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Genes within 1Mb (chr1:63663087:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 69676 sc-eQTL 1.22e-01 -0.119 0.0766 0.5 B L1
ENSG00000088035 ALG6 295512 sc-eQTL 8.63e-01 0.0138 0.0798 0.5 B L1
ENSG00000116641 DOCK7 974701 sc-eQTL 2.69e-01 0.0881 0.0796 0.5 B L1
ENSG00000125703 ATG4C 878955 sc-eQTL 2.70e-01 0.0612 0.0553 0.5 B L1
ENSG00000142856 ITGB3BP 69366 sc-eQTL 5.39e-01 -0.0543 0.0882 0.5 B L1
ENSG00000203965 EFCAB7 139715 sc-eQTL 8.87e-02 0.154 0.0898 0.5 B L1
ENSG00000079739 PGM1 69676 sc-eQTL 1.23e-01 -0.102 0.0656 0.5 CD4T L1
ENSG00000088035 ALG6 295512 sc-eQTL 8.50e-01 0.0138 0.0728 0.5 CD4T L1
ENSG00000116641 DOCK7 974701 sc-eQTL 4.04e-01 -0.0615 0.0736 0.5 CD4T L1
ENSG00000125703 ATG4C 878955 sc-eQTL 4.19e-01 0.0481 0.0594 0.5 CD4T L1
ENSG00000142856 ITGB3BP 69366 sc-eQTL 4.54e-01 -0.0633 0.0843 0.5 CD4T L1
ENSG00000158966 CACHD1 -807042 sc-eQTL 2.14e-01 -0.0626 0.0502 0.5 CD4T L1
ENSG00000203965 EFCAB7 139715 sc-eQTL 7.68e-01 0.0224 0.0758 0.5 CD4T L1
ENSG00000079739 PGM1 69676 sc-eQTL 7.42e-01 0.024 0.0728 0.5 CD8T L1
ENSG00000088035 ALG6 295512 sc-eQTL 6.50e-01 0.0364 0.0803 0.5 CD8T L1
ENSG00000116641 DOCK7 974701 sc-eQTL 5.87e-01 0.0442 0.0813 0.5 CD8T L1
ENSG00000125703 ATG4C 878955 sc-eQTL 2.66e-01 -0.086 0.0771 0.5 CD8T L1
ENSG00000142856 ITGB3BP 69366 sc-eQTL 1.85e-01 -0.114 0.0861 0.5 CD8T L1
ENSG00000158966 CACHD1 -807042 sc-eQTL 9.88e-01 0.000651 0.0437 0.5 CD8T L1
ENSG00000203965 EFCAB7 139715 sc-eQTL 8.44e-01 -0.017 0.0861 0.5 CD8T L1
ENSG00000079739 PGM1 69676 sc-eQTL 1.05e-01 -0.133 0.0813 0.511 DC L1
ENSG00000088035 ALG6 295512 sc-eQTL 1.76e-01 -0.114 0.0841 0.511 DC L1
ENSG00000116641 DOCK7 974701 sc-eQTL 9.75e-01 -0.00276 0.0866 0.511 DC L1
ENSG00000125703 ATG4C 878955 sc-eQTL 2.34e-01 0.0806 0.0675 0.511 DC L1
ENSG00000142856 ITGB3BP 69366 sc-eQTL 4.29e-01 0.075 0.0946 0.511 DC L1
ENSG00000203965 EFCAB7 139715 sc-eQTL 5.46e-01 0.0499 0.0824 0.511 DC L1
ENSG00000079739 PGM1 69676 sc-eQTL 3.07e-03 -0.232 0.0775 0.5 Mono L1
ENSG00000088035 ALG6 295512 sc-eQTL 4.12e-01 0.0677 0.0824 0.5 Mono L1
ENSG00000116641 DOCK7 974701 sc-eQTL 3.71e-01 0.0715 0.0797 0.5 Mono L1
ENSG00000125703 ATG4C 878955 sc-eQTL 5.35e-01 0.0335 0.0539 0.5 Mono L1
ENSG00000142856 ITGB3BP 69366 sc-eQTL 7.48e-01 0.0274 0.0853 0.5 Mono L1
ENSG00000079739 PGM1 69676 sc-eQTL 4.86e-01 -0.0473 0.0678 0.502 NK L1
ENSG00000088035 ALG6 295512 sc-eQTL 3.54e-01 -0.0737 0.0794 0.502 NK L1
ENSG00000116641 DOCK7 974701 sc-eQTL 6.51e-02 0.121 0.065 0.502 NK L1
ENSG00000125703 ATG4C 878955 sc-eQTL 4.92e-01 0.0484 0.0703 0.502 NK L1
ENSG00000142856 ITGB3BP 69366 sc-eQTL 6.80e-01 -0.0361 0.0874 0.502 NK L1
ENSG00000203965 EFCAB7 139715 sc-eQTL 8.72e-01 -0.0153 0.095 0.502 NK L1
ENSG00000079739 PGM1 69676 sc-eQTL 7.05e-01 -0.0293 0.0774 0.5 Other_T L1
ENSG00000088035 ALG6 295512 sc-eQTL 1.00e-01 -0.128 0.0773 0.5 Other_T L1
ENSG00000116641 DOCK7 974701 sc-eQTL 7.04e-01 0.0302 0.0794 0.5 Other_T L1
ENSG00000125703 ATG4C 878955 sc-eQTL 2.55e-01 0.0783 0.0685 0.5 Other_T L1
ENSG00000142856 ITGB3BP 69366 sc-eQTL 7.66e-02 -0.108 0.0605 0.5 Other_T L1
ENSG00000203965 EFCAB7 139715 sc-eQTL 4.75e-01 -0.0672 0.094 0.5 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 69676 sc-eQTL 2.28e-01 -0.126 0.104 0.503 B_Activated L2
ENSG00000088035 ALG6 295512 sc-eQTL 4.39e-01 -0.0778 0.1 0.503 B_Activated L2
ENSG00000116641 DOCK7 974701 sc-eQTL 5.77e-01 -0.0522 0.0934 0.503 B_Activated L2
ENSG00000125703 ATG4C 878955 sc-eQTL 1.03e-01 0.16 0.0976 0.503 B_Activated L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 9.64e-01 -0.0043 0.0961 0.503 B_Activated L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 1.34e-01 -0.136 0.0903 0.503 B_Activated L2
ENSG00000079739 PGM1 69676 sc-eQTL 3.99e-01 -0.0785 0.0929 0.5 B_Intermediate L2
ENSG00000088035 ALG6 295512 sc-eQTL 6.18e-01 0.0472 0.0945 0.5 B_Intermediate L2
ENSG00000116641 DOCK7 974701 sc-eQTL 1.40e-01 0.133 0.0898 0.5 B_Intermediate L2
ENSG00000125703 ATG4C 878955 sc-eQTL 5.74e-01 0.043 0.0764 0.5 B_Intermediate L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 4.17e-01 -0.0739 0.0909 0.5 B_Intermediate L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 1.89e-01 0.118 0.0898 0.5 B_Intermediate L2
ENSG00000079739 PGM1 69676 sc-eQTL 9.19e-01 0.0093 0.091 0.502 B_Memory L2
ENSG00000088035 ALG6 295512 sc-eQTL 2.14e-01 -0.115 0.0922 0.502 B_Memory L2
ENSG00000116641 DOCK7 974701 sc-eQTL 8.04e-01 -0.0215 0.0867 0.502 B_Memory L2
ENSG00000125703 ATG4C 878955 sc-eQTL 8.15e-02 0.143 0.0819 0.502 B_Memory L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 4.71e-01 -0.0681 0.0942 0.502 B_Memory L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 4.91e-01 0.0645 0.0936 0.502 B_Memory L2
ENSG00000079739 PGM1 69676 sc-eQTL 1.25e-01 -0.141 0.0918 0.5 B_Naive1 L2
ENSG00000088035 ALG6 295512 sc-eQTL 3.64e-01 -0.0842 0.0925 0.5 B_Naive1 L2
ENSG00000116641 DOCK7 974701 sc-eQTL 1.66e-01 0.123 0.0884 0.5 B_Naive1 L2
ENSG00000125703 ATG4C 878955 sc-eQTL 4.63e-01 0.0502 0.0683 0.5 B_Naive1 L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 5.61e-01 -0.0527 0.0906 0.5 B_Naive1 L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 8.55e-03 0.253 0.0952 0.5 B_Naive1 L2
ENSG00000079739 PGM1 69676 sc-eQTL 7.09e-01 0.0337 0.0903 0.502 B_Naive2 L2
ENSG00000088035 ALG6 295512 sc-eQTL 3.09e-01 0.0958 0.094 0.502 B_Naive2 L2
ENSG00000116641 DOCK7 974701 sc-eQTL 9.40e-01 0.00687 0.0906 0.502 B_Naive2 L2
ENSG00000125703 ATG4C 878955 sc-eQTL 7.89e-01 -0.0234 0.0872 0.502 B_Naive2 L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 6.11e-01 0.0481 0.0945 0.502 B_Naive2 L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 1.34e-01 0.141 0.0936 0.502 B_Naive2 L2
ENSG00000079739 PGM1 69676 sc-eQTL 7.35e-01 -0.031 0.0917 0.495 CD4_CTL L2
ENSG00000088035 ALG6 295512 sc-eQTL 7.97e-01 0.025 0.097 0.495 CD4_CTL L2
ENSG00000116641 DOCK7 974701 sc-eQTL 8.61e-01 0.0148 0.0848 0.495 CD4_CTL L2
ENSG00000125703 ATG4C 878955 sc-eQTL 2.67e-01 0.0973 0.0875 0.495 CD4_CTL L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 9.64e-01 -0.00422 0.0938 0.495 CD4_CTL L2
ENSG00000158966 CACHD1 -807042 sc-eQTL 5.47e-01 0.0206 0.0341 0.495 CD4_CTL L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 5.67e-01 -0.0511 0.0891 0.495 CD4_CTL L2
ENSG00000079739 PGM1 69676 sc-eQTL 1.75e-02 -0.176 0.0734 0.5 CD4_Naive L2
ENSG00000088035 ALG6 295512 sc-eQTL 2.32e-01 -0.0966 0.0805 0.5 CD4_Naive L2
ENSG00000116641 DOCK7 974701 sc-eQTL 7.05e-01 -0.0301 0.0794 0.5 CD4_Naive L2
ENSG00000125703 ATG4C 878955 sc-eQTL 2.02e-01 0.0895 0.0699 0.5 CD4_Naive L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 3.69e-01 -0.0772 0.0856 0.5 CD4_Naive L2
ENSG00000158966 CACHD1 -807042 sc-eQTL 1.08e-01 -0.0815 0.0505 0.5 CD4_Naive L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 6.45e-01 0.0393 0.0851 0.5 CD4_Naive L2
ENSG00000079739 PGM1 69676 sc-eQTL 7.57e-01 -0.0236 0.076 0.5 CD4_TCM L2
ENSG00000088035 ALG6 295512 sc-eQTL 6.09e-02 0.165 0.0876 0.5 CD4_TCM L2
ENSG00000116641 DOCK7 974701 sc-eQTL 7.89e-01 -0.021 0.0782 0.5 CD4_TCM L2
ENSG00000125703 ATG4C 878955 sc-eQTL 9.41e-01 -0.00564 0.0762 0.5 CD4_TCM L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 9.06e-01 0.0107 0.0898 0.5 CD4_TCM L2
ENSG00000158966 CACHD1 -807042 sc-eQTL 7.29e-01 -0.0247 0.0712 0.5 CD4_TCM L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 1.85e-01 -0.115 0.0866 0.5 CD4_TCM L2
ENSG00000079739 PGM1 69676 sc-eQTL 1.22e-01 0.138 0.0891 0.5 CD4_TEM L2
ENSG00000088035 ALG6 295512 sc-eQTL 4.99e-01 -0.0609 0.09 0.5 CD4_TEM L2
ENSG00000116641 DOCK7 974701 sc-eQTL 4.65e-01 -0.0642 0.0877 0.5 CD4_TEM L2
ENSG00000125703 ATG4C 878955 sc-eQTL 8.57e-01 0.0153 0.0853 0.5 CD4_TEM L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 1.03e-01 -0.143 0.0875 0.5 CD4_TEM L2
ENSG00000158966 CACHD1 -807042 sc-eQTL 6.69e-01 -0.0233 0.0544 0.5 CD4_TEM L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 4.14e-01 0.0746 0.0911 0.5 CD4_TEM L2
ENSG00000079739 PGM1 69676 sc-eQTL 4.24e-01 -0.0659 0.0824 0.5 CD8_CTL L2
ENSG00000088035 ALG6 295512 sc-eQTL 9.89e-01 -0.00122 0.0877 0.5 CD8_CTL L2
ENSG00000116641 DOCK7 974701 sc-eQTL 4.38e-01 0.0646 0.0831 0.5 CD8_CTL L2
ENSG00000125703 ATG4C 878955 sc-eQTL 2.13e-01 -0.11 0.0883 0.5 CD8_CTL L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 2.85e-02 -0.201 0.0911 0.5 CD8_CTL L2
ENSG00000158966 CACHD1 -807042 sc-eQTL 8.54e-01 0.00722 0.0391 0.5 CD8_CTL L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 9.89e-01 -0.00132 0.0944 0.5 CD8_CTL L2
ENSG00000079739 PGM1 69676 sc-eQTL 6.91e-01 0.0337 0.0847 0.5 CD8_Naive L2
ENSG00000088035 ALG6 295512 sc-eQTL 9.70e-01 0.00326 0.0877 0.5 CD8_Naive L2
ENSG00000116641 DOCK7 974701 sc-eQTL 5.97e-01 0.0479 0.0906 0.5 CD8_Naive L2
ENSG00000125703 ATG4C 878955 sc-eQTL 6.51e-01 -0.0394 0.087 0.5 CD8_Naive L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 2.55e-01 -0.1 0.0878 0.5 CD8_Naive L2
ENSG00000158966 CACHD1 -807042 sc-eQTL 2.75e-01 -0.0666 0.0609 0.5 CD8_Naive L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 4.35e-01 0.0649 0.0829 0.5 CD8_Naive L2
ENSG00000079739 PGM1 69676 sc-eQTL 5.10e-01 0.0616 0.0935 0.507 CD8_TCM L2
ENSG00000088035 ALG6 295512 sc-eQTL 6.90e-01 -0.0378 0.0947 0.507 CD8_TCM L2
ENSG00000116641 DOCK7 974701 sc-eQTL 3.10e-01 0.0939 0.0922 0.507 CD8_TCM L2
ENSG00000125703 ATG4C 878955 sc-eQTL 9.29e-01 -0.0085 0.0946 0.507 CD8_TCM L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 8.88e-01 0.013 0.0919 0.507 CD8_TCM L2
ENSG00000158966 CACHD1 -807042 sc-eQTL 3.68e-01 -0.0434 0.0482 0.507 CD8_TCM L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 2.94e-01 -0.0984 0.0934 0.507 CD8_TCM L2
ENSG00000079739 PGM1 69676 sc-eQTL 9.79e-01 0.00248 0.0942 0.498 CD8_TEM L2
ENSG00000088035 ALG6 295512 sc-eQTL 3.53e-02 0.198 0.0935 0.498 CD8_TEM L2
ENSG00000116641 DOCK7 974701 sc-eQTL 9.06e-01 -0.0109 0.0917 0.498 CD8_TEM L2
ENSG00000125703 ATG4C 878955 sc-eQTL 6.60e-01 -0.0388 0.0881 0.498 CD8_TEM L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 2.54e-01 0.109 0.0951 0.498 CD8_TEM L2
ENSG00000158966 CACHD1 -807042 sc-eQTL 2.64e-01 0.0217 0.0194 0.498 CD8_TEM L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 5.25e-01 0.0588 0.0924 0.498 CD8_TEM L2
ENSG00000079739 PGM1 69676 sc-eQTL 5.61e-01 0.0516 0.0886 0.498 MAIT L2
ENSG00000088035 ALG6 295512 sc-eQTL 8.18e-01 -0.0202 0.0878 0.498 MAIT L2
ENSG00000116641 DOCK7 974701 sc-eQTL 7.44e-01 0.0275 0.0841 0.498 MAIT L2
ENSG00000125703 ATG4C 878955 sc-eQTL 5.62e-01 0.0515 0.0886 0.498 MAIT L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 2.20e-01 -0.109 0.0885 0.498 MAIT L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 2.42e-01 -0.107 0.0912 0.498 MAIT L2
ENSG00000079739 PGM1 69676 sc-eQTL 3.86e-02 -0.192 0.0924 0.507 NK_CD56bright L2
ENSG00000088035 ALG6 295512 sc-eQTL 9.40e-01 -0.00723 0.0958 0.507 NK_CD56bright L2
ENSG00000116641 DOCK7 974701 sc-eQTL 3.43e-02 0.175 0.0821 0.507 NK_CD56bright L2
ENSG00000125703 ATG4C 878955 sc-eQTL 5.88e-01 0.0502 0.0926 0.507 NK_CD56bright L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 9.65e-01 -0.00425 0.0965 0.507 NK_CD56bright L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 9.41e-01 -0.00701 0.0952 0.507 NK_CD56bright L2
ENSG00000079739 PGM1 69676 sc-eQTL 7.53e-01 -0.0223 0.0708 0.502 NK_CD56dim L2
ENSG00000088035 ALG6 295512 sc-eQTL 1.87e-01 -0.119 0.0895 0.502 NK_CD56dim L2
ENSG00000116641 DOCK7 974701 sc-eQTL 2.35e-01 0.0928 0.0779 0.502 NK_CD56dim L2
ENSG00000125703 ATG4C 878955 sc-eQTL 8.45e-01 -0.0155 0.0794 0.502 NK_CD56dim L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 7.15e-01 -0.0331 0.0903 0.502 NK_CD56dim L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 7.93e-01 -0.0257 0.0976 0.502 NK_CD56dim L2
ENSG00000079739 PGM1 69676 sc-eQTL 3.90e-01 0.0822 0.0953 0.514 NK_HLA L2
ENSG00000088035 ALG6 295512 sc-eQTL 6.21e-01 -0.049 0.099 0.514 NK_HLA L2
ENSG00000116641 DOCK7 974701 sc-eQTL 6.91e-01 -0.0301 0.0757 0.514 NK_HLA L2
ENSG00000125703 ATG4C 878955 sc-eQTL 1.52e-01 0.126 0.0876 0.514 NK_HLA L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 4.15e-02 -0.188 0.0915 0.514 NK_HLA L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 8.54e-01 0.0162 0.0881 0.514 NK_HLA L2
ENSG00000079739 PGM1 69676 sc-eQTL 5.81e-01 -0.043 0.0778 0.502 NK_cytokine L2
ENSG00000088035 ALG6 295512 sc-eQTL 7.10e-01 -0.0327 0.088 0.502 NK_cytokine L2
ENSG00000116641 DOCK7 974701 sc-eQTL 1.02e-01 0.133 0.081 0.502 NK_cytokine L2
ENSG00000125703 ATG4C 878955 sc-eQTL 5.84e-01 0.0458 0.0833 0.502 NK_cytokine L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 8.07e-01 0.0211 0.0864 0.502 NK_cytokine L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 4.77e-01 -0.0655 0.0919 0.502 NK_cytokine L2
ENSG00000079739 PGM1 69676 sc-eQTL 1.92e-01 -0.144 0.11 0.481 PB L2
ENSG00000088035 ALG6 295512 sc-eQTL 2.44e-01 0.136 0.116 0.481 PB L2
ENSG00000116641 DOCK7 974701 sc-eQTL 2.68e-01 -0.138 0.124 0.481 PB L2
ENSG00000125703 ATG4C 878955 sc-eQTL 7.72e-01 -0.0315 0.109 0.481 PB L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 9.14e-01 0.0118 0.108 0.481 PB L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 1.30e-01 -0.18 0.118 0.481 PB L2
ENSG00000079739 PGM1 69676 sc-eQTL 4.64e-01 -0.0647 0.0883 0.5 Pro_T L2
ENSG00000088035 ALG6 295512 sc-eQTL 4.66e-01 -0.0656 0.0898 0.5 Pro_T L2
ENSG00000116641 DOCK7 974701 sc-eQTL 6.82e-02 0.164 0.0895 0.5 Pro_T L2
ENSG00000125703 ATG4C 878955 sc-eQTL 8.53e-01 0.0147 0.079 0.5 Pro_T L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 8.58e-01 -0.0142 0.0792 0.5 Pro_T L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 8.10e-01 0.0221 0.092 0.5 Pro_T L2
ENSG00000079739 PGM1 69676 sc-eQTL 7.02e-01 -0.0334 0.0873 0.5 Treg L2
ENSG00000088035 ALG6 295512 sc-eQTL 7.80e-01 0.0261 0.0933 0.5 Treg L2
ENSG00000116641 DOCK7 974701 sc-eQTL 4.58e-01 0.0636 0.0856 0.5 Treg L2
ENSG00000125703 ATG4C 878955 sc-eQTL 9.00e-02 0.148 0.087 0.5 Treg L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 5.85e-01 0.0501 0.0915 0.5 Treg L2
ENSG00000158966 CACHD1 -807042 sc-eQTL 4.08e-01 0.0573 0.0691 0.5 Treg L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 3.30e-01 0.0854 0.0874 0.5 Treg L2
ENSG00000079739 PGM1 69676 sc-eQTL 1.72e-02 -0.209 0.0867 0.51 cDC L2
ENSG00000088035 ALG6 295512 sc-eQTL 4.75e-01 -0.0639 0.0892 0.51 cDC L2
ENSG00000116641 DOCK7 974701 sc-eQTL 8.39e-01 -0.0178 0.0876 0.51 cDC L2
ENSG00000125703 ATG4C 878955 sc-eQTL 7.43e-01 0.025 0.0761 0.51 cDC L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 5.17e-01 0.0625 0.0964 0.51 cDC L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 8.53e-01 -0.0144 0.0775 0.51 cDC L2
ENSG00000079739 PGM1 69676 sc-eQTL 9.72e-03 -0.211 0.0808 0.5 cMono_IL1B L2
ENSG00000088035 ALG6 295512 sc-eQTL 5.32e-01 0.0514 0.0821 0.5 cMono_IL1B L2
ENSG00000116641 DOCK7 974701 sc-eQTL 6.38e-01 0.0408 0.0866 0.5 cMono_IL1B L2
ENSG00000125703 ATG4C 878955 sc-eQTL 1.68e-01 0.0838 0.0607 0.5 cMono_IL1B L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 7.33e-01 -0.0295 0.0863 0.5 cMono_IL1B L2
ENSG00000079739 PGM1 69676 sc-eQTL 1.83e-02 -0.213 0.0894 0.5 cMono_S100A L2
ENSG00000088035 ALG6 295512 sc-eQTL 3.02e-01 0.0948 0.0916 0.5 cMono_S100A L2
ENSG00000116641 DOCK7 974701 sc-eQTL 4.49e-01 0.0645 0.085 0.5 cMono_S100A L2
ENSG00000125703 ATG4C 878955 sc-eQTL 5.21e-01 -0.0473 0.0736 0.5 cMono_S100A L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 2.06e-01 0.105 0.0828 0.5 cMono_S100A L2
ENSG00000079739 PGM1 69676 sc-eQTL 2.05e-01 0.131 0.103 0.515 gdT L2
ENSG00000088035 ALG6 295512 sc-eQTL 3.78e-01 -0.0973 0.11 0.515 gdT L2
ENSG00000116641 DOCK7 974701 sc-eQTL 3.06e-01 -0.111 0.108 0.515 gdT L2
ENSG00000125703 ATG4C 878955 sc-eQTL 6.30e-01 0.0499 0.103 0.515 gdT L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 5.01e-02 -0.214 0.108 0.515 gdT L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 9.03e-01 -0.0132 0.108 0.515 gdT L2
ENSG00000079739 PGM1 69676 sc-eQTL 2.31e-03 -0.28 0.0906 0.504 intMono L2
ENSG00000088035 ALG6 295512 sc-eQTL 2.54e-01 -0.0984 0.0861 0.504 intMono L2
ENSG00000116641 DOCK7 974701 sc-eQTL 5.18e-01 0.0571 0.0881 0.504 intMono L2
ENSG00000125703 ATG4C 878955 sc-eQTL 7.65e-01 0.0252 0.0842 0.504 intMono L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 7.11e-01 0.0344 0.0927 0.504 intMono L2
ENSG00000079739 PGM1 69676 sc-eQTL 7.56e-01 0.0268 0.0859 0.505 ncMono L2
ENSG00000088035 ALG6 295512 sc-eQTL 6.28e-01 0.0458 0.0944 0.505 ncMono L2
ENSG00000116641 DOCK7 974701 sc-eQTL 5.04e-01 0.0621 0.0928 0.505 ncMono L2
ENSG00000125703 ATG4C 878955 sc-eQTL 5.33e-01 0.0541 0.0867 0.505 ncMono L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 9.71e-01 -0.00331 0.0908 0.505 ncMono L2
ENSG00000079739 PGM1 69676 sc-eQTL 4.61e-01 -0.0741 0.1 0.525 pDC L2
ENSG00000088035 ALG6 295512 sc-eQTL 4.06e-01 -0.0813 0.0975 0.525 pDC L2
ENSG00000116641 DOCK7 974701 sc-eQTL 5.99e-01 -0.0525 0.0997 0.525 pDC L2
ENSG00000125703 ATG4C 878955 sc-eQTL 2.66e-01 0.0995 0.0892 0.525 pDC L2
ENSG00000142856 ITGB3BP 69366 sc-eQTL 1.46e-01 0.146 0.0998 0.525 pDC L2
ENSG00000203965 EFCAB7 139715 sc-eQTL 7.51e-01 0.0282 0.0889 0.525 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 69676 sc-eQTL 8.26e-02 -0.151 0.0867 0.5 B_Memory LOneK1K
ENSG00000088035 ALG6 295512 sc-eQTL 8.69e-01 -0.016 0.0965 0.5 B_Memory LOneK1K
ENSG00000116641 DOCK7 974701 sc-eQTL 3.61e-01 0.0765 0.0836 0.5 B_Memory LOneK1K
ENSG00000125703 ATG4C 878955 sc-eQTL 1.35e-01 0.101 0.0674 0.5 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 69366 sc-eQTL 3.78e-01 -0.0785 0.0888 0.5 B_Memory LOneK1K
ENSG00000203965 EFCAB7 139715 sc-eQTL 3.99e-01 0.0782 0.0926 0.5 B_Memory LOneK1K
ENSG00000079739 PGM1 69676 sc-eQTL 2.13e-01 -0.112 0.0897 0.5 B_Naive LOneK1K
ENSG00000088035 ALG6 295512 sc-eQTL 8.52e-01 -0.0173 0.0927 0.5 B_Naive LOneK1K
ENSG00000116641 DOCK7 974701 sc-eQTL 3.15e-01 0.087 0.0864 0.5 B_Naive LOneK1K
ENSG00000125703 ATG4C 878955 sc-eQTL 9.95e-01 0.000413 0.0661 0.5 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 69366 sc-eQTL 7.89e-01 -0.0251 0.0934 0.5 B_Naive LOneK1K
ENSG00000203965 EFCAB7 139715 sc-eQTL 5.44e-03 0.259 0.0922 0.5 B_Naive LOneK1K
ENSG00000079739 PGM1 69676 sc-eQTL 6.15e-03 -0.228 0.0824 0.5 CD14_Mono LOneK1K
ENSG00000088035 ALG6 295512 sc-eQTL 2.45e-01 0.0944 0.081 0.5 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 974701 sc-eQTL 4.80e-01 0.0578 0.0817 0.5 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 878955 sc-eQTL 7.43e-01 0.0186 0.0566 0.5 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 69366 sc-eQTL 9.60e-01 0.00421 0.0837 0.5 CD14_Mono LOneK1K
ENSG00000079739 PGM1 69676 sc-eQTL 1.96e-01 -0.106 0.082 0.504 CD16_Mono LOneK1K
ENSG00000088035 ALG6 295512 sc-eQTL 6.50e-01 -0.0424 0.0934 0.504 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 974701 sc-eQTL 2.74e-01 0.101 0.0922 0.504 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 878955 sc-eQTL 4.52e-01 0.0593 0.0787 0.504 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 69366 sc-eQTL 5.75e-01 0.0514 0.0915 0.504 CD16_Mono LOneK1K
ENSG00000079739 PGM1 69676 sc-eQTL 9.41e-01 -0.00514 0.0689 0.502 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 295512 sc-eQTL 2.55e-01 -0.0942 0.0825 0.502 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 974701 sc-eQTL 2.29e-01 0.0892 0.0739 0.502 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 878955 sc-eQTL 5.76e-01 0.0415 0.0739 0.502 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 69366 sc-eQTL 7.20e-01 -0.0314 0.0877 0.502 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 139715 sc-eQTL 9.04e-01 -0.0117 0.0968 0.502 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 69676 eQTL 0.0298 0.0382 0.0175 0.0 0.0 0.481
ENSG00000088035 ALG6 295512 eQTL 0.0174 0.031 0.013 0.0 0.0 0.481

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina