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Genes within 1Mb (chr1:63669500:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 76089 sc-eQTL 2.94e-02 -0.165 0.0754 0.417 B L1
ENSG00000088035 ALG6 301925 sc-eQTL 4.96e-01 -0.0538 0.0789 0.417 B L1
ENSG00000116641 DOCK7 981114 sc-eQTL 1.99e-01 0.102 0.0787 0.417 B L1
ENSG00000125703 ATG4C 885368 sc-eQTL 5.58e-02 0.105 0.0545 0.417 B L1
ENSG00000142856 ITGB3BP 75779 sc-eQTL 6.86e-01 -0.0354 0.0874 0.417 B L1
ENSG00000203965 EFCAB7 146128 sc-eQTL 1.95e-01 0.116 0.0892 0.417 B L1
ENSG00000079739 PGM1 76089 sc-eQTL 2.26e-01 -0.0795 0.0655 0.417 CD4T L1
ENSG00000088035 ALG6 301925 sc-eQTL 8.74e-01 0.0115 0.0726 0.417 CD4T L1
ENSG00000116641 DOCK7 981114 sc-eQTL 6.36e-01 -0.0348 0.0734 0.417 CD4T L1
ENSG00000125703 ATG4C 885368 sc-eQTL 1.39e-01 0.0877 0.059 0.417 CD4T L1
ENSG00000142856 ITGB3BP 75779 sc-eQTL 4.33e-01 -0.066 0.0841 0.417 CD4T L1
ENSG00000158966 CACHD1 -800629 sc-eQTL 5.05e-01 -0.0335 0.0502 0.417 CD4T L1
ENSG00000203965 EFCAB7 146128 sc-eQTL 4.87e-01 0.0525 0.0755 0.417 CD4T L1
ENSG00000079739 PGM1 76089 sc-eQTL 8.71e-01 -0.0117 0.0723 0.417 CD8T L1
ENSG00000088035 ALG6 301925 sc-eQTL 8.32e-01 -0.0169 0.0797 0.417 CD8T L1
ENSG00000116641 DOCK7 981114 sc-eQTL 8.90e-01 -0.0112 0.0808 0.417 CD8T L1
ENSG00000125703 ATG4C 885368 sc-eQTL 5.31e-01 -0.0481 0.0767 0.417 CD8T L1
ENSG00000142856 ITGB3BP 75779 sc-eQTL 2.25e-01 -0.104 0.0855 0.417 CD8T L1
ENSG00000158966 CACHD1 -800629 sc-eQTL 3.59e-01 0.0398 0.0433 0.417 CD8T L1
ENSG00000203965 EFCAB7 146128 sc-eQTL 3.05e-01 -0.0878 0.0853 0.417 CD8T L1
ENSG00000079739 PGM1 76089 sc-eQTL 2.47e-01 -0.0939 0.0809 0.421 DC L1
ENSG00000088035 ALG6 301925 sc-eQTL 2.03e-01 -0.107 0.0834 0.421 DC L1
ENSG00000116641 DOCK7 981114 sc-eQTL 7.17e-01 0.0311 0.0858 0.421 DC L1
ENSG00000125703 ATG4C 885368 sc-eQTL 4.28e-01 0.0533 0.0671 0.421 DC L1
ENSG00000142856 ITGB3BP 75779 sc-eQTL 8.74e-01 0.0149 0.0939 0.421 DC L1
ENSG00000203965 EFCAB7 146128 sc-eQTL 5.25e-01 0.052 0.0817 0.421 DC L1
ENSG00000079739 PGM1 76089 sc-eQTL 5.60e-03 -0.217 0.0777 0.417 Mono L1
ENSG00000088035 ALG6 301925 sc-eQTL 4.90e-01 0.057 0.0824 0.417 Mono L1
ENSG00000116641 DOCK7 981114 sc-eQTL 9.86e-01 -0.0014 0.0798 0.417 Mono L1
ENSG00000125703 ATG4C 885368 sc-eQTL 3.36e-01 0.0519 0.0538 0.417 Mono L1
ENSG00000142856 ITGB3BP 75779 sc-eQTL 4.89e-01 0.0591 0.0851 0.417 Mono L1
ENSG00000079739 PGM1 76089 sc-eQTL 2.30e-02 -0.152 0.0662 0.418 NK L1
ENSG00000088035 ALG6 301925 sc-eQTL 9.30e-02 -0.132 0.0781 0.418 NK L1
ENSG00000116641 DOCK7 981114 sc-eQTL 5.74e-01 0.0364 0.0647 0.418 NK L1
ENSG00000125703 ATG4C 885368 sc-eQTL 9.43e-01 0.00496 0.0695 0.418 NK L1
ENSG00000142856 ITGB3BP 75779 sc-eQTL 5.35e-01 -0.0536 0.0863 0.418 NK L1
ENSG00000203965 EFCAB7 146128 sc-eQTL 6.45e-01 0.0433 0.0938 0.418 NK L1
ENSG00000079739 PGM1 76089 sc-eQTL 1.29e-01 -0.117 0.0765 0.417 Other_T L1
ENSG00000088035 ALG6 301925 sc-eQTL 5.28e-02 -0.149 0.0766 0.417 Other_T L1
ENSG00000116641 DOCK7 981114 sc-eQTL 5.85e-01 0.0431 0.0789 0.417 Other_T L1
ENSG00000125703 ATG4C 885368 sc-eQTL 1.07e-01 0.11 0.0679 0.417 Other_T L1
ENSG00000142856 ITGB3BP 75779 sc-eQTL 5.62e-01 -0.0352 0.0605 0.417 Other_T L1
ENSG00000203965 EFCAB7 146128 sc-eQTL 5.77e-01 -0.0522 0.0934 0.417 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 76089 sc-eQTL 3.17e-02 -0.223 0.103 0.426 B_Activated L2
ENSG00000088035 ALG6 301925 sc-eQTL 9.11e-01 -0.0112 0.1 0.426 B_Activated L2
ENSG00000116641 DOCK7 981114 sc-eQTL 9.57e-01 -0.00499 0.0932 0.426 B_Activated L2
ENSG00000125703 ATG4C 885368 sc-eQTL 2.79e-01 0.106 0.0977 0.426 B_Activated L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 8.28e-01 -0.0209 0.0958 0.426 B_Activated L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 3.11e-01 -0.0919 0.0904 0.426 B_Activated L2
ENSG00000079739 PGM1 76089 sc-eQTL 6.23e-01 -0.045 0.0915 0.416 B_Intermediate L2
ENSG00000088035 ALG6 301925 sc-eQTL 6.22e-01 0.0459 0.093 0.416 B_Intermediate L2
ENSG00000116641 DOCK7 981114 sc-eQTL 7.24e-01 0.0315 0.0888 0.416 B_Intermediate L2
ENSG00000125703 ATG4C 885368 sc-eQTL 5.15e-01 0.049 0.0751 0.416 B_Intermediate L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 9.93e-01 0.000781 0.0896 0.416 B_Intermediate L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 5.50e-01 0.0531 0.0887 0.416 B_Intermediate L2
ENSG00000079739 PGM1 76089 sc-eQTL 7.98e-01 -0.0231 0.0899 0.418 B_Memory L2
ENSG00000088035 ALG6 301925 sc-eQTL 8.15e-02 -0.159 0.0908 0.418 B_Memory L2
ENSG00000116641 DOCK7 981114 sc-eQTL 6.61e-01 0.0376 0.0857 0.418 B_Memory L2
ENSG00000125703 ATG4C 885368 sc-eQTL 1.02e-02 0.208 0.0802 0.418 B_Memory L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 5.83e-01 -0.0512 0.0932 0.418 B_Memory L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 1.54e-01 0.132 0.0921 0.418 B_Memory L2
ENSG00000079739 PGM1 76089 sc-eQTL 2.23e-02 -0.205 0.0891 0.417 B_Naive1 L2
ENSG00000088035 ALG6 301925 sc-eQTL 1.43e-01 -0.133 0.0901 0.417 B_Naive1 L2
ENSG00000116641 DOCK7 981114 sc-eQTL 4.66e-01 0.0633 0.0867 0.417 B_Naive1 L2
ENSG00000125703 ATG4C 885368 sc-eQTL 2.46e-01 0.0775 0.0666 0.417 B_Naive1 L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 6.01e-01 -0.0464 0.0886 0.417 B_Naive1 L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 9.21e-02 0.159 0.094 0.417 B_Naive1 L2
ENSG00000079739 PGM1 76089 sc-eQTL 8.17e-01 0.0205 0.0885 0.418 B_Naive2 L2
ENSG00000088035 ALG6 301925 sc-eQTL 9.96e-01 -0.000512 0.0923 0.418 B_Naive2 L2
ENSG00000116641 DOCK7 981114 sc-eQTL 8.77e-01 0.0138 0.0887 0.418 B_Naive2 L2
ENSG00000125703 ATG4C 885368 sc-eQTL 9.44e-01 -0.00598 0.0854 0.418 B_Naive2 L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 9.49e-01 -0.00596 0.0926 0.418 B_Naive2 L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 6.09e-01 0.0472 0.0921 0.418 B_Naive2 L2
ENSG00000079739 PGM1 76089 sc-eQTL 6.98e-01 0.0356 0.0915 0.411 CD4_CTL L2
ENSG00000088035 ALG6 301925 sc-eQTL 4.10e-01 0.0798 0.0966 0.411 CD4_CTL L2
ENSG00000116641 DOCK7 981114 sc-eQTL 9.39e-01 0.00651 0.0846 0.411 CD4_CTL L2
ENSG00000125703 ATG4C 885368 sc-eQTL 5.69e-01 0.0499 0.0875 0.411 CD4_CTL L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 4.91e-01 0.0645 0.0935 0.411 CD4_CTL L2
ENSG00000158966 CACHD1 -800629 sc-eQTL 5.64e-01 0.0197 0.034 0.411 CD4_CTL L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 2.78e-01 -0.0964 0.0887 0.411 CD4_CTL L2
ENSG00000079739 PGM1 76089 sc-eQTL 1.15e-01 -0.116 0.0736 0.417 CD4_Naive L2
ENSG00000088035 ALG6 301925 sc-eQTL 3.99e-01 -0.0679 0.0802 0.417 CD4_Naive L2
ENSG00000116641 DOCK7 981114 sc-eQTL 6.53e-01 -0.0355 0.079 0.417 CD4_Naive L2
ENSG00000125703 ATG4C 885368 sc-eQTL 7.80e-02 0.123 0.0693 0.417 CD4_Naive L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 2.65e-01 -0.095 0.0851 0.417 CD4_Naive L2
ENSG00000158966 CACHD1 -800629 sc-eQTL 4.31e-01 -0.0398 0.0505 0.417 CD4_Naive L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 7.33e-01 0.0289 0.0847 0.417 CD4_Naive L2
ENSG00000079739 PGM1 76089 sc-eQTL 5.99e-01 -0.04 0.076 0.417 CD4_TCM L2
ENSG00000088035 ALG6 301925 sc-eQTL 5.94e-02 0.166 0.0876 0.417 CD4_TCM L2
ENSG00000116641 DOCK7 981114 sc-eQTL 9.17e-01 -0.00816 0.0783 0.417 CD4_TCM L2
ENSG00000125703 ATG4C 885368 sc-eQTL 9.95e-01 0.000433 0.0762 0.417 CD4_TCM L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 9.37e-01 0.00714 0.0898 0.417 CD4_TCM L2
ENSG00000158966 CACHD1 -800629 sc-eQTL 7.51e-01 -0.0226 0.0712 0.417 CD4_TCM L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 9.36e-01 -0.00702 0.0869 0.417 CD4_TCM L2
ENSG00000079739 PGM1 76089 sc-eQTL 1.29e-01 0.135 0.0888 0.417 CD4_TEM L2
ENSG00000088035 ALG6 301925 sc-eQTL 7.34e-01 -0.0306 0.0897 0.417 CD4_TEM L2
ENSG00000116641 DOCK7 981114 sc-eQTL 6.44e-01 -0.0404 0.0875 0.417 CD4_TEM L2
ENSG00000125703 ATG4C 885368 sc-eQTL 5.44e-01 0.0516 0.0849 0.417 CD4_TEM L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 1.39e-01 -0.129 0.0873 0.417 CD4_TEM L2
ENSG00000158966 CACHD1 -800629 sc-eQTL 8.75e-01 -0.00851 0.0542 0.417 CD4_TEM L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 6.29e-01 0.0439 0.0908 0.417 CD4_TEM L2
ENSG00000079739 PGM1 76089 sc-eQTL 3.65e-01 -0.0747 0.0823 0.417 CD8_CTL L2
ENSG00000088035 ALG6 301925 sc-eQTL 8.47e-01 0.0169 0.0877 0.417 CD8_CTL L2
ENSG00000116641 DOCK7 981114 sc-eQTL 7.70e-01 0.0243 0.0832 0.417 CD8_CTL L2
ENSG00000125703 ATG4C 885368 sc-eQTL 2.21e-01 -0.108 0.0883 0.417 CD8_CTL L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 9.44e-02 -0.154 0.0915 0.417 CD8_CTL L2
ENSG00000158966 CACHD1 -800629 sc-eQTL 4.71e-01 0.0282 0.039 0.417 CD8_CTL L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 9.61e-01 0.00458 0.0943 0.417 CD8_CTL L2
ENSG00000079739 PGM1 76089 sc-eQTL 7.62e-01 0.0253 0.0836 0.417 CD8_Naive L2
ENSG00000088035 ALG6 301925 sc-eQTL 9.89e-01 -0.00114 0.0865 0.417 CD8_Naive L2
ENSG00000116641 DOCK7 981114 sc-eQTL 7.27e-01 0.0312 0.0894 0.417 CD8_Naive L2
ENSG00000125703 ATG4C 885368 sc-eQTL 8.60e-01 -0.0152 0.0858 0.417 CD8_Naive L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 3.20e-02 -0.186 0.086 0.417 CD8_Naive L2
ENSG00000158966 CACHD1 -800629 sc-eQTL 7.59e-01 0.0185 0.0603 0.417 CD8_Naive L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 7.27e-01 0.0286 0.0819 0.417 CD8_Naive L2
ENSG00000079739 PGM1 76089 sc-eQTL 6.50e-01 -0.0424 0.0931 0.419 CD8_TCM L2
ENSG00000088035 ALG6 301925 sc-eQTL 5.52e-01 -0.0562 0.0943 0.419 CD8_TCM L2
ENSG00000116641 DOCK7 981114 sc-eQTL 3.37e-01 0.0883 0.0918 0.419 CD8_TCM L2
ENSG00000125703 ATG4C 885368 sc-eQTL 3.77e-02 -0.195 0.0931 0.419 CD8_TCM L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 5.47e-01 -0.0552 0.0914 0.419 CD8_TCM L2
ENSG00000158966 CACHD1 -800629 sc-eQTL 6.04e-01 0.025 0.048 0.419 CD8_TCM L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 8.08e-02 -0.162 0.0925 0.419 CD8_TCM L2
ENSG00000079739 PGM1 76089 sc-eQTL 6.80e-01 -0.0394 0.0952 0.411 CD8_TEM L2
ENSG00000088035 ALG6 301925 sc-eQTL 3.66e-03 0.275 0.0935 0.411 CD8_TEM L2
ENSG00000116641 DOCK7 981114 sc-eQTL 4.02e-01 -0.0776 0.0925 0.411 CD8_TEM L2
ENSG00000125703 ATG4C 885368 sc-eQTL 5.59e-01 0.0521 0.089 0.411 CD8_TEM L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 2.19e-02 0.22 0.0951 0.411 CD8_TEM L2
ENSG00000158966 CACHD1 -800629 sc-eQTL 2.02e-01 0.025 0.0196 0.411 CD8_TEM L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 4.30e-01 0.0738 0.0933 0.411 CD8_TEM L2
ENSG00000079739 PGM1 76089 sc-eQTL 4.57e-01 -0.0663 0.089 0.413 MAIT L2
ENSG00000088035 ALG6 301925 sc-eQTL 8.55e-01 -0.0161 0.0882 0.413 MAIT L2
ENSG00000116641 DOCK7 981114 sc-eQTL 7.96e-01 0.0219 0.0845 0.413 MAIT L2
ENSG00000125703 ATG4C 885368 sc-eQTL 3.44e-01 0.0843 0.0889 0.413 MAIT L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 4.10e-01 -0.0735 0.0891 0.413 MAIT L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 9.14e-02 -0.155 0.0913 0.413 MAIT L2
ENSG00000079739 PGM1 76089 sc-eQTL 4.74e-03 -0.258 0.0904 0.418 NK_CD56bright L2
ENSG00000088035 ALG6 301925 sc-eQTL 9.63e-01 0.00434 0.0945 0.418 NK_CD56bright L2
ENSG00000116641 DOCK7 981114 sc-eQTL 3.93e-01 0.07 0.0818 0.418 NK_CD56bright L2
ENSG00000125703 ATG4C 885368 sc-eQTL 4.56e-01 0.0683 0.0914 0.418 NK_CD56bright L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 3.67e-01 -0.086 0.0951 0.418 NK_CD56bright L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 9.99e-01 0.000147 0.094 0.418 NK_CD56bright L2
ENSG00000079739 PGM1 76089 sc-eQTL 3.19e-01 -0.0702 0.0702 0.418 NK_CD56dim L2
ENSG00000088035 ALG6 301925 sc-eQTL 4.54e-02 -0.178 0.0884 0.418 NK_CD56dim L2
ENSG00000116641 DOCK7 981114 sc-eQTL 6.42e-01 0.0361 0.0776 0.418 NK_CD56dim L2
ENSG00000125703 ATG4C 885368 sc-eQTL 6.32e-01 -0.0379 0.0789 0.418 NK_CD56dim L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 3.53e-01 -0.0835 0.0896 0.418 NK_CD56dim L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 1.00e+00 3.92e-05 0.097 0.418 NK_CD56dim L2
ENSG00000079739 PGM1 76089 sc-eQTL 7.77e-01 0.0271 0.0955 0.432 NK_HLA L2
ENSG00000088035 ALG6 301925 sc-eQTL 3.04e-01 -0.102 0.0988 0.432 NK_HLA L2
ENSG00000116641 DOCK7 981114 sc-eQTL 9.49e-01 0.00489 0.0758 0.432 NK_HLA L2
ENSG00000125703 ATG4C 885368 sc-eQTL 9.47e-01 0.00588 0.0881 0.432 NK_HLA L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 9.66e-03 -0.238 0.0909 0.432 NK_HLA L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 8.18e-01 0.0203 0.0881 0.432 NK_HLA L2
ENSG00000079739 PGM1 76089 sc-eQTL 5.20e-02 -0.15 0.0768 0.418 NK_cytokine L2
ENSG00000088035 ALG6 301925 sc-eQTL 9.05e-01 -0.0105 0.0876 0.418 NK_cytokine L2
ENSG00000116641 DOCK7 981114 sc-eQTL 8.85e-01 0.0117 0.0812 0.418 NK_cytokine L2
ENSG00000125703 ATG4C 885368 sc-eQTL 7.57e-01 0.0257 0.083 0.418 NK_cytokine L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 5.74e-01 0.0484 0.0859 0.418 NK_cytokine L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 9.74e-01 -0.00301 0.0916 0.418 NK_cytokine L2
ENSG00000079739 PGM1 76089 sc-eQTL 5.75e-01 -0.059 0.105 0.407 PB L2
ENSG00000088035 ALG6 301925 sc-eQTL 2.32e-01 0.132 0.11 0.407 PB L2
ENSG00000116641 DOCK7 981114 sc-eQTL 5.96e-01 -0.0626 0.118 0.407 PB L2
ENSG00000125703 ATG4C 885368 sc-eQTL 9.28e-01 -0.00932 0.103 0.407 PB L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 9.33e-01 -0.00867 0.103 0.407 PB L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 1.44e-01 -0.164 0.112 0.407 PB L2
ENSG00000079739 PGM1 76089 sc-eQTL 2.00e-01 -0.111 0.0861 0.417 Pro_T L2
ENSG00000088035 ALG6 301925 sc-eQTL 5.66e-01 -0.0504 0.0878 0.417 Pro_T L2
ENSG00000116641 DOCK7 981114 sc-eQTL 3.84e-02 0.182 0.0873 0.417 Pro_T L2
ENSG00000125703 ATG4C 885368 sc-eQTL 9.69e-01 0.00303 0.0772 0.417 Pro_T L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 6.03e-01 0.0403 0.0774 0.417 Pro_T L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 9.06e-02 0.152 0.0894 0.417 Pro_T L2
ENSG00000079739 PGM1 76089 sc-eQTL 3.81e-01 -0.0762 0.0868 0.417 Treg L2
ENSG00000088035 ALG6 301925 sc-eQTL 3.51e-01 -0.0867 0.0928 0.417 Treg L2
ENSG00000116641 DOCK7 981114 sc-eQTL 2.81e-01 0.092 0.0852 0.417 Treg L2
ENSG00000125703 ATG4C 885368 sc-eQTL 1.37e-01 0.13 0.0868 0.417 Treg L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 4.88e-01 0.0634 0.0912 0.417 Treg L2
ENSG00000158966 CACHD1 -800629 sc-eQTL 4.80e-01 0.0487 0.0689 0.417 Treg L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 5.36e-02 0.168 0.0866 0.417 Treg L2
ENSG00000079739 PGM1 76089 sc-eQTL 5.53e-02 -0.166 0.0862 0.422 cDC L2
ENSG00000088035 ALG6 301925 sc-eQTL 4.65e-01 -0.0646 0.0882 0.422 cDC L2
ENSG00000116641 DOCK7 981114 sc-eQTL 6.96e-01 -0.0339 0.0867 0.422 cDC L2
ENSG00000125703 ATG4C 885368 sc-eQTL 9.97e-01 0.000323 0.0753 0.422 cDC L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 9.29e-01 0.00846 0.0954 0.422 cDC L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 5.36e-01 0.0475 0.0766 0.422 cDC L2
ENSG00000079739 PGM1 76089 sc-eQTL 2.37e-02 -0.184 0.0807 0.417 cMono_IL1B L2
ENSG00000088035 ALG6 301925 sc-eQTL 6.55e-01 0.0365 0.0817 0.417 cMono_IL1B L2
ENSG00000116641 DOCK7 981114 sc-eQTL 3.74e-01 -0.0767 0.086 0.417 cMono_IL1B L2
ENSG00000125703 ATG4C 885368 sc-eQTL 1.74e-01 0.0823 0.0603 0.417 cMono_IL1B L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 8.72e-01 0.0139 0.0858 0.417 cMono_IL1B L2
ENSG00000079739 PGM1 76089 sc-eQTL 3.10e-02 -0.194 0.0894 0.417 cMono_S100A L2
ENSG00000088035 ALG6 301925 sc-eQTL 8.37e-01 0.0189 0.0916 0.417 cMono_S100A L2
ENSG00000116641 DOCK7 981114 sc-eQTL 9.55e-01 0.00484 0.0849 0.417 cMono_S100A L2
ENSG00000125703 ATG4C 885368 sc-eQTL 8.73e-01 -0.0118 0.0735 0.417 cMono_S100A L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 2.56e-01 0.0943 0.0827 0.417 cMono_S100A L2
ENSG00000079739 PGM1 76089 sc-eQTL 8.38e-01 -0.0217 0.106 0.415 gdT L2
ENSG00000088035 ALG6 301925 sc-eQTL 1.48e-01 -0.163 0.112 0.415 gdT L2
ENSG00000116641 DOCK7 981114 sc-eQTL 2.16e-01 -0.137 0.11 0.415 gdT L2
ENSG00000125703 ATG4C 885368 sc-eQTL 4.52e-01 -0.0798 0.106 0.415 gdT L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 1.58e-01 -0.159 0.112 0.415 gdT L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 9.25e-01 0.0104 0.111 0.415 gdT L2
ENSG00000079739 PGM1 76089 sc-eQTL 4.44e-03 -0.263 0.0915 0.42 intMono L2
ENSG00000088035 ALG6 301925 sc-eQTL 7.01e-01 -0.0334 0.0869 0.42 intMono L2
ENSG00000116641 DOCK7 981114 sc-eQTL 1.07e-01 0.143 0.0882 0.42 intMono L2
ENSG00000125703 ATG4C 885368 sc-eQTL 8.90e-01 -0.0117 0.0847 0.42 intMono L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 5.67e-01 -0.0535 0.0933 0.42 intMono L2
ENSG00000079739 PGM1 76089 sc-eQTL 2.42e-01 0.0988 0.0843 0.412 ncMono L2
ENSG00000088035 ALG6 301925 sc-eQTL 1.32e-01 0.14 0.0924 0.412 ncMono L2
ENSG00000116641 DOCK7 981114 sc-eQTL 4.12e-01 0.075 0.0913 0.412 ncMono L2
ENSG00000125703 ATG4C 885368 sc-eQTL 5.72e-01 0.0483 0.0853 0.412 ncMono L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 8.43e-01 0.0178 0.0893 0.412 ncMono L2
ENSG00000079739 PGM1 76089 sc-eQTL 3.66e-01 -0.0913 0.101 0.438 pDC L2
ENSG00000088035 ALG6 301925 sc-eQTL 5.78e-01 -0.0549 0.0983 0.438 pDC L2
ENSG00000116641 DOCK7 981114 sc-eQTL 6.78e-01 -0.0418 0.1 0.438 pDC L2
ENSG00000125703 ATG4C 885368 sc-eQTL 2.07e-01 0.114 0.0897 0.438 pDC L2
ENSG00000142856 ITGB3BP 75779 sc-eQTL 6.21e-02 0.188 0.1 0.438 pDC L2
ENSG00000203965 EFCAB7 146128 sc-eQTL 9.83e-01 0.00196 0.0896 0.438 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 76089 sc-eQTL 8.73e-02 -0.146 0.0849 0.417 B_Memory LOneK1K
ENSG00000088035 ALG6 301925 sc-eQTL 5.95e-01 -0.0503 0.0945 0.417 B_Memory LOneK1K
ENSG00000116641 DOCK7 981114 sc-eQTL 6.04e-01 0.0426 0.082 0.417 B_Memory LOneK1K
ENSG00000125703 ATG4C 885368 sc-eQTL 3.50e-02 0.139 0.0656 0.417 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 75779 sc-eQTL 6.72e-01 -0.0369 0.0871 0.417 B_Memory LOneK1K
ENSG00000203965 EFCAB7 146128 sc-eQTL 2.54e-01 0.104 0.0905 0.417 B_Memory LOneK1K
ENSG00000079739 PGM1 76089 sc-eQTL 5.34e-02 -0.17 0.0874 0.417 B_Naive LOneK1K
ENSG00000088035 ALG6 301925 sc-eQTL 1.98e-01 -0.117 0.0904 0.417 B_Naive LOneK1K
ENSG00000116641 DOCK7 981114 sc-eQTL 5.17e-01 0.0549 0.0847 0.417 B_Naive LOneK1K
ENSG00000125703 ATG4C 885368 sc-eQTL 7.74e-01 0.0186 0.0647 0.417 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 75779 sc-eQTL 8.76e-01 -0.0142 0.0914 0.417 B_Naive LOneK1K
ENSG00000203965 EFCAB7 146128 sc-eQTL 1.82e-01 0.123 0.0915 0.417 B_Naive LOneK1K
ENSG00000079739 PGM1 76089 sc-eQTL 1.08e-02 -0.212 0.0824 0.417 CD14_Mono LOneK1K
ENSG00000088035 ALG6 301925 sc-eQTL 5.94e-01 0.0433 0.081 0.417 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 981114 sc-eQTL 5.60e-01 -0.0476 0.0815 0.417 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 885368 sc-eQTL 4.29e-01 0.0446 0.0563 0.417 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 75779 sc-eQTL 5.78e-01 0.0465 0.0834 0.417 CD14_Mono LOneK1K
ENSG00000079739 PGM1 76089 sc-eQTL 2.83e-01 -0.0875 0.0812 0.42 CD16_Mono LOneK1K
ENSG00000088035 ALG6 301925 sc-eQTL 6.26e-01 0.045 0.0924 0.42 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 981114 sc-eQTL 7.08e-02 0.165 0.0908 0.42 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 885368 sc-eQTL 7.20e-01 0.028 0.078 0.42 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 75779 sc-eQTL 9.92e-01 0.000933 0.0906 0.42 CD16_Mono LOneK1K
ENSG00000079739 PGM1 76089 sc-eQTL 1.69e-01 -0.0939 0.068 0.418 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 301925 sc-eQTL 8.84e-02 -0.139 0.0814 0.418 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 981114 sc-eQTL 9.13e-01 0.00804 0.0734 0.418 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 885368 sc-eQTL 9.17e-01 -0.00764 0.0733 0.418 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 75779 sc-eQTL 4.67e-01 -0.0632 0.0868 0.418 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 146128 sc-eQTL 7.44e-01 0.0314 0.0959 0.418 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000088035 ALG6 301925 eQTL 0.0481 0.0258 0.013 0.0 0.0 0.443

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina