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Genes within 1Mb (chr1:64192259:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 598848 sc-eQTL 3.61e-01 -0.0741 0.081 0.442 B L1
ENSG00000088035 ALG6 824684 sc-eQTL 8.31e-01 0.0179 0.084 0.442 B L1
ENSG00000142856 ITGB3BP 598538 sc-eQTL 9.51e-01 -0.00567 0.093 0.442 B L1
ENSG00000162434 JAK1 -875495 sc-eQTL 7.71e-01 0.0166 0.0572 0.442 B L1
ENSG00000203965 EFCAB7 668887 sc-eQTL 2.76e-01 -0.104 0.095 0.442 B L1
ENSG00000079739 PGM1 598848 sc-eQTL 9.01e-01 0.00862 0.0692 0.442 CD4T L1
ENSG00000088035 ALG6 824684 sc-eQTL 2.21e-02 0.174 0.0754 0.442 CD4T L1
ENSG00000142856 ITGB3BP 598538 sc-eQTL 1.83e-01 -0.118 0.0882 0.442 CD4T L1
ENSG00000158966 CACHD1 -277870 sc-eQTL 1.37e-01 0.0784 0.0526 0.442 CD4T L1
ENSG00000162434 JAK1 -875495 sc-eQTL 4.76e-01 0.0395 0.0553 0.442 CD4T L1
ENSG00000203965 EFCAB7 668887 sc-eQTL 5.33e-01 0.0496 0.0794 0.442 CD4T L1
ENSG00000079739 PGM1 598848 sc-eQTL 7.32e-02 -0.136 0.0758 0.442 CD8T L1
ENSG00000088035 ALG6 824684 sc-eQTL 5.37e-01 0.052 0.0841 0.442 CD8T L1
ENSG00000142856 ITGB3BP 598538 sc-eQTL 7.38e-01 -0.0304 0.0906 0.442 CD8T L1
ENSG00000158966 CACHD1 -277870 sc-eQTL 1.10e-01 0.0731 0.0456 0.442 CD8T L1
ENSG00000162434 JAK1 -875495 sc-eQTL 8.99e-01 -0.00914 0.0722 0.442 CD8T L1
ENSG00000203965 EFCAB7 668887 sc-eQTL 6.37e-01 -0.0427 0.0903 0.442 CD8T L1
ENSG00000079739 PGM1 598848 sc-eQTL 2.67e-01 -0.0935 0.0839 0.441 DC L1
ENSG00000088035 ALG6 824684 sc-eQTL 5.54e-01 0.0515 0.0868 0.441 DC L1
ENSG00000142856 ITGB3BP 598538 sc-eQTL 1.58e-01 -0.137 0.0969 0.441 DC L1
ENSG00000162433 AK4 -955290 sc-eQTL 4.29e-01 0.061 0.077 0.441 DC L1
ENSG00000162434 JAK1 -875495 sc-eQTL 8.12e-02 -0.112 0.0637 0.441 DC L1
ENSG00000162437 RAVER2 -552836 sc-eQTL 6.91e-02 0.149 0.0816 0.441 DC L1
ENSG00000203965 EFCAB7 668887 sc-eQTL 4.89e-01 -0.0587 0.0847 0.441 DC L1
ENSG00000079739 PGM1 598848 sc-eQTL 8.36e-01 -0.0171 0.0825 0.442 Mono L1
ENSG00000088035 ALG6 824684 sc-eQTL 5.50e-01 -0.0516 0.0861 0.442 Mono L1
ENSG00000142856 ITGB3BP 598538 sc-eQTL 3.73e-01 0.0793 0.0888 0.442 Mono L1
ENSG00000162433 AK4 -955290 sc-eQTL 8.59e-01 0.0149 0.0839 0.442 Mono L1
ENSG00000162434 JAK1 -875495 sc-eQTL 3.82e-01 0.0524 0.0597 0.442 Mono L1
ENSG00000079739 PGM1 598848 sc-eQTL 4.74e-01 -0.0506 0.0705 0.442 NK L1
ENSG00000088035 ALG6 824684 sc-eQTL 8.14e-02 0.144 0.0822 0.442 NK L1
ENSG00000142856 ITGB3BP 598538 sc-eQTL 2.29e-01 -0.109 0.0907 0.442 NK L1
ENSG00000162434 JAK1 -875495 sc-eQTL 2.40e-01 -0.0498 0.0423 0.442 NK L1
ENSG00000203965 EFCAB7 668887 sc-eQTL 7.49e-01 -0.0316 0.0988 0.442 NK L1
ENSG00000079739 PGM1 598848 sc-eQTL 1.47e-01 -0.116 0.0793 0.442 Other_T L1
ENSG00000088035 ALG6 824684 sc-eQTL 7.12e-01 -0.0296 0.0801 0.442 Other_T L1
ENSG00000142856 ITGB3BP 598538 sc-eQTL 3.26e-01 0.0616 0.0626 0.442 Other_T L1
ENSG00000162434 JAK1 -875495 sc-eQTL 9.51e-01 0.00377 0.0608 0.442 Other_T L1
ENSG00000162437 RAVER2 -552836 sc-eQTL 2.69e-01 -0.0977 0.0881 0.442 Other_T L1
ENSG00000203965 EFCAB7 668887 sc-eQTL 2.58e-01 -0.11 0.0966 0.442 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 598848 sc-eQTL 1.27e-02 -0.263 0.104 0.434 B_Activated L2
ENSG00000088035 ALG6 824684 sc-eQTL 6.32e-01 -0.0488 0.102 0.434 B_Activated L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 5.72e-01 0.0551 0.0973 0.434 B_Activated L2
ENSG00000162434 JAK1 -875495 sc-eQTL 9.65e-01 -0.00426 0.0972 0.434 B_Activated L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 3.23e-01 -0.0911 0.092 0.434 B_Activated L2
ENSG00000079739 PGM1 598848 sc-eQTL 2.56e-01 0.109 0.0957 0.442 B_Intermediate L2
ENSG00000088035 ALG6 824684 sc-eQTL 7.11e-01 0.0361 0.0975 0.442 B_Intermediate L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 5.18e-01 -0.0608 0.0939 0.442 B_Intermediate L2
ENSG00000162434 JAK1 -875495 sc-eQTL 9.38e-01 0.00634 0.0811 0.442 B_Intermediate L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 6.27e-01 -0.0452 0.093 0.442 B_Intermediate L2
ENSG00000079739 PGM1 598848 sc-eQTL 8.63e-02 -0.16 0.093 0.444 B_Memory L2
ENSG00000088035 ALG6 824684 sc-eQTL 3.65e-01 0.0863 0.095 0.444 B_Memory L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 6.03e-01 -0.0505 0.097 0.444 B_Memory L2
ENSG00000162434 JAK1 -875495 sc-eQTL 3.86e-01 -0.07 0.0805 0.444 B_Memory L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 5.97e-01 -0.051 0.0963 0.444 B_Memory L2
ENSG00000079739 PGM1 598848 sc-eQTL 6.35e-01 -0.0457 0.096 0.442 B_Naive1 L2
ENSG00000088035 ALG6 824684 sc-eQTL 9.52e-01 0.00578 0.0964 0.442 B_Naive1 L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 4.98e-01 0.0641 0.0943 0.442 B_Naive1 L2
ENSG00000162434 JAK1 -875495 sc-eQTL 2.23e-01 0.0888 0.0727 0.442 B_Naive1 L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 8.09e-01 0.0244 0.101 0.442 B_Naive1 L2
ENSG00000079739 PGM1 598848 sc-eQTL 3.99e-01 -0.0791 0.0936 0.444 B_Naive2 L2
ENSG00000088035 ALG6 824684 sc-eQTL 3.87e-01 -0.0846 0.0976 0.444 B_Naive2 L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 2.74e-01 -0.107 0.0979 0.444 B_Naive2 L2
ENSG00000162434 JAK1 -875495 sc-eQTL 6.87e-02 0.138 0.0755 0.444 B_Naive2 L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 7.36e-01 -0.033 0.0977 0.444 B_Naive2 L2
ENSG00000079739 PGM1 598848 sc-eQTL 7.73e-01 0.0273 0.0945 0.439 CD4_CTL L2
ENSG00000088035 ALG6 824684 sc-eQTL 2.67e-01 0.111 0.0996 0.439 CD4_CTL L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 9.96e-01 0.000462 0.0967 0.439 CD4_CTL L2
ENSG00000158966 CACHD1 -277870 sc-eQTL 5.74e-01 -0.0197 0.0351 0.439 CD4_CTL L2
ENSG00000162434 JAK1 -875495 sc-eQTL 7.47e-01 -0.028 0.0867 0.439 CD4_CTL L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 2.84e-01 0.0985 0.0916 0.439 CD4_CTL L2
ENSG00000079739 PGM1 598848 sc-eQTL 6.37e-01 -0.0368 0.0778 0.442 CD4_Naive L2
ENSG00000088035 ALG6 824684 sc-eQTL 2.70e-01 0.0932 0.0843 0.442 CD4_Naive L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 5.59e-01 -0.0525 0.0897 0.442 CD4_Naive L2
ENSG00000158966 CACHD1 -277870 sc-eQTL 1.20e-01 0.0825 0.0529 0.442 CD4_Naive L2
ENSG00000162434 JAK1 -875495 sc-eQTL 9.80e-01 -0.00134 0.0543 0.442 CD4_Naive L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 1.54e-01 0.127 0.0887 0.442 CD4_Naive L2
ENSG00000079739 PGM1 598848 sc-eQTL 3.73e-01 0.0718 0.0803 0.442 CD4_TCM L2
ENSG00000088035 ALG6 824684 sc-eQTL 4.15e-01 0.0762 0.0933 0.442 CD4_TCM L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 1.83e-01 -0.126 0.0947 0.442 CD4_TCM L2
ENSG00000158966 CACHD1 -277870 sc-eQTL 1.17e-01 0.118 0.0749 0.442 CD4_TCM L2
ENSG00000162434 JAK1 -875495 sc-eQTL 7.81e-01 0.0172 0.0616 0.442 CD4_TCM L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 1.91e-02 -0.215 0.0908 0.442 CD4_TCM L2
ENSG00000079739 PGM1 598848 sc-eQTL 9.81e-01 -0.0022 0.0943 0.442 CD4_TEM L2
ENSG00000088035 ALG6 824684 sc-eQTL 1.12e-03 0.305 0.0924 0.442 CD4_TEM L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 2.48e-01 -0.107 0.0923 0.442 CD4_TEM L2
ENSG00000158966 CACHD1 -277870 sc-eQTL 8.84e-01 -0.00835 0.0572 0.442 CD4_TEM L2
ENSG00000162434 JAK1 -875495 sc-eQTL 2.47e-01 0.0941 0.0812 0.442 CD4_TEM L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 6.95e-02 0.174 0.0952 0.442 CD4_TEM L2
ENSG00000079739 PGM1 598848 sc-eQTL 5.92e-01 -0.0465 0.0864 0.442 CD8_CTL L2
ENSG00000088035 ALG6 824684 sc-eQTL 9.18e-01 -0.0095 0.092 0.442 CD8_CTL L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 8.02e-01 -0.0242 0.0966 0.442 CD8_CTL L2
ENSG00000158966 CACHD1 -277870 sc-eQTL 3.90e-01 0.0352 0.0409 0.442 CD8_CTL L2
ENSG00000162434 JAK1 -875495 sc-eQTL 9.73e-01 0.00257 0.0765 0.442 CD8_CTL L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 8.50e-01 -0.0187 0.0989 0.442 CD8_CTL L2
ENSG00000079739 PGM1 598848 sc-eQTL 8.54e-02 -0.15 0.0868 0.442 CD8_Naive L2
ENSG00000088035 ALG6 824684 sc-eQTL 7.62e-01 0.0275 0.0905 0.442 CD8_Naive L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 8.72e-01 -0.0146 0.0909 0.442 CD8_Naive L2
ENSG00000158966 CACHD1 -277870 sc-eQTL 2.49e-01 0.0726 0.0628 0.442 CD8_Naive L2
ENSG00000162434 JAK1 -875495 sc-eQTL 9.31e-01 -0.00654 0.0758 0.442 CD8_Naive L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 9.17e-01 -0.00898 0.0857 0.442 CD8_Naive L2
ENSG00000079739 PGM1 598848 sc-eQTL 3.15e-01 0.0953 0.0945 0.442 CD8_TCM L2
ENSG00000088035 ALG6 824684 sc-eQTL 5.47e-01 0.0578 0.0959 0.442 CD8_TCM L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 8.01e-01 0.0235 0.0931 0.442 CD8_TCM L2
ENSG00000158966 CACHD1 -277870 sc-eQTL 2.35e-02 0.11 0.0482 0.442 CD8_TCM L2
ENSG00000162434 JAK1 -875495 sc-eQTL 9.73e-02 0.13 0.0781 0.442 CD8_TCM L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 9.92e-01 -0.000899 0.0949 0.442 CD8_TCM L2
ENSG00000079739 PGM1 598848 sc-eQTL 7.35e-01 0.0339 0.1 0.436 CD8_TEM L2
ENSG00000088035 ALG6 824684 sc-eQTL 9.26e-01 0.00932 0.101 0.436 CD8_TEM L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 1.89e-02 -0.237 0.1 0.436 CD8_TEM L2
ENSG00000158966 CACHD1 -277870 sc-eQTL 4.29e-01 0.0163 0.0206 0.436 CD8_TEM L2
ENSG00000162434 JAK1 -875495 sc-eQTL 3.23e-01 0.0965 0.0974 0.436 CD8_TEM L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 6.28e-02 -0.182 0.0975 0.436 CD8_TEM L2
ENSG00000079739 PGM1 598848 sc-eQTL 1.87e-01 -0.122 0.0921 0.442 MAIT L2
ENSG00000088035 ALG6 824684 sc-eQTL 8.11e-01 0.022 0.0916 0.442 MAIT L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 7.93e-01 0.0243 0.0927 0.442 MAIT L2
ENSG00000162434 JAK1 -875495 sc-eQTL 9.20e-01 0.00846 0.0837 0.442 MAIT L2
ENSG00000162437 RAVER2 -552836 sc-eQTL 5.71e-01 -0.0506 0.0891 0.442 MAIT L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 8.26e-01 0.021 0.0954 0.442 MAIT L2
ENSG00000079739 PGM1 598848 sc-eQTL 5.71e-01 0.0532 0.0937 0.442 NK_CD56bright L2
ENSG00000088035 ALG6 824684 sc-eQTL 7.86e-01 0.0261 0.0961 0.442 NK_CD56bright L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 1.12e-01 -0.154 0.0963 0.442 NK_CD56bright L2
ENSG00000162434 JAK1 -875495 sc-eQTL 6.86e-01 -0.0248 0.0611 0.442 NK_CD56bright L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 1.76e-01 -0.129 0.0952 0.442 NK_CD56bright L2
ENSG00000079739 PGM1 598848 sc-eQTL 7.08e-01 -0.028 0.0745 0.442 NK_CD56dim L2
ENSG00000088035 ALG6 824684 sc-eQTL 1.13e-01 0.149 0.094 0.442 NK_CD56dim L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 4.48e-01 -0.0721 0.095 0.442 NK_CD56dim L2
ENSG00000162434 JAK1 -875495 sc-eQTL 7.02e-01 -0.0193 0.0502 0.442 NK_CD56dim L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 4.04e-01 0.0858 0.103 0.442 NK_CD56dim L2
ENSG00000079739 PGM1 598848 sc-eQTL 1.28e-01 -0.154 0.1 0.447 NK_HLA L2
ENSG00000088035 ALG6 824684 sc-eQTL 1.85e-01 0.139 0.104 0.447 NK_HLA L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 4.64e-01 -0.0717 0.0977 0.447 NK_HLA L2
ENSG00000162434 JAK1 -875495 sc-eQTL 9.82e-01 0.00152 0.0654 0.447 NK_HLA L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 6.79e-02 -0.17 0.0924 0.447 NK_HLA L2
ENSG00000079739 PGM1 598848 sc-eQTL 6.91e-01 0.0316 0.0795 0.442 NK_cytokine L2
ENSG00000088035 ALG6 824684 sc-eQTL 9.68e-01 -0.00366 0.0898 0.442 NK_cytokine L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 6.85e-01 0.0357 0.0881 0.442 NK_cytokine L2
ENSG00000162434 JAK1 -875495 sc-eQTL 7.58e-01 -0.0162 0.0525 0.442 NK_cytokine L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 7.46e-01 -0.0305 0.0939 0.442 NK_cytokine L2
ENSG00000079739 PGM1 598848 sc-eQTL 8.16e-01 0.0265 0.113 0.426 PB L2
ENSG00000088035 ALG6 824684 sc-eQTL 5.91e-01 0.0642 0.119 0.426 PB L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 4.68e-01 0.0806 0.111 0.426 PB L2
ENSG00000162434 JAK1 -875495 sc-eQTL 2.42e-01 0.0978 0.0831 0.426 PB L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 3.41e-01 -0.116 0.121 0.426 PB L2
ENSG00000079739 PGM1 598848 sc-eQTL 3.21e-01 -0.0873 0.0878 0.443 Pro_T L2
ENSG00000088035 ALG6 824684 sc-eQTL 9.12e-01 0.00988 0.0896 0.443 Pro_T L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 4.89e-01 0.0546 0.0788 0.443 Pro_T L2
ENSG00000162434 JAK1 -875495 sc-eQTL 6.83e-01 0.0255 0.0622 0.443 Pro_T L2
ENSG00000162437 RAVER2 -552836 sc-eQTL 5.23e-01 -0.0525 0.082 0.443 Pro_T L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 1.85e-01 -0.121 0.0913 0.443 Pro_T L2
ENSG00000079739 PGM1 598848 sc-eQTL 1.86e-01 0.121 0.0913 0.442 Treg L2
ENSG00000088035 ALG6 824684 sc-eQTL 9.63e-02 0.163 0.0974 0.442 Treg L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 2.06e-01 -0.122 0.0959 0.442 Treg L2
ENSG00000158966 CACHD1 -277870 sc-eQTL 1.34e-01 0.109 0.0723 0.442 Treg L2
ENSG00000162434 JAK1 -875495 sc-eQTL 9.89e-02 0.128 0.077 0.442 Treg L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 6.51e-01 -0.0417 0.092 0.442 Treg L2
ENSG00000079739 PGM1 598848 sc-eQTL 7.86e-01 -0.0243 0.0893 0.439 cDC L2
ENSG00000088035 ALG6 824684 sc-eQTL 9.04e-01 0.0109 0.0905 0.439 cDC L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 1.02e-02 -0.249 0.096 0.439 cDC L2
ENSG00000162433 AK4 -955290 sc-eQTL 3.47e-01 0.0768 0.0815 0.439 cDC L2
ENSG00000162434 JAK1 -875495 sc-eQTL 1.70e-01 -0.104 0.0758 0.439 cDC L2
ENSG00000162437 RAVER2 -552836 sc-eQTL 8.80e-02 0.143 0.0831 0.439 cDC L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 9.20e-01 -0.00789 0.0786 0.439 cDC L2
ENSG00000079739 PGM1 598848 sc-eQTL 5.70e-01 -0.049 0.0861 0.442 cMono_IL1B L2
ENSG00000088035 ALG6 824684 sc-eQTL 4.17e-01 -0.0701 0.0861 0.442 cMono_IL1B L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 3.69e-01 0.0814 0.0904 0.442 cMono_IL1B L2
ENSG00000162433 AK4 -955290 sc-eQTL 7.91e-01 0.0226 0.0852 0.442 cMono_IL1B L2
ENSG00000162434 JAK1 -875495 sc-eQTL 8.16e-01 -0.0181 0.0775 0.442 cMono_IL1B L2
ENSG00000079739 PGM1 598848 sc-eQTL 7.08e-01 0.0354 0.0946 0.442 cMono_S100A L2
ENSG00000088035 ALG6 824684 sc-eQTL 5.79e-01 0.0532 0.0958 0.442 cMono_S100A L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 8.44e-01 0.0171 0.0868 0.442 cMono_S100A L2
ENSG00000162433 AK4 -955290 sc-eQTL 8.42e-01 0.0171 0.0858 0.442 cMono_S100A L2
ENSG00000162434 JAK1 -875495 sc-eQTL 2.18e-01 0.0974 0.0789 0.442 cMono_S100A L2
ENSG00000079739 PGM1 598848 sc-eQTL 2.23e-01 -0.129 0.105 0.439 gdT L2
ENSG00000088035 ALG6 824684 sc-eQTL 6.46e-01 -0.0518 0.113 0.439 gdT L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 8.82e-01 0.0167 0.112 0.439 gdT L2
ENSG00000162434 JAK1 -875495 sc-eQTL 3.24e-01 -0.111 0.112 0.439 gdT L2
ENSG00000162437 RAVER2 -552836 sc-eQTL 1.05e-01 0.16 0.0982 0.439 gdT L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 9.61e-01 0.00533 0.11 0.439 gdT L2
ENSG00000079739 PGM1 598848 sc-eQTL 6.75e-01 -0.0402 0.0957 0.436 intMono L2
ENSG00000088035 ALG6 824684 sc-eQTL 6.39e-01 -0.0418 0.0891 0.436 intMono L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 1.65e-01 -0.133 0.0953 0.436 intMono L2
ENSG00000162433 AK4 -955290 sc-eQTL 8.30e-01 0.0182 0.0845 0.436 intMono L2
ENSG00000162434 JAK1 -875495 sc-eQTL 9.91e-01 0.000875 0.0782 0.436 intMono L2
ENSG00000079739 PGM1 598848 sc-eQTL 7.34e-01 -0.0293 0.0863 0.437 ncMono L2
ENSG00000088035 ALG6 824684 sc-eQTL 1.68e-01 -0.131 0.0943 0.437 ncMono L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 2.06e-01 0.115 0.0908 0.437 ncMono L2
ENSG00000162433 AK4 -955290 sc-eQTL 2.10e-01 -0.0995 0.0792 0.437 ncMono L2
ENSG00000162434 JAK1 -875495 sc-eQTL 3.00e-01 0.0667 0.0641 0.437 ncMono L2
ENSG00000079739 PGM1 598848 sc-eQTL 3.24e-01 -0.103 0.104 0.438 pDC L2
ENSG00000088035 ALG6 824684 sc-eQTL 5.56e-01 0.0596 0.101 0.438 pDC L2
ENSG00000142856 ITGB3BP 598538 sc-eQTL 9.01e-01 0.013 0.104 0.438 pDC L2
ENSG00000162433 AK4 -955290 sc-eQTL 9.11e-01 -0.00702 0.0628 0.438 pDC L2
ENSG00000162434 JAK1 -875495 sc-eQTL 9.91e-01 -0.00098 0.0839 0.438 pDC L2
ENSG00000162437 RAVER2 -552836 sc-eQTL 5.49e-01 0.0567 0.0944 0.438 pDC L2
ENSG00000203965 EFCAB7 668887 sc-eQTL 4.99e-01 0.0624 0.092 0.438 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 598848 sc-eQTL 2.14e-01 -0.111 0.0888 0.442 B_Memory LOneK1K
ENSG00000088035 ALG6 824684 sc-eQTL 2.69e-01 0.109 0.0983 0.442 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 598538 sc-eQTL 5.29e-01 -0.0573 0.0908 0.442 B_Memory LOneK1K
ENSG00000162434 JAK1 -875495 sc-eQTL 4.54e-01 -0.0538 0.0716 0.442 B_Memory LOneK1K
ENSG00000203965 EFCAB7 668887 sc-eQTL 6.84e-01 -0.0386 0.0947 0.442 B_Memory LOneK1K
ENSG00000079739 PGM1 598848 sc-eQTL 4.14e-01 -0.0769 0.0939 0.442 B_Naive LOneK1K
ENSG00000088035 ALG6 824684 sc-eQTL 6.15e-01 -0.0488 0.0968 0.442 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 598538 sc-eQTL 9.94e-01 -0.000679 0.0975 0.442 B_Naive LOneK1K
ENSG00000162434 JAK1 -875495 sc-eQTL 7.46e-02 0.126 0.0702 0.442 B_Naive LOneK1K
ENSG00000203965 EFCAB7 668887 sc-eQTL 8.94e-01 0.0131 0.098 0.442 B_Naive LOneK1K
ENSG00000079739 PGM1 598848 sc-eQTL 9.00e-01 0.011 0.0879 0.442 CD14_Mono LOneK1K
ENSG00000088035 ALG6 824684 sc-eQTL 6.11e-01 -0.0433 0.0851 0.442 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 598538 sc-eQTL 4.17e-01 0.0712 0.0875 0.442 CD14_Mono LOneK1K
ENSG00000162433 AK4 -955290 sc-eQTL 9.91e-01 0.000965 0.0866 0.442 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -875495 sc-eQTL 6.72e-01 0.0307 0.0725 0.442 CD14_Mono LOneK1K
ENSG00000079739 PGM1 598848 sc-eQTL 4.04e-01 -0.0697 0.0833 0.442 CD16_Mono LOneK1K
ENSG00000088035 ALG6 824684 sc-eQTL 1.05e-01 -0.153 0.0942 0.442 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 598538 sc-eQTL 6.03e-01 0.0483 0.0928 0.442 CD16_Mono LOneK1K
ENSG00000162433 AK4 -955290 sc-eQTL 6.64e-01 -0.0358 0.0821 0.442 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -875495 sc-eQTL 4.25e-01 0.0442 0.0552 0.442 CD16_Mono LOneK1K
ENSG00000079739 PGM1 598848 sc-eQTL 3.29e-01 -0.0703 0.0718 0.442 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 824684 sc-eQTL 9.52e-02 0.144 0.0858 0.442 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 598538 sc-eQTL 3.53e-01 -0.085 0.0913 0.442 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -875495 sc-eQTL 4.20e-01 -0.0351 0.0434 0.442 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 668887 sc-eQTL 7.90e-01 0.0269 0.101 0.442 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000185483 ROR1 418242 pQTL 5.37e-12 -0.0911 0.0131 0.00837 0.00359 0.457

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000233877 \N -749720 2.76e-07 1.33e-07 5.64e-08 2.05e-07 1.01e-07 8.33e-08 1.81e-07 5.85e-08 1.44e-07 6.75e-08 1.67e-07 1.15e-07 1.79e-07 7.95e-08 5.69e-08 7.89e-08 4.31e-08 1.51e-07 7.12e-08 5.33e-08 1.27e-07 1.31e-07 1.58e-07 3.07e-08 1.85e-07 1.26e-07 1.17e-07 1.12e-07 1.26e-07 1.03e-07 1.08e-07 3.9e-08 3.29e-08 8.89e-08 2.97e-08 3.22e-08 4.62e-08 8.2e-08 6.41e-08 4.41e-08 5.1e-08 1.46e-07 5.24e-08 1.44e-08 2.82e-08 1.71e-08 9.96e-08 1.93e-09 4.83e-08