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Genes within 1Mb (chr1:64186461:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 593050 sc-eQTL 4.43e-01 -0.0617 0.0803 0.363 B L1
ENSG00000088035 ALG6 818886 sc-eQTL 3.30e-01 0.0812 0.0831 0.363 B L1
ENSG00000142856 ITGB3BP 592740 sc-eQTL 8.10e-01 0.0222 0.0921 0.363 B L1
ENSG00000162434 JAK1 -881293 sc-eQTL 8.16e-01 0.0132 0.0567 0.363 B L1
ENSG00000203965 EFCAB7 663089 sc-eQTL 3.58e-01 -0.0868 0.0942 0.363 B L1
ENSG00000079739 PGM1 593050 sc-eQTL 8.95e-01 0.00908 0.0687 0.363 CD4T L1
ENSG00000088035 ALG6 818886 sc-eQTL 6.10e-01 0.0387 0.0758 0.363 CD4T L1
ENSG00000142856 ITGB3BP 592740 sc-eQTL 2.99e-01 -0.0914 0.0878 0.363 CD4T L1
ENSG00000158966 CACHD1 -283668 sc-eQTL 2.31e-01 0.0629 0.0524 0.363 CD4T L1
ENSG00000162434 JAK1 -881293 sc-eQTL 7.29e-01 0.0191 0.055 0.363 CD4T L1
ENSG00000203965 EFCAB7 663089 sc-eQTL 6.43e-01 0.0367 0.079 0.363 CD4T L1
ENSG00000079739 PGM1 593050 sc-eQTL 3.05e-02 -0.163 0.0748 0.363 CD8T L1
ENSG00000088035 ALG6 818886 sc-eQTL 5.60e-01 -0.0486 0.0833 0.363 CD8T L1
ENSG00000142856 ITGB3BP 592740 sc-eQTL 5.37e-01 0.0555 0.0897 0.363 CD8T L1
ENSG00000158966 CACHD1 -283668 sc-eQTL 3.38e-01 0.0435 0.0453 0.363 CD8T L1
ENSG00000162434 JAK1 -881293 sc-eQTL 8.94e-01 0.00951 0.0716 0.363 CD8T L1
ENSG00000203965 EFCAB7 663089 sc-eQTL 8.88e-01 0.0126 0.0895 0.363 CD8T L1
ENSG00000079739 PGM1 593050 sc-eQTL 3.18e-01 -0.0854 0.0854 0.358 DC L1
ENSG00000088035 ALG6 818886 sc-eQTL 2.62e-01 -0.099 0.088 0.358 DC L1
ENSG00000142856 ITGB3BP 592740 sc-eQTL 3.10e-02 -0.213 0.0979 0.358 DC L1
ENSG00000162433 AK4 -961088 sc-eQTL 4.97e-01 0.0533 0.0783 0.358 DC L1
ENSG00000162434 JAK1 -881293 sc-eQTL 8.81e-01 -0.00982 0.0652 0.358 DC L1
ENSG00000162437 RAVER2 -558634 sc-eQTL 9.88e-01 0.00126 0.0836 0.358 DC L1
ENSG00000203965 EFCAB7 663089 sc-eQTL 2.43e-01 -0.101 0.0859 0.358 DC L1
ENSG00000079739 PGM1 593050 sc-eQTL 2.64e-01 -0.0926 0.0827 0.363 Mono L1
ENSG00000088035 ALG6 818886 sc-eQTL 9.74e-01 0.00279 0.0865 0.363 Mono L1
ENSG00000142856 ITGB3BP 592740 sc-eQTL 7.41e-01 0.0296 0.0894 0.363 Mono L1
ENSG00000162433 AK4 -961088 sc-eQTL 6.31e-01 -0.0405 0.0843 0.363 Mono L1
ENSG00000162434 JAK1 -881293 sc-eQTL 6.71e-01 0.0256 0.0601 0.363 Mono L1
ENSG00000079739 PGM1 593050 sc-eQTL 5.85e-01 -0.0385 0.0703 0.363 NK L1
ENSG00000088035 ALG6 818886 sc-eQTL 7.76e-01 -0.0235 0.0825 0.363 NK L1
ENSG00000142856 ITGB3BP 592740 sc-eQTL 7.72e-01 0.0263 0.0907 0.363 NK L1
ENSG00000162434 JAK1 -881293 sc-eQTL 3.04e-01 -0.0434 0.0421 0.363 NK L1
ENSG00000203965 EFCAB7 663089 sc-eQTL 6.40e-01 -0.046 0.0984 0.363 NK L1
ENSG00000079739 PGM1 593050 sc-eQTL 9.89e-01 -0.00109 0.0801 0.363 Other_T L1
ENSG00000088035 ALG6 818886 sc-eQTL 3.98e-01 -0.0681 0.0803 0.363 Other_T L1
ENSG00000142856 ITGB3BP 592740 sc-eQTL 6.61e-01 0.0277 0.0631 0.363 Other_T L1
ENSG00000162434 JAK1 -881293 sc-eQTL 8.32e-01 -0.013 0.0611 0.363 Other_T L1
ENSG00000162437 RAVER2 -558634 sc-eQTL 2.07e-01 -0.112 0.0885 0.363 Other_T L1
ENSG00000203965 EFCAB7 663089 sc-eQTL 2.90e-01 -0.103 0.0971 0.363 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 593050 sc-eQTL 9.41e-03 -0.274 0.104 0.352 B_Activated L2
ENSG00000088035 ALG6 818886 sc-eQTL 9.97e-01 0.000327 0.102 0.352 B_Activated L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 1.88e-01 0.128 0.0971 0.352 B_Activated L2
ENSG00000162434 JAK1 -881293 sc-eQTL 6.47e-01 -0.0447 0.0973 0.352 B_Activated L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 2.91e-01 -0.0975 0.0921 0.352 B_Activated L2
ENSG00000079739 PGM1 593050 sc-eQTL 5.71e-01 -0.0547 0.0963 0.363 B_Intermediate L2
ENSG00000088035 ALG6 818886 sc-eQTL 7.42e-01 -0.0322 0.0978 0.363 B_Intermediate L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 5.51e-01 -0.0563 0.0942 0.363 B_Intermediate L2
ENSG00000162434 JAK1 -881293 sc-eQTL 3.48e-01 0.0763 0.0812 0.363 B_Intermediate L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 3.11e-01 -0.0945 0.0931 0.363 B_Intermediate L2
ENSG00000079739 PGM1 593050 sc-eQTL 3.52e-02 -0.201 0.0947 0.364 B_Memory L2
ENSG00000088035 ALG6 818886 sc-eQTL 6.72e-02 0.178 0.0965 0.364 B_Memory L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 7.12e-01 -0.0366 0.0992 0.364 B_Memory L2
ENSG00000162434 JAK1 -881293 sc-eQTL 7.76e-01 -0.0235 0.0824 0.364 B_Memory L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 9.24e-01 -0.00946 0.0985 0.364 B_Memory L2
ENSG00000079739 PGM1 593050 sc-eQTL 6.12e-01 0.0484 0.0951 0.363 B_Naive1 L2
ENSG00000088035 ALG6 818886 sc-eQTL 4.10e-01 0.0788 0.0954 0.363 B_Naive1 L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 2.57e-01 0.106 0.0933 0.363 B_Naive1 L2
ENSG00000162434 JAK1 -881293 sc-eQTL 6.43e-01 0.0336 0.0723 0.363 B_Naive1 L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 8.36e-01 0.0207 0.0998 0.363 B_Naive1 L2
ENSG00000079739 PGM1 593050 sc-eQTL 9.37e-01 -0.00735 0.0929 0.365 B_Naive2 L2
ENSG00000088035 ALG6 818886 sc-eQTL 7.81e-01 -0.027 0.0969 0.365 B_Naive2 L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 7.67e-01 0.0288 0.0972 0.365 B_Naive2 L2
ENSG00000162434 JAK1 -881293 sc-eQTL 3.11e-01 0.0764 0.0752 0.365 B_Naive2 L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 9.53e-01 0.00577 0.0968 0.365 B_Naive2 L2
ENSG00000079739 PGM1 593050 sc-eQTL 9.49e-01 0.00608 0.0947 0.357 CD4_CTL L2
ENSG00000088035 ALG6 818886 sc-eQTL 8.80e-01 0.0152 0.1 0.357 CD4_CTL L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 3.34e-01 -0.0937 0.0966 0.357 CD4_CTL L2
ENSG00000158966 CACHD1 -283668 sc-eQTL 2.90e-01 -0.0373 0.0351 0.357 CD4_CTL L2
ENSG00000162434 JAK1 -881293 sc-eQTL 9.00e-01 -0.0109 0.0868 0.357 CD4_CTL L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 4.56e-02 0.183 0.0911 0.357 CD4_CTL L2
ENSG00000079739 PGM1 593050 sc-eQTL 9.44e-01 -0.00542 0.0776 0.363 CD4_Naive L2
ENSG00000088035 ALG6 818886 sc-eQTL 8.70e-01 -0.0139 0.0843 0.363 CD4_Naive L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 8.17e-01 -0.0207 0.0895 0.363 CD4_Naive L2
ENSG00000158966 CACHD1 -283668 sc-eQTL 2.93e-01 0.0557 0.0529 0.363 CD4_Naive L2
ENSG00000162434 JAK1 -881293 sc-eQTL 8.78e-01 -0.00828 0.0541 0.363 CD4_Naive L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 1.94e-01 0.115 0.0885 0.363 CD4_Naive L2
ENSG00000079739 PGM1 593050 sc-eQTL 4.97e-01 0.0546 0.0801 0.363 CD4_TCM L2
ENSG00000088035 ALG6 818886 sc-eQTL 5.01e-01 0.0628 0.0931 0.363 CD4_TCM L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 3.87e-01 -0.0821 0.0946 0.363 CD4_TCM L2
ENSG00000158966 CACHD1 -283668 sc-eQTL 1.65e-01 0.104 0.0747 0.363 CD4_TCM L2
ENSG00000162434 JAK1 -881293 sc-eQTL 6.81e-01 0.0253 0.0614 0.363 CD4_TCM L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 1.70e-01 -0.126 0.0913 0.363 CD4_TCM L2
ENSG00000079739 PGM1 593050 sc-eQTL 9.43e-01 -0.00677 0.0945 0.363 CD4_TEM L2
ENSG00000088035 ALG6 818886 sc-eQTL 8.42e-02 0.164 0.0943 0.363 CD4_TEM L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 5.07e-01 -0.0616 0.0927 0.363 CD4_TEM L2
ENSG00000158966 CACHD1 -283668 sc-eQTL 2.04e-01 -0.0728 0.0572 0.363 CD4_TEM L2
ENSG00000162434 JAK1 -881293 sc-eQTL 8.85e-01 -0.0118 0.0816 0.363 CD4_TEM L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 1.76e-01 0.13 0.0958 0.363 CD4_TEM L2
ENSG00000079739 PGM1 593050 sc-eQTL 8.87e-01 -0.0123 0.086 0.363 CD8_CTL L2
ENSG00000088035 ALG6 818886 sc-eQTL 2.58e-01 -0.103 0.0911 0.363 CD8_CTL L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 8.86e-01 -0.0138 0.096 0.363 CD8_CTL L2
ENSG00000158966 CACHD1 -283668 sc-eQTL 9.02e-01 0.00502 0.0407 0.363 CD8_CTL L2
ENSG00000162434 JAK1 -881293 sc-eQTL 8.81e-01 -0.0114 0.076 0.363 CD8_CTL L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 8.66e-01 0.0166 0.0984 0.363 CD8_CTL L2
ENSG00000079739 PGM1 593050 sc-eQTL 3.65e-02 -0.181 0.086 0.363 CD8_Naive L2
ENSG00000088035 ALG6 818886 sc-eQTL 3.32e-01 -0.0874 0.0898 0.363 CD8_Naive L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 3.60e-01 0.0828 0.0903 0.363 CD8_Naive L2
ENSG00000158966 CACHD1 -283668 sc-eQTL 4.68e-01 0.0455 0.0626 0.363 CD8_Naive L2
ENSG00000162434 JAK1 -881293 sc-eQTL 9.57e-01 -0.00408 0.0754 0.363 CD8_Naive L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 6.38e-01 -0.0402 0.0852 0.363 CD8_Naive L2
ENSG00000079739 PGM1 593050 sc-eQTL 4.49e-01 0.0732 0.0964 0.361 CD8_TCM L2
ENSG00000088035 ALG6 818886 sc-eQTL 7.07e-01 0.0368 0.0977 0.361 CD8_TCM L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 1.12e-01 0.15 0.0942 0.361 CD8_TCM L2
ENSG00000158966 CACHD1 -283668 sc-eQTL 6.14e-02 0.0928 0.0493 0.361 CD8_TCM L2
ENSG00000162434 JAK1 -881293 sc-eQTL 7.33e-01 0.0273 0.08 0.361 CD8_TCM L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 5.21e-01 -0.0621 0.0965 0.361 CD8_TCM L2
ENSG00000079739 PGM1 593050 sc-eQTL 1.69e-01 -0.133 0.0966 0.361 CD8_TEM L2
ENSG00000088035 ALG6 818886 sc-eQTL 5.66e-01 -0.056 0.0973 0.361 CD8_TEM L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 1.28e-01 -0.149 0.0977 0.361 CD8_TEM L2
ENSG00000158966 CACHD1 -283668 sc-eQTL 4.66e-01 0.0146 0.02 0.361 CD8_TEM L2
ENSG00000162434 JAK1 -881293 sc-eQTL 9.68e-01 -0.00382 0.0946 0.361 CD8_TEM L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 1.82e-01 -0.127 0.0949 0.361 CD8_TEM L2
ENSG00000079739 PGM1 593050 sc-eQTL 3.40e-01 -0.0881 0.0921 0.361 MAIT L2
ENSG00000088035 ALG6 818886 sc-eQTL 7.95e-01 0.0238 0.0914 0.361 MAIT L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 6.81e-01 0.038 0.0925 0.361 MAIT L2
ENSG00000162434 JAK1 -881293 sc-eQTL 8.32e-01 0.0178 0.0835 0.361 MAIT L2
ENSG00000162437 RAVER2 -558634 sc-eQTL 3.04e-01 -0.0915 0.0888 0.361 MAIT L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 6.16e-01 0.0478 0.0952 0.361 MAIT L2
ENSG00000079739 PGM1 593050 sc-eQTL 4.66e-01 0.0692 0.0946 0.364 NK_CD56bright L2
ENSG00000088035 ALG6 818886 sc-eQTL 3.81e-01 -0.0851 0.0969 0.364 NK_CD56bright L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 1.52e-01 -0.14 0.0974 0.364 NK_CD56bright L2
ENSG00000162434 JAK1 -881293 sc-eQTL 9.31e-01 -0.00531 0.0617 0.364 NK_CD56bright L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 8.81e-01 -0.0145 0.0966 0.364 NK_CD56bright L2
ENSG00000079739 PGM1 593050 sc-eQTL 6.40e-01 -0.0347 0.0741 0.362 NK_CD56dim L2
ENSG00000088035 ALG6 818886 sc-eQTL 9.99e-01 0.000114 0.094 0.362 NK_CD56dim L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 4.17e-01 0.0768 0.0944 0.362 NK_CD56dim L2
ENSG00000162434 JAK1 -881293 sc-eQTL 9.92e-01 -0.000512 0.0499 0.362 NK_CD56dim L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 7.61e-01 0.031 0.102 0.362 NK_CD56dim L2
ENSG00000079739 PGM1 593050 sc-eQTL 6.79e-01 -0.0407 0.0983 0.368 NK_HLA L2
ENSG00000088035 ALG6 818886 sc-eQTL 7.53e-01 0.0321 0.102 0.368 NK_HLA L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 8.31e-01 0.0204 0.0952 0.368 NK_HLA L2
ENSG00000162434 JAK1 -881293 sc-eQTL 9.59e-01 -0.00326 0.0637 0.368 NK_HLA L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 4.07e-01 -0.0753 0.0905 0.368 NK_HLA L2
ENSG00000079739 PGM1 593050 sc-eQTL 7.65e-01 -0.0239 0.0798 0.362 NK_cytokine L2
ENSG00000088035 ALG6 818886 sc-eQTL 6.66e-01 -0.0389 0.0901 0.362 NK_cytokine L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 8.21e-01 0.02 0.0885 0.362 NK_cytokine L2
ENSG00000162434 JAK1 -881293 sc-eQTL 1.88e-01 -0.0693 0.0525 0.362 NK_cytokine L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 3.49e-01 -0.0883 0.0941 0.362 NK_cytokine L2
ENSG00000079739 PGM1 593050 sc-eQTL 8.91e-01 0.0159 0.116 0.356 PB L2
ENSG00000088035 ALG6 818886 sc-eQTL 6.30e-01 0.0587 0.122 0.356 PB L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 3.31e-01 0.11 0.113 0.356 PB L2
ENSG00000162434 JAK1 -881293 sc-eQTL 4.81e-01 0.0603 0.0852 0.356 PB L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 5.63e-01 -0.072 0.124 0.356 PB L2
ENSG00000079739 PGM1 593050 sc-eQTL 5.46e-01 0.0538 0.0889 0.363 Pro_T L2
ENSG00000088035 ALG6 818886 sc-eQTL 9.12e-01 0.00999 0.0906 0.363 Pro_T L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 1.83e-01 -0.106 0.0795 0.363 Pro_T L2
ENSG00000162434 JAK1 -881293 sc-eQTL 5.70e-01 0.0358 0.0629 0.363 Pro_T L2
ENSG00000162437 RAVER2 -558634 sc-eQTL 1.73e-01 -0.113 0.0827 0.363 Pro_T L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 1.64e-01 -0.129 0.0923 0.363 Pro_T L2
ENSG00000079739 PGM1 593050 sc-eQTL 9.89e-01 -0.00128 0.0911 0.363 Treg L2
ENSG00000088035 ALG6 818886 sc-eQTL 3.13e-01 0.0982 0.0971 0.363 Treg L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 1.03e-01 -0.156 0.095 0.363 Treg L2
ENSG00000158966 CACHD1 -283668 sc-eQTL 8.83e-02 0.123 0.0717 0.363 Treg L2
ENSG00000162434 JAK1 -881293 sc-eQTL 1.80e-01 0.103 0.0766 0.363 Treg L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 3.09e-01 -0.093 0.0912 0.363 Treg L2
ENSG00000079739 PGM1 593050 sc-eQTL 5.81e-01 -0.0502 0.0908 0.361 cDC L2
ENSG00000088035 ALG6 818886 sc-eQTL 3.69e-01 -0.0828 0.092 0.361 cDC L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 2.06e-02 -0.229 0.0981 0.361 cDC L2
ENSG00000162433 AK4 -961088 sc-eQTL 7.27e-01 0.0291 0.0831 0.361 cDC L2
ENSG00000162434 JAK1 -881293 sc-eQTL 6.53e-01 -0.0349 0.0775 0.361 cDC L2
ENSG00000162437 RAVER2 -558634 sc-eQTL 3.22e-01 0.0845 0.085 0.361 cDC L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 8.82e-01 -0.0119 0.08 0.361 cDC L2
ENSG00000079739 PGM1 593050 sc-eQTL 3.18e-01 -0.0863 0.0862 0.363 cMono_IL1B L2
ENSG00000088035 ALG6 818886 sc-eQTL 8.99e-01 0.011 0.0865 0.363 cMono_IL1B L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 2.99e-01 0.0944 0.0906 0.363 cMono_IL1B L2
ENSG00000162433 AK4 -961088 sc-eQTL 5.87e-01 0.0464 0.0854 0.363 cMono_IL1B L2
ENSG00000162434 JAK1 -881293 sc-eQTL 8.63e-01 -0.0134 0.0777 0.363 cMono_IL1B L2
ENSG00000079739 PGM1 593050 sc-eQTL 4.32e-01 -0.0752 0.0956 0.363 cMono_S100A L2
ENSG00000088035 ALG6 818886 sc-eQTL 3.05e-01 0.0995 0.0967 0.363 cMono_S100A L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 7.43e-01 -0.0288 0.0878 0.363 cMono_S100A L2
ENSG00000162433 AK4 -961088 sc-eQTL 7.37e-01 -0.0291 0.0867 0.363 cMono_S100A L2
ENSG00000162434 JAK1 -881293 sc-eQTL 7.95e-01 0.0208 0.08 0.363 cMono_S100A L2
ENSG00000079739 PGM1 593050 sc-eQTL 7.05e-01 -0.0417 0.11 0.355 gdT L2
ENSG00000088035 ALG6 818886 sc-eQTL 7.52e-01 -0.0372 0.117 0.355 gdT L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 5.40e-01 -0.0717 0.117 0.355 gdT L2
ENSG00000162434 JAK1 -881293 sc-eQTL 4.15e-01 -0.0958 0.117 0.355 gdT L2
ENSG00000162437 RAVER2 -558634 sc-eQTL 4.66e-01 0.0754 0.103 0.355 gdT L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 7.62e-01 -0.0348 0.115 0.355 gdT L2
ENSG00000079739 PGM1 593050 sc-eQTL 2.00e-01 -0.122 0.0951 0.362 intMono L2
ENSG00000088035 ALG6 818886 sc-eQTL 5.40e-01 -0.0545 0.0888 0.362 intMono L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 8.93e-01 -0.0129 0.0955 0.362 intMono L2
ENSG00000162433 AK4 -961088 sc-eQTL 3.37e-01 -0.0809 0.0841 0.362 intMono L2
ENSG00000162434 JAK1 -881293 sc-eQTL 8.59e-01 0.0139 0.078 0.362 intMono L2
ENSG00000079739 PGM1 593050 sc-eQTL 6.66e-01 -0.0371 0.0861 0.362 ncMono L2
ENSG00000088035 ALG6 818886 sc-eQTL 1.70e-01 -0.13 0.0942 0.362 ncMono L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 6.06e-01 0.047 0.0909 0.362 ncMono L2
ENSG00000162433 AK4 -961088 sc-eQTL 3.96e-01 -0.0674 0.0792 0.362 ncMono L2
ENSG00000162434 JAK1 -881293 sc-eQTL 4.04e-01 0.0536 0.0641 0.362 ncMono L2
ENSG00000079739 PGM1 593050 sc-eQTL 7.79e-01 -0.0293 0.104 0.364 pDC L2
ENSG00000088035 ALG6 818886 sc-eQTL 4.60e-01 -0.0751 0.101 0.364 pDC L2
ENSG00000142856 ITGB3BP 592740 sc-eQTL 4.89e-01 -0.0724 0.104 0.364 pDC L2
ENSG00000162433 AK4 -961088 sc-eQTL 5.43e-01 -0.0384 0.063 0.364 pDC L2
ENSG00000162434 JAK1 -881293 sc-eQTL 7.72e-01 0.0244 0.0842 0.364 pDC L2
ENSG00000162437 RAVER2 -558634 sc-eQTL 4.69e-02 -0.188 0.0937 0.364 pDC L2
ENSG00000203965 EFCAB7 663089 sc-eQTL 5.01e-01 -0.0624 0.0924 0.364 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 593050 sc-eQTL 3.17e-02 -0.191 0.0885 0.363 B_Memory LOneK1K
ENSG00000088035 ALG6 818886 sc-eQTL 3.29e-01 0.0966 0.0987 0.363 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 592740 sc-eQTL 7.76e-01 -0.026 0.0912 0.363 B_Memory LOneK1K
ENSG00000162434 JAK1 -881293 sc-eQTL 7.80e-01 -0.0201 0.072 0.363 B_Memory LOneK1K
ENSG00000203965 EFCAB7 663089 sc-eQTL 7.52e-01 -0.0301 0.0951 0.363 B_Memory LOneK1K
ENSG00000079739 PGM1 593050 sc-eQTL 7.80e-01 0.0259 0.0925 0.363 B_Naive LOneK1K
ENSG00000088035 ALG6 818886 sc-eQTL 7.09e-01 0.0356 0.0952 0.363 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 592740 sc-eQTL 3.36e-01 0.0923 0.0957 0.363 B_Naive LOneK1K
ENSG00000162434 JAK1 -881293 sc-eQTL 3.33e-01 0.0673 0.0694 0.363 B_Naive LOneK1K
ENSG00000203965 EFCAB7 663089 sc-eQTL 6.14e-01 0.0487 0.0964 0.363 B_Naive LOneK1K
ENSG00000079739 PGM1 593050 sc-eQTL 5.39e-01 -0.0541 0.088 0.363 CD14_Mono LOneK1K
ENSG00000088035 ALG6 818886 sc-eQTL 6.97e-01 0.0332 0.0853 0.363 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 592740 sc-eQTL 7.00e-01 0.0339 0.0878 0.363 CD14_Mono LOneK1K
ENSG00000162433 AK4 -961088 sc-eQTL 7.35e-01 -0.0294 0.0868 0.363 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -881293 sc-eQTL 8.09e-01 -0.0176 0.0726 0.363 CD14_Mono LOneK1K
ENSG00000079739 PGM1 593050 sc-eQTL 1.14e-01 -0.132 0.0831 0.362 CD16_Mono LOneK1K
ENSG00000088035 ALG6 818886 sc-eQTL 5.15e-02 -0.184 0.094 0.362 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 592740 sc-eQTL 7.63e-01 0.028 0.0929 0.362 CD16_Mono LOneK1K
ENSG00000162433 AK4 -961088 sc-eQTL 2.76e-01 -0.0897 0.0821 0.362 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -881293 sc-eQTL 3.65e-01 0.0502 0.0553 0.362 CD16_Mono LOneK1K
ENSG00000079739 PGM1 593050 sc-eQTL 3.70e-01 -0.0644 0.0718 0.362 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 818886 sc-eQTL 9.23e-01 -0.00834 0.0863 0.362 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 592740 sc-eQTL 5.08e-01 0.0606 0.0914 0.362 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -881293 sc-eQTL 5.12e-01 -0.0285 0.0434 0.362 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 663089 sc-eQTL 6.40e-01 -0.0474 0.101 0.362 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116652 DLEU2L 639379 eQTL 0.00825 0.0688 0.026 0.00225 0.0 0.371
ENSG00000185483 ROR1 412444 pQTL 1.31e-08 -0.0783 0.0137 0.0 0.0 0.369

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina