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Genes within 1Mb (chr1:63635210:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 41799 sc-eQTL 3.76e-01 -0.0651 0.0733 0.393 B L1
ENSG00000088035 ALG6 267635 sc-eQTL 3.99e-01 -0.0642 0.076 0.393 B L1
ENSG00000116641 DOCK7 946824 sc-eQTL 1.81e-01 -0.102 0.0758 0.393 B L1
ENSG00000125703 ATG4C 851078 sc-eQTL 4.55e-01 0.0395 0.0528 0.393 B L1
ENSG00000142856 ITGB3BP 41489 sc-eQTL 2.19e-01 -0.103 0.0839 0.393 B L1
ENSG00000203965 EFCAB7 111838 sc-eQTL 6.82e-01 0.0354 0.0862 0.393 B L1
ENSG00000079739 PGM1 41799 sc-eQTL 5.50e-01 -0.0377 0.063 0.393 CD4T L1
ENSG00000088035 ALG6 267635 sc-eQTL 3.67e-01 -0.0628 0.0695 0.393 CD4T L1
ENSG00000116641 DOCK7 946824 sc-eQTL 6.98e-01 0.0273 0.0704 0.393 CD4T L1
ENSG00000125703 ATG4C 851078 sc-eQTL 1.45e-01 0.0828 0.0566 0.393 CD4T L1
ENSG00000142856 ITGB3BP 41489 sc-eQTL 9.71e-01 0.00292 0.0808 0.393 CD4T L1
ENSG00000158966 CACHD1 -834919 sc-eQTL 1.08e-01 0.0773 0.0479 0.393 CD4T L1
ENSG00000203965 EFCAB7 111838 sc-eQTL 6.68e-01 -0.0312 0.0725 0.393 CD4T L1
ENSG00000079739 PGM1 41799 sc-eQTL 6.48e-01 0.032 0.0701 0.393 CD8T L1
ENSG00000088035 ALG6 267635 sc-eQTL 2.13e-01 -0.0963 0.0771 0.393 CD8T L1
ENSG00000116641 DOCK7 946824 sc-eQTL 5.39e-01 0.0481 0.0783 0.393 CD8T L1
ENSG00000125703 ATG4C 851078 sc-eQTL 4.77e-01 0.053 0.0743 0.393 CD8T L1
ENSG00000142856 ITGB3BP 41489 sc-eQTL 6.74e-01 0.0351 0.0832 0.393 CD8T L1
ENSG00000158966 CACHD1 -834919 sc-eQTL 3.19e-02 0.09 0.0417 0.393 CD8T L1
ENSG00000203965 EFCAB7 111838 sc-eQTL 6.90e-02 0.15 0.0823 0.393 CD8T L1
ENSG00000079739 PGM1 41799 sc-eQTL 5.22e-01 -0.05 0.078 0.39 DC L1
ENSG00000088035 ALG6 267635 sc-eQTL 9.34e-01 0.00664 0.0806 0.39 DC L1
ENSG00000116641 DOCK7 946824 sc-eQTL 2.86e-01 0.0881 0.0824 0.39 DC L1
ENSG00000125703 ATG4C 851078 sc-eQTL 9.56e-02 0.108 0.0642 0.39 DC L1
ENSG00000142856 ITGB3BP 41489 sc-eQTL 2.19e-01 -0.111 0.09 0.39 DC L1
ENSG00000203965 EFCAB7 111838 sc-eQTL 2.95e-01 -0.0823 0.0784 0.39 DC L1
ENSG00000079739 PGM1 41799 sc-eQTL 2.85e-01 -0.0824 0.0768 0.393 Mono L1
ENSG00000088035 ALG6 267635 sc-eQTL 7.11e-01 0.0298 0.0803 0.393 Mono L1
ENSG00000116641 DOCK7 946824 sc-eQTL 2.80e-01 0.0839 0.0775 0.393 Mono L1
ENSG00000125703 ATG4C 851078 sc-eQTL 9.38e-01 0.00406 0.0525 0.393 Mono L1
ENSG00000142856 ITGB3BP 41489 sc-eQTL 8.42e-01 -0.0166 0.083 0.393 Mono L1
ENSG00000079739 PGM1 41799 sc-eQTL 4.67e-02 0.128 0.0642 0.391 NK L1
ENSG00000088035 ALG6 267635 sc-eQTL 1.39e-01 0.112 0.0756 0.391 NK L1
ENSG00000116641 DOCK7 946824 sc-eQTL 3.51e-01 0.0583 0.0624 0.391 NK L1
ENSG00000125703 ATG4C 851078 sc-eQTL 4.87e-01 0.0467 0.0671 0.391 NK L1
ENSG00000142856 ITGB3BP 41489 sc-eQTL 3.62e-01 -0.0761 0.0833 0.391 NK L1
ENSG00000203965 EFCAB7 111838 sc-eQTL 1.93e-01 -0.118 0.0903 0.391 NK L1
ENSG00000079739 PGM1 41799 sc-eQTL 2.48e-01 0.0864 0.0746 0.393 Other_T L1
ENSG00000088035 ALG6 267635 sc-eQTL 2.40e-01 -0.0883 0.0749 0.393 Other_T L1
ENSG00000116641 DOCK7 946824 sc-eQTL 9.24e-01 0.00733 0.0767 0.393 Other_T L1
ENSG00000125703 ATG4C 851078 sc-eQTL 7.10e-02 0.12 0.0659 0.393 Other_T L1
ENSG00000142856 ITGB3BP 41489 sc-eQTL 8.12e-02 -0.102 0.0585 0.393 Other_T L1
ENSG00000203965 EFCAB7 111838 sc-eQTL 6.65e-01 -0.0394 0.0908 0.393 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 41799 sc-eQTL 9.52e-01 0.00604 0.1 0.388 B_Activated L2
ENSG00000088035 ALG6 267635 sc-eQTL 7.48e-02 0.17 0.0951 0.388 B_Activated L2
ENSG00000116641 DOCK7 946824 sc-eQTL 9.74e-01 0.00293 0.0893 0.388 B_Activated L2
ENSG00000125703 ATG4C 851078 sc-eQTL 9.84e-01 0.00189 0.0939 0.388 B_Activated L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 1.78e-01 0.124 0.0913 0.388 B_Activated L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 1.04e-01 -0.141 0.0862 0.388 B_Activated L2
ENSG00000079739 PGM1 41799 sc-eQTL 2.83e-01 -0.0937 0.0871 0.393 B_Intermediate L2
ENSG00000088035 ALG6 267635 sc-eQTL 6.33e-01 -0.0424 0.0887 0.393 B_Intermediate L2
ENSG00000116641 DOCK7 946824 sc-eQTL 4.69e-01 -0.0614 0.0846 0.393 B_Intermediate L2
ENSG00000125703 ATG4C 851078 sc-eQTL 2.14e-01 0.0891 0.0715 0.393 B_Intermediate L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 3.00e-01 -0.0885 0.0852 0.393 B_Intermediate L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 7.47e-01 0.0273 0.0846 0.393 B_Intermediate L2
ENSG00000079739 PGM1 41799 sc-eQTL 5.18e-01 0.0561 0.0867 0.392 B_Memory L2
ENSG00000088035 ALG6 267635 sc-eQTL 7.64e-01 0.0265 0.0882 0.392 B_Memory L2
ENSG00000116641 DOCK7 946824 sc-eQTL 1.17e-01 -0.129 0.0822 0.392 B_Memory L2
ENSG00000125703 ATG4C 851078 sc-eQTL 2.02e-01 -0.1 0.0783 0.392 B_Memory L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 3.91e-01 -0.0772 0.0898 0.392 B_Memory L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 6.93e-01 -0.0353 0.0893 0.392 B_Memory L2
ENSG00000079739 PGM1 41799 sc-eQTL 2.40e-02 -0.198 0.0872 0.393 B_Naive1 L2
ENSG00000088035 ALG6 267635 sc-eQTL 4.88e-03 -0.247 0.0869 0.393 B_Naive1 L2
ENSG00000116641 DOCK7 946824 sc-eQTL 5.45e-01 -0.0514 0.0848 0.393 B_Naive1 L2
ENSG00000125703 ATG4C 851078 sc-eQTL 5.56e-01 -0.0385 0.0653 0.393 B_Naive1 L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 8.02e-01 -0.0217 0.0867 0.393 B_Naive1 L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 7.82e-01 0.0256 0.0925 0.393 B_Naive1 L2
