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Genes within 1Mb (chr1:64147962:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 554551 sc-eQTL 6.99e-01 0.0315 0.0813 0.549 B L1
ENSG00000088035 ALG6 780387 sc-eQTL 1.31e-02 -0.208 0.0831 0.549 B L1
ENSG00000142856 ITGB3BP 554241 sc-eQTL 7.78e-01 0.0263 0.0932 0.549 B L1
ENSG00000162434 JAK1 -919792 sc-eQTL 2.48e-01 -0.0663 0.0572 0.549 B L1
ENSG00000203965 EFCAB7 624590 sc-eQTL 3.64e-01 0.0866 0.0953 0.549 B L1
ENSG00000079739 PGM1 554551 sc-eQTL 6.03e-01 -0.0369 0.0709 0.549 CD4T L1
ENSG00000088035 ALG6 780387 sc-eQTL 1.29e-01 0.119 0.0779 0.549 CD4T L1
ENSG00000142856 ITGB3BP 554241 sc-eQTL 9.12e-01 0.0101 0.0909 0.549 CD4T L1
ENSG00000158966 CACHD1 -322167 sc-eQTL 3.14e-01 0.0546 0.0541 0.549 CD4T L1
ENSG00000162434 JAK1 -919792 sc-eQTL 1.52e-01 -0.0814 0.0566 0.549 CD4T L1
ENSG00000203965 EFCAB7 624590 sc-eQTL 2.21e-02 0.186 0.0806 0.549 CD4T L1
ENSG00000079739 PGM1 554551 sc-eQTL 3.49e-02 -0.163 0.077 0.549 CD8T L1
ENSG00000088035 ALG6 780387 sc-eQTL 6.26e-02 0.159 0.0851 0.549 CD8T L1
ENSG00000142856 ITGB3BP 554241 sc-eQTL 1.79e-01 0.124 0.0919 0.549 CD8T L1
ENSG00000158966 CACHD1 -322167 sc-eQTL 3.44e-01 0.0442 0.0466 0.549 CD8T L1
ENSG00000162434 JAK1 -919792 sc-eQTL 1.54e-01 -0.105 0.0732 0.549 CD8T L1
ENSG00000203965 EFCAB7 624590 sc-eQTL 7.16e-01 0.0335 0.092 0.549 CD8T L1
ENSG00000079739 PGM1 554551 sc-eQTL 1.38e-01 -0.132 0.0884 0.55 DC L1
ENSG00000088035 ALG6 780387 sc-eQTL 8.04e-01 0.0228 0.0918 0.55 DC L1
ENSG00000142856 ITGB3BP 554241 sc-eQTL 6.13e-01 0.0521 0.103 0.55 DC L1
ENSG00000162433 AK4 -999587 sc-eQTL 5.68e-01 0.0466 0.0814 0.55 DC L1
ENSG00000162434 JAK1 -919792 sc-eQTL 3.44e-01 -0.0642 0.0676 0.55 DC L1
ENSG00000162437 RAVER2 -597133 sc-eQTL 9.83e-01 -0.00188 0.0869 0.55 DC L1
ENSG00000203965 EFCAB7 624590 sc-eQTL 4.16e-01 0.0728 0.0894 0.55 DC L1
ENSG00000079739 PGM1 554551 sc-eQTL 5.45e-01 0.0515 0.0848 0.549 Mono L1
ENSG00000088035 ALG6 780387 sc-eQTL 7.46e-01 0.0287 0.0885 0.549 Mono L1
ENSG00000142856 ITGB3BP 554241 sc-eQTL 7.43e-01 -0.03 0.0914 0.549 Mono L1
ENSG00000162433 AK4 -999587 sc-eQTL 9.65e-01 -0.00375 0.0863 0.549 Mono L1
ENSG00000162434 JAK1 -919792 sc-eQTL 5.71e-01 -0.0349 0.0615 0.549 Mono L1
ENSG00000079739 PGM1 554551 sc-eQTL 2.39e-01 0.086 0.0729 0.549 NK L1
ENSG00000088035 ALG6 780387 sc-eQTL 6.27e-01 -0.0417 0.0857 0.549 NK L1
ENSG00000142856 ITGB3BP 554241 sc-eQTL 5.70e-01 -0.0536 0.0942 0.549 NK L1
ENSG00000162434 JAK1 -919792 sc-eQTL 4.66e-02 -0.0871 0.0435 0.549 NK L1
ENSG00000203965 EFCAB7 624590 sc-eQTL 4.37e-01 -0.0796 0.102 0.549 NK L1
ENSG00000079739 PGM1 554551 sc-eQTL 3.20e-01 -0.0832 0.0834 0.549 Other_T L1
ENSG00000088035 ALG6 780387 sc-eQTL 5.96e-01 -0.0445 0.0839 0.549 Other_T L1
ENSG00000142856 ITGB3BP 554241 sc-eQTL 4.75e-02 0.13 0.0652 0.549 Other_T L1
ENSG00000162434 JAK1 -919792 sc-eQTL 6.64e-01 -0.0278 0.0637 0.549 Other_T L1
ENSG00000162437 RAVER2 -597133 sc-eQTL 2.06e-01 0.117 0.0923 0.549 Other_T L1
ENSG00000203965 EFCAB7 624590 sc-eQTL 2.97e-01 -0.106 0.101 0.549 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 554551 sc-eQTL 6.83e-01 0.0459 0.112 0.546 B_Activated L2
ENSG00000088035 ALG6 780387 sc-eQTL 2.11e-01 -0.134 0.107 0.546 B_Activated L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 3.79e-01 -0.0905 0.103 0.546 B_Activated L2
ENSG00000162434 JAK1 -919792 sc-eQTL 3.22e-01 -0.102 0.102 0.546 B_Activated L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 3.39e-01 0.0931 0.0971 0.546 B_Activated L2
ENSG00000079739 PGM1 554551 sc-eQTL 6.38e-01 -0.0461 0.0977 0.552 B_Intermediate L2
ENSG00000088035 ALG6 780387 sc-eQTL 3.74e-02 -0.206 0.0982 0.552 B_Intermediate L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 4.16e-01 0.0777 0.0955 0.552 B_Intermediate L2
ENSG00000162434 JAK1 -919792 sc-eQTL 4.20e-02 -0.167 0.0817 0.552 B_Intermediate L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 1.31e-01 0.143 0.0942 0.552 B_Intermediate L2
ENSG00000079739 PGM1 554551 sc-eQTL 3.79e-01 -0.0845 0.0959 0.55 B_Memory L2
ENSG00000088035 ALG6 780387 sc-eQTL 9.72e-01 -0.00348 0.0977 0.55 B_Memory L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 3.40e-01 -0.0951 0.0994 0.55 B_Memory L2
ENSG00000162434 JAK1 -919792 sc-eQTL 4.40e-01 -0.064 0.0826 0.55 B_Memory L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 8.00e-01 -0.0251 0.0989 0.55 B_Memory L2
ENSG00000079739 PGM1 554551 sc-eQTL 3.47e-01 0.0901 0.0957 0.549 B_Naive1 L2
ENSG00000088035 ALG6 780387 sc-eQTL 3.05e-01 -0.0987 0.096 0.549 B_Naive1 L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 3.37e-01 -0.0905 0.094 0.549 B_Naive1 L2
ENSG00000162434 JAK1 -919792 sc-eQTL 3.75e-01 -0.0647 0.0727 0.549 B_Naive1 L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 5.99e-01 0.0529 0.1 0.549 B_Naive1 L2
ENSG00000079739 PGM1 554551 sc-eQTL 6.66e-01 -0.0417 0.0964 0.552 B_Naive2 L2
ENSG00000088035 ALG6 780387 sc-eQTL 1.71e-01 -0.137 0.1 0.552 B_Naive2 L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 2.83e-02 0.22 0.0997 0.552 B_Naive2 L2
ENSG00000162434 JAK1 -919792 sc-eQTL 9.63e-01 -0.00366 0.0782 0.552 B_Naive2 L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 7.65e-01 -0.03 0.1 0.552 B_Naive2 L2
ENSG00000079739 PGM1 554551 sc-eQTL 7.19e-01 0.0358 0.0993 0.55 CD4_CTL L2
ENSG00000088035 ALG6 780387 sc-eQTL 5.85e-01 -0.0573 0.105 0.55 CD4_CTL L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 4.68e-01 -0.0737 0.101 0.55 CD4_CTL L2
ENSG00000158966 CACHD1 -322167 sc-eQTL 2.68e-01 -0.0409 0.0368 0.55 CD4_CTL L2
ENSG00000162434 JAK1 -919792 sc-eQTL 2.05e-01 -0.115 0.0907 0.55 CD4_CTL L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 9.80e-01 0.00242 0.0965 0.55 CD4_CTL L2
ENSG00000079739 PGM1 554551 sc-eQTL 9.05e-01 -0.00947 0.0789 0.549 CD4_Naive L2
ENSG00000088035 ALG6 780387 sc-eQTL 4.73e-01 0.0616 0.0856 0.549 CD4_Naive L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 8.76e-01 -0.0143 0.091 0.549 CD4_Naive L2
ENSG00000158966 CACHD1 -322167 sc-eQTL 4.69e-01 0.039 0.0538 0.549 CD4_Naive L2
ENSG00000162434 JAK1 -919792 sc-eQTL 1.18e-01 -0.0858 0.0547 0.549 CD4_Naive L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 3.43e-03 0.262 0.0885 0.549 CD4_Naive L2
ENSG00000079739 PGM1 554551 sc-eQTL 9.19e-01 -0.00854 0.0835 0.549 CD4_TCM L2
ENSG00000088035 ALG6 780387 sc-eQTL 7.18e-01 0.0351 0.0969 0.549 CD4_TCM L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 1.77e-01 0.133 0.0981 0.549 CD4_TCM L2
ENSG00000158966 CACHD1 -322167 sc-eQTL 7.22e-01 -0.0278 0.0781 0.549 CD4_TCM L2
ENSG00000162434 JAK1 -919792 sc-eQTL 9.86e-01 -0.00113 0.0639 0.549 CD4_TCM L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 3.61e-01 -0.0871 0.0952 0.549 CD4_TCM L2
ENSG00000079739 PGM1 554551 sc-eQTL 8.05e-01 -0.0244 0.0989 0.549 CD4_TEM L2
ENSG00000088035 ALG6 780387 sc-eQTL 2.85e-03 0.294 0.0973 0.549 CD4_TEM L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 9.28e-01 0.00877 0.0971 0.549 CD4_TEM L2
ENSG00000158966 CACHD1 -322167 sc-eQTL 3.37e-01 -0.0576 0.0599 0.549 CD4_TEM L2
ENSG00000162434 JAK1 -919792 sc-eQTL 3.68e-01 -0.077 0.0852 0.549 CD4_TEM L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 5.12e-01 0.066 0.101 0.549 CD4_TEM L2
ENSG00000079739 PGM1 554551 sc-eQTL 4.36e-01 -0.0686 0.0879 0.549 CD8_CTL L2
ENSG00000088035 ALG6 780387 sc-eQTL 1.35e-02 0.23 0.0923 0.549 CD8_CTL L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 9.34e-01 0.00812 0.0983 0.549 CD8_CTL L2
ENSG00000158966 CACHD1 -322167 sc-eQTL 9.35e-01 -0.00343 0.0417 0.549 CD8_CTL L2
ENSG00000162434 JAK1 -919792 sc-eQTL 3.87e-01 -0.0674 0.0777 0.549 CD8_CTL L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 3.57e-01 0.0928 0.101 0.549 CD8_CTL L2
ENSG00000079739 PGM1 554551 sc-eQTL 4.19e-01 -0.0726 0.0895 0.549 CD8_Naive L2
ENSG00000088035 ALG6 780387 sc-eQTL 5.53e-01 -0.055 0.0927 0.549 CD8_Naive L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 7.14e-01 0.0342 0.0932 0.549 CD8_Naive L2
ENSG00000158966 CACHD1 -322167 sc-eQTL 3.95e-01 0.055 0.0645 0.549 CD8_Naive L2
ENSG00000162434 JAK1 -919792 sc-eQTL 2.49e-01 -0.0896 0.0775 0.549 CD8_Naive L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 2.88e-01 -0.0934 0.0877 0.549 CD8_Naive L2
ENSG00000079739 PGM1 554551 sc-eQTL 5.31e-01 -0.0633 0.101 0.544 CD8_TCM L2
ENSG00000088035 ALG6 780387 sc-eQTL 2.04e-01 0.13 0.102 0.544 CD8_TCM L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 2.81e-01 0.107 0.0988 0.544 CD8_TCM L2
ENSG00000158966 CACHD1 -322167 sc-eQTL 7.94e-01 0.0136 0.052 0.544 CD8_TCM L2
ENSG00000162434 JAK1 -919792 sc-eQTL 5.17e-01 -0.0543 0.0836 0.544 CD8_TCM L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 4.93e-01 0.0692 0.101 0.544 CD8_TCM L2
ENSG00000079739 PGM1 554551 sc-eQTL 2.52e-01 -0.116 0.101 0.555 CD8_TEM L2
ENSG00000088035 ALG6 780387 sc-eQTL 3.32e-01 0.0985 0.101 0.555 CD8_TEM L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 2.17e-01 0.126 0.102 0.555 CD8_TEM L2
ENSG00000158966 CACHD1 -322167 sc-eQTL 9.31e-01 -0.00181 0.0209 0.555 CD8_TEM L2
ENSG00000162434 JAK1 -919792 sc-eQTL 2.39e-01 -0.116 0.0982 0.555 CD8_TEM L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 5.55e-01 0.0586 0.0992 0.555 CD8_TEM L2
ENSG00000079739 PGM1 554551 sc-eQTL 4.21e-01 -0.0767 0.0951 0.548 MAIT L2
ENSG00000088035 ALG6 780387 sc-eQTL 2.69e-01 -0.104 0.094 0.548 MAIT L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 5.81e-01 0.0527 0.0953 0.548 MAIT L2
ENSG00000162434 JAK1 -919792 sc-eQTL 5.78e-01 0.0479 0.0861 0.548 MAIT L2
ENSG00000162437 RAVER2 -597133 sc-eQTL 1.62e-01 0.128 0.0914 0.548 MAIT L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 4.50e-01 -0.0743 0.0981 0.548 MAIT L2
ENSG00000079739 PGM1 554551 sc-eQTL 4.95e-01 -0.0652 0.0954 0.544 NK_CD56bright L2
ENSG00000088035 ALG6 780387 sc-eQTL 1.47e-01 -0.142 0.0974 0.544 NK_CD56bright L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 1.75e-01 -0.134 0.0982 0.544 NK_CD56bright L2
ENSG00000162434 JAK1 -919792 sc-eQTL 9.87e-02 -0.102 0.0618 0.544 NK_CD56bright L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 7.53e-02 -0.173 0.0966 0.544 NK_CD56bright L2
ENSG00000079739 PGM1 554551 sc-eQTL 9.41e-02 0.126 0.0749 0.55 NK_CD56dim L2
ENSG00000088035 ALG6 780387 sc-eQTL 6.37e-01 -0.0452 0.0957 0.55 NK_CD56dim L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 8.60e-01 -0.0171 0.0963 0.55 NK_CD56dim L2
ENSG00000162434 JAK1 -919792 sc-eQTL 3.87e-01 -0.044 0.0507 0.55 NK_CD56dim L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 7.33e-01 0.0355 0.104 0.55 NK_CD56dim L2
ENSG00000079739 PGM1 554551 sc-eQTL 9.81e-01 0.0024 0.102 0.55 NK_HLA L2
ENSG00000088035 ALG6 780387 sc-eQTL 5.49e-01 -0.0636 0.106 0.55 NK_HLA L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 6.07e-01 -0.051 0.0988 0.55 NK_HLA L2
ENSG00000162434 JAK1 -919792 sc-eQTL 3.76e-01 -0.0586 0.066 0.55 NK_HLA L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 1.99e-01 -0.121 0.0938 0.55 NK_HLA L2
ENSG00000079739 PGM1 554551 sc-eQTL 5.69e-01 0.0468 0.082 0.55 NK_cytokine L2
ENSG00000088035 ALG6 780387 sc-eQTL 3.64e-01 0.0842 0.0926 0.55 NK_cytokine L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 3.10e-01 -0.0924 0.0908 0.55 NK_cytokine L2
ENSG00000162434 JAK1 -919792 sc-eQTL 4.01e-02 -0.111 0.0537 0.55 NK_cytokine L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 8.88e-01 0.0137 0.097 0.55 NK_cytokine L2
ENSG00000079739 PGM1 554551 sc-eQTL 8.63e-01 0.0187 0.108 0.533 PB L2
ENSG00000088035 ALG6 780387 sc-eQTL 7.66e-01 0.034 0.114 0.533 PB L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 4.55e-01 0.0791 0.106 0.533 PB L2
ENSG00000162434 JAK1 -919792 sc-eQTL 5.68e-01 -0.0456 0.0798 0.533 PB L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 7.35e-01 0.0394 0.116 0.533 PB L2
ENSG00000079739 PGM1 554551 sc-eQTL 2.86e-01 -0.0979 0.0914 0.541 Pro_T L2
ENSG00000088035 ALG6 780387 sc-eQTL 9.22e-02 0.157 0.0926 0.541 Pro_T L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 2.38e-01 0.097 0.0819 0.541 Pro_T L2
ENSG00000162434 JAK1 -919792 sc-eQTL 3.30e-01 -0.0631 0.0647 0.541 Pro_T L2
ENSG00000162437 RAVER2 -597133 sc-eQTL 3.56e-01 0.079 0.0853 0.541 Pro_T L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 9.28e-01 0.00863 0.0955 0.541 Pro_T L2
ENSG00000079739 PGM1 554551 sc-eQTL 1.40e-01 -0.137 0.0922 0.549 Treg L2
ENSG00000088035 ALG6 780387 sc-eQTL 7.23e-01 -0.0352 0.0991 0.549 Treg L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 3.20e-01 -0.0969 0.0971 0.549 Treg L2
ENSG00000158966 CACHD1 -322167 sc-eQTL 2.47e-01 0.0852 0.0733 0.549 Treg L2
ENSG00000162434 JAK1 -919792 sc-eQTL 9.99e-01 -9.42e-05 0.0783 0.549 Treg L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 3.55e-01 -0.0862 0.0929 0.549 Treg L2
ENSG00000079739 PGM1 554551 sc-eQTL 4.54e-01 -0.0734 0.0978 0.556 cDC L2
ENSG00000088035 ALG6 780387 sc-eQTL 2.21e-01 -0.122 0.0989 0.556 cDC L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 2.34e-01 0.128 0.107 0.556 cDC L2
ENSG00000162433 AK4 -999587 sc-eQTL 3.69e-01 0.0805 0.0894 0.556 cDC L2
ENSG00000162434 JAK1 -919792 sc-eQTL 1.66e-02 -0.199 0.0823 0.556 cDC L2
ENSG00000162437 RAVER2 -597133 sc-eQTL 3.91e-01 0.0788 0.0917 0.556 cDC L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 3.85e-01 -0.0749 0.086 0.556 cDC L2
ENSG00000079739 PGM1 554551 sc-eQTL 4.44e-01 0.0676 0.0881 0.549 cMono_IL1B L2
ENSG00000088035 ALG6 780387 sc-eQTL 2.11e-01 0.11 0.088 0.549 cMono_IL1B L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 3.65e-01 -0.0841 0.0926 0.549 cMono_IL1B L2
ENSG00000162433 AK4 -999587 sc-eQTL 6.17e-01 -0.0437 0.0872 0.549 cMono_IL1B L2
ENSG00000162434 JAK1 -919792 sc-eQTL 1.15e-01 -0.125 0.0789 0.549 cMono_IL1B L2
ENSG00000079739 PGM1 554551 sc-eQTL 5.20e-01 0.0632 0.098 0.549 cMono_S100A L2
ENSG00000088035 ALG6 780387 sc-eQTL 6.40e-02 -0.184 0.0986 0.549 cMono_S100A L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 7.93e-01 -0.0237 0.0901 0.549 cMono_S100A L2
ENSG00000162433 AK4 -999587 sc-eQTL 3.08e-01 0.0906 0.0887 0.549 cMono_S100A L2
ENSG00000162434 JAK1 -919792 sc-eQTL 9.31e-01 0.00709 0.0821 0.549 cMono_S100A L2
ENSG00000079739 PGM1 554551 sc-eQTL 1.69e-01 -0.151 0.109 0.545 gdT L2
ENSG00000088035 ALG6 780387 sc-eQTL 8.69e-01 0.0194 0.117 0.545 gdT L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 2.09e-02 0.268 0.115 0.545 gdT L2
ENSG00000162434 JAK1 -919792 sc-eQTL 2.90e-02 -0.255 0.115 0.545 gdT L2
ENSG00000162437 RAVER2 -597133 sc-eQTL 2.44e-01 0.12 0.103 0.545 gdT L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 2.86e-01 0.123 0.115 0.545 gdT L2
ENSG00000079739 PGM1 554551 sc-eQTL 5.31e-02 -0.189 0.0973 0.547 intMono L2
ENSG00000088035 ALG6 780387 sc-eQTL 1.17e-01 0.143 0.0909 0.547 intMono L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 8.73e-01 -0.0158 0.0982 0.547 intMono L2
ENSG00000162433 AK4 -999587 sc-eQTL 6.65e-01 0.0376 0.0867 0.547 intMono L2
ENSG00000162434 JAK1 -919792 sc-eQTL 9.93e-01 0.000751 0.0802 0.547 intMono L2
ENSG00000079739 PGM1 554551 sc-eQTL 3.59e-01 0.0824 0.0896 0.552 ncMono L2
ENSG00000088035 ALG6 780387 sc-eQTL 5.60e-01 -0.0576 0.0986 0.552 ncMono L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 3.48e-01 0.089 0.0947 0.552 ncMono L2
ENSG00000162433 AK4 -999587 sc-eQTL 1.33e-01 -0.124 0.0823 0.552 ncMono L2
ENSG00000162434 JAK1 -919792 sc-eQTL 9.28e-01 -0.00603 0.0669 0.552 ncMono L2
ENSG00000079739 PGM1 554551 sc-eQTL 7.36e-01 -0.0355 0.105 0.548 pDC L2
ENSG00000088035 ALG6 780387 sc-eQTL 9.31e-01 0.00886 0.102 0.548 pDC L2
ENSG00000142856 ITGB3BP 554241 sc-eQTL 1.95e-01 -0.136 0.105 0.548 pDC L2
ENSG00000162433 AK4 -999587 sc-eQTL 5.24e-01 -0.0405 0.0635 0.548 pDC L2
ENSG00000162434 JAK1 -919792 sc-eQTL 4.61e-01 0.0626 0.0847 0.548 pDC L2
ENSG00000162437 RAVER2 -597133 sc-eQTL 8.44e-01 -0.0189 0.0956 0.548 pDC L2
ENSG00000203965 EFCAB7 624590 sc-eQTL 6.88e-01 0.0375 0.0932 0.548 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 554551 sc-eQTL 3.33e-01 -0.0879 0.0906 0.549 B_Memory LOneK1K
ENSG00000088035 ALG6 780387 sc-eQTL 5.05e-02 -0.196 0.0995 0.549 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 554241 sc-eQTL 5.33e-01 -0.0578 0.0924 0.549 B_Memory LOneK1K
ENSG00000162434 JAK1 -919792 sc-eQTL 8.20e-02 -0.127 0.0725 0.549 B_Memory LOneK1K
ENSG00000203965 EFCAB7 624590 sc-eQTL 1.20e-01 0.15 0.0959 0.549 B_Memory LOneK1K
ENSG00000079739 PGM1 554551 sc-eQTL 8.55e-01 0.0171 0.0938 0.549 B_Naive LOneK1K
ENSG00000088035 ALG6 780387 sc-eQTL 1.01e-01 -0.158 0.096 0.549 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 554241 sc-eQTL 6.48e-01 0.0445 0.0973 0.549 B_Naive LOneK1K
ENSG00000162434 JAK1 -919792 sc-eQTL 4.18e-01 -0.0572 0.0705 0.549 B_Naive LOneK1K
ENSG00000203965 EFCAB7 624590 sc-eQTL 5.57e-01 0.0575 0.0978 0.549 B_Naive LOneK1K
ENSG00000079739 PGM1 554551 sc-eQTL 2.48e-01 0.105 0.0903 0.549 CD14_Mono LOneK1K
ENSG00000088035 ALG6 780387 sc-eQTL 9.53e-01 0.00521 0.0878 0.549 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 554241 sc-eQTL 3.56e-01 -0.0834 0.0902 0.549 CD14_Mono LOneK1K
ENSG00000162433 AK4 -999587 sc-eQTL 9.24e-01 0.0085 0.0893 0.549 CD14_Mono LOneK1K
ENSG00000162434 JAK1 -919792 sc-eQTL 2.74e-01 -0.0818 0.0745 0.549 CD14_Mono LOneK1K
ENSG00000079739 PGM1 554551 sc-eQTL 4.34e-01 -0.0677 0.0864 0.55 CD16_Mono LOneK1K
ENSG00000088035 ALG6 780387 sc-eQTL 4.73e-01 0.0705 0.0981 0.55 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 554241 sc-eQTL 4.60e-01 0.0712 0.0961 0.55 CD16_Mono LOneK1K
ENSG00000162433 AK4 -999587 sc-eQTL 7.25e-01 -0.03 0.0852 0.55 CD16_Mono LOneK1K
ENSG00000162434 JAK1 -919792 sc-eQTL 7.70e-01 -0.0168 0.0573 0.55 CD16_Mono LOneK1K
ENSG00000079739 PGM1 554551 sc-eQTL 1.85e-01 0.0978 0.0735 0.55 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 780387 sc-eQTL 9.27e-01 -0.00813 0.0886 0.55 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 554241 sc-eQTL 8.13e-01 -0.0222 0.0939 0.55 NK_CD56dim LOneK1K
ENSG00000162434 JAK1 -919792 sc-eQTL 1.25e-01 -0.0682 0.0443 0.55 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 624590 sc-eQTL 7.25e-01 -0.0366 0.104 0.55 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000185483 ROR1 373945 pQTL 1.12e-15 -0.105 0.0129 0.145 0.109 0.44
ENSG00000230798 FOXD3-AS1 823521 eQTL 0.0239 0.0579 0.0256 0.0 0.0 0.443

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina