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Genes within 1Mb (chr1:63620548:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 27137 sc-eQTL 1.94e-02 0.182 0.0772 0.618 B L1
ENSG00000088035 ALG6 252973 sc-eQTL 2.50e-01 -0.0932 0.0808 0.618 B L1
ENSG00000116641 DOCK7 932162 sc-eQTL 7.14e-01 -0.0298 0.081 0.618 B L1
ENSG00000125703 ATG4C 836416 sc-eQTL 4.95e-01 0.0385 0.0563 0.618 B L1
ENSG00000142856 ITGB3BP 26827 sc-eQTL 3.57e-01 -0.0825 0.0895 0.618 B L1
ENSG00000203965 EFCAB7 97176 sc-eQTL 1.32e-01 -0.138 0.0914 0.618 B L1
ENSG00000079739 PGM1 27137 sc-eQTL 3.65e-02 0.138 0.0657 0.618 CD4T L1
ENSG00000088035 ALG6 252973 sc-eQTL 1.19e-01 -0.114 0.0729 0.618 CD4T L1
ENSG00000116641 DOCK7 932162 sc-eQTL 3.59e-01 -0.0681 0.0741 0.618 CD4T L1
ENSG00000125703 ATG4C 836416 sc-eQTL 3.70e-01 0.0538 0.0598 0.618 CD4T L1
ENSG00000142856 ITGB3BP 26827 sc-eQTL 5.45e-02 -0.163 0.0843 0.618 CD4T L1
ENSG00000158966 CACHD1 -849581 sc-eQTL 7.59e-01 -0.0156 0.0507 0.618 CD4T L1
ENSG00000203965 EFCAB7 97176 sc-eQTL 1.73e-01 -0.104 0.076 0.618 CD4T L1
ENSG00000079739 PGM1 27137 sc-eQTL 5.80e-02 0.139 0.0727 0.618 CD8T L1
ENSG00000088035 ALG6 252973 sc-eQTL 5.15e-01 -0.0527 0.0807 0.618 CD8T L1
ENSG00000116641 DOCK7 932162 sc-eQTL 9.00e-01 0.0103 0.0819 0.618 CD8T L1
ENSG00000125703 ATG4C 836416 sc-eQTL 6.71e-01 0.0331 0.0777 0.618 CD8T L1
ENSG00000142856 ITGB3BP 26827 sc-eQTL 9.81e-03 -0.223 0.0856 0.618 CD8T L1
ENSG00000158966 CACHD1 -849581 sc-eQTL 1.23e-01 -0.0678 0.0438 0.618 CD8T L1
ENSG00000203965 EFCAB7 97176 sc-eQTL 4.78e-02 -0.171 0.0859 0.618 CD8T L1
ENSG00000079739 PGM1 27137 sc-eQTL 6.12e-01 -0.0421 0.0829 0.606 DC L1
ENSG00000088035 ALG6 252973 sc-eQTL 8.13e-02 -0.149 0.085 0.606 DC L1
ENSG00000116641 DOCK7 932162 sc-eQTL 4.76e-01 0.0626 0.0877 0.606 DC L1
ENSG00000125703 ATG4C 836416 sc-eQTL 2.41e-01 0.0806 0.0685 0.606 DC L1
ENSG00000142856 ITGB3BP 26827 sc-eQTL 6.50e-02 0.177 0.0952 0.606 DC L1
ENSG00000203965 EFCAB7 97176 sc-eQTL 7.34e-01 -0.0285 0.0835 0.606 DC L1
ENSG00000079739 PGM1 27137 sc-eQTL 9.65e-01 0.00353 0.0796 0.618 Mono L1
ENSG00000088035 ALG6 252973 sc-eQTL 7.70e-01 -0.0243 0.083 0.618 Mono L1
ENSG00000116641 DOCK7 932162 sc-eQTL 1.02e-01 -0.131 0.0798 0.618 Mono L1
ENSG00000125703 ATG4C 836416 sc-eQTL 7.22e-01 0.0193 0.0543 0.618 Mono L1
ENSG00000142856 ITGB3BP 26827 sc-eQTL 4.81e-01 -0.0604 0.0857 0.618 Mono L1
ENSG00000079739 PGM1 27137 sc-eQTL 3.44e-02 0.147 0.0691 0.616 NK L1
ENSG00000088035 ALG6 252973 sc-eQTL 1.15e-01 0.129 0.0814 0.616 NK L1
ENSG00000116641 DOCK7 932162 sc-eQTL 8.21e-01 -0.0153 0.0674 0.616 NK L1
ENSG00000125703 ATG4C 836416 sc-eQTL 5.83e-01 0.0398 0.0724 0.616 NK L1
ENSG00000142856 ITGB3BP 26827 sc-eQTL 2.69e-02 -0.198 0.0889 0.616 NK L1
ENSG00000203965 EFCAB7 97176 sc-eQTL 1.77e-02 -0.23 0.0964 0.616 NK L1
ENSG00000079739 PGM1 27137 sc-eQTL 4.17e-01 0.063 0.0775 0.618 Other_T L1
ENSG00000088035 ALG6 252973 sc-eQTL 7.75e-01 0.0223 0.0779 0.618 Other_T L1
ENSG00000116641 DOCK7 932162 sc-eQTL 7.12e-02 0.143 0.079 0.618 Other_T L1
ENSG00000125703 ATG4C 836416 sc-eQTL 5.10e-01 0.0454 0.0688 0.618 Other_T L1
ENSG00000142856 ITGB3BP 26827 sc-eQTL 9.31e-01 0.00528 0.0611 0.618 Other_T L1
ENSG00000203965 EFCAB7 97176 sc-eQTL 3.60e-01 -0.0864 0.0941 0.618 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 27137 sc-eQTL 4.17e-02 0.213 0.104 0.622 B_Activated L2
ENSG00000088035 ALG6 252973 sc-eQTL 4.31e-01 0.0794 0.101 0.622 B_Activated L2
ENSG00000116641 DOCK7 932162 sc-eQTL 2.39e-01 0.11 0.0934 0.622 B_Activated L2
ENSG00000125703 ATG4C 836416 sc-eQTL 4.75e-01 0.0705 0.0985 0.622 B_Activated L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 2.44e-01 -0.112 0.096 0.622 B_Activated L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 1.53e-01 -0.13 0.0907 0.622 B_Activated L2
ENSG00000079739 PGM1 27137 sc-eQTL 2.12e-01 0.115 0.0918 0.618 B_Intermediate L2
ENSG00000088035 ALG6 252973 sc-eQTL 2.50e-01 -0.108 0.0933 0.618 B_Intermediate L2
ENSG00000116641 DOCK7 932162 sc-eQTL 5.67e-01 0.0512 0.0893 0.618 B_Intermediate L2
ENSG00000125703 ATG4C 836416 sc-eQTL 2.71e-02 0.166 0.0748 0.618 B_Intermediate L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 1.93e-01 -0.117 0.0898 0.618 B_Intermediate L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 3.79e-01 -0.0785 0.0891 0.618 B_Intermediate L2
ENSG00000079739 PGM1 27137 sc-eQTL 6.38e-01 0.0425 0.0902 0.619 B_Memory L2
ENSG00000088035 ALG6 252973 sc-eQTL 8.70e-01 -0.015 0.0918 0.619 B_Memory L2
ENSG00000116641 DOCK7 932162 sc-eQTL 3.21e-01 0.0854 0.0859 0.619 B_Memory L2
ENSG00000125703 ATG4C 836416 sc-eQTL 2.43e-02 -0.183 0.0808 0.619 B_Memory L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 8.89e-01 0.0131 0.0936 0.619 B_Memory L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 1.97e-01 -0.12 0.0926 0.619 B_Memory L2
ENSG00000079739 PGM1 27137 sc-eQTL 2.69e-02 0.205 0.0919 0.618 B_Naive1 L2
ENSG00000088035 ALG6 252973 sc-eQTL 7.43e-01 -0.0307 0.0933 0.618 B_Naive1 L2
ENSG00000116641 DOCK7 932162 sc-eQTL 1.74e-01 -0.122 0.0891 0.618 B_Naive1 L2
ENSG00000125703 ATG4C 836416 sc-eQTL 3.97e-01 0.0584 0.0688 0.618 B_Naive1 L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 5.77e-01 -0.051 0.0913 0.618 B_Naive1 L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 5.19e-02 -0.189 0.0967 0.618 B_Naive1 L2
ENSG00000079739 PGM1 27137 sc-eQTL 2.08e-02 0.211 0.0906 0.618 B_Naive2 L2
ENSG00000088035 ALG6 252973 sc-eQTL 7.05e-01 0.0363 0.0956 0.618 B_Naive2 L2
ENSG00000116641 DOCK7 932162 sc-eQTL 8.21e-01 -0.0209 0.092 0.618 B_Naive2 L2
ENSG00000125703 ATG4C 836416 sc-eQTL 6.63e-01 -0.0387 0.0885 0.618 B_Naive2 L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 5.28e-01 -0.0607 0.0959 0.618 B_Naive2 L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 7.05e-01 0.0363 0.0955 0.618 B_Naive2 L2
ENSG00000079739 PGM1 27137 sc-eQTL 7.58e-02 -0.167 0.0936 0.611 CD4_CTL L2
ENSG00000088035 ALG6 252973 sc-eQTL 5.49e-01 -0.0599 0.0997 0.611 CD4_CTL L2
ENSG00000116641 DOCK7 932162 sc-eQTL 3.06e-02 0.188 0.0862 0.611 CD4_CTL L2
ENSG00000125703 ATG4C 836416 sc-eQTL 2.09e-01 0.113 0.0899 0.611 CD4_CTL L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 6.41e-01 0.0451 0.0965 0.611 CD4_CTL L2
ENSG00000158966 CACHD1 -849581 sc-eQTL 8.86e-01 -0.00505 0.0351 0.611 CD4_CTL L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 4.43e-01 -0.0704 0.0916 0.611 CD4_CTL L2
ENSG00000079739 PGM1 27137 sc-eQTL 2.72e-02 0.164 0.0737 0.618 CD4_Naive L2
ENSG00000088035 ALG6 252973 sc-eQTL 1.84e-01 -0.108 0.0807 0.618 CD4_Naive L2
ENSG00000116641 DOCK7 932162 sc-eQTL 5.30e-01 -0.0501 0.0796 0.618 CD4_Naive L2
ENSG00000125703 ATG4C 836416 sc-eQTL 6.59e-01 0.0311 0.0704 0.618 CD4_Naive L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 8.74e-02 -0.147 0.0854 0.618 CD4_Naive L2
ENSG00000158966 CACHD1 -849581 sc-eQTL 6.60e-01 -0.0225 0.0509 0.618 CD4_Naive L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 1.14e-01 -0.135 0.0849 0.618 CD4_Naive L2
ENSG00000079739 PGM1 27137 sc-eQTL 9.11e-01 0.00867 0.0774 0.618 CD4_TCM L2
ENSG00000088035 ALG6 252973 sc-eQTL 8.70e-01 -0.0147 0.0899 0.618 CD4_TCM L2
ENSG00000116641 DOCK7 932162 sc-eQTL 1.93e-01 -0.104 0.0793 0.618 CD4_TCM L2
ENSG00000125703 ATG4C 836416 sc-eQTL 6.88e-01 -0.0311 0.0775 0.618 CD4_TCM L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 4.98e-02 -0.179 0.0906 0.618 CD4_TCM L2
ENSG00000158966 CACHD1 -849581 sc-eQTL 3.65e-01 -0.0656 0.0723 0.618 CD4_TCM L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 9.54e-01 -0.00513 0.0884 0.618 CD4_TCM L2
ENSG00000079739 PGM1 27137 sc-eQTL 9.46e-02 0.153 0.0909 0.618 CD4_TEM L2
ENSG00000088035 ALG6 252973 sc-eQTL 1.65e-01 -0.128 0.0915 0.618 CD4_TEM L2
ENSG00000116641 DOCK7 932162 sc-eQTL 1.96e-01 -0.116 0.0893 0.618 CD4_TEM L2
ENSG00000125703 ATG4C 836416 sc-eQTL 1.55e-01 0.124 0.0867 0.618 CD4_TEM L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 1.25e-01 -0.138 0.0894 0.618 CD4_TEM L2
ENSG00000158966 CACHD1 -849581 sc-eQTL 8.74e-01 -0.00881 0.0556 0.618 CD4_TEM L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 5.69e-01 0.053 0.0931 0.618 CD4_TEM L2
ENSG00000079739 PGM1 27137 sc-eQTL 8.72e-01 -0.0137 0.0851 0.618 CD8_CTL L2
ENSG00000088035 ALG6 252973 sc-eQTL 1.69e-01 -0.124 0.0901 0.618 CD8_CTL L2
ENSG00000116641 DOCK7 932162 sc-eQTL 9.81e-01 -0.0021 0.0859 0.618 CD8_CTL L2
ENSG00000125703 ATG4C 836416 sc-eQTL 5.19e-01 -0.059 0.0913 0.618 CD8_CTL L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 4.15e-01 -0.0775 0.0949 0.618 CD8_CTL L2
ENSG00000158966 CACHD1 -849581 sc-eQTL 4.36e-03 -0.114 0.0395 0.618 CD8_CTL L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 1.39e-01 -0.144 0.0969 0.618 CD8_CTL L2
ENSG00000079739 PGM1 27137 sc-eQTL 1.83e-02 0.199 0.0837 0.618 CD8_Naive L2
ENSG00000088035 ALG6 252973 sc-eQTL 3.49e-01 0.0822 0.0876 0.618 CD8_Naive L2
ENSG00000116641 DOCK7 932162 sc-eQTL 9.77e-01 -0.00262 0.0907 0.618 CD8_Naive L2
ENSG00000125703 ATG4C 836416 sc-eQTL 4.98e-01 0.0591 0.087 0.618 CD8_Naive L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 6.13e-04 -0.298 0.0858 0.618 CD8_Naive L2
ENSG00000158966 CACHD1 -849581 sc-eQTL 1.48e-01 -0.0884 0.0609 0.618 CD8_Naive L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 6.62e-01 -0.0364 0.0831 0.618 CD8_Naive L2
ENSG00000079739 PGM1 27137 sc-eQTL 4.97e-02 0.182 0.0923 0.609 CD8_TCM L2
ENSG00000088035 ALG6 252973 sc-eQTL 9.12e-01 -0.0105 0.0943 0.609 CD8_TCM L2
ENSG00000116641 DOCK7 932162 sc-eQTL 7.00e-01 0.0355 0.092 0.609 CD8_TCM L2
ENSG00000125703 ATG4C 836416 sc-eQTL 5.63e-01 -0.0545 0.0941 0.609 CD8_TCM L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 7.84e-01 0.0251 0.0915 0.609 CD8_TCM L2
ENSG00000158966 CACHD1 -849581 sc-eQTL 7.86e-01 0.0131 0.048 0.609 CD8_TCM L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 3.92e-01 -0.0798 0.0931 0.609 CD8_TCM L2
ENSG00000079739 PGM1 27137 sc-eQTL 2.34e-01 -0.114 0.0953 0.61 CD8_TEM L2
ENSG00000088035 ALG6 252973 sc-eQTL 8.43e-01 -0.019 0.096 0.61 CD8_TEM L2
ENSG00000116641 DOCK7 932162 sc-eQTL 8.48e-01 0.0179 0.0931 0.61 CD8_TEM L2
ENSG00000125703 ATG4C 836416 sc-eQTL 7.07e-01 0.0337 0.0895 0.61 CD8_TEM L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 2.20e-01 -0.119 0.0965 0.61 CD8_TEM L2
ENSG00000158966 CACHD1 -849581 sc-eQTL 8.26e-02 -0.0342 0.0196 0.61 CD8_TEM L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 2.15e-01 -0.117 0.0936 0.61 CD8_TEM L2
ENSG00000079739 PGM1 27137 sc-eQTL 7.97e-01 0.0236 0.0916 0.615 MAIT L2
ENSG00000088035 ALG6 252973 sc-eQTL 7.12e-01 -0.0336 0.0906 0.615 MAIT L2
ENSG00000116641 DOCK7 932162 sc-eQTL 1.21e-01 0.134 0.0864 0.615 MAIT L2
ENSG00000125703 ATG4C 836416 sc-eQTL 7.29e-01 0.0318 0.0916 0.615 MAIT L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 5.63e-01 -0.0531 0.0917 0.615 MAIT L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 8.58e-01 -0.0169 0.0945 0.615 MAIT L2
ENSG00000079739 PGM1 27137 sc-eQTL 2.86e-01 0.0963 0.0899 0.613 NK_CD56bright L2
ENSG00000088035 ALG6 252973 sc-eQTL 9.54e-01 0.00532 0.0925 0.613 NK_CD56bright L2
ENSG00000116641 DOCK7 932162 sc-eQTL 8.15e-01 0.0188 0.0801 0.613 NK_CD56bright L2
ENSG00000125703 ATG4C 836416 sc-eQTL 8.53e-02 0.154 0.0888 0.613 NK_CD56bright L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 8.94e-01 -0.0125 0.0932 0.613 NK_CD56bright L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 3.48e-01 -0.0864 0.0917 0.613 NK_CD56bright L2
ENSG00000079739 PGM1 27137 sc-eQTL 3.19e-01 0.0715 0.0716 0.619 NK_CD56dim L2
ENSG00000088035 ALG6 252973 sc-eQTL 8.94e-01 0.0121 0.0911 0.619 NK_CD56dim L2
ENSG00000116641 DOCK7 932162 sc-eQTL 4.69e-01 -0.0575 0.0792 0.619 NK_CD56dim L2
ENSG00000125703 ATG4C 836416 sc-eQTL 3.36e-01 -0.0775 0.0803 0.619 NK_CD56dim L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 6.04e-02 -0.172 0.0908 0.619 NK_CD56dim L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 3.46e-03 -0.287 0.097 0.619 NK_CD56dim L2
ENSG00000079739 PGM1 27137 sc-eQTL 4.96e-01 0.0682 0.0999 0.61 NK_HLA L2
ENSG00000088035 ALG6 252973 sc-eQTL 8.42e-02 0.179 0.103 0.61 NK_HLA L2
ENSG00000116641 DOCK7 932162 sc-eQTL 5.57e-01 -0.0466 0.0793 0.61 NK_HLA L2
ENSG00000125703 ATG4C 836416 sc-eQTL 3.00e-01 -0.0957 0.092 0.61 NK_HLA L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 5.78e-02 -0.183 0.096 0.61 NK_HLA L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 3.59e-01 0.0847 0.0921 0.61 NK_HLA L2
ENSG00000079739 PGM1 27137 sc-eQTL 4.40e-01 0.0609 0.0788 0.619 NK_cytokine L2
ENSG00000088035 ALG6 252973 sc-eQTL 1.48e-01 0.129 0.0887 0.619 NK_cytokine L2
ENSG00000116641 DOCK7 932162 sc-eQTL 8.89e-01 0.0116 0.0826 0.619 NK_cytokine L2
ENSG00000125703 ATG4C 836416 sc-eQTL 6.09e-02 0.158 0.0838 0.619 NK_cytokine L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 7.44e-01 -0.0286 0.0875 0.619 NK_cytokine L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 2.23e-01 -0.114 0.0929 0.619 NK_cytokine L2
ENSG00000079739 PGM1 27137 sc-eQTL 2.39e-01 0.13 0.11 0.619 PB L2
ENSG00000088035 ALG6 252973 sc-eQTL 5.68e-01 0.0665 0.116 0.619 PB L2
ENSG00000116641 DOCK7 932162 sc-eQTL 2.07e-01 -0.157 0.123 0.619 PB L2
ENSG00000125703 ATG4C 836416 sc-eQTL 4.87e-01 0.0754 0.108 0.619 PB L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 1.11e-02 -0.271 0.105 0.619 PB L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 3.20e-02 0.253 0.116 0.619 PB L2
ENSG00000079739 PGM1 27137 sc-eQTL 7.21e-01 -0.0307 0.0858 0.615 Pro_T L2
ENSG00000088035 ALG6 252973 sc-eQTL 1.46e-01 -0.127 0.0869 0.615 Pro_T L2
ENSG00000116641 DOCK7 932162 sc-eQTL 6.46e-01 0.0403 0.0876 0.615 Pro_T L2
ENSG00000125703 ATG4C 836416 sc-eQTL 1.37e-01 0.114 0.0763 0.615 Pro_T L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 6.28e-01 -0.0373 0.0769 0.615 Pro_T L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 8.49e-01 -0.0171 0.0894 0.615 Pro_T L2
ENSG00000079739 PGM1 27137 sc-eQTL 8.91e-01 -0.0122 0.0887 0.618 Treg L2
ENSG00000088035 ALG6 252973 sc-eQTL 4.77e-01 0.0675 0.0947 0.618 Treg L2
ENSG00000116641 DOCK7 932162 sc-eQTL 9.91e-01 0.000946 0.0871 0.618 Treg L2
ENSG00000125703 ATG4C 836416 sc-eQTL 9.40e-01 0.00668 0.089 0.618 Treg L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 3.30e-01 0.0908 0.0929 0.618 Treg L2
ENSG00000158966 CACHD1 -849581 sc-eQTL 7.42e-01 -0.0231 0.0703 0.618 Treg L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 6.43e-01 -0.0413 0.089 0.618 Treg L2
ENSG00000079739 PGM1 27137 sc-eQTL 7.31e-01 -0.031 0.09 0.595 cDC L2
ENSG00000088035 ALG6 252973 sc-eQTL 1.46e-01 -0.132 0.0908 0.595 cDC L2
ENSG00000116641 DOCK7 932162 sc-eQTL 1.65e-01 0.124 0.0891 0.595 cDC L2
ENSG00000125703 ATG4C 836416 sc-eQTL 5.34e-02 0.15 0.077 0.595 cDC L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 3.34e-03 0.286 0.0963 0.595 cDC L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 7.25e-01 0.0279 0.0792 0.595 cDC L2
ENSG00000079739 PGM1 27137 sc-eQTL 9.05e-01 -0.00994 0.0831 0.618 cMono_IL1B L2
ENSG00000088035 ALG6 252973 sc-eQTL 4.34e-01 -0.0651 0.0831 0.618 cMono_IL1B L2
ENSG00000116641 DOCK7 932162 sc-eQTL 5.94e-02 -0.165 0.087 0.618 cMono_IL1B L2
ENSG00000125703 ATG4C 836416 sc-eQTL 9.28e-01 0.00555 0.0617 0.618 cMono_IL1B L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 5.34e-01 -0.0544 0.0873 0.618 cMono_IL1B L2
ENSG00000079739 PGM1 27137 sc-eQTL 9.93e-01 -0.00079 0.0931 0.618 cMono_S100A L2
ENSG00000088035 ALG6 252973 sc-eQTL 9.10e-01 -0.0107 0.0944 0.618 cMono_S100A L2
ENSG00000116641 DOCK7 932162 sc-eQTL 7.59e-01 -0.0268 0.0875 0.618 cMono_S100A L2
ENSG00000125703 ATG4C 836416 sc-eQTL 4.33e-01 0.0595 0.0756 0.618 cMono_S100A L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 6.69e-01 0.0366 0.0854 0.618 cMono_S100A L2
ENSG00000079739 PGM1 27137 sc-eQTL 3.40e-01 0.101 0.106 0.603 gdT L2
ENSG00000088035 ALG6 252973 sc-eQTL 8.27e-01 0.0248 0.113 0.603 gdT L2
ENSG00000116641 DOCK7 932162 sc-eQTL 2.31e-01 0.133 0.111 0.603 gdT L2
ENSG00000125703 ATG4C 836416 sc-eQTL 4.29e-01 -0.084 0.106 0.603 gdT L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 7.92e-01 -0.0298 0.113 0.603 gdT L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 7.62e-01 0.0337 0.111 0.603 gdT L2
ENSG00000079739 PGM1 27137 sc-eQTL 5.35e-01 -0.0581 0.0935 0.613 intMono L2
ENSG00000088035 ALG6 252973 sc-eQTL 3.52e-01 0.0812 0.087 0.613 intMono L2
ENSG00000116641 DOCK7 932162 sc-eQTL 9.03e-01 -0.0109 0.089 0.613 intMono L2
ENSG00000125703 ATG4C 836416 sc-eQTL 8.27e-01 -0.0186 0.085 0.613 intMono L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 3.59e-01 -0.0858 0.0934 0.613 intMono L2
ENSG00000079739 PGM1 27137 sc-eQTL 4.56e-01 0.0658 0.0881 0.618 ncMono L2
ENSG00000088035 ALG6 252973 sc-eQTL 5.63e-01 -0.0561 0.0968 0.618 ncMono L2
ENSG00000116641 DOCK7 932162 sc-eQTL 3.56e-01 -0.0881 0.0952 0.618 ncMono L2
ENSG00000125703 ATG4C 836416 sc-eQTL 7.62e-01 -0.027 0.0891 0.618 ncMono L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 1.16e-01 -0.146 0.0926 0.618 ncMono L2
ENSG00000079739 PGM1 27137 sc-eQTL 6.76e-01 -0.0444 0.106 0.59 pDC L2
ENSG00000088035 ALG6 252973 sc-eQTL 5.92e-01 -0.0553 0.103 0.59 pDC L2
ENSG00000116641 DOCK7 932162 sc-eQTL 1.29e-01 -0.16 0.105 0.59 pDC L2
ENSG00000125703 ATG4C 836416 sc-eQTL 3.66e-01 -0.0856 0.0943 0.59 pDC L2
ENSG00000142856 ITGB3BP 26827 sc-eQTL 9.93e-01 -0.00097 0.106 0.59 pDC L2
ENSG00000203965 EFCAB7 97176 sc-eQTL 8.87e-01 -0.0133 0.094 0.59 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 27137 sc-eQTL 1.41e-01 0.127 0.0858 0.618 B_Memory LOneK1K
ENSG00000088035 ALG6 252973 sc-eQTL 2.75e-01 -0.104 0.0951 0.618 B_Memory LOneK1K
ENSG00000116641 DOCK7 932162 sc-eQTL 5.37e-01 0.0512 0.0827 0.618 B_Memory LOneK1K
ENSG00000125703 ATG4C 836416 sc-eQTL 8.42e-01 0.0134 0.0669 0.618 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 26827 sc-eQTL 3.01e-01 -0.0909 0.0877 0.618 B_Memory LOneK1K
ENSG00000203965 EFCAB7 97176 sc-eQTL 9.61e-02 -0.152 0.091 0.618 B_Memory LOneK1K
ENSG00000079739 PGM1 27137 sc-eQTL 1.16e-03 0.291 0.0884 0.618 B_Naive LOneK1K
ENSG00000088035 ALG6 252973 sc-eQTL 4.83e-01 -0.0655 0.0932 0.618 B_Naive LOneK1K
ENSG00000116641 DOCK7 932162 sc-eQTL 3.21e-01 -0.0865 0.0869 0.618 B_Naive LOneK1K
ENSG00000125703 ATG4C 836416 sc-eQTL 8.87e-01 0.00947 0.0665 0.618 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 26827 sc-eQTL 8.39e-01 -0.0191 0.094 0.618 B_Naive LOneK1K
ENSG00000203965 EFCAB7 97176 sc-eQTL 1.67e-01 -0.13 0.094 0.618 B_Naive LOneK1K
ENSG00000079739 PGM1 27137 sc-eQTL 8.95e-01 -0.0113 0.0851 0.618 CD14_Mono LOneK1K
ENSG00000088035 ALG6 252973 sc-eQTL 3.83e-01 -0.0719 0.0822 0.618 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 932162 sc-eQTL 1.21e-01 -0.129 0.0825 0.618 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 836416 sc-eQTL 6.39e-01 0.027 0.0573 0.618 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 26827 sc-eQTL 1.00e+00 -4.12e-05 0.0848 0.618 CD14_Mono LOneK1K
ENSG00000079739 PGM1 27137 sc-eQTL 6.14e-01 -0.0418 0.0827 0.616 CD16_Mono LOneK1K
ENSG00000088035 ALG6 252973 sc-eQTL 5.71e-01 0.0533 0.0939 0.616 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 932162 sc-eQTL 1.62e-01 -0.13 0.0925 0.616 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 836416 sc-eQTL 7.00e-01 -0.0306 0.0792 0.616 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 26827 sc-eQTL 8.86e-02 -0.156 0.0914 0.616 CD16_Mono LOneK1K
ENSG00000079739 PGM1 27137 sc-eQTL 1.38e-01 0.105 0.0708 0.619 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 252973 sc-eQTL 1.82e-01 0.114 0.0851 0.619 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 932162 sc-eQTL 8.11e-01 -0.0183 0.0765 0.619 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 836416 sc-eQTL 8.93e-01 0.0103 0.0764 0.619 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 26827 sc-eQTL 2.65e-02 -0.2 0.0895 0.619 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 97176 sc-eQTL 3.93e-02 -0.205 0.099 0.619 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 27137 eQTL 1.24e-07 0.0979 0.0184 0.0 0.0 0.364
ENSG00000142856 ITGB3BP 26827 eQTL 4.19e-08 0.166 0.0301 0.0 0.0 0.364

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 27137 1.49e-05 1.87e-05 2.44e-06 9e-06 2.4e-06 6.33e-06 2.08e-05 2.44e-06 1.53e-05 7.31e-06 2.01e-05 7.03e-06 2.87e-05 6.61e-06 4.98e-06 9.01e-06 8.14e-06 1.19e-05 4.21e-06 3.61e-06 7.19e-06 1.44e-05 1.43e-05 4.21e-06 2.58e-05 5.14e-06 7.69e-06 6.38e-06 1.69e-05 1.45e-05 1.18e-05 1.09e-06 1.45e-06 3.7e-06 6.09e-06 2.85e-06 1.72e-06 2.25e-06 2.7e-06 2e-06 1.01e-06 2.08e-05 2.48e-06 1.44e-07 8.89e-07 2.32e-06 1.82e-06 8.29e-07 4.56e-07
ENSG00000142856 ITGB3BP 26827 1.49e-05 1.9e-05 2.43e-06 9e-06 2.43e-06 6.32e-06 2.09e-05 2.48e-06 1.53e-05 7.35e-06 2.04e-05 7.07e-06 2.88e-05 6.73e-06 5.06e-06 9.01e-06 8.14e-06 1.18e-05 4.25e-06 3.59e-06 7.18e-06 1.45e-05 1.47e-05 4.21e-06 2.59e-05 5.11e-06 7.68e-06 6.41e-06 1.69e-05 1.46e-05 1.18e-05 1.09e-06 1.45e-06 3.74e-06 6.02e-06 2.9e-06 1.77e-06 2.29e-06 2.73e-06 2.03e-06 9.92e-07 2.12e-05 2.48e-06 1.44e-07 9.58e-07 2.32e-06 1.86e-06 8.27e-07 4.43e-07