ENSG00000079739 PGM1 41799 sc-eQTL 5.20e-01 -0.0555 0.0861 0.393 B_Naive2 L2
ENSG00000088035 ALG6 267635 sc-eQTL 1.81e-01 0.12 0.0895 0.393 B_Naive2 L2
ENSG00000116641 DOCK7 946824 sc-eQTL 7.52e-01 0.0274 0.0864 0.393 B_Naive2 L2
ENSG00000125703 ATG4C 851078 sc-eQTL 4.40e-01 0.0643 0.083 0.393 B_Naive2 L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 1.28e-01 -0.137 0.0897 0.393 B_Naive2 L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 6.43e-01 0.0416 0.0897 0.393 B_Naive2 L2
ENSG00000079739 PGM1 41799 sc-eQTL 1.06e-02 -0.224 0.0869 0.391 CD4_CTL L2
ENSG00000088035 ALG6 267635 sc-eQTL 9.33e-01 0.0079 0.0934 0.391 CD4_CTL L2
ENSG00000116641 DOCK7 946824 sc-eQTL 1.52e-01 0.117 0.0812 0.391 CD4_CTL L2
ENSG00000125703 ATG4C 851078 sc-eQTL 9.63e-01 -0.00388 0.0845 0.391 CD4_CTL L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 1.07e-01 0.145 0.0898 0.391 CD4_CTL L2
ENSG00000158966 CACHD1 -834919 sc-eQTL 4.87e-01 0.0228 0.0328 0.391 CD4_CTL L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 2.69e-01 -0.0949 0.0856 0.391 CD4_CTL L2
ENSG00000079739 PGM1 41799 sc-eQTL 6.90e-01 -0.0282 0.0707 0.393 CD4_Naive L2
ENSG00000088035 ALG6 267635 sc-eQTL 2.10e-01 -0.0963 0.0765 0.393 CD4_Naive L2
ENSG00000116641 DOCK7 946824 sc-eQTL 9.91e-01 0.00088 0.0755 0.393 CD4_Naive L2
ENSG00000125703 ATG4C 851078 sc-eQTL 2.04e-01 0.0846 0.0665 0.393 CD4_Naive L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 7.84e-01 -0.0224 0.0815 0.393 CD4_Naive L2
ENSG00000158966 CACHD1 -834919 sc-eQTL 2.09e-01 0.0606 0.0481 0.393 CD4_Naive L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 7.02e-01 -0.031 0.081 0.393 CD4_Naive L2
ENSG00000079739 PGM1 41799 sc-eQTL 4.96e-01 0.0502 0.0736 0.393 CD4_TCM L2
ENSG00000088035 ALG6 267635 sc-eQTL 6.98e-01 0.0333 0.0855 0.393 CD4_TCM L2
ENSG00000116641 DOCK7 946824 sc-eQTL 3.32e-01 0.0736 0.0757 0.393 CD4_TCM L2
ENSG00000125703 ATG4C 851078 sc-eQTL 8.37e-01 0.0152 0.0738 0.393 CD4_TCM L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 7.01e-01 0.0334 0.087 0.393 CD4_TCM L2
ENSG00000158966 CACHD1 -834919 sc-eQTL 7.31e-01 0.0238 0.0689 0.393 CD4_TCM L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 5.26e-01 0.0534 0.0841 0.393 CD4_TCM L2
ENSG00000079739 PGM1 41799 sc-eQTL 9.53e-01 -0.00517 0.0868 0.393 CD4_TEM L2
ENSG00000088035 ALG6 267635 sc-eQTL 2.13e-01 -0.109 0.087 0.393 CD4_TEM L2
ENSG00000116641 DOCK7 946824 sc-eQTL 3.68e-01 -0.0767 0.0849 0.393 CD4_TEM L2
ENSG00000125703 ATG4C 851078 sc-eQTL 7.87e-01 0.0223 0.0826 0.393 CD4_TEM L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 3.79e-01 0.0751 0.0851 0.393 CD4_TEM L2
ENSG00000158966 CACHD1 -834919 sc-eQTL 1.89e-01 0.0693 0.0525 0.393 CD4_TEM L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 4.89e-01 -0.0612 0.0883 0.393 CD4_TEM L2
ENSG00000079739 PGM1 41799 sc-eQTL 9.58e-02 -0.132 0.079 0.393 CD8_CTL L2
ENSG00000088035 ALG6 267635 sc-eQTL 1.43e-01 -0.124 0.0841 0.393 CD8_CTL L2
ENSG00000116641 DOCK7 946824 sc-eQTL 4.54e-01 0.0601 0.0801 0.393 CD8_CTL L2
ENSG00000125703 ATG4C 851078 sc-eQTL 8.90e-01 -0.0118 0.0854 0.393 CD8_CTL L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 2.09e-01 0.112 0.0885 0.393 CD8_CTL L2
ENSG00000158966 CACHD1 -834919 sc-eQTL 8.25e-01 0.00833 0.0376 0.393 CD8_CTL L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 3.18e-01 0.0909 0.0907 0.393 CD8_CTL L2
ENSG00000079739 PGM1 41799 sc-eQTL 2.14e-02 0.183 0.079 0.393 CD8_Naive L2
ENSG00000088035 ALG6 267635 sc-eQTL 7.33e-01 0.0283 0.0828 0.393 CD8_Naive L2
ENSG00000116641 DOCK7 946824 sc-eQTL 1.43e-01 0.125 0.0852 0.393 CD8_Naive L2
ENSG00000125703 ATG4C 851078 sc-eQTL 1.77e-01 0.111 0.0818 0.393 CD8_Naive L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 4.87e-01 0.0579 0.0832 0.393 CD8_Naive L2
ENSG00000158966 CACHD1 -834919 sc-eQTL 1.93e-01 0.0751 0.0575 0.393 CD8_Naive L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 5.47e-01 0.0473 0.0784 0.393 CD8_Naive L2
ENSG00000079739 PGM1 41799 sc-eQTL 7.36e-01 -0.03 0.0888 0.398 CD8_TCM L2
ENSG00000088035 ALG6 267635 sc-eQTL 9.05e-01 -0.0107 0.0899 0.398 CD8_TCM L2
ENSG00000116641 DOCK7 946824 sc-eQTL 1.48e-01 -0.127 0.0873 0.398 CD8_TCM L2
ENSG00000125703 ATG4C 851078 sc-eQTL 4.16e-01 0.073 0.0896 0.398 CD8_TCM L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 1.45e-01 -0.127 0.0867 0.398 CD8_TCM L2
ENSG00000158966 CACHD1 -834919 sc-eQTL 2.30e-01 0.055 0.0456 0.398 CD8_TCM L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 5.36e-01 0.0551 0.0888 0.398 CD8_TCM L2
ENSG00000079739 PGM1 41799 sc-eQTL 5.88e-01 -0.0493 0.0909 0.393 CD8_TEM L2
ENSG00000088035 ALG6 267635 sc-eQTL 7.54e-01 0.0286 0.0913 0.393 CD8_TEM L2
ENSG00000116641 DOCK7 946824 sc-eQTL 8.74e-01 -0.014 0.0885 0.393 CD8_TEM L2
ENSG00000125703 ATG4C 851078 sc-eQTL 1.41e-01 0.125 0.0846 0.393 CD8_TEM L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 2.06e-01 0.116 0.0917 0.393 CD8_TEM L2
ENSG00000158966 CACHD1 -834919 sc-eQTL 9.84e-01 -0.000373 0.0188 0.393 CD8_TEM L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 2.11e-01 0.112 0.0889 0.393 CD8_TEM L2
ENSG00000079739 PGM1 41799 sc-eQTL 9.29e-02 0.142 0.0844 0.392 MAIT L2
ENSG00000088035 ALG6 267635 sc-eQTL 7.25e-01 0.0296 0.0841 0.392 MAIT L2
ENSG00000116641 DOCK7 946824 sc-eQTL 7.20e-01 0.0289 0.0806 0.392 MAIT L2
ENSG00000125703 ATG4C 851078 sc-eQTL 3.21e-01 0.0844 0.0848 0.392 MAIT L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 7.53e-01 -0.0268 0.0851 0.392 MAIT L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 7.21e-01 -0.0314 0.0876 0.392 MAIT L2
ENSG00000079739 PGM1 41799 sc-eQTL 6.21e-01 -0.0427 0.0864 0.391 NK_CD56bright L2
ENSG00000088035 ALG6 267635 sc-eQTL 1.71e-01 0.121 0.0882 0.391 NK_CD56bright L2
ENSG00000116641 DOCK7 946824 sc-eQTL 7.41e-01 -0.0254 0.0768 0.391 NK_CD56bright L2
ENSG00000125703 ATG4C 851078 sc-eQTL 6.67e-01 0.037 0.0858 0.391 NK_CD56bright L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 5.19e-01 -0.0576 0.0892 0.391 NK_CD56bright L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 8.01e-01 0.0222 0.0881 0.391 NK_CD56bright L2
ENSG00000079739 PGM1 41799 sc-eQTL 5.91e-01 0.0364 0.0676 0.39 NK_CD56dim L2
ENSG00000088035 ALG6 267635 sc-eQTL 6.87e-01 -0.0346 0.0858 0.39 NK_CD56dim L2
ENSG00000116641 DOCK7 946824 sc-eQTL 2.81e-01 0.0806 0.0745 0.39 NK_CD56dim L2
ENSG00000125703 ATG4C 851078 sc-eQTL 5.60e-01 -0.0442 0.0758 0.39 NK_CD56dim L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 2.37e-01 -0.102 0.086 0.39 NK_CD56dim L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 2.11e-01 -0.117 0.0929 0.39 NK_CD56dim L2
ENSG00000079739 PGM1 41799 sc-eQTL 4.03e-02 0.193 0.0934 0.393 NK_HLA L2
ENSG00000088035 ALG6 267635 sc-eQTL 4.92e-02 0.192 0.0969 0.393 NK_HLA L2
ENSG00000116641 DOCK7 946824 sc-eQTL 5.09e-01 0.0495 0.0748 0.393 NK_HLA L2
ENSG00000125703 ATG4C 851078 sc-eQTL 5.62e-01 0.0506 0.087 0.393 NK_HLA L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 4.66e-01 -0.0666 0.0913 0.393 NK_HLA L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 2.40e-01 -0.102 0.0867 0.393 NK_HLA L2
ENSG00000079739 PGM1 41799 sc-eQTL 3.72e-02 0.155 0.0737 0.39 NK_cytokine L2
ENSG00000088035 ALG6 267635 sc-eQTL 2.55e-01 0.0958 0.0839 0.39 NK_cytokine L2
ENSG00000116641 DOCK7 946824 sc-eQTL 3.82e-02 0.161 0.0772 0.39 NK_cytokine L2
ENSG00000125703 ATG4C 851078 sc-eQTL 5.60e-01 0.0465 0.0797 0.39 NK_cytokine L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 4.22e-01 -0.0664 0.0825 0.39 NK_cytokine L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 7.23e-01 -0.0312 0.088 0.39 NK_cytokine L2
ENSG00000079739 PGM1 41799 sc-eQTL 3.49e-01 0.105 0.112 0.381 PB L2
ENSG00000088035 ALG6 267635 sc-eQTL 1.25e-01 -0.181 0.117 0.381 PB L2
ENSG00000116641 DOCK7 946824 sc-eQTL 5.27e-01 -0.0801 0.126 0.381 PB L2
ENSG00000125703 ATG4C 851078 sc-eQTL 4.09e-01 0.0911 0.11 0.381 PB L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 3.22e-02 -0.234 0.108 0.381 PB L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 7.80e-01 0.0339 0.121 0.381 PB L2
ENSG00000079739 PGM1 41799 sc-eQTL 4.19e-01 0.0659 0.0815 0.387 Pro_T L2
ENSG00000088035 ALG6 267635 sc-eQTL 8.81e-02 -0.141 0.0824 0.387 Pro_T L2
ENSG00000116641 DOCK7 946824 sc-eQTL 6.24e-01 0.0409 0.0832 0.387 Pro_T L2
ENSG00000125703 ATG4C 851078 sc-eQTL 6.85e-01 0.0296 0.0729 0.387 Pro_T L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 3.67e-01 0.0659 0.073 0.387 Pro_T L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 5.98e-01 -0.0449 0.0849 0.387 Pro_T L2
ENSG00000079739 PGM1 41799 sc-eQTL 2.37e-01 0.0989 0.0834 0.393 Treg L2
ENSG00000088035 ALG6 267635 sc-eQTL 8.06e-01 0.022 0.0895 0.393 Treg L2
ENSG00000116641 DOCK7 946824 sc-eQTL 7.40e-01 -0.0273 0.0821 0.393 Treg L2
ENSG00000125703 ATG4C 851078 sc-eQTL 6.87e-01 0.0339 0.0839 0.393 Treg L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 9.89e-01 -0.00121 0.0878 0.393 Treg L2
ENSG00000158966 CACHD1 -834919 sc-eQTL 9.97e-01 -0.000264 0.0664 0.393 Treg L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 9.74e-01 0.00274 0.084 0.393 Treg L2
ENSG00000079739 PGM1 41799 sc-eQTL 1.11e-02 -0.212 0.0825 0.385 cDC L2
ENSG00000088035 ALG6 267635 sc-eQTL 1.90e-01 -0.111 0.0848 0.385 cDC L2
ENSG00000116641 DOCK7 946824 sc-eQTL 6.24e-01 0.041 0.0835 0.385 cDC L2
ENSG00000125703 ATG4C 851078 sc-eQTL 2.89e-01 0.0769 0.0724 0.385 cDC L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 6.46e-01 -0.0423 0.0919 0.385 cDC L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 9.32e-01 0.00633 0.0739 0.385 cDC L2
ENSG00000079739 PGM1 41799 sc-eQTL 2.12e-01 -0.1 0.08 0.393 cMono_IL1B L2
ENSG00000088035 ALG6 267635 sc-eQTL 2.69e-01 0.0889 0.0801 0.393 cMono_IL1B L2
ENSG00000116641 DOCK7 946824 sc-eQTL 7.67e-01 0.0251 0.0847 0.393 cMono_IL1B L2
ENSG00000125703 ATG4C 851078 sc-eQTL 5.02e-01 0.04 0.0595 0.393 cMono_IL1B L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 3.78e-01 0.0744 0.0843 0.393 cMono_IL1B L2
ENSG00000079739 PGM1 41799 sc-eQTL 1.71e-01 -0.122 0.0887 0.393 cMono_S100A L2
ENSG00000088035 ALG6 267635 sc-eQTL 7.84e-01 0.0248 0.0903 0.393 cMono_S100A L2
ENSG00000116641 DOCK7 946824 sc-eQTL 2.35e-01 0.0994 0.0834 0.393 cMono_S100A L2
ENSG00000125703 ATG4C 851078 sc-eQTL 1.74e-01 -0.0984 0.0722 0.393 cMono_S100A L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 4.43e-01 -0.0627 0.0816 0.393 cMono_S100A L2
ENSG00000079739 PGM1 41799 sc-eQTL 9.07e-01 0.0113 0.0968 0.388 gdT L2
ENSG00000088035 ALG6 267635 sc-eQTL 3.02e-01 -0.106 0.103 0.388 gdT L2
ENSG00000116641 DOCK7 946824 sc-eQTL 7.95e-01 0.0263 0.101 0.388 gdT L2
ENSG00000125703 ATG4C 851078 sc-eQTL 3.32e-01 0.0938 0.0964 0.388 gdT L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 7.48e-01 -0.0331 0.103 0.388 gdT L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 7.14e-01 0.037 0.101 0.388 gdT L2
ENSG00000079739 PGM1 41799 sc-eQTL 6.09e-01 -0.0462 0.09 0.393 intMono L2
ENSG00000088035 ALG6 267635 sc-eQTL 7.45e-01 -0.0273 0.0839 0.393 intMono L2
ENSG00000116641 DOCK7 946824 sc-eQTL 5.12e-01 0.0563 0.0856 0.393 intMono L2
ENSG00000125703 ATG4C 851078 sc-eQTL 1.36e-01 0.122 0.0814 0.393 intMono L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 5.39e-01 0.0554 0.09 0.393 intMono L2
ENSG00000079739 PGM1 41799 sc-eQTL 5.59e-01 -0.0477 0.0814 0.394 ncMono L2
ENSG00000088035 ALG6 267635 sc-eQTL 9.48e-01 0.00581 0.0895 0.394 ncMono L2
ENSG00000116641 DOCK7 946824 sc-eQTL 4.03e-01 0.0737 0.088 0.394 ncMono L2
ENSG00000125703 ATG4C 851078 sc-eQTL 3.62e-01 0.0751 0.0821 0.394 ncMono L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 5.05e-01 0.0574 0.086 0.394 ncMono L2
ENSG00000079739 PGM1 41799 sc-eQTL 1.69e-02 0.223 0.0926 0.393 pDC L2
ENSG00000088035 ALG6 267635 sc-eQTL 1.24e-01 0.141 0.0911 0.393 pDC L2
ENSG00000116641 DOCK7 946824 sc-eQTL 1.90e-01 0.123 0.0933 0.393 pDC L2
ENSG00000125703 ATG4C 851078 sc-eQTL 7.68e-02 0.148 0.0833 0.393 pDC L2
ENSG00000142856 ITGB3BP 41489 sc-eQTL 5.96e-01 -0.0501 0.0944 0.393 pDC L2
ENSG00000203965 EFCAB7 111838 sc-eQTL 9.91e-01 -0.000987 0.0836 0.393 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 41799 sc-eQTL 6.86e-01 -0.033 0.0814 0.393 B_Memory LOneK1K
ENSG00000088035 ALG6 267635 sc-eQTL 7.98e-01 0.0231 0.09 0.393 B_Memory LOneK1K
ENSG00000116641 DOCK7 946824 sc-eQTL 2.90e-01 -0.0826 0.0779 0.393 B_Memory LOneK1K
ENSG00000125703 ATG4C 851078 sc-eQTL 5.49e-01 0.0379 0.0631 0.393 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 41489 sc-eQTL 1.69e-01 -0.114 0.0826 0.393 B_Memory LOneK1K
ENSG00000203965 EFCAB7 111838 sc-eQTL 6.85e-01 -0.0351 0.0865 0.393 B_Memory LOneK1K
ENSG00000079739 PGM1 41799 sc-eQTL 9.56e-02 -0.141 0.0843 0.393 B_Naive LOneK1K
ENSG00000088035 ALG6 267635 sc-eQTL 2.07e-01 -0.11 0.087 0.393 B_Naive LOneK1K
ENSG00000116641 DOCK7 946824 sc-eQTL 7.96e-01 -0.0211 0.0815 0.393 B_Naive LOneK1K
ENSG00000125703 ATG4C 851078 sc-eQTL 6.38e-01 0.0293 0.0622 0.393 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 41489 sc-eQTL 2.68e-01 -0.0974 0.0877 0.393 B_Naive LOneK1K
ENSG00000203965 EFCAB7 111838 sc-eQTL 7.27e-01 0.0309 0.0884 0.393 B_Naive LOneK1K
ENSG00000079739 PGM1 41799 sc-eQTL 1.23e-01 -0.127 0.0818 0.393 CD14_Mono LOneK1K
ENSG00000088035 ALG6 267635 sc-eQTL 6.11e-01 0.0406 0.0796 0.393 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 946824 sc-eQTL 4.72e-01 0.0577 0.0801 0.393 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 851078 sc-eQTL 6.51e-01 -0.0251 0.0554 0.393 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 41489 sc-eQTL 8.20e-01 0.0186 0.082 0.393 CD14_Mono LOneK1K
ENSG00000079739 PGM1 41799 sc-eQTL 8.44e-01 -0.0155 0.0788 0.392 CD16_Mono LOneK1K
ENSG00000088035 ALG6 267635 sc-eQTL 7.97e-01 -0.023 0.0894 0.392 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 946824 sc-eQTL 4.28e-01 0.0702 0.0884 0.392 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 851078 sc-eQTL 1.52e-01 0.108 0.0751 0.392 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 41489 sc-eQTL 4.66e-01 0.064 0.0875 0.392 CD16_Mono LOneK1K
ENSG00000079739 PGM1 41799 sc-eQTL 4.48e-02 0.132 0.0653 0.39 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 267635 sc-eQTL 2.49e-01 0.0912 0.0789 0.39 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 946824 sc-eQTL 6.29e-02 0.132 0.0703 0.39 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 851078 sc-eQTL 6.87e-01 0.0285 0.0708 0.39 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 41489 sc-eQTL 3.53e-01 -0.078 0.0837 0.39 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 111838 sc-eQTL 1.88e-01 -0.122 0.0923 0.39 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000125703 ATG4C 851078 eQTL 0.0365 0.0369 0.0176 0.0 0.0 0.347

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 \N 946842 2.76e-07 1.42e-07 5.35e-08 2.87e-07 1.03e-07 8.89e-08 1.6e-07 5.53e-08 1.45e-07 6.08e-08 1.73e-07 9e-08 1.69e-07 8.13e-08 5.98e-08 7.3e-08 4.24e-08 1.33e-07 6.75e-08 5.61e-08 1.25e-07 1.24e-07 1.5e-07 2.64e-08 1.65e-07 1.26e-07 1.13e-07 1.04e-07 1.2e-07 1e-07 1.07e-07 4.85e-08 4.02e-08 9.52e-08 1.29e-07 2.95e-08 5.1e-08 6.31e-08 6.45e-08 6.43e-08 5.03e-08 1.46e-07 4.7e-08 1.55e-08 3.42e-08 6.83e-09 1.18e-07 2.23e-09 4.8e-08
ENSG00000203965 \N 111838 1.3e-05 1.48e-05 1.3e-06 9.8e-06 2.43e-06 5.89e-06 1.22e-05 2.15e-06 1.09e-05 5.41e-06 1.57e-05 6.53e-06 1.9e-05 5.17e-06 3.67e-06 6.36e-06 6.23e-06 9.3e-06 2.61e-06 3.14e-06 5.97e-06 1.1e-05 1.02e-05 3.36e-06 1.77e-05 3.88e-06 6.33e-06 4.85e-06 1.18e-05 9.19e-06 7.63e-06 1.07e-06 1.13e-06 3.31e-06 6.28e-06 2.36e-06 1.84e-06 1.95e-06 2.12e-06 1.03e-06 9.79e-07 1.73e-05 1.61e-06 1.79e-07 6.99e-07 1.7e-06 1.74e-06 7.19e-07 4.02e-07