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Genes within 1Mb (chr1:63752406:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 158995 sc-eQTL 8.13e-01 0.0252 0.106 0.846 B L1
ENSG00000088035 ALG6 384831 sc-eQTL 9.02e-01 0.0136 0.11 0.846 B L1
ENSG00000125703 ATG4C 968274 sc-eQTL 4.09e-01 -0.0632 0.0764 0.846 B L1
ENSG00000142856 ITGB3BP 158685 sc-eQTL 2.72e-01 0.134 0.121 0.846 B L1
ENSG00000203965 EFCAB7 229034 sc-eQTL 9.88e-01 -0.00195 0.125 0.846 B L1
ENSG00000079739 PGM1 158995 sc-eQTL 8.18e-01 -0.0212 0.0922 0.846 CD4T L1
ENSG00000088035 ALG6 384831 sc-eQTL 4.97e-01 0.0693 0.102 0.846 CD4T L1
ENSG00000125703 ATG4C 968274 sc-eQTL 2.69e-01 0.0919 0.083 0.846 CD4T L1
ENSG00000142856 ITGB3BP 158685 sc-eQTL 4.59e-02 0.235 0.117 0.846 CD4T L1
ENSG00000158966 CACHD1 -717723 sc-eQTL 4.02e-01 0.0591 0.0704 0.846 CD4T L1
ENSG00000203965 EFCAB7 229034 sc-eQTL 6.67e-01 -0.0457 0.106 0.846 CD4T L1
ENSG00000079739 PGM1 158995 sc-eQTL 9.20e-01 -0.0105 0.105 0.846 CD8T L1
ENSG00000088035 ALG6 384831 sc-eQTL 7.50e-01 0.0369 0.115 0.846 CD8T L1
ENSG00000125703 ATG4C 968274 sc-eQTL 8.41e-01 0.0224 0.111 0.846 CD8T L1
ENSG00000142856 ITGB3BP 158685 sc-eQTL 6.11e-02 0.232 0.123 0.846 CD8T L1
ENSG00000158966 CACHD1 -717723 sc-eQTL 1.42e-01 0.0922 0.0626 0.846 CD8T L1
ENSG00000203965 EFCAB7 229034 sc-eQTL 7.70e-01 0.0363 0.124 0.846 CD8T L1
ENSG00000079739 PGM1 158995 sc-eQTL 7.22e-01 -0.0416 0.117 0.842 DC L1
ENSG00000088035 ALG6 384831 sc-eQTL 3.29e-01 0.118 0.12 0.842 DC L1
ENSG00000125703 ATG4C 968274 sc-eQTL 6.89e-01 0.0387 0.0966 0.842 DC L1
ENSG00000142856 ITGB3BP 158685 sc-eQTL 4.14e-01 0.11 0.135 0.842 DC L1
ENSG00000162437 RAVER2 -992689 sc-eQTL 5.17e-01 -0.0739 0.114 0.842 DC L1
ENSG00000203965 EFCAB7 229034 sc-eQTL 5.49e-01 0.0705 0.118 0.842 DC L1
ENSG00000079739 PGM1 158995 sc-eQTL 1.77e-01 0.155 0.114 0.846 Mono L1
ENSG00000088035 ALG6 384831 sc-eQTL 5.93e-01 0.0639 0.119 0.846 Mono L1
ENSG00000125703 ATG4C 968274 sc-eQTL 6.02e-01 -0.0407 0.0781 0.846 Mono L1
ENSG00000142856 ITGB3BP 158685 sc-eQTL 2.47e-01 0.143 0.123 0.846 Mono L1
ENSG00000079739 PGM1 158995 sc-eQTL 8.65e-01 0.0162 0.0952 0.845 NK L1
ENSG00000088035 ALG6 384831 sc-eQTL 3.40e-01 0.106 0.111 0.845 NK L1
ENSG00000125703 ATG4C 968274 sc-eQTL 5.17e-01 -0.064 0.0986 0.845 NK L1
ENSG00000142856 ITGB3BP 158685 sc-eQTL 4.48e-01 0.0931 0.123 0.845 NK L1
ENSG00000203965 EFCAB7 229034 sc-eQTL 1.02e-01 -0.217 0.132 0.845 NK L1
ENSG00000079739 PGM1 158995 sc-eQTL 2.24e-01 0.133 0.109 0.846 Other_T L1
ENSG00000088035 ALG6 384831 sc-eQTL 2.64e-02 -0.242 0.108 0.846 Other_T L1
ENSG00000125703 ATG4C 968274 sc-eQTL 6.87e-01 0.039 0.0969 0.846 Other_T L1
ENSG00000142856 ITGB3BP 158685 sc-eQTL 2.48e-01 0.0992 0.0857 0.846 Other_T L1
ENSG00000162437 RAVER2 -992689 sc-eQTL 1.83e-01 0.161 0.12 0.846 Other_T L1
ENSG00000203965 EFCAB7 229034 sc-eQTL 6.16e-01 0.0666 0.133 0.846 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 158995 sc-eQTL 3.40e-01 -0.138 0.144 0.839 B_Activated L2
ENSG00000088035 ALG6 384831 sc-eQTL 1.00e-01 -0.228 0.138 0.839 B_Activated L2
ENSG00000125703 ATG4C 968274 sc-eQTL 9.29e-01 -0.0121 0.136 0.839 B_Activated L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 1.08e-01 0.213 0.132 0.839 B_Activated L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 2.69e-01 0.139 0.125 0.839 B_Activated L2
ENSG00000079739 PGM1 158995 sc-eQTL 5.19e-01 -0.0828 0.128 0.845 B_Intermediate L2
ENSG00000088035 ALG6 384831 sc-eQTL 8.57e-01 0.0236 0.13 0.845 B_Intermediate L2
ENSG00000125703 ATG4C 968274 sc-eQTL 1.00e+00 -5.25e-05 0.105 0.845 B_Intermediate L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 2.35e-01 0.149 0.125 0.845 B_Intermediate L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 2.03e-01 0.158 0.124 0.845 B_Intermediate L2
ENSG00000079739 PGM1 158995 sc-eQTL 3.91e-01 0.108 0.126 0.847 B_Memory L2
ENSG00000088035 ALG6 384831 sc-eQTL 7.03e-01 -0.0488 0.128 0.847 B_Memory L2
ENSG00000125703 ATG4C 968274 sc-eQTL 9.51e-01 -0.00709 0.114 0.847 B_Memory L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 8.07e-01 -0.0319 0.131 0.847 B_Memory L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 2.79e-02 -0.284 0.128 0.847 B_Memory L2
ENSG00000079739 PGM1 158995 sc-eQTL 9.43e-01 0.009 0.126 0.846 B_Naive1 L2
ENSG00000088035 ALG6 384831 sc-eQTL 7.37e-01 0.0426 0.127 0.846 B_Naive1 L2
ENSG00000125703 ATG4C 968274 sc-eQTL 5.45e-01 -0.0567 0.0935 0.846 B_Naive1 L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 4.49e-01 0.0941 0.124 0.846 B_Naive1 L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 5.27e-01 -0.084 0.132 0.846 B_Naive1 L2
ENSG00000079739 PGM1 158995 sc-eQTL 7.75e-01 0.0358 0.125 0.845 B_Naive2 L2
ENSG00000088035 ALG6 384831 sc-eQTL 9.26e-01 -0.0122 0.131 0.845 B_Naive2 L2
ENSG00000125703 ATG4C 968274 sc-eQTL 9.62e-01 0.00572 0.121 0.845 B_Naive2 L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 9.84e-01 -0.00265 0.131 0.845 B_Naive2 L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 3.00e-01 -0.135 0.13 0.845 B_Naive2 L2
ENSG00000079739 PGM1 158995 sc-eQTL 6.04e-01 0.0696 0.134 0.848 CD4_CTL L2
ENSG00000088035 ALG6 384831 sc-eQTL 2.21e-01 0.173 0.141 0.848 CD4_CTL L2
ENSG00000125703 ATG4C 968274 sc-eQTL 2.22e-04 -0.465 0.124 0.848 CD4_CTL L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 8.20e-02 0.238 0.136 0.848 CD4_CTL L2
ENSG00000158966 CACHD1 -717723 sc-eQTL 2.99e-01 0.0516 0.0496 0.848 CD4_CTL L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 6.68e-01 -0.0559 0.13 0.848 CD4_CTL L2
ENSG00000079739 PGM1 158995 sc-eQTL 6.46e-01 -0.0476 0.103 0.846 CD4_Naive L2
ENSG00000088035 ALG6 384831 sc-eQTL 7.85e-02 0.197 0.111 0.846 CD4_Naive L2
ENSG00000125703 ATG4C 968274 sc-eQTL 2.87e-01 0.104 0.0972 0.846 CD4_Naive L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 8.01e-02 0.208 0.118 0.846 CD4_Naive L2
ENSG00000158966 CACHD1 -717723 sc-eQTL 4.29e-01 0.0559 0.0705 0.846 CD4_Naive L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 5.67e-01 0.0678 0.118 0.846 CD4_Naive L2
ENSG00000079739 PGM1 158995 sc-eQTL 4.05e-01 -0.0887 0.106 0.846 CD4_TCM L2
ENSG00000088035 ALG6 384831 sc-eQTL 6.00e-01 -0.0648 0.123 0.846 CD4_TCM L2
ENSG00000125703 ATG4C 968274 sc-eQTL 6.88e-01 0.0428 0.107 0.846 CD4_TCM L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 1.66e-01 0.174 0.125 0.846 CD4_TCM L2
ENSG00000158966 CACHD1 -717723 sc-eQTL 7.69e-01 -0.0293 0.0995 0.846 CD4_TCM L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 3.18e-01 0.121 0.121 0.846 CD4_TCM L2
ENSG00000079739 PGM1 158995 sc-eQTL 3.11e-01 0.129 0.127 0.846 CD4_TEM L2
ENSG00000088035 ALG6 384831 sc-eQTL 9.92e-01 -0.00133 0.128 0.846 CD4_TEM L2
ENSG00000125703 ATG4C 968274 sc-eQTL 8.00e-01 -0.0306 0.121 0.846 CD4_TEM L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 6.54e-02 0.229 0.124 0.846 CD4_TEM L2
ENSG00000158966 CACHD1 -717723 sc-eQTL 2.60e-01 0.0868 0.0768 0.846 CD4_TEM L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 1.40e-02 -0.315 0.127 0.846 CD4_TEM L2
ENSG00000079739 PGM1 158995 sc-eQTL 8.81e-01 -0.018 0.12 0.846 CD8_CTL L2
ENSG00000088035 ALG6 384831 sc-eQTL 1.64e-01 -0.178 0.127 0.846 CD8_CTL L2
ENSG00000125703 ATG4C 968274 sc-eQTL 8.25e-01 -0.0286 0.129 0.846 CD8_CTL L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 4.01e-01 0.113 0.134 0.846 CD8_CTL L2
ENSG00000158966 CACHD1 -717723 sc-eQTL 4.78e-01 0.0404 0.0568 0.846 CD8_CTL L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 3.66e-01 0.124 0.137 0.846 CD8_CTL L2
ENSG00000079739 PGM1 158995 sc-eQTL 9.15e-01 -0.0126 0.118 0.846 CD8_Naive L2
ENSG00000088035 ALG6 384831 sc-eQTL 3.05e-01 0.125 0.122 0.846 CD8_Naive L2
ENSG00000125703 ATG4C 968274 sc-eQTL 5.95e-01 0.0645 0.121 0.846 CD8_Naive L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 5.67e-02 0.233 0.122 0.846 CD8_Naive L2
ENSG00000158966 CACHD1 -717723 sc-eQTL 2.95e-01 0.089 0.0848 0.846 CD8_Naive L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 3.95e-01 -0.0983 0.115 0.846 CD8_Naive L2
ENSG00000079739 PGM1 158995 sc-eQTL 9.57e-01 -0.00721 0.132 0.85 CD8_TCM L2
ENSG00000088035 ALG6 384831 sc-eQTL 5.38e-01 0.0824 0.134 0.85 CD8_TCM L2
ENSG00000125703 ATG4C 968274 sc-eQTL 9.03e-01 -0.0163 0.134 0.85 CD8_TCM L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 9.50e-01 -0.00819 0.13 0.85 CD8_TCM L2
ENSG00000158966 CACHD1 -717723 sc-eQTL 3.13e-02 0.146 0.0673 0.85 CD8_TCM L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 2.15e-01 -0.164 0.132 0.85 CD8_TCM L2
ENSG00000079739 PGM1 158995 sc-eQTL 9.90e-01 0.00171 0.137 0.845 CD8_TEM L2
ENSG00000088035 ALG6 384831 sc-eQTL 3.36e-01 0.132 0.137 0.845 CD8_TEM L2
ENSG00000125703 ATG4C 968274 sc-eQTL 5.37e-01 0.0794 0.128 0.845 CD8_TEM L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 3.66e-01 -0.126 0.139 0.845 CD8_TEM L2
ENSG00000158966 CACHD1 -717723 sc-eQTL 5.24e-01 0.018 0.0283 0.845 CD8_TEM L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 4.52e-01 0.101 0.134 0.845 CD8_TEM L2
ENSG00000079739 PGM1 158995 sc-eQTL 5.84e-01 -0.07 0.127 0.851 MAIT L2
ENSG00000088035 ALG6 384831 sc-eQTL 5.38e-01 -0.0778 0.126 0.851 MAIT L2
ENSG00000125703 ATG4C 968274 sc-eQTL 6.52e-01 0.0576 0.127 0.851 MAIT L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 1.58e-01 0.18 0.127 0.851 MAIT L2
ENSG00000162437 RAVER2 -992689 sc-eQTL 3.68e-01 0.111 0.123 0.851 MAIT L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 7.49e-01 -0.0422 0.132 0.851 MAIT L2
ENSG00000079739 PGM1 158995 sc-eQTL 8.72e-01 0.02 0.124 0.847 NK_CD56bright L2
ENSG00000088035 ALG6 384831 sc-eQTL 1.76e-01 0.172 0.127 0.847 NK_CD56bright L2
ENSG00000125703 ATG4C 968274 sc-eQTL 1.86e-01 0.163 0.123 0.847 NK_CD56bright L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 1.85e-01 0.17 0.128 0.847 NK_CD56bright L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 6.87e-01 0.0511 0.127 0.847 NK_CD56bright L2
ENSG00000079739 PGM1 158995 sc-eQTL 6.95e-01 -0.0391 0.0995 0.845 NK_CD56dim L2
ENSG00000088035 ALG6 384831 sc-eQTL 3.37e-01 0.121 0.126 0.845 NK_CD56dim L2
ENSG00000125703 ATG4C 968274 sc-eQTL 5.16e-01 -0.0726 0.112 0.845 NK_CD56dim L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 4.55e-01 -0.095 0.127 0.845 NK_CD56dim L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 3.74e-01 -0.122 0.137 0.845 NK_CD56dim L2
ENSG00000079739 PGM1 158995 sc-eQTL 6.63e-01 -0.0597 0.137 0.849 NK_HLA L2
ENSG00000088035 ALG6 384831 sc-eQTL 7.76e-01 -0.0405 0.142 0.849 NK_HLA L2
ENSG00000125703 ATG4C 968274 sc-eQTL 1.80e-01 0.169 0.126 0.849 NK_HLA L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 8.30e-01 0.0285 0.132 0.849 NK_HLA L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 2.93e-03 -0.372 0.123 0.849 NK_HLA L2
ENSG00000079739 PGM1 158995 sc-eQTL 7.10e-01 0.04 0.107 0.845 NK_cytokine L2
ENSG00000088035 ALG6 384831 sc-eQTL 3.36e-01 0.117 0.121 0.845 NK_cytokine L2
ENSG00000125703 ATG4C 968274 sc-eQTL 1.96e-01 -0.149 0.115 0.845 NK_cytokine L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 7.41e-01 0.0395 0.119 0.845 NK_cytokine L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 4.80e-01 -0.0898 0.127 0.845 NK_cytokine L2
ENSG00000079739 PGM1 158995 sc-eQTL 1.57e-01 0.22 0.155 0.822 PB L2
ENSG00000088035 ALG6 384831 sc-eQTL 3.41e-01 0.156 0.163 0.822 PB L2
ENSG00000125703 ATG4C 968274 sc-eQTL 6.52e-01 0.0689 0.153 0.822 PB L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 5.78e-01 0.0848 0.152 0.822 PB L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 6.24e-01 0.0822 0.167 0.822 PB L2
ENSG00000079739 PGM1 158995 sc-eQTL 4.78e-01 0.0827 0.116 0.846 Pro_T L2
ENSG00000088035 ALG6 384831 sc-eQTL 6.23e-02 -0.22 0.118 0.846 Pro_T L2
ENSG00000125703 ATG4C 968274 sc-eQTL 3.16e-01 -0.104 0.104 0.846 Pro_T L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 6.29e-01 0.0505 0.104 0.846 Pro_T L2
ENSG00000162437 RAVER2 -992689 sc-eQTL 7.98e-02 0.19 0.108 0.846 Pro_T L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 5.93e-01 -0.0649 0.121 0.846 Pro_T L2
ENSG00000079739 PGM1 158995 sc-eQTL 3.74e-01 -0.109 0.122 0.846 Treg L2
ENSG00000088035 ALG6 384831 sc-eQTL 4.30e-01 -0.103 0.131 0.846 Treg L2
ENSG00000125703 ATG4C 968274 sc-eQTL 4.96e-02 0.24 0.122 0.846 Treg L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 6.19e-01 -0.064 0.128 0.846 Treg L2
ENSG00000158966 CACHD1 -717723 sc-eQTL 3.21e-01 0.0963 0.0968 0.846 Treg L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 7.61e-01 0.0374 0.123 0.846 Treg L2
ENSG00000079739 PGM1 158995 sc-eQTL 5.17e-01 -0.083 0.128 0.851 cDC L2
ENSG00000088035 ALG6 384831 sc-eQTL 6.27e-01 0.0631 0.13 0.851 cDC L2
ENSG00000125703 ATG4C 968274 sc-eQTL 4.07e-01 -0.0918 0.11 0.851 cDC L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 3.93e-01 -0.12 0.14 0.851 cDC L2
ENSG00000162437 RAVER2 -992689 sc-eQTL 9.08e-01 -0.0139 0.12 0.851 cDC L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 8.95e-01 0.0148 0.113 0.851 cDC L2
ENSG00000079739 PGM1 158995 sc-eQTL 4.76e-01 0.0838 0.117 0.846 cMono_IL1B L2
ENSG00000088035 ALG6 384831 sc-eQTL 8.77e-01 -0.0183 0.118 0.846 cMono_IL1B L2
ENSG00000125703 ATG4C 968274 sc-eQTL 8.36e-01 -0.018 0.0873 0.846 cMono_IL1B L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 4.39e-01 0.0958 0.123 0.846 cMono_IL1B L2
ENSG00000079739 PGM1 158995 sc-eQTL 5.04e-01 0.087 0.13 0.846 cMono_S100A L2
ENSG00000088035 ALG6 384831 sc-eQTL 5.70e-01 0.075 0.132 0.846 cMono_S100A L2
ENSG00000125703 ATG4C 968274 sc-eQTL 2.99e-01 -0.11 0.106 0.846 cMono_S100A L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 1.01e-01 0.196 0.119 0.846 cMono_S100A L2
ENSG00000079739 PGM1 158995 sc-eQTL 7.82e-01 0.0404 0.146 0.861 gdT L2
ENSG00000088035 ALG6 384831 sc-eQTL 8.81e-01 0.0233 0.156 0.861 gdT L2
ENSG00000125703 ATG4C 968274 sc-eQTL 6.66e-01 0.063 0.146 0.861 gdT L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 7.20e-01 0.0556 0.155 0.861 gdT L2
ENSG00000162437 RAVER2 -992689 sc-eQTL 7.88e-01 -0.0369 0.137 0.861 gdT L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 9.52e-01 -0.00927 0.152 0.861 gdT L2
ENSG00000079739 PGM1 158995 sc-eQTL 4.41e-01 0.101 0.13 0.842 intMono L2
ENSG00000088035 ALG6 384831 sc-eQTL 1.14e-01 0.192 0.121 0.842 intMono L2
ENSG00000125703 ATG4C 968274 sc-eQTL 6.32e-01 0.0568 0.119 0.842 intMono L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 7.02e-01 -0.0501 0.131 0.842 intMono L2
ENSG00000079739 PGM1 158995 sc-eQTL 3.54e-01 -0.111 0.12 0.842 ncMono L2
ENSG00000088035 ALG6 384831 sc-eQTL 4.45e-01 0.101 0.132 0.842 ncMono L2
ENSG00000125703 ATG4C 968274 sc-eQTL 5.15e-01 -0.0789 0.121 0.842 ncMono L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 7.36e-01 0.0428 0.127 0.842 ncMono L2
ENSG00000079739 PGM1 158995 sc-eQTL 2.80e-01 0.155 0.143 0.839 pDC L2
ENSG00000088035 ALG6 384831 sc-eQTL 5.91e-01 0.0753 0.14 0.839 pDC L2
ENSG00000125703 ATG4C 968274 sc-eQTL 5.80e-01 0.071 0.128 0.839 pDC L2
ENSG00000142856 ITGB3BP 158685 sc-eQTL 3.38e-01 0.138 0.144 0.839 pDC L2
ENSG00000162437 RAVER2 -992689 sc-eQTL 5.20e-01 0.0841 0.13 0.839 pDC L2
ENSG00000203965 EFCAB7 229034 sc-eQTL 7.89e-01 0.0341 0.127 0.839 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 158995 sc-eQTL 9.28e-01 -0.0108 0.119 0.846 B_Memory LOneK1K
ENSG00000088035 ALG6 384831 sc-eQTL 4.59e-01 -0.0974 0.131 0.846 B_Memory LOneK1K
ENSG00000125703 ATG4C 968274 sc-eQTL 8.26e-01 -0.0203 0.0922 0.846 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 158685 sc-eQTL 4.41e-01 0.0934 0.121 0.846 B_Memory LOneK1K
ENSG00000203965 EFCAB7 229034 sc-eQTL 9.78e-01 0.00347 0.126 0.846 B_Memory LOneK1K
ENSG00000079739 PGM1 158995 sc-eQTL 7.91e-01 0.0327 0.123 0.846 B_Naive LOneK1K
ENSG00000088035 ALG6 384831 sc-eQTL 7.45e-01 0.0413 0.127 0.846 B_Naive LOneK1K
ENSG00000125703 ATG4C 968274 sc-eQTL 4.24e-01 -0.0723 0.0903 0.846 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 158685 sc-eQTL 5.42e-01 0.078 0.128 0.846 B_Naive LOneK1K
ENSG00000203965 EFCAB7 229034 sc-eQTL 2.44e-01 -0.15 0.128 0.846 B_Naive LOneK1K
ENSG00000079739 PGM1 158995 sc-eQTL 2.52e-01 0.138 0.12 0.846 CD14_Mono LOneK1K
ENSG00000088035 ALG6 384831 sc-eQTL 9.42e-01 0.00849 0.117 0.846 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 968274 sc-eQTL 7.77e-01 -0.023 0.0812 0.846 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 158685 sc-eQTL 1.53e-01 0.172 0.12 0.846 CD14_Mono LOneK1K
ENSG00000079739 PGM1 158995 sc-eQTL 7.14e-01 -0.0421 0.115 0.845 CD16_Mono LOneK1K
ENSG00000088035 ALG6 384831 sc-eQTL 1.60e-01 0.183 0.13 0.845 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 968274 sc-eQTL 9.73e-01 0.0037 0.11 0.845 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 158685 sc-eQTL 6.28e-01 -0.0619 0.128 0.845 CD16_Mono LOneK1K
ENSG00000079739 PGM1 158995 sc-eQTL 7.80e-01 -0.0271 0.0972 0.845 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 384831 sc-eQTL 3.63e-01 0.106 0.117 0.845 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 968274 sc-eQTL 5.20e-01 -0.0673 0.104 0.845 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 158685 sc-eQTL 8.39e-01 0.0251 0.124 0.845 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 229034 sc-eQTL 8.85e-02 -0.232 0.136 0.845 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000203965 EFCAB7 229034 eQTL 4.45e-02 -0.0617 0.0306 0.00117 0.0 0.17

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000203965 EFCAB7 229034 1.27e-06 1e-06 1.63e-07 1e-06 1.16e-07 3.54e-07 1.33e-06 3.2e-07 1.25e-06 3.76e-07 1.57e-06 5.97e-07 2.01e-06 3e-07 4.28e-07 6.57e-07 7.43e-07 5.8e-07 3.95e-07 3.72e-07 2.41e-07 1.01e-06 7.76e-07 5.39e-07 2.05e-06 2.44e-07 6.38e-07 5.31e-07 1.04e-06 1.1e-06 6.16e-07 5.93e-08 4.57e-08 5.21e-07 4.25e-07 2.89e-07 1.83e-07 7.66e-08 1.38e-07 4.09e-08 1.01e-07 1.56e-06 4.12e-08 1.21e-08 2.03e-07 4.53e-08 1.03e-07 1.79e-08 5.96e-08
ENSG00000230798 \N 427965 3.77e-07 2.88e-07 6.04e-08 2.61e-07 9.82e-08 8.63e-08 3.11e-07 5.89e-08 2.04e-07 1.11e-07 2.98e-07 1.57e-07 4.27e-07 8.55e-08 6.93e-08 9.35e-08 4.25e-08 2.21e-07 7.39e-08 5.48e-08 1.27e-07 1.89e-07 1.81e-07 4.37e-08 3.27e-07 1.31e-07 1.23e-07 1.28e-07 1.36e-07 1.38e-07 1.71e-07 3.93e-08 3.43e-08 1.03e-07 6.35e-08 2.85e-08 4.28e-08 9.25e-08 6.33e-08 6.55e-08 5.44e-08 2.8e-07 5.2e-08 1.09e-08 3.07e-08 1.19e-08 1.21e-07 1.88e-09 4.8e-08