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Genes within 1Mb (chr1:63756761:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 163350 sc-eQTL 8.64e-01 0.0182 0.106 0.84 B L1
ENSG00000088035 ALG6 389186 sc-eQTL 8.97e-01 0.0142 0.11 0.84 B L1
ENSG00000125703 ATG4C 972629 sc-eQTL 4.70e-01 -0.0551 0.0761 0.84 B L1
ENSG00000142856 ITGB3BP 163040 sc-eQTL 2.09e-01 0.152 0.121 0.84 B L1
ENSG00000203965 EFCAB7 233389 sc-eQTL 8.45e-01 -0.0243 0.124 0.84 B L1
ENSG00000079739 PGM1 163350 sc-eQTL 9.49e-01 -0.00588 0.0917 0.84 CD4T L1
ENSG00000088035 ALG6 389186 sc-eQTL 3.60e-01 0.0927 0.101 0.84 CD4T L1
ENSG00000125703 ATG4C 972629 sc-eQTL 1.95e-01 0.107 0.0824 0.84 CD4T L1
ENSG00000142856 ITGB3BP 163040 sc-eQTL 7.72e-02 0.207 0.117 0.84 CD4T L1
ENSG00000158966 CACHD1 -713368 sc-eQTL 2.99e-01 0.0728 0.0699 0.84 CD4T L1
ENSG00000203965 EFCAB7 233389 sc-eQTL 5.43e-01 -0.0642 0.105 0.84 CD4T L1
ENSG00000079739 PGM1 163350 sc-eQTL 6.73e-01 -0.0437 0.103 0.84 CD8T L1
ENSG00000088035 ALG6 389186 sc-eQTL 8.48e-01 -0.022 0.114 0.84 CD8T L1
ENSG00000125703 ATG4C 972629 sc-eQTL 6.29e-01 0.0531 0.11 0.84 CD8T L1
ENSG00000142856 ITGB3BP 163040 sc-eQTL 4.18e-02 0.249 0.122 0.84 CD8T L1
ENSG00000158966 CACHD1 -713368 sc-eQTL 1.84e-01 0.0824 0.0619 0.84 CD8T L1
ENSG00000203965 EFCAB7 233389 sc-eQTL 5.55e-01 0.0723 0.122 0.84 CD8T L1
ENSG00000079739 PGM1 163350 sc-eQTL 8.40e-01 -0.0235 0.116 0.836 DC L1
ENSG00000088035 ALG6 389186 sc-eQTL 3.54e-01 0.111 0.12 0.836 DC L1
ENSG00000125703 ATG4C 972629 sc-eQTL 7.76e-01 0.0274 0.0962 0.836 DC L1
ENSG00000142856 ITGB3BP 163040 sc-eQTL 3.25e-01 0.132 0.134 0.836 DC L1
ENSG00000162437 RAVER2 -988334 sc-eQTL 5.98e-01 -0.06 0.113 0.836 DC L1
ENSG00000203965 EFCAB7 233389 sc-eQTL 4.70e-01 0.0847 0.117 0.836 DC L1
ENSG00000079739 PGM1 163350 sc-eQTL 1.60e-01 0.16 0.113 0.84 Mono L1
ENSG00000088035 ALG6 389186 sc-eQTL 4.68e-01 0.0863 0.119 0.84 Mono L1
ENSG00000125703 ATG4C 972629 sc-eQTL 7.28e-01 -0.0271 0.0777 0.84 Mono L1
ENSG00000142856 ITGB3BP 163040 sc-eQTL 2.31e-01 0.147 0.122 0.84 Mono L1
ENSG00000079739 PGM1 163350 sc-eQTL 9.32e-01 -0.00796 0.0938 0.839 NK L1
ENSG00000088035 ALG6 389186 sc-eQTL 3.59e-01 0.101 0.11 0.839 NK L1
ENSG00000125703 ATG4C 972629 sc-eQTL 7.72e-01 -0.0282 0.0973 0.839 NK L1
ENSG00000142856 ITGB3BP 163040 sc-eQTL 3.10e-01 0.123 0.121 0.839 NK L1
ENSG00000203965 EFCAB7 233389 sc-eQTL 5.32e-02 -0.253 0.13 0.839 NK L1
ENSG00000079739 PGM1 163350 sc-eQTL 3.03e-01 0.112 0.108 0.84 Other_T L1
ENSG00000088035 ALG6 389186 sc-eQTL 2.51e-02 -0.243 0.108 0.84 Other_T L1
ENSG00000125703 ATG4C 972629 sc-eQTL 8.53e-01 0.0179 0.0964 0.84 Other_T L1
ENSG00000142856 ITGB3BP 163040 sc-eQTL 3.15e-01 0.0859 0.0853 0.84 Other_T L1
ENSG00000162437 RAVER2 -988334 sc-eQTL 2.06e-01 0.152 0.12 0.84 Other_T L1
ENSG00000203965 EFCAB7 233389 sc-eQTL 9.38e-01 0.0103 0.132 0.84 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 163350 sc-eQTL 2.14e-01 -0.178 0.143 0.832 B_Activated L2
ENSG00000088035 ALG6 389186 sc-eQTL 1.43e-01 -0.201 0.137 0.832 B_Activated L2
ENSG00000125703 ATG4C 972629 sc-eQTL 9.73e-01 -0.00455 0.135 0.832 B_Activated L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 1.82e-01 0.176 0.131 0.832 B_Activated L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 2.15e-01 0.155 0.124 0.832 B_Activated L2
ENSG00000079739 PGM1 163350 sc-eQTL 6.19e-01 -0.0635 0.127 0.839 B_Intermediate L2
ENSG00000088035 ALG6 389186 sc-eQTL 8.34e-01 -0.0272 0.129 0.839 B_Intermediate L2
ENSG00000125703 ATG4C 972629 sc-eQTL 8.63e-01 -0.0181 0.105 0.839 B_Intermediate L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 3.41e-01 0.119 0.124 0.839 B_Intermediate L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 1.83e-01 0.164 0.123 0.839 B_Intermediate L2
ENSG00000079739 PGM1 163350 sc-eQTL 4.63e-01 0.092 0.125 0.841 B_Memory L2
ENSG00000088035 ALG6 389186 sc-eQTL 7.80e-01 -0.0357 0.127 0.841 B_Memory L2
ENSG00000125703 ATG4C 972629 sc-eQTL 8.53e-01 0.0211 0.114 0.841 B_Memory L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 9.60e-01 -0.00649 0.13 0.841 B_Memory L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 1.50e-02 -0.312 0.127 0.841 B_Memory L2
ENSG00000079739 PGM1 163350 sc-eQTL 8.84e-01 0.0183 0.126 0.84 B_Naive1 L2
ENSG00000088035 ALG6 389186 sc-eQTL 7.66e-01 0.0376 0.126 0.84 B_Naive1 L2
ENSG00000125703 ATG4C 972629 sc-eQTL 4.33e-01 -0.0731 0.0931 0.84 B_Naive1 L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 4.84e-01 0.0867 0.124 0.84 B_Naive1 L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 3.63e-01 -0.12 0.132 0.84 B_Naive1 L2
ENSG00000079739 PGM1 163350 sc-eQTL 8.45e-01 0.0245 0.125 0.839 B_Naive2 L2
ENSG00000088035 ALG6 389186 sc-eQTL 9.92e-01 -0.0013 0.13 0.839 B_Naive2 L2
ENSG00000125703 ATG4C 972629 sc-eQTL 7.03e-01 0.046 0.12 0.839 B_Naive2 L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 7.87e-01 0.0353 0.131 0.839 B_Naive2 L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 4.43e-01 -0.0998 0.13 0.839 B_Naive2 L2
ENSG00000079739 PGM1 163350 sc-eQTL 4.84e-01 0.0933 0.133 0.843 CD4_CTL L2
ENSG00000088035 ALG6 389186 sc-eQTL 1.84e-01 0.187 0.14 0.843 CD4_CTL L2
ENSG00000125703 ATG4C 972629 sc-eQTL 1.83e-04 -0.469 0.123 0.843 CD4_CTL L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 8.32e-02 0.235 0.135 0.843 CD4_CTL L2
ENSG00000158966 CACHD1 -713368 sc-eQTL 3.27e-01 0.0485 0.0494 0.843 CD4_CTL L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 7.59e-01 -0.0398 0.129 0.843 CD4_CTL L2
ENSG00000079739 PGM1 163350 sc-eQTL 8.87e-01 -0.0146 0.103 0.84 CD4_Naive L2
ENSG00000088035 ALG6 389186 sc-eQTL 4.62e-02 0.222 0.111 0.84 CD4_Naive L2
ENSG00000125703 ATG4C 972629 sc-eQTL 2.83e-01 0.104 0.0967 0.84 CD4_Naive L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 1.39e-01 0.175 0.118 0.84 CD4_Naive L2
ENSG00000158966 CACHD1 -713368 sc-eQTL 3.44e-01 0.0664 0.07 0.84 CD4_Naive L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 6.82e-01 0.0482 0.118 0.84 CD4_Naive L2
ENSG00000079739 PGM1 163350 sc-eQTL 3.42e-01 -0.101 0.106 0.84 CD4_TCM L2
ENSG00000088035 ALG6 389186 sc-eQTL 6.56e-01 -0.0549 0.123 0.84 CD4_TCM L2
ENSG00000125703 ATG4C 972629 sc-eQTL 3.41e-01 0.101 0.106 0.84 CD4_TCM L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 2.02e-01 0.16 0.125 0.84 CD4_TCM L2
ENSG00000158966 CACHD1 -713368 sc-eQTL 7.28e-01 -0.0345 0.0991 0.84 CD4_TCM L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 2.81e-01 0.13 0.121 0.84 CD4_TCM L2
ENSG00000079739 PGM1 163350 sc-eQTL 2.74e-01 0.137 0.125 0.84 CD4_TEM L2
ENSG00000088035 ALG6 389186 sc-eQTL 8.06e-01 -0.031 0.126 0.84 CD4_TEM L2
ENSG00000125703 ATG4C 972629 sc-eQTL 8.85e-01 -0.0172 0.12 0.84 CD4_TEM L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 5.58e-02 0.235 0.122 0.84 CD4_TEM L2
ENSG00000158966 CACHD1 -713368 sc-eQTL 2.05e-01 0.0966 0.076 0.84 CD4_TEM L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 7.44e-03 -0.34 0.126 0.84 CD4_TEM L2
ENSG00000079739 PGM1 163350 sc-eQTL 5.65e-01 -0.0682 0.118 0.84 CD8_CTL L2
ENSG00000088035 ALG6 389186 sc-eQTL 1.19e-01 -0.196 0.125 0.84 CD8_CTL L2
ENSG00000125703 ATG4C 972629 sc-eQTL 9.05e-01 -0.0153 0.127 0.84 CD8_CTL L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 4.51e-01 0.0997 0.132 0.84 CD8_CTL L2
ENSG00000158966 CACHD1 -713368 sc-eQTL 4.54e-01 0.0421 0.056 0.84 CD8_CTL L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 5.15e-01 0.0884 0.135 0.84 CD8_CTL L2
ENSG00000079739 PGM1 163350 sc-eQTL 7.73e-01 0.0339 0.117 0.84 CD8_Naive L2
ENSG00000088035 ALG6 389186 sc-eQTL 5.23e-01 0.0777 0.122 0.84 CD8_Naive L2
ENSG00000125703 ATG4C 972629 sc-eQTL 3.56e-01 0.111 0.12 0.84 CD8_Naive L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 4.23e-02 0.247 0.121 0.84 CD8_Naive L2
ENSG00000158966 CACHD1 -713368 sc-eQTL 2.62e-01 0.0951 0.0845 0.84 CD8_Naive L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 6.77e-01 -0.0481 0.115 0.84 CD8_Naive L2
ENSG00000079739 PGM1 163350 sc-eQTL 8.01e-01 -0.0331 0.131 0.843 CD8_TCM L2
ENSG00000088035 ALG6 389186 sc-eQTL 6.34e-01 0.0632 0.132 0.843 CD8_TCM L2
ENSG00000125703 ATG4C 972629 sc-eQTL 6.05e-01 -0.0684 0.132 0.843 CD8_TCM L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 8.82e-01 -0.0192 0.128 0.843 CD8_TCM L2
ENSG00000158966 CACHD1 -713368 sc-eQTL 3.38e-02 0.143 0.0667 0.843 CD8_TCM L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 1.67e-01 -0.181 0.13 0.843 CD8_TCM L2
ENSG00000079739 PGM1 163350 sc-eQTL 8.18e-01 -0.0314 0.136 0.838 CD8_TEM L2
ENSG00000088035 ALG6 389186 sc-eQTL 4.10e-01 0.113 0.136 0.838 CD8_TEM L2
ENSG00000125703 ATG4C 972629 sc-eQTL 5.26e-01 0.0806 0.127 0.838 CD8_TEM L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 6.31e-01 -0.0662 0.138 0.838 CD8_TEM L2
ENSG00000158966 CACHD1 -713368 sc-eQTL 5.31e-01 0.0176 0.028 0.838 CD8_TEM L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 2.91e-01 0.141 0.133 0.838 CD8_TEM L2
ENSG00000079739 PGM1 163350 sc-eQTL 7.20e-01 -0.0452 0.126 0.844 MAIT L2
ENSG00000088035 ALG6 389186 sc-eQTL 3.53e-01 -0.116 0.124 0.844 MAIT L2
ENSG00000125703 ATG4C 972629 sc-eQTL 6.65e-01 0.0546 0.126 0.844 MAIT L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 1.13e-01 0.199 0.125 0.844 MAIT L2
ENSG00000162437 RAVER2 -988334 sc-eQTL 4.78e-01 0.0861 0.121 0.844 MAIT L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 4.81e-01 -0.0916 0.13 0.844 MAIT L2
ENSG00000079739 PGM1 163350 sc-eQTL 8.94e-01 0.0165 0.124 0.842 NK_CD56bright L2
ENSG00000088035 ALG6 389186 sc-eQTL 1.65e-01 0.176 0.126 0.842 NK_CD56bright L2
ENSG00000125703 ATG4C 972629 sc-eQTL 1.91e-01 0.161 0.122 0.842 NK_CD56bright L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 1.79e-01 0.172 0.127 0.842 NK_CD56bright L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 5.67e-01 0.0723 0.126 0.842 NK_CD56bright L2
ENSG00000079739 PGM1 163350 sc-eQTL 5.41e-01 -0.0598 0.0978 0.838 NK_CD56dim L2
ENSG00000088035 ALG6 389186 sc-eQTL 4.21e-01 0.1 0.124 0.838 NK_CD56dim L2
ENSG00000125703 ATG4C 972629 sc-eQTL 7.44e-01 -0.0359 0.11 0.838 NK_CD56dim L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 6.02e-01 -0.0651 0.125 0.838 NK_CD56dim L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 3.56e-01 -0.125 0.135 0.838 NK_CD56dim L2
ENSG00000079739 PGM1 163350 sc-eQTL 9.10e-01 -0.0153 0.136 0.842 NK_HLA L2
ENSG00000088035 ALG6 389186 sc-eQTL 8.10e-01 -0.0337 0.141 0.842 NK_HLA L2
ENSG00000125703 ATG4C 972629 sc-eQTL 1.93e-01 0.162 0.124 0.842 NK_HLA L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 9.75e-01 -0.00408 0.131 0.842 NK_HLA L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 3.13e-03 -0.366 0.122 0.842 NK_HLA L2
ENSG00000079739 PGM1 163350 sc-eQTL 9.16e-01 0.0113 0.107 0.838 NK_cytokine L2
ENSG00000088035 ALG6 389186 sc-eQTL 2.84e-01 0.129 0.12 0.838 NK_cytokine L2
ENSG00000125703 ATG4C 972629 sc-eQTL 3.07e-01 -0.117 0.114 0.838 NK_cytokine L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 7.60e-01 0.0362 0.118 0.838 NK_cytokine L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 2.63e-01 -0.141 0.126 0.838 NK_cytokine L2
ENSG00000079739 PGM1 163350 sc-eQTL 2.61e-01 0.175 0.155 0.815 PB L2
ENSG00000088035 ALG6 389186 sc-eQTL 2.22e-01 0.2 0.162 0.815 PB L2
ENSG00000125703 ATG4C 972629 sc-eQTL 7.80e-01 0.0426 0.152 0.815 PB L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 7.05e-01 0.0577 0.152 0.815 PB L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 9.22e-01 0.0163 0.167 0.815 PB L2
ENSG00000079739 PGM1 163350 sc-eQTL 5.50e-01 0.0696 0.116 0.839 Pro_T L2
ENSG00000088035 ALG6 389186 sc-eQTL 1.13e-01 -0.187 0.117 0.839 Pro_T L2
ENSG00000125703 ATG4C 972629 sc-eQTL 2.07e-01 -0.131 0.103 0.839 Pro_T L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 5.93e-01 0.0557 0.104 0.839 Pro_T L2
ENSG00000162437 RAVER2 -988334 sc-eQTL 6.15e-02 0.202 0.107 0.839 Pro_T L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 3.95e-01 -0.103 0.121 0.839 Pro_T L2
ENSG00000079739 PGM1 163350 sc-eQTL 1.87e-01 -0.16 0.121 0.84 Treg L2
ENSG00000088035 ALG6 389186 sc-eQTL 5.11e-01 -0.0855 0.13 0.84 Treg L2
ENSG00000125703 ATG4C 972629 sc-eQTL 4.21e-02 0.247 0.121 0.84 Treg L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 7.68e-01 -0.0377 0.128 0.84 Treg L2
ENSG00000158966 CACHD1 -713368 sc-eQTL 3.18e-01 0.0962 0.0962 0.84 Treg L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 9.81e-01 0.00289 0.122 0.84 Treg L2
ENSG00000079739 PGM1 163350 sc-eQTL 5.85e-01 -0.0695 0.127 0.844 cDC L2
ENSG00000088035 ALG6 389186 sc-eQTL 6.91e-01 0.0513 0.129 0.844 cDC L2
ENSG00000125703 ATG4C 972629 sc-eQTL 3.38e-01 -0.105 0.11 0.844 cDC L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 3.87e-01 -0.121 0.139 0.844 cDC L2
ENSG00000162437 RAVER2 -988334 sc-eQTL 9.18e-01 -0.0123 0.119 0.844 cDC L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 6.55e-01 0.05 0.112 0.844 cDC L2
ENSG00000079739 PGM1 163350 sc-eQTL 3.19e-01 0.116 0.117 0.84 cMono_IL1B L2
ENSG00000088035 ALG6 389186 sc-eQTL 7.97e-01 0.0301 0.117 0.84 cMono_IL1B L2
ENSG00000125703 ATG4C 972629 sc-eQTL 9.91e-01 0.000953 0.0867 0.84 cMono_IL1B L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 5.06e-01 0.0818 0.123 0.84 cMono_IL1B L2
ENSG00000079739 PGM1 163350 sc-eQTL 6.13e-01 0.0654 0.129 0.84 cMono_S100A L2
ENSG00000088035 ALG6 389186 sc-eQTL 6.93e-01 0.0516 0.131 0.84 cMono_S100A L2
ENSG00000125703 ATG4C 972629 sc-eQTL 3.10e-01 -0.106 0.105 0.84 cMono_S100A L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 8.69e-02 0.202 0.118 0.84 cMono_S100A L2
ENSG00000079739 PGM1 163350 sc-eQTL 8.90e-01 0.02 0.145 0.858 gdT L2
ENSG00000088035 ALG6 389186 sc-eQTL 8.66e-01 0.026 0.154 0.858 gdT L2
ENSG00000125703 ATG4C 972629 sc-eQTL 4.96e-01 0.0986 0.144 0.858 gdT L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 7.75e-01 0.0439 0.154 0.858 gdT L2
ENSG00000162437 RAVER2 -988334 sc-eQTL 5.58e-01 -0.0797 0.136 0.858 gdT L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 8.44e-01 0.0299 0.151 0.858 gdT L2
ENSG00000079739 PGM1 163350 sc-eQTL 5.69e-01 0.074 0.13 0.836 intMono L2
ENSG00000088035 ALG6 389186 sc-eQTL 1.24e-01 0.186 0.12 0.836 intMono L2
ENSG00000125703 ATG4C 972629 sc-eQTL 4.88e-01 0.0818 0.118 0.836 intMono L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 6.79e-01 -0.0538 0.13 0.836 intMono L2
ENSG00000079739 PGM1 163350 sc-eQTL 2.29e-01 -0.143 0.119 0.835 ncMono L2
ENSG00000088035 ALG6 389186 sc-eQTL 4.15e-01 0.107 0.131 0.835 ncMono L2
ENSG00000125703 ATG4C 972629 sc-eQTL 3.68e-01 -0.109 0.12 0.835 ncMono L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 8.41e-01 0.0254 0.126 0.835 ncMono L2
ENSG00000079739 PGM1 163350 sc-eQTL 2.17e-01 0.178 0.143 0.833 pDC L2
ENSG00000088035 ALG6 389186 sc-eQTL 4.51e-01 0.106 0.14 0.833 pDC L2
