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Genes within 1Mb (chr1:63647741:T:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 54330 sc-eQTL 7.94e-01 -0.0207 0.0792 0.53 B L1
ENSG00000088035 ALG6 280166 sc-eQTL 3.20e-01 -0.0816 0.0819 0.53 B L1
ENSG00000116641 DOCK7 959355 sc-eQTL 6.95e-02 0.149 0.0814 0.53 B L1
ENSG00000125703 ATG4C 863609 sc-eQTL 8.89e-01 -0.008 0.057 0.53 B L1
ENSG00000142856 ITGB3BP 54020 sc-eQTL 9.00e-01 -0.0114 0.0908 0.53 B L1
ENSG00000203965 EFCAB7 124369 sc-eQTL 1.57e-01 0.131 0.0925 0.53 B L1
ENSG00000079739 PGM1 54330 sc-eQTL 8.08e-01 0.0166 0.0683 0.53 CD4T L1
ENSG00000088035 ALG6 280166 sc-eQTL 5.41e-01 0.0462 0.0754 0.53 CD4T L1
ENSG00000116641 DOCK7 959355 sc-eQTL 7.03e-01 -0.0292 0.0763 0.53 CD4T L1
ENSG00000125703 ATG4C 863609 sc-eQTL 5.20e-01 0.0396 0.0616 0.53 CD4T L1
ENSG00000142856 ITGB3BP 54020 sc-eQTL 5.45e-01 0.053 0.0874 0.53 CD4T L1
ENSG00000158966 CACHD1 -822388 sc-eQTL 3.55e-01 0.0483 0.0521 0.53 CD4T L1
ENSG00000203965 EFCAB7 124369 sc-eQTL 2.15e-01 0.0973 0.0783 0.53 CD4T L1
ENSG00000079739 PGM1 54330 sc-eQTL 1.25e-01 0.116 0.0753 0.53 CD8T L1
ENSG00000088035 ALG6 280166 sc-eQTL 1.48e-01 0.121 0.083 0.53 CD8T L1
ENSG00000116641 DOCK7 959355 sc-eQTL 3.34e-01 0.0817 0.0844 0.53 CD8T L1
ENSG00000125703 ATG4C 863609 sc-eQTL 4.89e-01 -0.0557 0.0802 0.53 CD8T L1
ENSG00000142856 ITGB3BP 54020 sc-eQTL 7.72e-01 -0.026 0.0898 0.53 CD8T L1
ENSG00000158966 CACHD1 -822388 sc-eQTL 3.25e-02 0.0968 0.045 0.53 CD8T L1
ENSG00000203965 EFCAB7 124369 sc-eQTL 3.50e-01 0.0838 0.0894 0.53 CD8T L1
ENSG00000079739 PGM1 54330 sc-eQTL 2.99e-01 -0.0901 0.0866 0.543 DC L1
ENSG00000088035 ALG6 280166 sc-eQTL 6.18e-01 -0.0447 0.0895 0.543 DC L1
ENSG00000116641 DOCK7 959355 sc-eQTL 7.81e-01 -0.0256 0.0918 0.543 DC L1
ENSG00000125703 ATG4C 863609 sc-eQTL 8.13e-01 0.017 0.0718 0.543 DC L1
ENSG00000142856 ITGB3BP 54020 sc-eQTL 4.44e-01 -0.0769 0.1 0.543 DC L1
ENSG00000203965 EFCAB7 124369 sc-eQTL 6.17e-01 -0.0437 0.0874 0.543 DC L1
ENSG00000079739 PGM1 54330 sc-eQTL 1.60e-01 -0.115 0.0818 0.53 Mono L1
ENSG00000088035 ALG6 280166 sc-eQTL 6.66e-01 0.037 0.0857 0.53 Mono L1
ENSG00000116641 DOCK7 959355 sc-eQTL 1.96e-01 0.107 0.0826 0.53 Mono L1
ENSG00000125703 ATG4C 863609 sc-eQTL 3.35e-02 0.119 0.0554 0.53 Mono L1
ENSG00000142856 ITGB3BP 54020 sc-eQTL 8.24e-01 0.0197 0.0885 0.53 Mono L1
ENSG00000079739 PGM1 54330 sc-eQTL 2.35e-01 -0.0832 0.0698 0.532 NK L1
ENSG00000088035 ALG6 280166 sc-eQTL 3.82e-01 -0.0719 0.082 0.532 NK L1
ENSG00000116641 DOCK7 959355 sc-eQTL 4.58e-01 0.0503 0.0676 0.532 NK L1
ENSG00000125703 ATG4C 863609 sc-eQTL 5.68e-01 -0.0415 0.0726 0.532 NK L1
ENSG00000142856 ITGB3BP 54020 sc-eQTL 8.87e-01 0.0128 0.0903 0.532 NK L1
ENSG00000203965 EFCAB7 124369 sc-eQTL 7.72e-01 -0.0284 0.098 0.532 NK L1
ENSG00000079739 PGM1 54330 sc-eQTL 4.82e-01 0.0564 0.0802 0.53 Other_T L1
ENSG00000088035 ALG6 280166 sc-eQTL 2.73e-01 -0.0884 0.0804 0.53 Other_T L1
ENSG00000116641 DOCK7 959355 sc-eQTL 9.73e-01 0.00283 0.0823 0.53 Other_T L1
ENSG00000125703 ATG4C 863609 sc-eQTL 3.96e-01 0.0605 0.0712 0.53 Other_T L1
ENSG00000142856 ITGB3BP 54020 sc-eQTL 4.32e-02 -0.127 0.0626 0.53 Other_T L1
ENSG00000203965 EFCAB7 124369 sc-eQTL 7.91e-01 -0.0259 0.0975 0.53 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 54330 sc-eQTL 5.98e-01 -0.0565 0.107 0.533 B_Activated L2
ENSG00000088035 ALG6 280166 sc-eQTL 7.59e-02 -0.181 0.102 0.533 B_Activated L2
ENSG00000116641 DOCK7 959355 sc-eQTL 9.83e-01 -0.00202 0.0954 0.533 B_Activated L2
ENSG00000125703 ATG4C 863609 sc-eQTL 1.26e-01 0.153 0.0997 0.533 B_Activated L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 3.78e-01 -0.0865 0.0979 0.533 B_Activated L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 4.51e-01 0.0701 0.0927 0.533 B_Activated L2
ENSG00000079739 PGM1 54330 sc-eQTL 2.75e-01 -0.106 0.0972 0.53 B_Intermediate L2
ENSG00000088035 ALG6 280166 sc-eQTL 7.53e-01 -0.0311 0.099 0.53 B_Intermediate L2
ENSG00000116641 DOCK7 959355 sc-eQTL 1.65e-02 0.226 0.0933 0.53 B_Intermediate L2
ENSG00000125703 ATG4C 863609 sc-eQTL 5.48e-01 0.0482 0.08 0.53 B_Intermediate L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 4.25e-01 -0.0762 0.0953 0.53 B_Intermediate L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 8.18e-01 0.0218 0.0945 0.53 B_Intermediate L2
ENSG00000079739 PGM1 54330 sc-eQTL 5.80e-01 0.0532 0.0959 0.532 B_Memory L2
ENSG00000088035 ALG6 280166 sc-eQTL 1.45e-02 -0.237 0.0962 0.532 B_Memory L2
ENSG00000116641 DOCK7 959355 sc-eQTL 2.90e-01 0.0967 0.0913 0.532 B_Memory L2
ENSG00000125703 ATG4C 863609 sc-eQTL 5.23e-01 0.0556 0.0869 0.532 B_Memory L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 3.34e-01 -0.0961 0.0993 0.532 B_Memory L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 9.87e-01 0.00155 0.0988 0.532 B_Memory L2
ENSG00000079739 PGM1 54330 sc-eQTL 8.80e-01 0.0144 0.0951 0.53 B_Naive1 L2
ENSG00000088035 ALG6 280166 sc-eQTL 5.24e-01 -0.0609 0.0954 0.53 B_Naive1 L2
ENSG00000116641 DOCK7 959355 sc-eQTL 4.62e-01 0.0674 0.0914 0.53 B_Naive1 L2
ENSG00000125703 ATG4C 863609 sc-eQTL 2.82e-01 -0.0758 0.0703 0.53 B_Naive1 L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 9.57e-01 -0.00505 0.0935 0.53 B_Naive1 L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 4.40e-03 0.282 0.0979 0.53 B_Naive1 L2
ENSG00000079739 PGM1 54330 sc-eQTL 6.65e-01 -0.0406 0.0936 0.53 B_Naive2 L2
ENSG00000088035 ALG6 280166 sc-eQTL 9.19e-01 0.00994 0.0977 0.53 B_Naive2 L2
ENSG00000116641 DOCK7 959355 sc-eQTL 2.00e-01 0.12 0.0935 0.53 B_Naive2 L2
ENSG00000125703 ATG4C 863609 sc-eQTL 7.34e-01 -0.0308 0.0904 0.53 B_Naive2 L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 6.45e-01 0.0452 0.098 0.53 B_Naive2 L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 1.86e-01 0.129 0.0971 0.53 B_Naive2 L2
ENSG00000079739 PGM1 54330 sc-eQTL 4.76e-01 0.0684 0.0957 0.532 CD4_CTL L2
ENSG00000088035 ALG6 280166 sc-eQTL 8.95e-01 -0.0133 0.101 0.532 CD4_CTL L2
ENSG00000116641 DOCK7 959355 sc-eQTL 7.75e-01 0.0254 0.0886 0.532 CD4_CTL L2
ENSG00000125703 ATG4C 863609 sc-eQTL 8.96e-01 0.012 0.0916 0.532 CD4_CTL L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 3.61e-01 0.0896 0.0978 0.532 CD4_CTL L2
ENSG00000158966 CACHD1 -822388 sc-eQTL 1.07e-01 0.0572 0.0354 0.532 CD4_CTL L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 8.45e-01 -0.0182 0.0931 0.532 CD4_CTL L2
ENSG00000079739 PGM1 54330 sc-eQTL 3.94e-01 -0.0659 0.0772 0.53 CD4_Naive L2
ENSG00000088035 ALG6 280166 sc-eQTL 8.92e-01 -0.0115 0.084 0.53 CD4_Naive L2
ENSG00000116641 DOCK7 959355 sc-eQTL 9.34e-01 -0.0068 0.0825 0.53 CD4_Naive L2
ENSG00000125703 ATG4C 863609 sc-eQTL 3.58e-01 0.0671 0.0728 0.53 CD4_Naive L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 3.61e-01 0.0815 0.089 0.53 CD4_Naive L2
ENSG00000158966 CACHD1 -822388 sc-eQTL 5.82e-01 0.0291 0.0528 0.53 CD4_Naive L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 1.03e-01 0.144 0.088 0.53 CD4_Naive L2
ENSG00000079739 PGM1 54330 sc-eQTL 3.95e-01 0.0675 0.0793 0.53 CD4_TCM L2
ENSG00000088035 ALG6 280166 sc-eQTL 1.41e-01 0.136 0.0917 0.53 CD4_TCM L2
ENSG00000116641 DOCK7 959355 sc-eQTL 7.25e-01 0.0288 0.0817 0.53 CD4_TCM L2
ENSG00000125703 ATG4C 863609 sc-eQTL 9.09e-01 0.00911 0.0795 0.53 CD4_TCM L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 8.14e-01 0.0221 0.0938 0.53 CD4_TCM L2
ENSG00000158966 CACHD1 -822388 sc-eQTL 7.20e-01 0.0267 0.0743 0.53 CD4_TCM L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 7.89e-01 -0.0243 0.0907 0.53 CD4_TCM L2
ENSG00000079739 PGM1 54330 sc-eQTL 1.09e-01 0.15 0.0931 0.53 CD4_TEM L2
ENSG00000088035 ALG6 280166 sc-eQTL 7.42e-01 -0.0311 0.0942 0.53 CD4_TEM L2
ENSG00000116641 DOCK7 959355 sc-eQTL 2.66e-01 -0.102 0.0915 0.53 CD4_TEM L2
ENSG00000125703 ATG4C 863609 sc-eQTL 4.45e-01 -0.0681 0.089 0.53 CD4_TEM L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 2.60e-01 -0.104 0.0918 0.53 CD4_TEM L2
ENSG00000158966 CACHD1 -822388 sc-eQTL 5.49e-01 -0.0341 0.0569 0.53 CD4_TEM L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 7.44e-01 -0.0312 0.0953 0.53 CD4_TEM L2
ENSG00000079739 PGM1 54330 sc-eQTL 2.01e-01 -0.11 0.0862 0.53 CD8_CTL L2
ENSG00000088035 ALG6 280166 sc-eQTL 9.88e-01 -0.00142 0.092 0.53 CD8_CTL L2
ENSG00000116641 DOCK7 959355 sc-eQTL 6.77e-01 0.0364 0.0873 0.53 CD8_CTL L2
ENSG00000125703 ATG4C 863609 sc-eQTL 6.75e-01 -0.0391 0.0929 0.53 CD8_CTL L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 5.09e-01 -0.0638 0.0965 0.53 CD8_CTL L2
ENSG00000158966 CACHD1 -822388 sc-eQTL 2.07e-01 0.0516 0.0408 0.53 CD8_CTL L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 2.37e-01 0.117 0.0987 0.53 CD8_CTL L2
ENSG00000079739 PGM1 54330 sc-eQTL 1.00e-01 0.145 0.0878 0.53 CD8_Naive L2
ENSG00000088035 ALG6 280166 sc-eQTL 8.95e-02 0.155 0.0909 0.53 CD8_Naive L2
ENSG00000116641 DOCK7 959355 sc-eQTL 1.46e-01 0.137 0.0941 0.53 CD8_Naive L2
ENSG00000125703 ATG4C 863609 sc-eQTL 8.97e-01 0.0117 0.0908 0.53 CD8_Naive L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 8.52e-01 -0.0172 0.092 0.53 CD8_Naive L2
ENSG00000158966 CACHD1 -822388 sc-eQTL 1.71e-01 0.0872 0.0635 0.53 CD8_Naive L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 3.45e-01 0.0819 0.0865 0.53 CD8_Naive L2
ENSG00000079739 PGM1 54330 sc-eQTL 7.60e-01 0.0293 0.0959 0.535 CD8_TCM L2
ENSG00000088035 ALG6 280166 sc-eQTL 7.76e-01 0.0277 0.0971 0.535 CD8_TCM L2
ENSG00000116641 DOCK7 959355 sc-eQTL 6.33e-01 0.0453 0.0947 0.535 CD8_TCM L2
ENSG00000125703 ATG4C 863609 sc-eQTL 5.43e-01 -0.0591 0.0969 0.535 CD8_TCM L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 2.67e-01 -0.105 0.0939 0.535 CD8_TCM L2
ENSG00000158966 CACHD1 -822388 sc-eQTL 6.54e-01 0.0222 0.0495 0.535 CD8_TCM L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 2.72e-01 -0.105 0.0957 0.535 CD8_TCM L2
ENSG00000079739 PGM1 54330 sc-eQTL 3.56e-01 0.092 0.0995 0.527 CD8_TEM L2
ENSG00000088035 ALG6 280166 sc-eQTL 3.13e-02 0.215 0.0989 0.527 CD8_TEM L2
ENSG00000116641 DOCK7 959355 sc-eQTL 9.89e-01 -0.00136 0.097 0.527 CD8_TEM L2
ENSG00000125703 ATG4C 863609 sc-eQTL 6.94e-01 0.0368 0.0932 0.527 CD8_TEM L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 6.68e-01 0.0434 0.101 0.527 CD8_TEM L2
ENSG00000158966 CACHD1 -822388 sc-eQTL 1.99e-01 0.0264 0.0205 0.527 CD8_TEM L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 7.34e-01 0.0333 0.0979 0.527 CD8_TEM L2
ENSG00000079739 PGM1 54330 sc-eQTL 8.88e-01 -0.013 0.0922 0.532 MAIT L2
ENSG00000088035 ALG6 280166 sc-eQTL 7.65e-01 0.0274 0.0913 0.532 MAIT L2
ENSG00000116641 DOCK7 959355 sc-eQTL 4.79e-01 0.0619 0.0874 0.532 MAIT L2
ENSG00000125703 ATG4C 863609 sc-eQTL 5.33e-01 -0.0576 0.0922 0.532 MAIT L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 1.31e-01 -0.139 0.0919 0.532 MAIT L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 7.68e-01 0.0281 0.0951 0.532 MAIT L2
ENSG00000079739 PGM1 54330 sc-eQTL 1.24e-01 -0.144 0.0935 0.536 NK_CD56bright L2
ENSG00000088035 ALG6 280166 sc-eQTL 9.84e-01 0.00193 0.0964 0.536 NK_CD56bright L2
ENSG00000116641 DOCK7 959355 sc-eQTL 1.87e-02 0.195 0.0824 0.536 NK_CD56bright L2
ENSG00000125703 ATG4C 863609 sc-eQTL 1.63e-01 0.13 0.0929 0.536 NK_CD56bright L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 7.84e-01 -0.0266 0.0972 0.536 NK_CD56bright L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 7.14e-01 -0.0351 0.0958 0.536 NK_CD56bright L2
ENSG00000079739 PGM1 54330 sc-eQTL 2.20e-01 -0.0898 0.073 0.532 NK_CD56dim L2
ENSG00000088035 ALG6 280166 sc-eQTL 7.19e-01 -0.0335 0.0929 0.532 NK_CD56dim L2
ENSG00000116641 DOCK7 959355 sc-eQTL 9.73e-01 -0.00272 0.0809 0.532 NK_CD56dim L2
