6 835308 sc-eQTL 3.07e-03 0.286 0.0956 0.462 CD4_TEM L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 2.20e-01 -0.117 0.0951 0.462 CD4_TEM L2
ENSG00000158966 CACHD1 -267246 sc-eQTL 9.09e-01 -0.00674 0.059 0.462 CD4_TEM L2
ENSG00000162434 JAK1 -864871 sc-eQTL 1.87e-01 0.11 0.0836 0.462 CD4_TEM L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 1.10e-01 0.158 0.0983 0.462 CD4_TEM L2
ENSG00000079739 PGM1 609472 sc-eQTL 4.53e-01 -0.0663 0.0881 0.462 CD8_CTL L2
ENSG00000088035 ALG6 835308 sc-eQTL 9.04e-01 0.0113 0.0938 0.462 CD8_CTL L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 8.38e-01 -0.0202 0.0985 0.462 CD8_CTL L2
ENSG00000158966 CACHD1 -267246 sc-eQTL 4.78e-01 0.0297 0.0417 0.462 CD8_CTL L2
ENSG00000162434 JAK1 -864871 sc-eQTL 7.95e-01 -0.0203 0.078 0.462 CD8_CTL L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 7.72e-01 0.0293 0.101 0.462 CD8_CTL L2
ENSG00000079739 PGM1 609472 sc-eQTL 1.17e-01 -0.141 0.0893 0.462 CD8_Naive L2
ENSG00000088035 ALG6 835308 sc-eQTL 7.25e-01 0.0328 0.093 0.462 CD8_Naive L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 9.49e-01 -0.00595 0.0935 0.462 CD8_Naive L2
ENSG00000158966 CACHD1 -267246 sc-eQTL 4.68e-01 0.0471 0.0647 0.462 CD8_Naive L2
ENSG00000162434 JAK1 -864871 sc-eQTL 7.40e-01 -0.0259 0.0779 0.462 CD8_Naive L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 9.79e-01 0.00235 0.0881 0.462 CD8_Naive L2
ENSG00000079739 PGM1 609472 sc-eQTL 4.03e-01 0.0806 0.0963 0.463 CD8_TCM L2
ENSG00000088035 ALG6 835308 sc-eQTL 8.97e-01 0.0126 0.0976 0.463 CD8_TCM L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 8.70e-01 -0.0155 0.0947 0.463 CD8_TCM L2
ENSG00000158966 CACHD1 -267246 sc-eQTL 3.46e-02 0.105 0.0492 0.463 CD8_TCM L2
ENSG00000162434 JAK1 -864871 sc-eQTL 3.19e-01 0.0797 0.0798 0.463 CD8_TCM L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 6.45e-01 0.0445 0.0965 0.463 CD8_TCM L2
ENSG00000079739 PGM1 609472 sc-eQTL 5.42e-01 0.0632 0.103 0.457 CD8_TEM L2
ENSG00000088035 ALG6 835308 sc-eQTL 9.19e-01 0.0106 0.104 0.457 CD8_TEM L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 2.42e-02 -0.235 0.103 0.457 CD8_TEM L2
ENSG00000158966 CACHD1 -267246 sc-eQTL 4.92e-01 0.0147 0.0213 0.457 CD8_TEM L2
ENSG00000162434 JAK1 -864871 sc-eQTL 2.62e-01 0.113 0.101 0.457 CD8_TEM L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 2.19e-01 -0.125 0.101 0.457 CD8_TEM L2
ENSG00000079739 PGM1 609472 sc-eQTL 5.83e-01 -0.0518 0.0942 0.461 MAIT L2
ENSG00000088035 ALG6 835308 sc-eQTL 9.85e-01 0.00175 0.0933 0.461 MAIT L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 3.79e-01 0.0831 0.0942 0.461 MAIT L2
ENSG00000162434 JAK1 -864871 sc-eQTL 7.46e-01 0.0276 0.0852 0.461 MAIT L2
ENSG00000162437 RAVER2 -542212 sc-eQTL 7.17e-01 -0.033 0.0908 0.461 MAIT L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 9.79e-01 -0.00257 0.0972 0.461 MAIT L2
ENSG00000079739 PGM1 609472 sc-eQTL 6.25e-01 0.0468 0.0955 0.46 NK_CD56bright L2
ENSG00000088035 ALG6 835308 sc-eQTL 7.90e-01 -0.0262 0.098 0.46 NK_CD56bright L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 9.53e-02 -0.164 0.0981 0.46 NK_CD56bright L2
ENSG00000162434 JAK1 -864871 sc-eQTL 5.00e-01 -0.042 0.0622 0.46 NK_CD56bright L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 4.88e-01 -0.0677 0.0973 0.46 NK_CD56bright L2
ENSG00000079739 PGM1 609472 sc-eQTL 6.50e-01 -0.0346 0.0761 0.461 NK_CD56dim L2
ENSG00000088035 ALG6 835308 sc-eQTL 2.13e-02 0.221 0.0954 0.461 NK_CD56dim L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 5.17e-01 -0.0629 0.0971 0.461 NK_CD56dim L2
ENSG00000162434 JAK1 -864871 sc-eQTL 4.82e-01 -0.0361 0.0512 0.461 NK_CD56dim L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 6.56e-01 0.0468 0.105 0.461 NK_CD56dim L2
ENSG00000079739 PGM1 609472 sc-eQTL 6.16e-02 -0.191 0.102 0.463 NK_HLA L2
ENSG00000088035 ALG6 835308 sc-eQTL 1.64e-01 0.148 0.106 0.463 NK_HLA L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 7.96e-01 -0.0257 0.0992 0.463 NK_HLA L2
ENSG00000162434 JAK1 -864871 sc-eQTL 7.45e-01 0.0216 0.0663 0.463 NK_HLA L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 4.87e-02 -0.185 0.0935 0.463 NK_HLA L2
ENSG00000079739 PGM1 609472 sc-eQTL 8.96e-01 0.0107 0.0819 0.461 NK_cytokine L2
ENSG00000088035 ALG6 835308 sc-eQTL 6.36e-01 0.0438 0.0925 0.461 NK_cytokine L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 6.12e-01 0.0462 0.0908 0.461 NK_cytokine L2
ENSG00000162434 JAK1 -864871 sc-eQTL 5.68e-01 -0.0309 0.054 0.461 NK_cytokine L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 9.45e-01 -0.00674 0.0968 0.461 NK_cytokine L2
ENSG00000079739 PGM1 609472 sc-eQTL 8.89e-01 0.017 0.122 0.452 PB L2
ENSG00000088035 ALG6 835308 sc-eQTL 2.97e-01 0.134 0.127 0.452 PB L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 6.53e-01 0.0536 0.119 0.452 PB L2
ENSG00000162434 JAK1 -864871 sc-eQTL 3.32e-01 0.0873 0.0895 0.452 PB L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 4.30e-01 -0.103 0.13 0.452 PB L2
ENSG00000079739 PGM1 609472 sc-eQTL 9.07e-01 -0.0105 0.0896 0.461 Pro_T L2
ENSG00000088035 ALG6 835308 sc-eQTL 5.17e-01 -0.0592 0.0911 0.461 Pro_T L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 3.09e-01 0.0816 0.0801 0.461 Pro_T L2
ENSG00000162434 JAK1 -864871 sc-eQTL 6.21e-01 0.0313 0.0633 0.461 Pro_T L2
ENSG00000162437 RAVER2 -542212 sc-eQTL 4.68e-01 -0.0607 0.0835 0.461 Pro_T L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 3.58e-01 -0.0857 0.0931 0.461 Pro_T L2
ENSG00000079739 PGM1 609472 sc-eQTL 3.84e-01 0.0818 0.0938 0.462 Treg L2
ENSG00000088035 ALG6 835308 sc-eQTL 2.22e-01 0.123 0.1 0.462 Treg L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 7.18e-01 -0.0357 0.0985 0.462 Treg L2
ENSG00000158966 CACHD1 -267246 sc-eQTL 1.40e-01 0.11 0.0741 0.462 Treg L2
ENSG00000162434 JAK1 -864871 sc-eQTL 8.86e-02 0.135 0.0788 0.462 Treg L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 8.82e-01 -0.014 0.0943 0.462 Treg L2
ENSG00000079739 PGM1 609472 sc-eQTL 8.16e-01 -0.0214 0.092 0.456 cDC L2
ENSG00000088035 ALG6 835308 sc-eQTL 4.68e-01 0.0678 0.0932 0.456 cDC L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 1.07e-02 -0.255 0.099 0.456 cDC L2
ENSG00000162433 AK4 -944666 sc-eQTL 6.02e-01 0.0439 0.0841 0.456 cDC L2
ENSG00000162434 JAK1 -864871 sc-eQTL 1.23e-01 -0.121 0.078 0.456 cDC L2
ENSG00000162437 RAVER2 -542212 sc-eQTL 1.57e-01 0.122 0.0858 0.456 cDC L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 9.11e-01 -0.00911 0.081 0.456 cDC L2
ENSG00000079739 PGM1 609472 sc-eQTL 7.96e-01 -0.023 0.0889 0.462 cMono_IL1B L2
ENSG00000088035 ALG6 835308 sc-eQTL 4.33e-01 -0.0698 0.0888 0.462 cMono_IL1B L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 4.45e-01 0.0714 0.0933 0.462 cMono_IL1B L2
ENSG00000162433 AK4 -944666 sc-eQTL 9.70e-01 0.00331 0.0879 0.462 cMono_IL1B L2
ENSG00000162434 JAK1 -864871 sc-eQTL 7.96e-01 -0.0207 0.0799 0.462 cMono_IL1B L2
ENSG00000079739 PGM1 609472 sc-eQTL 8.29e-01 0.0211 0.0975 0.462 cMono_S100A L2
ENSG00000088035 ALG6 835308 sc-eQTL 4.14e-01 0.0807 0.0986 0.462 cMono_S100A L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 7.62e-01 0.0272 0.0894 0.462 cMono_S100A L2
ENSG00000162433 AK4 -944666 sc-eQTL 5.91e-01 0.0475 0.0883 0.462 cMono_S100A L2
ENSG00000162434 JAK1 -864871 sc-eQTL 3.68e-01 0.0735 0.0814 0.462 cMono_S100A L2
ENSG00000079739 PGM1 609472 sc-eQTL 2.54e-01 -0.122 0.107 0.455 gdT L2
ENSG00000088035 ALG6 835308 sc-eQTL 3.75e-01 -0.101 0.114 0.455 gdT L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 7.50e-01 -0.0363 0.113 0.455 gdT L2
ENSG00000162434 JAK1 -864871 sc-eQTL 3.61e-01 -0.104 0.114 0.455 gdT L2
ENSG00000162437 RAVER2 -542212 sc-eQTL 1.49e-01 0.144 0.0997 0.455 gdT L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 5.45e-01 -0.0677 0.112 0.455 gdT L2
ENSG00000079739 PGM1 609472 sc-eQTL 4.83e-01 -0.0688 0.0979 0.453 intMono L2
ENSG00000088035 ALG6 835308 sc-eQTL 8.55e-01 -0.0168 0.0913 0.453 intMono L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 1.52e-01 -0.14 0.0976 0.453 intMono L2
ENSG00000162433 AK4 -944666 sc-eQTL 7.83e-01 0.0238 0.0865 0.453 intMono L2
ENSG00000162434 JAK1 -864871 sc-eQTL 8.85e-01 -0.0116 0.08 0.453 intMono L2
ENSG00000079739 PGM1 609472 sc-eQTL 6.54e-01 -0.0396 0.0882 0.457 ncMono L2
ENSG00000088035 ALG6 835308 sc-eQTL 2.41e-01 -0.114 0.0967 0.457 ncMono L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 3.18e-01 0.0931 0.093 0.457 ncMono L2
ENSG00000162433 AK4 -944666 sc-eQTL 3.09e-01 -0.0828 0.0811 0.457 ncMono L2
ENSG00000162434 JAK1 -864871 sc-eQTL 2.87e-01 0.07 0.0656 0.457 ncMono L2
ENSG00000079739 PGM1 609472 sc-eQTL 8.00e-01 -0.027 0.106 0.458 pDC L2
ENSG00000088035 ALG6 835308 sc-eQTL 9.52e-01 -0.00627 0.104 0.458 pDC L2
ENSG00000142856 ITGB3BP 609162 sc-eQTL 8.65e-01 0.0181 0.107 0.458 pDC L2
ENSG00000162433 AK4 -944666 sc-eQTL 7.11e-01 0.0238 0.0643 0.458 pDC L2
ENSG00000162434 JAK1 -864871 sc-eQTL 9.29e-01 0.0077 0.0859 0.458 pDC L2
ENSG00000162437 RAVER2 -542212 sc-eQTL 7.01e-01 0.0372 0.0967 0.458 pDC L2
ENSG00000203965 EFCAB7 679511 sc-eQTL 8.01e-01 0.0238 0.0944 0.458 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 609472 sc-eQTL 3.07e-01 -0.0933 0.0912 0.462 B_Memory LOneK1K
ENSG00000088035 ALG6 835308 sc-eQTL 5.58e-01 0.0593 0.101 0.462 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 609162 sc-eQTL 5.51e-01 -0.0556 0.0931 0.462 B_Memory LOneK1K
ENSG00000162434 JAK1 -864871 sc-eQTL 4.86e-01 -0.0513 0.0735 0.462 B_Memory LOneK1K
ENSG00000203965 EFCAB7 679511 sc-eQTL 9.39e-01 0.00746 0.0971 0.462 B_Memory LOneK1K
ENSG00000079739 PGM1 609472 sc-eQTL 1.80e-01 -0.129 0.0957 0.462 B_Naive LOneK1K
ENSG00000088035 ALG6 835308 sc-eQTL 2.08e-01 -0.125 0.0986 0.462 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 609162 sc-eQTL 6.43e-01 0.0463 0.0997 0.462 B_Naive LOneK1K
ENSG00000162434 JAK1 -864871 sc-eQTL 3.14e-02 0.155 0.0716 0.462 B_Naive LOneK1K
ENSG00000203965 EFCAB7 679511 sc-eQTL 6.32e-01 0.0481 0.1 0.462 B_Naive LOneK1K
ENSG00000079739 PGM1 609472 sc-eQTL 7.37e-01 0.0305 0.0906 0.462 CD14_Mono LOneK1K
ENSG00000088035 ALG6 835308 sc-eQTL 6.67e-01 -0.0378 0.0877 0.462 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 609162 sc-eQTL 4.95e-01 0.0617 0.0902 0.462 CD14_Mono LOneK1K
ENSG00000162433 AK4 -944666 sc-eQTL 7.98e-01 -0.0229 0.0892 0.462 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -864871 sc-eQTL 9.01e-01 0.00926 0.0747 0.462 CD14_Mono LOneK1K
ENSG00000079739 PGM1 609472 sc-eQTL 2.62e-01 -0.0957 0.0851 0.461 CD16_Mono LOneK1K
ENSG00000088035 ALG6 835308 sc-eQTL 2.81e-01 -0.104 0.0967 0.461 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 609162 sc-eQTL 6.81e-01 0.039 0.0949 0.461 CD16_Mono LOneK1K
ENSG00000162433 AK4 -944666 sc-eQTL 8.01e-01 -0.0213 0.0841 0.461 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -864871 sc-eQTL 4.18e-01 0.0458 0.0565 0.461 CD16_Mono LOneK1K
ENSG00000079739 PGM1 609472 sc-eQTL 2.82e-01 -0.0794 0.0736 0.461 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 835308 sc-eQTL 1.56e-02 0.213 0.0874 0.461 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 609162 sc-eQTL 7.77e-01 -0.0266 0.0939 0.461 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -864871 sc-eQTL 3.21e-01 -0.0442 0.0445 0.461 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 679511 sc-eQTL 9.31e-01 0.00899 0.104 0.461 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000185483 ROR1 428866 pQTL 5.71e-12 -0.091 0.0131 0.00935 0.00416 0.467

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000233877 \N -739096 2.95e-07 1.59e-07 5.91e-08 2.41e-07 1.03e-07 8.75e-08 2.16e-07 5.68e-08 1.5e-07 6.08e-08 1.62e-07 1.05e-07 2.45e-07 8.15e-08 5.36e-08 7.89e-08 4.45e-08 1.64e-07 7.16e-08 6.58e-08 1.27e-07 1.39e-07 1.58e-07 2.68e-08 2.17e-07 1.22e-07 1.2e-07 1.17e-07 1.37e-07 1.1e-07 1.09e-07 3.99e-08 3.29e-08 9.52e-08 6.98e-08 3.07e-08 5.96e-08 8.57e-08 5.95e-08 6.31e-08 6.14e-08 1.6e-07 4.17e-08 1.08e-08 3.4e-08 9.65e-09 8.81e-08 1.95e-09 5.02e-08