ENSG00000125703 ATG4C 972629 sc-eQTL 6.22e-01 0.0634 0.128 0.833 pDC L2
ENSG00000142856 ITGB3BP 163040 sc-eQTL 2.17e-01 0.178 0.144 0.833 pDC L2
ENSG00000162437 RAVER2 -988334 sc-eQTL 5.32e-01 0.0819 0.131 0.833 pDC L2
ENSG00000203965 EFCAB7 233389 sc-eQTL 6.60e-01 0.0562 0.128 0.833 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 163350 sc-eQTL 9.24e-01 -0.0112 0.118 0.84 B_Memory LOneK1K
ENSG00000088035 ALG6 389186 sc-eQTL 3.40e-01 -0.125 0.13 0.84 B_Memory LOneK1K
ENSG00000125703 ATG4C 972629 sc-eQTL 8.65e-01 -0.0156 0.0916 0.84 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 163040 sc-eQTL 4.45e-01 0.092 0.12 0.84 B_Memory LOneK1K
ENSG00000203965 EFCAB7 233389 sc-eQTL 9.87e-01 -0.00207 0.125 0.84 B_Memory LOneK1K
ENSG00000079739 PGM1 163350 sc-eQTL 8.09e-01 0.0297 0.123 0.84 B_Naive LOneK1K
ENSG00000088035 ALG6 389186 sc-eQTL 7.22e-01 0.0449 0.126 0.84 B_Naive LOneK1K
ENSG00000125703 ATG4C 972629 sc-eQTL 5.35e-01 -0.0559 0.0899 0.84 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 163040 sc-eQTL 3.61e-01 0.116 0.127 0.84 B_Naive LOneK1K
ENSG00000203965 EFCAB7 233389 sc-eQTL 2.13e-01 -0.159 0.127 0.84 B_Naive LOneK1K
ENSG00000079739 PGM1 163350 sc-eQTL 2.27e-01 0.144 0.119 0.84 CD14_Mono LOneK1K
ENSG00000088035 ALG6 389186 sc-eQTL 7.98e-01 0.0297 0.116 0.84 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 972629 sc-eQTL 8.96e-01 -0.0106 0.0806 0.84 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 163040 sc-eQTL 1.63e-01 0.166 0.119 0.84 CD14_Mono LOneK1K
ENSG00000079739 PGM1 163350 sc-eQTL 4.61e-01 -0.0843 0.114 0.838 CD16_Mono LOneK1K
ENSG00000088035 ALG6 389186 sc-eQTL 1.58e-01 0.183 0.129 0.838 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 972629 sc-eQTL 9.05e-01 0.0131 0.109 0.838 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 163040 sc-eQTL 5.98e-01 -0.067 0.127 0.838 CD16_Mono LOneK1K
ENSG00000079739 PGM1 163350 sc-eQTL 7.09e-01 -0.0357 0.0955 0.838 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 389186 sc-eQTL 3.74e-01 0.102 0.115 0.838 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 972629 sc-eQTL 7.60e-01 -0.0314 0.103 0.838 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 163040 sc-eQTL 6.55e-01 0.0544 0.122 0.838 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 233389 sc-eQTL 4.28e-02 -0.271 0.133 0.838 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000203965 EFCAB7 233389 eQTL 4.98e-02 -0.0604 0.0307 0.00113 0.0 0.169

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000230798 \N 432320 1.04e-06 8.78e-07 2.06e-07 3.25e-07 1.05e-07 2.77e-07 7.02e-07 1.55e-07 8.66e-07 3.1e-07 1.16e-06 5.73e-07 1.63e-06 2.29e-07 3.58e-07 2.99e-07 7.22e-07 4.33e-07 3.79e-07 3.34e-07 2.01e-07 5.71e-07 4.59e-07 2.29e-07 1.71e-06 2.55e-07 3.1e-07 4.94e-07 4.9e-07 9.08e-07 5.26e-07 5.3e-08 1.35e-07 2.22e-07 3.16e-07 1.44e-07 3.62e-07 9.84e-08 1.11e-07 9.55e-09 2.8e-07 9.5e-07 4.12e-08 5.7e-08 9.79e-08 1.48e-08 1.1e-07 2.41e-08 5.86e-08