ENSG00000125703 ATG4C 863609 sc-eQTL 5.46e-01 -0.0497 0.0821 0.532 NK_CD56dim L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 7.85e-01 -0.0255 0.0935 0.532 NK_CD56dim L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 6.81e-01 -0.0415 0.101 0.532 NK_CD56dim L2
ENSG00000079739 PGM1 54330 sc-eQTL 3.40e-01 0.0955 0.0997 0.541 NK_HLA L2
ENSG00000088035 ALG6 280166 sc-eQTL 1.36e-01 -0.154 0.103 0.541 NK_HLA L2
ENSG00000116641 DOCK7 959355 sc-eQTL 3.03e-01 -0.0816 0.0791 0.541 NK_HLA L2
ENSG00000125703 ATG4C 863609 sc-eQTL 1.84e-01 0.123 0.0918 0.541 NK_HLA L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 6.96e-02 -0.175 0.096 0.541 NK_HLA L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 2.83e-01 -0.0989 0.0919 0.541 NK_HLA L2
ENSG00000079739 PGM1 54330 sc-eQTL 5.97e-01 -0.0425 0.0804 0.532 NK_cytokine L2
ENSG00000088035 ALG6 280166 sc-eQTL 5.68e-01 -0.0519 0.0908 0.532 NK_cytokine L2
ENSG00000116641 DOCK7 959355 sc-eQTL 9.18e-01 0.00868 0.0842 0.532 NK_cytokine L2
ENSG00000125703 ATG4C 863609 sc-eQTL 3.42e-01 -0.0819 0.086 0.532 NK_cytokine L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 5.43e-01 0.0543 0.0891 0.532 NK_cytokine L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 8.77e-01 -0.0148 0.0951 0.532 NK_cytokine L2
ENSG00000079739 PGM1 54330 sc-eQTL 8.34e-01 0.0224 0.106 0.493 PB L2
ENSG00000088035 ALG6 280166 sc-eQTL 2.95e-02 0.241 0.109 0.493 PB L2
ENSG00000116641 DOCK7 959355 sc-eQTL 4.14e-01 -0.0978 0.119 0.493 PB L2
ENSG00000125703 ATG4C 863609 sc-eQTL 1.06e-01 0.168 0.103 0.493 PB L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 7.70e-01 -0.0305 0.104 0.493 PB L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 2.35e-01 -0.135 0.114 0.493 PB L2
ENSG00000079739 PGM1 54330 sc-eQTL 1.96e-01 0.115 0.0884 0.53 Pro_T L2
ENSG00000088035 ALG6 280166 sc-eQTL 6.74e-01 -0.0381 0.0902 0.53 Pro_T L2
ENSG00000116641 DOCK7 959355 sc-eQTL 1.65e-01 0.126 0.0901 0.53 Pro_T L2
ENSG00000125703 ATG4C 863609 sc-eQTL 3.18e-01 0.0792 0.0791 0.53 Pro_T L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 7.80e-01 -0.0222 0.0795 0.53 Pro_T L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 1.54e-01 -0.132 0.0919 0.53 Pro_T L2
ENSG00000079739 PGM1 54330 sc-eQTL 5.40e-01 0.0553 0.0901 0.53 Treg L2
ENSG00000088035 ALG6 280166 sc-eQTL 3.69e-01 0.0865 0.0962 0.53 Treg L2
ENSG00000116641 DOCK7 959355 sc-eQTL 4.52e-01 -0.0665 0.0884 0.53 Treg L2
ENSG00000125703 ATG4C 863609 sc-eQTL 2.05e-01 0.115 0.0901 0.53 Treg L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 6.68e-01 0.0406 0.0946 0.53 Treg L2
ENSG00000158966 CACHD1 -822388 sc-eQTL 1.14e-01 0.113 0.0711 0.53 Treg L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 9.96e-01 -0.000484 0.0905 0.53 Treg L2
ENSG00000079739 PGM1 54330 sc-eQTL 4.33e-02 -0.187 0.0916 0.546 cDC L2
ENSG00000088035 ALG6 280166 sc-eQTL 5.41e-01 -0.0576 0.0939 0.546 cDC L2
ENSG00000116641 DOCK7 959355 sc-eQTL 5.44e-01 -0.0561 0.0921 0.546 cDC L2
ENSG00000125703 ATG4C 863609 sc-eQTL 9.86e-01 -0.00144 0.0801 0.546 cDC L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 4.74e-01 -0.0728 0.101 0.546 cDC L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 1.83e-01 -0.108 0.0812 0.546 cDC L2
ENSG00000079739 PGM1 54330 sc-eQTL 1.99e-01 -0.11 0.0856 0.53 cMono_IL1B L2
ENSG00000088035 ALG6 280166 sc-eQTL 8.55e-01 0.0158 0.086 0.53 cMono_IL1B L2
ENSG00000116641 DOCK7 959355 sc-eQTL 2.38e-01 0.107 0.0904 0.53 cMono_IL1B L2
ENSG00000125703 ATG4C 863609 sc-eQTL 1.19e-03 0.205 0.0622 0.53 cMono_IL1B L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 1.94e-01 -0.117 0.09 0.53 cMono_IL1B L2
ENSG00000079739 PGM1 54330 sc-eQTL 3.25e-01 -0.0936 0.0949 0.53 cMono_S100A L2
ENSG00000088035 ALG6 280166 sc-eQTL 1.14e-01 0.152 0.0958 0.53 cMono_S100A L2
ENSG00000116641 DOCK7 959355 sc-eQTL 3.90e-01 0.0769 0.0892 0.53 cMono_S100A L2
ENSG00000125703 ATG4C 863609 sc-eQTL 7.68e-01 -0.0228 0.0774 0.53 cMono_S100A L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 1.37e-02 0.214 0.0861 0.53 cMono_S100A L2
ENSG00000079739 PGM1 54330 sc-eQTL 1.91e-01 0.146 0.111 0.545 gdT L2
ENSG00000088035 ALG6 280166 sc-eQTL 7.17e-01 -0.0432 0.119 0.545 gdT L2
ENSG00000116641 DOCK7 959355 sc-eQTL 8.67e-01 -0.0195 0.117 0.545 gdT L2
ENSG00000125703 ATG4C 863609 sc-eQTL 8.85e-01 0.0161 0.111 0.545 gdT L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 7.80e-02 -0.208 0.117 0.545 gdT L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 1.27e-01 -0.177 0.115 0.545 gdT L2
ENSG00000079739 PGM1 54330 sc-eQTL 5.30e-02 -0.187 0.0961 0.536 intMono L2
ENSG00000088035 ALG6 280166 sc-eQTL 2.88e-01 -0.096 0.09 0.536 intMono L2
ENSG00000116641 DOCK7 959355 sc-eQTL 7.35e-01 -0.0312 0.0922 0.536 intMono L2
ENSG00000125703 ATG4C 863609 sc-eQTL 1.93e-01 -0.114 0.0877 0.536 intMono L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 8.00e-01 -0.0246 0.097 0.536 intMono L2
ENSG00000079739 PGM1 54330 sc-eQTL 2.74e-01 -0.0972 0.0887 0.525 ncMono L2
ENSG00000088035 ALG6 280166 sc-eQTL 8.22e-01 -0.022 0.0977 0.525 ncMono L2
ENSG00000116641 DOCK7 959355 sc-eQTL 8.01e-01 -0.0243 0.0962 0.525 ncMono L2
ENSG00000125703 ATG4C 863609 sc-eQTL 8.17e-01 0.0208 0.0898 0.525 ncMono L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 3.44e-01 0.089 0.0938 0.525 ncMono L2
ENSG00000079739 PGM1 54330 sc-eQTL 9.61e-01 -0.00508 0.105 0.548 pDC L2
ENSG00000088035 ALG6 280166 sc-eQTL 5.72e-01 0.0578 0.102 0.548 pDC L2
ENSG00000116641 DOCK7 959355 sc-eQTL 9.16e-01 0.011 0.104 0.548 pDC L2
ENSG00000125703 ATG4C 863609 sc-eQTL 7.74e-01 0.0268 0.0935 0.548 pDC L2
ENSG00000142856 ITGB3BP 54020 sc-eQTL 8.45e-01 0.0205 0.105 0.548 pDC L2
ENSG00000203965 EFCAB7 124369 sc-eQTL 6.56e-01 0.0414 0.0928 0.548 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 54330 sc-eQTL 2.15e-01 -0.112 0.0904 0.53 B_Memory LOneK1K
ENSG00000088035 ALG6 280166 sc-eQTL 7.70e-02 -0.177 0.0996 0.53 B_Memory LOneK1K
ENSG00000116641 DOCK7 959355 sc-eQTL 3.46e-02 0.183 0.0861 0.53 B_Memory LOneK1K
ENSG00000125703 ATG4C 863609 sc-eQTL 3.91e-01 0.0604 0.0702 0.53 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 54020 sc-eQTL 4.17e-01 -0.075 0.0923 0.53 B_Memory LOneK1K
ENSG00000203965 EFCAB7 124369 sc-eQTL 9.08e-01 0.0112 0.0964 0.53 B_Memory LOneK1K
ENSG00000079739 PGM1 54330 sc-eQTL 6.39e-01 -0.0434 0.0924 0.53 B_Naive LOneK1K
ENSG00000088035 ALG6 280166 sc-eQTL 5.10e-01 -0.0628 0.0951 0.53 B_Naive LOneK1K
ENSG00000116641 DOCK7 959355 sc-eQTL 2.49e-01 0.102 0.0886 0.53 B_Naive LOneK1K
ENSG00000125703 ATG4C 863609 sc-eQTL 1.94e-01 -0.0881 0.0675 0.53 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 54020 sc-eQTL 9.71e-01 0.00352 0.0959 0.53 B_Naive LOneK1K
ENSG00000203965 EFCAB7 124369 sc-eQTL 4.31e-03 0.273 0.0945 0.53 B_Naive LOneK1K
ENSG00000079739 PGM1 54330 sc-eQTL 2.75e-01 -0.0958 0.0875 0.53 CD14_Mono LOneK1K
ENSG00000088035 ALG6 280166 sc-eQTL 2.79e-01 0.0919 0.0848 0.53 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 959355 sc-eQTL 2.18e-01 0.105 0.0853 0.53 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 863609 sc-eQTL 5.78e-02 0.112 0.0587 0.53 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 54020 sc-eQTL 9.72e-01 -0.00309 0.0875 0.53 CD14_Mono LOneK1K
ENSG00000079739 PGM1 54330 sc-eQTL 3.42e-02 -0.179 0.084 0.534 CD16_Mono LOneK1K
ENSG00000088035 ALG6 280166 sc-eQTL 1.61e-01 -0.135 0.096 0.534 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 959355 sc-eQTL 6.62e-01 0.0418 0.0954 0.534 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 863609 sc-eQTL 9.54e-01 0.00466 0.0813 0.534 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 54020 sc-eQTL 4.87e-01 0.0656 0.0943 0.534 CD16_Mono LOneK1K
ENSG00000079739 PGM1 54330 sc-eQTL 4.86e-01 -0.0498 0.0713 0.532 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 280166 sc-eQTL 3.18e-01 -0.0857 0.0855 0.532 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 959355 sc-eQTL 7.61e-01 -0.0234 0.0768 0.532 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 863609 sc-eQTL 4.98e-01 -0.052 0.0766 0.532 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 54020 sc-eQTL 9.49e-01 0.00579 0.0909 0.532 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 124369 sc-eQTL 9.17e-01 -0.0105 0.1 0.532 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 54330 eQTL 0.0258 0.0392 0.0176 0.0 0.0 0.421

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000088035 \N 280166 1.25e-06 9.44e-07 2.52e-07 4.88e-07 1.14e-07 3.2e-07 8.39e-07 2.65e-07 8.7e-07 2.72e-07 1.15e-06 5.45e-07 1.47e-06 2.19e-07 4.15e-07 5.29e-07 7.79e-07 5.27e-07 3.77e-07 3.96e-07 2.86e-07 7.21e-07 6.04e-07 4.79e-07 1.72e-06 2.48e-07 5.49e-07 4.77e-07 8.24e-07 9.93e-07 4.61e-07 3.51e-08 1.18e-07 3.55e-07 3.27e-07 2.99e-07 3.77e-07 1.16e-07 1.55e-07 9.67e-09 1.47e-07 1.3e-06 6.44e-08 4.18e-08 1.96e-07 4.23e-08 1.62e-07 3.84e-08 5.47e-08