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Genes within 1Mb (chr1:64148328:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 554917 sc-eQTL 7.43e-01 0.0266 0.0811 0.547 B L1
ENSG00000088035 ALG6 780753 sc-eQTL 1.92e-02 -0.196 0.083 0.547 B L1
ENSG00000142856 ITGB3BP 554607 sc-eQTL 8.70e-01 0.0152 0.093 0.547 B L1
ENSG00000162434 JAK1 -919426 sc-eQTL 2.76e-01 -0.0623 0.0571 0.547 B L1
ENSG00000203965 EFCAB7 624956 sc-eQTL 4.46e-01 0.0726 0.0951 0.547 B L1
ENSG00000079739 PGM1 554917 sc-eQTL 6.22e-01 -0.0348 0.0705 0.547 CD4T L1
ENSG00000088035 ALG6 780753 sc-eQTL 1.25e-01 0.119 0.0775 0.547 CD4T L1
ENSG00000142856 ITGB3BP 554607 sc-eQTL 9.26e-01 0.0084 0.0904 0.547 CD4T L1
ENSG00000158966 CACHD1 -321801 sc-eQTL 2.57e-01 0.0611 0.0538 0.547 CD4T L1
ENSG00000162434 JAK1 -919426 sc-eQTL 1.43e-01 -0.0827 0.0562 0.547 CD4T L1
ENSG00000203965 EFCAB7 624956 sc-eQTL 2.16e-02 0.186 0.0801 0.547 CD4T L1
ENSG00000079739 PGM1 554917 sc-eQTL 2.90e-02 -0.168 0.0765 0.547 CD8T L1
ENSG00000088035 ALG6 780753 sc-eQTL 5.86e-02 0.161 0.0846 0.547 CD8T L1
ENSG00000142856 ITGB3BP 554607 sc-eQTL 2.10e-01 0.115 0.0915 0.547 CD8T L1
ENSG00000158966 CACHD1 -321801 sc-eQTL 3.10e-01 0.0472 0.0463 0.547 CD8T L1
ENSG00000162434 JAK1 -919426 sc-eQTL 1.24e-01 -0.112 0.0728 0.547 CD8T L1
ENSG00000203965 EFCAB7 624956 sc-eQTL 7.49e-01 0.0294 0.0915 0.547 CD8T L1
ENSG00000079739 PGM1 554917 sc-eQTL 1.21e-01 -0.137 0.0877 0.547 DC L1
ENSG00000088035 ALG6 780753 sc-eQTL 8.51e-01 0.0171 0.0911 0.547 DC L1
ENSG00000142856 ITGB3BP 554607 sc-eQTL 7.26e-01 0.0359 0.102 0.547 DC L1
ENSG00000162433 AK4 -999221 sc-eQTL 4.88e-01 0.0561 0.0808 0.547 DC L1
ENSG00000162434 JAK1 -919426 sc-eQTL 3.72e-01 -0.06 0.0671 0.547 DC L1
ENSG00000162437 RAVER2 -596767 sc-eQTL 9.21e-01 -0.00851 0.0862 0.547 DC L1
ENSG00000203965 EFCAB7 624956 sc-eQTL 4.37e-01 0.0691 0.0887 0.547 DC L1
ENSG00000079739 PGM1 554917 sc-eQTL 4.71e-01 0.0609 0.0843 0.547 Mono L1
ENSG00000088035 ALG6 780753 sc-eQTL 7.23e-01 0.0312 0.088 0.547 Mono L1
ENSG00000142856 ITGB3BP 554607 sc-eQTL 6.86e-01 -0.0368 0.0909 0.547 Mono L1
ENSG00000162433 AK4 -999221 sc-eQTL 9.38e-01 0.00665 0.0858 0.547 Mono L1
ENSG00000162434 JAK1 -919426 sc-eQTL 6.08e-01 -0.0314 0.0611 0.547 Mono L1
ENSG00000079739 PGM1 554917 sc-eQTL 2.47e-01 0.0842 0.0725 0.547 NK L1
ENSG00000088035 ALG6 780753 sc-eQTL 6.41e-01 -0.0398 0.0852 0.547 NK L1
ENSG00000142856 ITGB3BP 554607 sc-eQTL 7.18e-01 -0.0339 0.0937 0.547 NK L1
ENSG00000162434 JAK1 -919426 sc-eQTL 4.12e-02 -0.0888 0.0432 0.547 NK L1
ENSG00000203965 EFCAB7 624956 sc-eQTL 3.92e-01 -0.0871 0.102 0.547 NK L1
ENSG00000079739 PGM1 554917 sc-eQTL 3.82e-01 -0.0727 0.0829 0.547 Other_T L1
ENSG00000088035 ALG6 780753 sc-eQTL 6.80e-01 -0.0345 0.0834 0.547 Other_T L1
ENSG00000142856 ITGB3BP 554607 sc-eQTL 3.69e-02 0.136 0.0647 0.547 Other_T L1
ENSG00000162434 JAK1 -919426 sc-eQTL 5.40e-01 -0.0389 0.0633 0.547 Other_T L1
ENSG00000162437 RAVER2 -596767 sc-eQTL 1.84e-01 0.122 0.0917 0.547 Other_T L1
ENSG00000203965 EFCAB7 624956 sc-eQTL 3.00e-01 -0.105 0.101 0.547 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 554917 sc-eQTL 6.83e-01 0.0459 0.112 0.546 B_Activated L2
ENSG00000088035 ALG6 780753 sc-eQTL 2.11e-01 -0.134 0.107 0.546 B_Activated L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 3.79e-01 -0.0905 0.103 0.546 B_Activated L2
ENSG00000162434 JAK1 -919426 sc-eQTL 3.22e-01 -0.102 0.102 0.546 B_Activated L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 3.39e-01 0.0931 0.0971 0.546 B_Activated L2
ENSG00000079739 PGM1 554917 sc-eQTL 7.40e-01 -0.0323 0.097 0.549 B_Intermediate L2
ENSG00000088035 ALG6 780753 sc-eQTL 3.63e-02 -0.206 0.0975 0.549 B_Intermediate L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 4.66e-01 0.0692 0.0948 0.549 B_Intermediate L2
ENSG00000162434 JAK1 -919426 sc-eQTL 3.58e-02 -0.171 0.0811 0.549 B_Intermediate L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 1.75e-01 0.127 0.0936 0.549 B_Intermediate L2
ENSG00000079739 PGM1 554917 sc-eQTL 2.70e-01 -0.105 0.0952 0.547 B_Memory L2
ENSG00000088035 ALG6 780753 sc-eQTL 9.53e-01 0.00575 0.0971 0.547 B_Memory L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 3.33e-01 -0.096 0.0988 0.547 B_Memory L2
ENSG00000162434 JAK1 -919426 sc-eQTL 3.78e-01 -0.0726 0.0821 0.547 B_Memory L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 9.02e-01 -0.0122 0.0983 0.547 B_Memory L2
ENSG00000079739 PGM1 554917 sc-eQTL 4.07e-01 0.079 0.0951 0.547 B_Naive1 L2
ENSG00000088035 ALG6 780753 sc-eQTL 3.64e-01 -0.0869 0.0955 0.547 B_Naive1 L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 2.69e-01 -0.104 0.0934 0.547 B_Naive1 L2
ENSG00000162434 JAK1 -919426 sc-eQTL 4.03e-01 -0.0606 0.0723 0.547 B_Naive1 L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 6.96e-01 0.039 0.0999 0.547 B_Naive1 L2
ENSG00000079739 PGM1 554917 sc-eQTL 7.28e-01 -0.0333 0.0958 0.549 B_Naive2 L2
ENSG00000088035 ALG6 780753 sc-eQTL 1.74e-01 -0.136 0.0995 0.549 B_Naive2 L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 3.86e-02 0.207 0.0993 0.549 B_Naive2 L2
ENSG00000162434 JAK1 -919426 sc-eQTL 9.88e-01 -0.00118 0.0778 0.549 B_Naive2 L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 6.55e-01 -0.0446 0.0998 0.549 B_Naive2 L2
ENSG00000079739 PGM1 554917 sc-eQTL 8.05e-01 0.0245 0.0988 0.548 CD4_CTL L2
ENSG00000088035 ALG6 780753 sc-eQTL 5.85e-01 -0.057 0.104 0.548 CD4_CTL L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 4.58e-01 -0.075 0.101 0.548 CD4_CTL L2
ENSG00000158966 CACHD1 -321801 sc-eQTL 2.86e-01 -0.0392 0.0366 0.548 CD4_CTL L2
ENSG00000162434 JAK1 -919426 sc-eQTL 1.30e-01 -0.137 0.0901 0.548 CD4_CTL L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 9.07e-01 0.0112 0.096 0.548 CD4_CTL L2
ENSG00000079739 PGM1 554917 sc-eQTL 9.20e-01 -0.0079 0.0785 0.547 CD4_Naive L2
ENSG00000088035 ALG6 780753 sc-eQTL 4.74e-01 0.061 0.0851 0.547 CD4_Naive L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 8.77e-01 -0.014 0.0905 0.547 CD4_Naive L2
ENSG00000158966 CACHD1 -321801 sc-eQTL 4.10e-01 0.0442 0.0535 0.547 CD4_Naive L2
ENSG00000162434 JAK1 -919426 sc-eQTL 1.07e-01 -0.0879 0.0544 0.547 CD4_Naive L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 3.09e-03 0.263 0.088 0.547 CD4_Naive L2
ENSG00000079739 PGM1 554917 sc-eQTL 9.30e-01 -0.00726 0.0831 0.547 CD4_TCM L2
ENSG00000088035 ALG6 780753 sc-eQTL 6.48e-01 0.044 0.0965 0.547 CD4_TCM L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 2.04e-01 0.125 0.0978 0.547 CD4_TCM L2
ENSG00000158966 CACHD1 -321801 sc-eQTL 8.42e-01 -0.0155 0.0778 0.547 CD4_TCM L2
ENSG00000162434 JAK1 -919426 sc-eQTL 9.50e-01 -0.00398 0.0637 0.547 CD4_TCM L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 3.48e-01 -0.0891 0.0948 0.547 CD4_TCM L2
ENSG00000079739 PGM1 554917 sc-eQTL 9.26e-01 -0.00915 0.0981 0.547 CD4_TEM L2
ENSG00000088035 ALG6 780753 sc-eQTL 2.64e-03 0.294 0.0965 0.547 CD4_TEM L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 9.09e-01 0.011 0.0964 0.547 CD4_TEM L2
ENSG00000158966 CACHD1 -321801 sc-eQTL 3.81e-01 -0.0522 0.0595 0.547 CD4_TEM L2
ENSG00000162434 JAK1 -919426 sc-eQTL 3.15e-01 -0.0851 0.0846 0.547 CD4_TEM L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 5.05e-01 0.0666 0.0998 0.547 CD4_TEM L2
ENSG00000079739 PGM1 554917 sc-eQTL 3.91e-01 -0.0752 0.0874 0.547 CD8_CTL L2
ENSG00000088035 ALG6 780753 sc-eQTL 1.07e-02 0.236 0.0916 0.547 CD8_CTL L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 9.28e-01 0.0088 0.0977 0.547 CD8_CTL L2
ENSG00000158966 CACHD1 -321801 sc-eQTL 9.77e-01 -0.00121 0.0414 0.547 CD8_CTL L2
ENSG00000162434 JAK1 -919426 sc-eQTL 3.20e-01 -0.077 0.0772 0.547 CD8_CTL L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 2.68e-01 0.111 0.0998 0.547 CD8_CTL L2
ENSG00000079739 PGM1 554917 sc-eQTL 3.70e-01 -0.0798 0.0889 0.547 CD8_Naive L2
ENSG00000088035 ALG6 780753 sc-eQTL 5.51e-01 -0.0551 0.0921 0.547 CD8_Naive L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 7.89e-01 0.0248 0.0927 0.547 CD8_Naive L2
ENSG00000158966 CACHD1 -321801 sc-eQTL 3.80e-01 0.0564 0.0641 0.547 CD8_Naive L2
ENSG00000162434 JAK1 -919426 sc-eQTL 1.89e-01 -0.101 0.077 0.547 CD8_Naive L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 2.53e-01 -0.0999 0.0871 0.547 CD8_Naive L2
ENSG00000079739 PGM1 554917 sc-eQTL 5.72e-01 -0.0567 0.1 0.542 CD8_TCM L2
ENSG00000088035 ALG6 780753 sc-eQTL 2.35e-01 0.12 0.101 0.542 CD8_TCM L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 3.60e-01 0.0901 0.0981 0.542 CD8_TCM L2
ENSG00000158966 CACHD1 -321801 sc-eQTL 7.59e-01 0.0158 0.0516 0.542 CD8_TCM L2
ENSG00000162434 JAK1 -919426 sc-eQTL 4.62e-01 -0.0612 0.083 0.542 CD8_TCM L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 3.83e-01 0.0874 0.1 0.542 CD8_TCM L2
ENSG00000079739 PGM1 554917 sc-eQTL 2.38e-01 -0.119 0.1 0.553 CD8_TEM L2
ENSG00000088035 ALG6 780753 sc-eQTL 3.53e-01 0.0938 0.101 0.553 CD8_TEM L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 2.33e-01 0.122 0.102 0.553 CD8_TEM L2
ENSG00000158966 CACHD1 -321801 sc-eQTL 9.31e-01 -0.0018 0.0208 0.553 CD8_TEM L2
ENSG00000162434 JAK1 -919426 sc-eQTL 3.15e-01 -0.0986 0.0979 0.553 CD8_TEM L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 6.70e-01 0.0421 0.0988 0.553 CD8_TEM L2
ENSG00000079739 PGM1 554917 sc-eQTL 4.24e-01 -0.0757 0.0944 0.545 MAIT L2
ENSG00000088035 ALG6 780753 sc-eQTL 3.42e-01 -0.089 0.0934 0.545 MAIT L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 5.76e-01 0.053 0.0946 0.545 MAIT L2
ENSG00000162434 JAK1 -919426 sc-eQTL 6.01e-01 0.0448 0.0855 0.545 MAIT L2
ENSG00000162437 RAVER2 -596767 sc-eQTL 1.71e-01 0.125 0.0907 0.545 MAIT L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 4.71e-01 -0.0703 0.0974 0.545 MAIT L2
ENSG00000079739 PGM1 554917 sc-eQTL 5.29e-01 -0.0597 0.0948 0.542 NK_CD56bright L2
ENSG00000088035 ALG6 780753 sc-eQTL 1.23e-01 -0.15 0.0967 0.542 NK_CD56bright L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 2.14e-01 -0.122 0.0977 0.542 NK_CD56bright L2
ENSG00000162434 JAK1 -919426 sc-eQTL 9.97e-02 -0.102 0.0614 0.542 NK_CD56bright L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 4.71e-02 -0.191 0.0958 0.542 NK_CD56bright L2
ENSG00000079739 PGM1 554917 sc-eQTL 1.15e-01 0.118 0.0746 0.547 NK_CD56dim L2
ENSG00000088035 ALG6 780753 sc-eQTL 6.70e-01 -0.0406 0.0951 0.547 NK_CD56dim L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 9.82e-01 -0.00213 0.0957 0.547 NK_CD56dim L2
ENSG00000162434 JAK1 -919426 sc-eQTL 3.66e-01 -0.0457 0.0504 0.547 NK_CD56dim L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 7.48e-01 0.0333 0.103 0.547 NK_CD56dim L2
ENSG00000079739 PGM1 554917 sc-eQTL 8.96e-01 0.0132 0.102 0.548 NK_HLA L2
ENSG00000088035 ALG6 780753 sc-eQTL 6.24e-01 -0.0517 0.105 0.548 NK_HLA L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 6.37e-01 -0.0465 0.0983 0.548 NK_HLA L2
ENSG00000162434 JAK1 -919426 sc-eQTL 3.40e-01 -0.0627 0.0656 0.548 NK_HLA L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 2.69e-01 -0.103 0.0934 0.548 NK_HLA L2
ENSG00000079739 PGM1 554917 sc-eQTL 5.59e-01 0.0477 0.0816 0.547 NK_cytokine L2
ENSG00000088035 ALG6 780753 sc-eQTL 3.43e-01 0.0875 0.0921 0.547 NK_cytokine L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 3.78e-01 -0.0799 0.0904 0.547 NK_cytokine L2
ENSG00000162434 JAK1 -919426 sc-eQTL 3.79e-02 -0.111 0.0533 0.547 NK_cytokine L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 9.56e-01 0.00539 0.0965 0.547 NK_cytokine L2
ENSG00000079739 PGM1 554917 sc-eQTL 7.82e-01 0.0298 0.107 0.53 PB L2
ENSG00000088035 ALG6 780753 sc-eQTL 7.16e-01 0.0411 0.113 0.53 PB L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 4.45e-01 0.0802 0.105 0.53 PB L2
ENSG00000162434 JAK1 -919426 sc-eQTL 6.81e-01 -0.0327 0.0791 0.53 PB L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 7.89e-01 0.0309 0.115 0.53 PB L2
ENSG00000079739 PGM1 554917 sc-eQTL 3.29e-01 -0.0892 0.0911 0.539 Pro_T L2
ENSG00000088035 ALG6 780753 sc-eQTL 7.36e-02 0.166 0.0922 0.539 Pro_T L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 1.67e-01 0.113 0.0815 0.539 Pro_T L2
ENSG00000162434 JAK1 -919426 sc-eQTL 2.60e-01 -0.0727 0.0643 0.539 Pro_T L2
ENSG00000162437 RAVER2 -596767 sc-eQTL 3.32e-01 0.0826 0.085 0.539 Pro_T L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 8.46e-01 0.0185 0.0951 0.539 Pro_T L2
ENSG00000079739 PGM1 554917 sc-eQTL 1.14e-01 -0.145 0.0915 0.547 Treg L2
ENSG00000088035 ALG6 780753 sc-eQTL 7.12e-01 -0.0364 0.0984 0.547 Treg L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 3.43e-01 -0.0916 0.0964 0.547 Treg L2
ENSG00000158966 CACHD1 -321801 sc-eQTL 2.10e-01 0.0914 0.0728 0.547 Treg L2
ENSG00000162434 JAK1 -919426 sc-eQTL 9.27e-01 -0.00714 0.0778 0.547 Treg L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 3.50e-01 -0.0864 0.0923 0.547 Treg L2
ENSG00000079739 PGM1 554917 sc-eQTL 3.99e-01 -0.0822 0.0972 0.554 cDC L2
ENSG00000088035 ALG6 780753 sc-eQTL 2.02e-01 -0.126 0.0983 0.554 cDC L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 2.82e-01 0.115 0.106 0.554 cDC L2
ENSG00000162433 AK4 -999221 sc-eQTL 3.27e-01 0.0874 0.0888 0.554 cDC L2
ENSG00000162434 JAK1 -919426 sc-eQTL 2.25e-02 -0.189 0.082 0.554 cDC L2
ENSG00000162437 RAVER2 -596767 sc-eQTL 4.28e-01 0.0725 0.0912 0.554 cDC L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 4.27e-01 -0.0681 0.0856 0.554 cDC L2
ENSG00000079739 PGM1 554917 sc-eQTL 4.04e-01 0.0733 0.0876 0.547 cMono_IL1B L2
ENSG00000088035 ALG6 780753 sc-eQTL 2.00e-01 0.112 0.0874 0.547 cMono_IL1B L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 3.31e-01 -0.0897 0.092 0.547 cMono_IL1B L2
ENSG00000162433 AK4 -999221 sc-eQTL 7.24e-01 -0.0306 0.0867 0.547 cMono_IL1B L2
ENSG00000162434 JAK1 -919426 sc-eQTL 1.09e-01 -0.126 0.0784 0.547 cMono_IL1B L2
ENSG00000079739 PGM1 554917 sc-eQTL 4.02e-01 0.0817 0.0973 0.547 cMono_S100A L2
ENSG00000088035 ALG6 780753 sc-eQTL 6.92e-02 -0.179 0.098 0.547 cMono_S100A L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 7.54e-01 -0.0281 0.0895 0.547 cMono_S100A L2
ENSG00000162433 AK4 -999221 sc-eQTL 2.85e-01 0.0945 0.0882 0.547 cMono_S100A L2
ENSG00000162434 JAK1 -919426 sc-eQTL 8.85e-01 0.0118 0.0816 0.547 cMono_S100A L2
ENSG00000079739 PGM1 554917 sc-eQTL 2.02e-01 -0.139 0.108 0.542 gdT L2
ENSG00000088035 ALG6 780753 sc-eQTL 9.47e-01 0.00768 0.116 0.542 gdT L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 2.13e-02 0.264 0.114 0.542 gdT L2
ENSG00000162434 JAK1 -919426 sc-eQTL 2.09e-02 -0.267 0.114 0.542 gdT L2
ENSG00000162437 RAVER2 -596767 sc-eQTL 1.77e-01 0.138 0.102 0.542 gdT L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 3.25e-01 0.112 0.113 0.542 gdT L2
ENSG00000079739 PGM1 554917 sc-eQTL 5.46e-02 -0.187 0.0965 0.544 intMono L2
ENSG00000088035 ALG6 780753 sc-eQTL 1.25e-01 0.139 0.0902 0.544 intMono L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 7.53e-01 -0.0307 0.0974 0.544 intMono L2
ENSG00000162433 AK4 -999221 sc-eQTL 6.49e-01 0.0392 0.086 0.544 intMono L2
ENSG00000162434 JAK1 -919426 sc-eQTL 9.99e-01 -9.67e-05 0.0795 0.544 intMono L2
ENSG00000079739 PGM1 554917 sc-eQTL 3.34e-01 0.0859 0.0888 0.55 ncMono L2
ENSG00000088035 ALG6 780753 sc-eQTL 5.45e-01 -0.0592 0.0977 0.55 ncMono L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 3.48e-01 0.0882 0.0938 0.55 ncMono L2
ENSG00000162433 AK4 -999221 sc-eQTL 1.57e-01 -0.116 0.0816 0.55 ncMono L2
ENSG00000162434 JAK1 -919426 sc-eQTL 8.68e-01 -0.011 0.0663 0.55 ncMono L2
ENSG00000079739 PGM1 554917 sc-eQTL 7.38e-01 -0.0349 0.104 0.545 pDC L2
ENSG00000088035 ALG6 780753 sc-eQTL 9.81e-01 0.00241 0.102 0.545 pDC L2
ENSG00000142856 ITGB3BP 554607 sc-eQTL 1.38e-01 -0.155 0.104 0.545 pDC L2
ENSG00000162433 AK4 -999221 sc-eQTL 6.06e-01 -0.0325 0.063 0.545 pDC L2
ENSG00000162434 JAK1 -919426 sc-eQTL 5.32e-01 0.0527 0.0841 0.545 pDC L2
ENSG00000162437 RAVER2 -596767 sc-eQTL 7.96e-01 -0.0246 0.0948 0.545 pDC L2
ENSG00000203965 EFCAB7 624956 sc-eQTL 7.82e-01 0.0256 0.0925 0.545 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 554917 sc-eQTL 2.93e-01 -0.095 0.0901 0.547 B_Memory LOneK1K
ENSG00000088035 ALG6 780753 sc-eQTL 5.68e-02 -0.19 0.099 0.547 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 554607 sc-eQTL 4.99e-01 -0.0623 0.092 0.547 B_Memory LOneK1K
ENSG00000162434 JAK1 -919426 sc-eQTL 6.75e-02 -0.133 0.0721 0.547 B_Memory LOneK1K
ENSG00000203965 EFCAB7 624956 sc-eQTL 1.22e-01 0.148 0.0954 0.547 B_Memory LOneK1K
ENSG00000079739 PGM1 554917 sc-eQTL 8.80e-01 0.0141 0.0933 0.547 B_Naive LOneK1K
ENSG00000088035 ALG6 780753 sc-eQTL 1.25e-01 -0.147 0.0956 0.547 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 554607 sc-eQTL 7.57e-01 0.03 0.0968 0.547 B_Naive LOneK1K
ENSG00000162434 JAK1 -919426 sc-eQTL 4.51e-01 -0.053 0.0701 0.547 B_Naive LOneK1K
ENSG00000203965 EFCAB7 624956 sc-eQTL 6.67e-01 0.0419 0.0973 0.547 B_Naive LOneK1K
ENSG00000079739 PGM1 554917 sc-eQTL 1.90e-01 0.118 0.0898 0.547 CD14_Mono LOneK1K
ENSG00000088035 ALG6 780753 sc-eQTL 9.22e-01 0.00856 0.0873 0.547 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 554607 sc-eQTL 3.16e-01 -0.0903 0.0897 0.547 CD14_Mono LOneK1K
ENSG00000162433 AK4 -999221 sc-eQTL 8.36e-01 0.0184 0.0889 0.547 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -919426 sc-eQTL 2.88e-01 -0.0789 0.0742 0.547 CD14_Mono LOneK1K
ENSG00000079739 PGM1 554917 sc-eQTL 4.53e-01 -0.0644 0.0857 0.547 CD16_Mono LOneK1K
ENSG00000088035 ALG6 780753 sc-eQTL 4.87e-01 0.0677 0.0973 0.547 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 554607 sc-eQTL 5.05e-01 0.0636 0.0953 0.547 CD16_Mono LOneK1K
ENSG00000162433 AK4 -999221 sc-eQTL 7.64e-01 -0.0254 0.0845 0.547 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -919426 sc-eQTL 7.21e-01 -0.0203 0.0569 0.547 CD16_Mono LOneK1K
ENSG00000079739 PGM1 554917 sc-eQTL 1.96e-01 0.0948 0.0731 0.547 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 780753 sc-eQTL 9.87e-01 -0.00139 0.0881 0.547 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 554607 sc-eQTL 9.63e-01 -0.00438 0.0934 0.547 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -919426 sc-eQTL 1.13e-01 -0.0701 0.0441 0.547 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 624956 sc-eQTL 7.11e-01 -0.0383 0.103 0.547 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000185483 ROR1 374311 pQTL 9.24e-16 -0.104 0.0128 0.138 0.104 0.444
ENSG00000230798 FOXD3-AS1 823887 eQTL 0.0202 0.0591 0.0254 0.0 0.0 0.447

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina