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Genes within 1Mb (chr1:64149014:G:GA):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 555603 sc-eQTL 7.46e-01 0.0261 0.0808 0.545 B L1
ENSG00000088035 ALG6 781439 sc-eQTL 3.31e-02 -0.178 0.0828 0.545 B L1
ENSG00000142856 ITGB3BP 555293 sc-eQTL 9.75e-01 -0.00292 0.0926 0.545 B L1
ENSG00000162434 JAK1 -918740 sc-eQTL 2.91e-01 -0.0602 0.0568 0.545 B L1
ENSG00000203965 EFCAB7 625642 sc-eQTL 6.37e-01 0.0448 0.0948 0.545 B L1
ENSG00000079739 PGM1 555603 sc-eQTL 6.59e-01 -0.031 0.0702 0.545 CD4T L1
ENSG00000088035 ALG6 781439 sc-eQTL 2.16e-01 0.0959 0.0773 0.545 CD4T L1
ENSG00000142856 ITGB3BP 555293 sc-eQTL 9.62e-01 0.00431 0.09 0.545 CD4T L1
ENSG00000158966 CACHD1 -321115 sc-eQTL 2.25e-01 0.0651 0.0535 0.545 CD4T L1
ENSG00000162434 JAK1 -918740 sc-eQTL 1.87e-01 -0.0742 0.056 0.545 CD4T L1
ENSG00000203965 EFCAB7 625642 sc-eQTL 6.18e-02 0.15 0.0801 0.545 CD4T L1
ENSG00000079739 PGM1 555603 sc-eQTL 2.33e-02 -0.174 0.0762 0.545 CD8T L1
ENSG00000088035 ALG6 781439 sc-eQTL 1.17e-01 0.133 0.0845 0.545 CD8T L1
ENSG00000142856 ITGB3BP 555293 sc-eQTL 2.64e-01 0.102 0.0913 0.545 CD8T L1
ENSG00000158966 CACHD1 -321115 sc-eQTL 2.99e-01 0.0481 0.0462 0.545 CD8T L1
ENSG00000162434 JAK1 -918740 sc-eQTL 9.89e-02 -0.12 0.0725 0.545 CD8T L1
ENSG00000203965 EFCAB7 625642 sc-eQTL 6.78e-01 0.0379 0.0912 0.545 CD8T L1
ENSG00000079739 PGM1 555603 sc-eQTL 1.87e-01 -0.116 0.0878 0.545 DC L1
ENSG00000088035 ALG6 781439 sc-eQTL 5.96e-01 0.0483 0.0909 0.545 DC L1
ENSG00000142856 ITGB3BP 555293 sc-eQTL 8.63e-01 0.0176 0.102 0.545 DC L1
ENSG00000162433 AK4 -998535 sc-eQTL 4.43e-01 0.062 0.0806 0.545 DC L1
ENSG00000162434 JAK1 -918740 sc-eQTL 3.58e-01 -0.0618 0.067 0.545 DC L1
ENSG00000162437 RAVER2 -596081 sc-eQTL 9.06e-01 -0.0102 0.0861 0.545 DC L1
ENSG00000203965 EFCAB7 625642 sc-eQTL 6.02e-01 0.0463 0.0887 0.545 DC L1
ENSG00000079739 PGM1 555603 sc-eQTL 6.35e-01 0.0399 0.084 0.545 Mono L1
ENSG00000088035 ALG6 781439 sc-eQTL 7.26e-01 0.0308 0.0877 0.545 Mono L1
ENSG00000142856 ITGB3BP 555293 sc-eQTL 6.63e-01 -0.0396 0.0906 0.545 Mono L1
ENSG00000162433 AK4 -998535 sc-eQTL 8.47e-01 0.0165 0.0854 0.545 Mono L1
ENSG00000162434 JAK1 -918740 sc-eQTL 4.72e-01 -0.0439 0.0609 0.545 Mono L1
ENSG00000079739 PGM1 555603 sc-eQTL 3.70e-01 0.0651 0.0725 0.545 NK L1
ENSG00000088035 ALG6 781439 sc-eQTL 7.16e-01 -0.031 0.0851 0.545 NK L1
ENSG00000142856 ITGB3BP 555293 sc-eQTL 5.43e-01 -0.0569 0.0935 0.545 NK L1
ENSG00000162434 JAK1 -918740 sc-eQTL 4.39e-02 -0.0875 0.0432 0.545 NK L1
ENSG00000203965 EFCAB7 625642 sc-eQTL 3.82e-01 -0.0888 0.101 0.545 NK L1
ENSG00000079739 PGM1 555603 sc-eQTL 4.31e-01 -0.0652 0.0826 0.545 Other_T L1
ENSG00000088035 ALG6 781439 sc-eQTL 6.82e-01 -0.0341 0.0831 0.545 Other_T L1
ENSG00000142856 ITGB3BP 555293 sc-eQTL 4.09e-02 0.133 0.0645 0.545 Other_T L1
ENSG00000162434 JAK1 -918740 sc-eQTL 6.92e-01 -0.025 0.0631 0.545 Other_T L1
ENSG00000162437 RAVER2 -596081 sc-eQTL 2.23e-01 0.112 0.0914 0.545 Other_T L1
ENSG00000203965 EFCAB7 625642 sc-eQTL 4.24e-01 -0.0804 0.1 0.545 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 555603 sc-eQTL 6.85e-01 0.0455 0.112 0.543 B_Activated L2
ENSG00000088035 ALG6 781439 sc-eQTL 2.27e-01 -0.129 0.107 0.543 B_Activated L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 2.92e-01 -0.108 0.102 0.543 B_Activated L2
ENSG00000162434 JAK1 -918740 sc-eQTL 2.65e-01 -0.114 0.102 0.543 B_Activated L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 5.06e-01 0.0647 0.0969 0.543 B_Activated L2
ENSG00000079739 PGM1 555603 sc-eQTL 7.03e-01 -0.0368 0.0965 0.547 B_Intermediate L2
ENSG00000088035 ALG6 781439 sc-eQTL 5.57e-02 -0.187 0.0972 0.547 B_Intermediate L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 6.48e-01 0.0431 0.0944 0.547 B_Intermediate L2
ENSG00000162434 JAK1 -918740 sc-eQTL 3.93e-02 -0.167 0.0807 0.547 B_Intermediate L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 1.54e-01 0.133 0.0931 0.547 B_Intermediate L2
ENSG00000079739 PGM1 555603 sc-eQTL 2.96e-01 -0.0992 0.0947 0.545 B_Memory L2
ENSG00000088035 ALG6 781439 sc-eQTL 8.84e-01 0.0141 0.0966 0.545 B_Memory L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 3.32e-01 -0.0956 0.0983 0.545 B_Memory L2
ENSG00000162434 JAK1 -918740 sc-eQTL 2.82e-01 -0.0881 0.0816 0.545 B_Memory L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 9.50e-01 -0.00617 0.0978 0.545 B_Memory L2
ENSG00000079739 PGM1 555603 sc-eQTL 4.57e-01 0.0706 0.0948 0.545 B_Naive1 L2
ENSG00000088035 ALG6 781439 sc-eQTL 4.23e-01 -0.0764 0.0951 0.545 B_Naive1 L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 2.20e-01 -0.114 0.093 0.545 B_Naive1 L2
ENSG00000162434 JAK1 -918740 sc-eQTL 4.64e-01 -0.0529 0.0721 0.545 B_Naive1 L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 9.16e-01 0.0105 0.0995 0.545 B_Naive1 L2
ENSG00000079739 PGM1 555603 sc-eQTL 7.14e-01 -0.035 0.0955 0.547 B_Naive2 L2
ENSG00000088035 ALG6 781439 sc-eQTL 1.47e-01 -0.144 0.0991 0.547 B_Naive2 L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 6.79e-02 0.182 0.0991 0.547 B_Naive2 L2
ENSG00000162434 JAK1 -918740 sc-eQTL 9.33e-01 0.00656 0.0775 0.547 B_Naive2 L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 6.19e-01 -0.0495 0.0994 0.547 B_Naive2 L2
ENSG00000079739 PGM1 555603 sc-eQTL 9.76e-01 -0.00297 0.0986 0.545 CD4_CTL L2
ENSG00000088035 ALG6 781439 sc-eQTL 7.03e-01 -0.0397 0.104 0.545 CD4_CTL L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 4.14e-01 -0.0824 0.101 0.545 CD4_CTL L2
ENSG00000158966 CACHD1 -321115 sc-eQTL 3.09e-01 -0.0372 0.0365 0.545 CD4_CTL L2
ENSG00000162434 JAK1 -918740 sc-eQTL 8.39e-02 -0.156 0.0897 0.545 CD4_CTL L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 9.99e-01 -0.000115 0.0958 0.545 CD4_CTL L2
ENSG00000079739 PGM1 555603 sc-eQTL 9.96e-01 -0.000422 0.0781 0.545 CD4_Naive L2
ENSG00000088035 ALG6 781439 sc-eQTL 7.90e-01 0.0226 0.0848 0.545 CD4_Naive L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 8.52e-01 -0.0168 0.09 0.545 CD4_Naive L2
ENSG00000158966 CACHD1 -321115 sc-eQTL 3.73e-01 0.0476 0.0532 0.545 CD4_Naive L2
ENSG00000162434 JAK1 -918740 sc-eQTL 8.97e-02 -0.0922 0.0541 0.545 CD4_Naive L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 1.02e-02 0.228 0.088 0.545 CD4_Naive L2
ENSG00000079739 PGM1 555603 sc-eQTL 9.42e-01 -0.00607 0.0829 0.545 CD4_TCM L2
ENSG00000088035 ALG6 781439 sc-eQTL 6.12e-01 0.0488 0.0962 0.545 CD4_TCM L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 2.50e-01 0.113 0.0976 0.545 CD4_TCM L2
ENSG00000158966 CACHD1 -321115 sc-eQTL 9.89e-01 0.00103 0.0776 0.545 CD4_TCM L2
ENSG00000162434 JAK1 -918740 sc-eQTL 8.60e-01 0.0112 0.0635 0.545 CD4_TCM L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 2.07e-01 -0.119 0.0944 0.545 CD4_TCM L2
ENSG00000079739 PGM1 555603 sc-eQTL 9.44e-01 -0.0069 0.0978 0.545 CD4_TEM L2
ENSG00000088035 ALG6 781439 sc-eQTL 5.32e-03 0.272 0.0965 0.545 CD4_TEM L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 9.60e-01 0.0048 0.0961 0.545 CD4_TEM L2
ENSG00000158966 CACHD1 -321115 sc-eQTL 4.17e-01 -0.0482 0.0593 0.545 CD4_TEM L2
ENSG00000162434 JAK1 -918740 sc-eQTL 3.31e-01 -0.0822 0.0843 0.545 CD4_TEM L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 5.56e-01 0.0587 0.0994 0.545 CD4_TEM L2
ENSG00000079739 PGM1 555603 sc-eQTL 3.24e-01 -0.086 0.0869 0.545 CD8_CTL L2
ENSG00000088035 ALG6 781439 sc-eQTL 2.20e-02 0.211 0.0915 0.545 CD8_CTL L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 9.83e-01 0.00207 0.0973 0.545 CD8_CTL L2
ENSG00000158966 CACHD1 -321115 sc-eQTL 9.23e-01 0.004 0.0412 0.545 CD8_CTL L2
ENSG00000162434 JAK1 -918740 sc-eQTL 3.11e-01 -0.0781 0.0768 0.545 CD8_CTL L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 2.87e-01 0.106 0.0994 0.545 CD8_CTL L2
ENSG00000079739 PGM1 555603 sc-eQTL 4.29e-01 -0.07 0.0883 0.545 CD8_Naive L2
ENSG00000088035 ALG6 781439 sc-eQTL 5.07e-01 -0.0608 0.0914 0.545 CD8_Naive L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 9.05e-01 0.011 0.092 0.545 CD8_Naive L2
ENSG00000158966 CACHD1 -321115 sc-eQTL 3.63e-01 0.058 0.0636 0.545 CD8_Naive L2
ENSG00000162434 JAK1 -918740 sc-eQTL 1.50e-01 -0.11 0.0763 0.545 CD8_Naive L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 4.07e-01 -0.0719 0.0866 0.545 CD8_Naive L2
ENSG00000079739 PGM1 555603 sc-eQTL 5.75e-01 -0.0559 0.0997 0.539 CD8_TCM L2
ENSG00000088035 ALG6 781439 sc-eQTL 2.37e-01 0.119 0.101 0.539 CD8_TCM L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 2.15e-01 0.121 0.0976 0.539 CD8_TCM L2
ENSG00000158966 CACHD1 -321115 sc-eQTL 6.89e-01 0.0206 0.0514 0.539 CD8_TCM L2
ENSG00000162434 JAK1 -918740 sc-eQTL 5.57e-01 -0.0486 0.0827 0.539 CD8_TCM L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 4.54e-01 0.0748 0.0997 0.539 CD8_TCM L2
ENSG00000079739 PGM1 555603 sc-eQTL 2.52e-01 -0.115 0.0998 0.55 CD8_TEM L2
ENSG00000088035 ALG6 781439 sc-eQTL 3.37e-01 0.0964 0.1 0.55 CD8_TEM L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 3.66e-01 0.0918 0.101 0.55 CD8_TEM L2
ENSG00000158966 CACHD1 -321115 sc-eQTL 9.79e-01 -0.000548 0.0207 0.55 CD8_TEM L2
ENSG00000162434 JAK1 -918740 sc-eQTL 2.73e-01 -0.107 0.0973 0.55 CD8_TEM L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 8.14e-01 0.0232 0.0983 0.55 CD8_TEM L2
ENSG00000079739 PGM1 555603 sc-eQTL 4.53e-01 -0.0704 0.0935 0.543 MAIT L2
ENSG00000088035 ALG6 781439 sc-eQTL 2.72e-01 -0.102 0.0924 0.543 MAIT L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 6.34e-01 0.0447 0.0938 0.543 MAIT L2
ENSG00000162434 JAK1 -918740 sc-eQTL 6.41e-01 0.0395 0.0847 0.543 MAIT L2
ENSG00000162437 RAVER2 -596081 sc-eQTL 2.04e-01 0.115 0.0899 0.543 MAIT L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 6.13e-01 -0.0489 0.0965 0.543 MAIT L2
ENSG00000079739 PGM1 555603 sc-eQTL 5.49e-01 -0.0567 0.0945 0.54 NK_CD56bright L2
ENSG00000088035 ALG6 781439 sc-eQTL 8.39e-02 -0.167 0.0962 0.54 NK_CD56bright L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 1.88e-01 -0.128 0.0973 0.54 NK_CD56bright L2
ENSG00000162434 JAK1 -918740 sc-eQTL 1.69e-01 -0.0846 0.0613 0.54 NK_CD56bright L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 4.27e-02 -0.195 0.0954 0.54 NK_CD56bright L2
ENSG00000079739 PGM1 555603 sc-eQTL 1.65e-01 0.104 0.0745 0.545 NK_CD56dim L2
ENSG00000088035 ALG6 781439 sc-eQTL 7.28e-01 -0.033 0.0949 0.545 NK_CD56dim L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 6.99e-01 -0.037 0.0954 0.545 NK_CD56dim L2
ENSG00000162434 JAK1 -918740 sc-eQTL 3.83e-01 -0.044 0.0503 0.545 NK_CD56dim L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 7.76e-01 0.0294 0.103 0.545 NK_CD56dim L2
ENSG00000079739 PGM1 555603 sc-eQTL 8.84e-01 -0.0147 0.101 0.546 NK_HLA L2
ENSG00000088035 ALG6 781439 sc-eQTL 7.12e-01 -0.0388 0.105 0.546 NK_HLA L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 7.05e-01 -0.0372 0.098 0.546 NK_HLA L2
ENSG00000162434 JAK1 -918740 sc-eQTL 2.93e-01 -0.0689 0.0654 0.546 NK_HLA L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 2.50e-01 -0.107 0.0931 0.546 NK_HLA L2
ENSG00000079739 PGM1 555603 sc-eQTL 6.38e-01 0.0383 0.0811 0.545 NK_cytokine L2
ENSG00000088035 ALG6 781439 sc-eQTL 2.42e-01 0.107 0.0914 0.545 NK_cytokine L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 3.73e-01 -0.0801 0.0898 0.545 NK_cytokine L2
ENSG00000162434 JAK1 -918740 sc-eQTL 2.97e-02 -0.116 0.053 0.545 NK_cytokine L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 9.32e-01 0.00819 0.0959 0.545 NK_cytokine L2
ENSG00000079739 PGM1 555603 sc-eQTL 9.88e-01 -0.00165 0.108 0.53 PB L2
ENSG00000088035 ALG6 781439 sc-eQTL 7.07e-01 0.0428 0.114 0.53 PB L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 4.41e-01 0.0815 0.105 0.53 PB L2
ENSG00000162434 JAK1 -918740 sc-eQTL 6.98e-01 -0.031 0.0797 0.53 PB L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 8.54e-01 0.0215 0.116 0.53 PB L2
ENSG00000079739 PGM1 555603 sc-eQTL 3.31e-01 -0.0883 0.0906 0.537 Pro_T L2
ENSG00000088035 ALG6 781439 sc-eQTL 6.63e-02 0.169 0.0917 0.537 Pro_T L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 1.82e-01 0.109 0.0811 0.537 Pro_T L2
ENSG00000162434 JAK1 -918740 sc-eQTL 3.20e-01 -0.0639 0.0641 0.537 Pro_T L2
ENSG00000162437 RAVER2 -596081 sc-eQTL 4.21e-01 0.0682 0.0846 0.537 Pro_T L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 7.28e-01 0.033 0.0946 0.537 Pro_T L2
ENSG00000079739 PGM1 555603 sc-eQTL 1.25e-01 -0.141 0.0912 0.545 Treg L2
ENSG00000088035 ALG6 781439 sc-eQTL 9.51e-01 -0.00605 0.098 0.545 Treg L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 5.19e-01 -0.0621 0.0961 0.545 Treg L2
ENSG00000158966 CACHD1 -321115 sc-eQTL 2.35e-01 0.0862 0.0724 0.545 Treg L2
ENSG00000162434 JAK1 -918740 sc-eQTL 9.62e-01 0.00366 0.0775 0.545 Treg L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 3.41e-01 -0.0877 0.0918 0.545 Treg L2
ENSG00000079739 PGM1 555603 sc-eQTL 3.49e-01 -0.0903 0.0962 0.549 cDC L2
ENSG00000088035 ALG6 781439 sc-eQTL 3.18e-01 -0.0976 0.0975 0.549 cDC L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 3.42e-01 0.1 0.105 0.549 cDC L2
ENSG00000162433 AK4 -998535 sc-eQTL 2.60e-01 0.0994 0.0879 0.549 cDC L2
ENSG00000162434 JAK1 -918740 sc-eQTL 1.73e-02 -0.195 0.081 0.549 cDC L2
ENSG00000162437 RAVER2 -596081 sc-eQTL 5.69e-01 0.0516 0.0904 0.549 cDC L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 4.96e-01 -0.0577 0.0847 0.549 cDC L2
ENSG00000079739 PGM1 555603 sc-eQTL 4.27e-01 0.0694 0.0872 0.545 cMono_IL1B L2
ENSG00000088035 ALG6 781439 sc-eQTL 2.61e-01 0.0983 0.0872 0.545 cMono_IL1B L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 3.79e-01 -0.0808 0.0917 0.545 cMono_IL1B L2
ENSG00000162433 AK4 -998535 sc-eQTL 7.51e-01 -0.0274 0.0864 0.545 cMono_IL1B L2
ENSG00000162434 JAK1 -918740 sc-eQTL 9.17e-02 -0.132 0.078 0.545 cMono_IL1B L2
ENSG00000079739 PGM1 555603 sc-eQTL 6.20e-01 0.0482 0.0972 0.545 cMono_S100A L2
ENSG00000088035 ALG6 781439 sc-eQTL 6.67e-02 -0.18 0.0978 0.545 cMono_S100A L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 6.28e-01 -0.0433 0.0892 0.545 cMono_S100A L2
ENSG00000162433 AK4 -998535 sc-eQTL 2.84e-01 0.0944 0.0879 0.545 cMono_S100A L2
ENSG00000162434 JAK1 -918740 sc-eQTL 9.19e-01 -0.00824 0.0813 0.545 cMono_S100A L2
ENSG00000079739 PGM1 555603 sc-eQTL 2.73e-01 -0.117 0.107 0.536 gdT L2
ENSG00000088035 ALG6 781439 sc-eQTL 7.87e-01 0.031 0.114 0.536 gdT L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 2.11e-02 0.26 0.112 0.536 gdT L2
ENSG00000162434 JAK1 -918740 sc-eQTL 3.91e-02 -0.234 0.113 0.536 gdT L2
ENSG00000162437 RAVER2 -596081 sc-eQTL 1.54e-01 0.143 0.0999 0.536 gdT L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 2.96e-01 0.117 0.111 0.536 gdT L2
ENSG00000079739 PGM1 555603 sc-eQTL 2.56e-02 -0.215 0.0958 0.542 intMono L2
ENSG00000088035 ALG6 781439 sc-eQTL 1.17e-01 0.141 0.0898 0.542 intMono L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 7.30e-01 -0.0335 0.097 0.542 intMono L2
ENSG00000162433 AK4 -998535 sc-eQTL 5.44e-01 0.052 0.0856 0.542 intMono L2
ENSG00000162434 JAK1 -918740 sc-eQTL 7.74e-01 -0.0228 0.0792 0.542 intMono L2
ENSG00000079739 PGM1 555603 sc-eQTL 4.24e-01 0.0709 0.0884 0.548 ncMono L2
ENSG00000088035 ALG6 781439 sc-eQTL 6.63e-01 -0.0424 0.0972 0.548 ncMono L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 3.23e-01 0.0924 0.0933 0.548 ncMono L2
ENSG00000162433 AK4 -998535 sc-eQTL 2.52e-01 -0.0933 0.0813 0.548 ncMono L2
ENSG00000162434 JAK1 -918740 sc-eQTL 8.20e-01 -0.015 0.066 0.548 ncMono L2
ENSG00000079739 PGM1 555603 sc-eQTL 7.73e-01 -0.03 0.104 0.542 pDC L2
ENSG00000088035 ALG6 781439 sc-eQTL 8.07e-01 0.0247 0.101 0.542 pDC L2
ENSG00000142856 ITGB3BP 555293 sc-eQTL 7.22e-02 -0.186 0.103 0.542 pDC L2
ENSG00000162433 AK4 -998535 sc-eQTL 6.01e-01 -0.0328 0.0627 0.542 pDC L2
ENSG00000162434 JAK1 -918740 sc-eQTL 5.49e-01 0.0503 0.0837 0.542 pDC L2
ENSG00000162437 RAVER2 -596081 sc-eQTL 9.39e-01 0.00726 0.0944 0.542 pDC L2
ENSG00000203965 EFCAB7 625642 sc-eQTL 9.78e-01 -0.00253 0.0921 0.542 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 555603 sc-eQTL 3.17e-01 -0.0899 0.0898 0.545 B_Memory LOneK1K
ENSG00000088035 ALG6 781439 sc-eQTL 9.13e-02 -0.168 0.0988 0.545 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 555293 sc-eQTL 3.98e-01 -0.0775 0.0916 0.545 B_Memory LOneK1K
ENSG00000162434 JAK1 -918740 sc-eQTL 4.92e-02 -0.142 0.0717 0.545 B_Memory LOneK1K
ENSG00000203965 EFCAB7 625642 sc-eQTL 1.26e-01 0.146 0.095 0.545 B_Memory LOneK1K
ENSG00000079739 PGM1 555603 sc-eQTL 9.22e-01 0.0091 0.0929 0.545 B_Naive LOneK1K
ENSG00000088035 ALG6 781439 sc-eQTL 1.38e-01 -0.142 0.0952 0.545 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 555293 sc-eQTL 8.98e-01 0.0124 0.0964 0.545 B_Naive LOneK1K
ENSG00000162434 JAK1 -918740 sc-eQTL 5.28e-01 -0.0442 0.0698 0.545 B_Naive LOneK1K
ENSG00000203965 EFCAB7 625642 sc-eQTL 8.75e-01 0.0152 0.0969 0.545 B_Naive LOneK1K
ENSG00000079739 PGM1 555603 sc-eQTL 2.65e-01 0.1 0.0896 0.545 CD14_Mono LOneK1K
ENSG00000088035 ALG6 781439 sc-eQTL 9.77e-01 0.00257 0.087 0.545 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 555293 sc-eQTL 2.89e-01 -0.0951 0.0894 0.545 CD14_Mono LOneK1K
ENSG00000162433 AK4 -998535 sc-eQTL 8.11e-01 0.0212 0.0885 0.545 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -918740 sc-eQTL 2.18e-01 -0.0912 0.0738 0.545 CD14_Mono LOneK1K
ENSG00000079739 PGM1 555603 sc-eQTL 2.95e-01 -0.0895 0.0852 0.545 CD16_Mono LOneK1K
ENSG00000088035 ALG6 781439 sc-eQTL 3.94e-01 0.0826 0.0968 0.545 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 555293 sc-eQTL 4.60e-01 0.0702 0.0948 0.545 CD16_Mono LOneK1K
ENSG00000162433 AK4 -998535 sc-eQTL 9.89e-01 -0.00111 0.0841 0.545 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -918740 sc-eQTL 6.19e-01 -0.0281 0.0566 0.545 CD16_Mono LOneK1K
ENSG00000079739 PGM1 555603 sc-eQTL 2.95e-01 0.0767 0.0731 0.545 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 781439 sc-eQTL 8.72e-01 0.0141 0.088 0.545 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 555293 sc-eQTL 7.90e-01 -0.0249 0.0932 0.545 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -918740 sc-eQTL 9.96e-02 -0.0727 0.044 0.545 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 625642 sc-eQTL 7.19e-01 -0.0371 0.103 0.545 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000185483 ROR1 374997 pQTL 1.44e-16 -0.108 0.013 0.0594 0.123 0.434
ENSG00000230798 FOXD3-AS1 824573 eQTL 0.0106 0.066 0.0258 0.0 0.0 0.437

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina