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Genes within 1Mb (chr1:63614447:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 21036 sc-eQTL 1.50e-02 0.19 0.0776 0.62 B L1
ENSG00000088035 ALG6 246872 sc-eQTL 2.87e-01 -0.0867 0.0813 0.62 B L1
ENSG00000116641 DOCK7 926061 sc-eQTL 6.33e-01 -0.039 0.0815 0.62 B L1
ENSG00000125703 ATG4C 830315 sc-eQTL 6.05e-01 0.0293 0.0566 0.62 B L1
ENSG00000142856 ITGB3BP 20726 sc-eQTL 5.05e-01 -0.0602 0.0901 0.62 B L1
ENSG00000203965 EFCAB7 91075 sc-eQTL 1.22e-01 -0.143 0.0919 0.62 B L1
ENSG00000079739 PGM1 21036 sc-eQTL 3.33e-02 0.142 0.0662 0.62 CD4T L1
ENSG00000088035 ALG6 246872 sc-eQTL 1.76e-01 -0.0998 0.0736 0.62 CD4T L1
ENSG00000116641 DOCK7 926061 sc-eQTL 3.54e-01 -0.0693 0.0746 0.62 CD4T L1
ENSG00000125703 ATG4C 830315 sc-eQTL 4.06e-01 0.0502 0.0603 0.62 CD4T L1
ENSG00000142856 ITGB3BP 20726 sc-eQTL 5.17e-02 -0.166 0.085 0.62 CD4T L1
ENSG00000158966 CACHD1 -855682 sc-eQTL 9.20e-01 -0.00512 0.0511 0.62 CD4T L1
ENSG00000203965 EFCAB7 91075 sc-eQTL 2.04e-01 -0.0976 0.0767 0.62 CD4T L1
ENSG00000079739 PGM1 21036 sc-eQTL 5.02e-02 0.144 0.0731 0.62 CD8T L1
ENSG00000088035 ALG6 246872 sc-eQTL 5.42e-01 -0.0497 0.0813 0.62 CD8T L1
ENSG00000116641 DOCK7 926061 sc-eQTL 7.70e-01 0.0241 0.0824 0.62 CD8T L1
ENSG00000125703 ATG4C 830315 sc-eQTL 6.93e-01 0.031 0.0783 0.62 CD8T L1
ENSG00000142856 ITGB3BP 20726 sc-eQTL 1.12e-02 -0.221 0.0862 0.62 CD8T L1
ENSG00000158966 CACHD1 -855682 sc-eQTL 1.69e-01 -0.0608 0.0441 0.62 CD8T L1
ENSG00000203965 EFCAB7 91075 sc-eQTL 5.42e-02 -0.167 0.0865 0.62 CD8T L1
ENSG00000079739 PGM1 21036 sc-eQTL 6.99e-01 -0.0325 0.0838 0.608 DC L1
ENSG00000088035 ALG6 246872 sc-eQTL 9.41e-02 -0.145 0.0859 0.608 DC L1
ENSG00000116641 DOCK7 926061 sc-eQTL 4.69e-01 0.0642 0.0886 0.608 DC L1
ENSG00000125703 ATG4C 830315 sc-eQTL 2.20e-01 0.085 0.0691 0.608 DC L1
ENSG00000142856 ITGB3BP 20726 sc-eQTL 7.35e-02 0.173 0.0962 0.608 DC L1
ENSG00000203965 EFCAB7 91075 sc-eQTL 9.73e-01 -0.00284 0.0844 0.608 DC L1
ENSG00000079739 PGM1 21036 sc-eQTL 8.33e-01 -0.0169 0.0802 0.62 Mono L1
ENSG00000088035 ALG6 246872 sc-eQTL 6.03e-01 -0.0435 0.0836 0.62 Mono L1
ENSG00000116641 DOCK7 926061 sc-eQTL 1.22e-01 -0.125 0.0805 0.62 Mono L1
ENSG00000125703 ATG4C 830315 sc-eQTL 6.43e-01 0.0254 0.0547 0.62 Mono L1
ENSG00000142856 ITGB3BP 20726 sc-eQTL 5.59e-01 -0.0506 0.0864 0.62 Mono L1
ENSG00000079739 PGM1 21036 sc-eQTL 2.26e-02 0.159 0.0692 0.618 NK L1
ENSG00000088035 ALG6 246872 sc-eQTL 1.06e-01 0.133 0.0817 0.618 NK L1
ENSG00000116641 DOCK7 926061 sc-eQTL 8.62e-01 -0.0118 0.0677 0.618 NK L1
ENSG00000125703 ATG4C 830315 sc-eQTL 6.71e-01 0.0309 0.0727 0.618 NK L1
ENSG00000142856 ITGB3BP 20726 sc-eQTL 3.31e-02 -0.192 0.0894 0.618 NK L1
ENSG00000203965 EFCAB7 91075 sc-eQTL 1.34e-02 -0.241 0.0967 0.618 NK L1
ENSG00000079739 PGM1 21036 sc-eQTL 4.52e-01 0.0589 0.0781 0.62 Other_T L1
ENSG00000088035 ALG6 246872 sc-eQTL 7.36e-01 0.0265 0.0786 0.62 Other_T L1
ENSG00000116641 DOCK7 926061 sc-eQTL 7.54e-02 0.142 0.0796 0.62 Other_T L1
ENSG00000125703 ATG4C 830315 sc-eQTL 4.35e-01 0.0542 0.0694 0.62 Other_T L1
ENSG00000142856 ITGB3BP 20726 sc-eQTL 9.73e-01 0.00209 0.0616 0.62 Other_T L1
ENSG00000203965 EFCAB7 91075 sc-eQTL 3.63e-01 -0.0864 0.0948 0.62 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 21036 sc-eQTL 4.56e-02 0.211 0.105 0.625 B_Activated L2
ENSG00000088035 ALG6 246872 sc-eQTL 3.35e-01 0.0979 0.101 0.625 B_Activated L2
ENSG00000116641 DOCK7 926061 sc-eQTL 2.36e-01 0.112 0.0942 0.625 B_Activated L2
ENSG00000125703 ATG4C 830315 sc-eQTL 5.49e-01 0.0597 0.0993 0.625 B_Activated L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 3.64e-01 -0.0883 0.0969 0.625 B_Activated L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 1.23e-01 -0.141 0.0914 0.625 B_Activated L2
ENSG00000079739 PGM1 21036 sc-eQTL 2.41e-01 0.109 0.0926 0.62 B_Intermediate L2
ENSG00000088035 ALG6 246872 sc-eQTL 3.32e-01 -0.0916 0.0941 0.62 B_Intermediate L2
ENSG00000116641 DOCK7 926061 sc-eQTL 5.76e-01 0.0504 0.09 0.62 B_Intermediate L2
ENSG00000125703 ATG4C 830315 sc-eQTL 3.45e-02 0.161 0.0755 0.62 B_Intermediate L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 2.35e-01 -0.108 0.0906 0.62 B_Intermediate L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 3.19e-01 -0.0897 0.0898 0.62 B_Intermediate L2
ENSG00000079739 PGM1 21036 sc-eQTL 6.28e-01 0.0441 0.0909 0.621 B_Memory L2
ENSG00000088035 ALG6 246872 sc-eQTL 9.48e-01 -0.00605 0.0924 0.621 B_Memory L2
ENSG00000116641 DOCK7 926061 sc-eQTL 2.67e-01 0.0962 0.0864 0.621 B_Memory L2
ENSG00000125703 ATG4C 830315 sc-eQTL 2.89e-02 -0.179 0.0815 0.621 B_Memory L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 8.57e-01 0.017 0.0943 0.621 B_Memory L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 1.37e-01 -0.139 0.0931 0.621 B_Memory L2
ENSG00000079739 PGM1 21036 sc-eQTL 1.26e-02 0.232 0.0922 0.62 B_Naive1 L2
ENSG00000088035 ALG6 246872 sc-eQTL 6.99e-01 -0.0364 0.094 0.62 B_Naive1 L2
ENSG00000116641 DOCK7 926061 sc-eQTL 1.01e-01 -0.147 0.0895 0.62 B_Naive1 L2
ENSG00000125703 ATG4C 830315 sc-eQTL 3.13e-01 0.07 0.0692 0.62 B_Naive1 L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 7.09e-01 -0.0343 0.092 0.62 B_Naive1 L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 1.13e-01 -0.156 0.0976 0.62 B_Naive1 L2
ENSG00000079739 PGM1 21036 sc-eQTL 3.38e-02 0.195 0.0913 0.62 B_Naive2 L2
ENSG00000088035 ALG6 246872 sc-eQTL 7.02e-01 0.0368 0.0961 0.62 B_Naive2 L2
ENSG00000116641 DOCK7 926061 sc-eQTL 9.98e-01 -0.000216 0.0925 0.62 B_Naive2 L2
ENSG00000125703 ATG4C 830315 sc-eQTL 4.25e-01 -0.0711 0.0889 0.62 B_Naive2 L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 5.98e-01 -0.051 0.0965 0.62 B_Naive2 L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 8.60e-01 0.0169 0.0961 0.62 B_Naive2 L2
ENSG00000079739 PGM1 21036 sc-eQTL 6.70e-02 -0.174 0.0943 0.614 CD4_CTL L2
ENSG00000088035 ALG6 246872 sc-eQTL 5.36e-01 -0.0622 0.1 0.614 CD4_CTL L2
ENSG00000116641 DOCK7 926061 sc-eQTL 2.82e-02 0.192 0.0868 0.614 CD4_CTL L2
ENSG00000125703 ATG4C 830315 sc-eQTL 1.12e-01 0.144 0.0904 0.614 CD4_CTL L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 9.17e-01 0.0102 0.0972 0.614 CD4_CTL L2
ENSG00000158966 CACHD1 -855682 sc-eQTL 8.85e-01 -0.00513 0.0353 0.614 CD4_CTL L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 5.45e-01 -0.056 0.0923 0.614 CD4_CTL L2
ENSG00000079739 PGM1 21036 sc-eQTL 2.81e-02 0.164 0.0743 0.62 CD4_Naive L2
ENSG00000088035 ALG6 246872 sc-eQTL 2.11e-01 -0.102 0.0814 0.62 CD4_Naive L2
ENSG00000116641 DOCK7 926061 sc-eQTL 4.79e-01 -0.0569 0.0802 0.62 CD4_Naive L2
ENSG00000125703 ATG4C 830315 sc-eQTL 7.64e-01 0.0213 0.0709 0.62 CD4_Naive L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 8.23e-02 -0.15 0.0861 0.62 CD4_Naive L2
ENSG00000158966 CACHD1 -855682 sc-eQTL 8.33e-01 -0.0108 0.0513 0.62 CD4_Naive L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 9.86e-02 -0.142 0.0855 0.62 CD4_Naive L2
ENSG00000079739 PGM1 21036 sc-eQTL 7.38e-01 0.0261 0.0779 0.62 CD4_TCM L2
ENSG00000088035 ALG6 246872 sc-eQTL 9.67e-01 0.00371 0.0905 0.62 CD4_TCM L2
ENSG00000116641 DOCK7 926061 sc-eQTL 2.24e-01 -0.0975 0.0799 0.62 CD4_TCM L2
ENSG00000125703 ATG4C 830315 sc-eQTL 5.93e-01 -0.0418 0.0781 0.62 CD4_TCM L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 8.32e-02 -0.159 0.0914 0.62 CD4_TCM L2
ENSG00000158966 CACHD1 -855682 sc-eQTL 2.90e-01 -0.0771 0.0728 0.62 CD4_TCM L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 8.50e-01 0.0169 0.0891 0.62 CD4_TCM L2
ENSG00000079739 PGM1 21036 sc-eQTL 8.91e-02 0.156 0.0916 0.62 CD4_TEM L2
ENSG00000088035 ALG6 246872 sc-eQTL 2.14e-01 -0.115 0.0924 0.62 CD4_TEM L2
ENSG00000116641 DOCK7 926061 sc-eQTL 2.12e-01 -0.113 0.09 0.62 CD4_TEM L2
ENSG00000125703 ATG4C 830315 sc-eQTL 2.24e-01 0.107 0.0875 0.62 CD4_TEM L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 1.34e-01 -0.136 0.0901 0.62 CD4_TEM L2
ENSG00000158966 CACHD1 -855682 sc-eQTL 8.26e-01 -0.0123 0.056 0.62 CD4_TEM L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 7.43e-01 0.0308 0.0938 0.62 CD4_TEM L2
ENSG00000079739 PGM1 21036 sc-eQTL 8.12e-01 -0.0204 0.0855 0.62 CD8_CTL L2
ENSG00000088035 ALG6 246872 sc-eQTL 1.82e-01 -0.121 0.0906 0.62 CD8_CTL L2
ENSG00000116641 DOCK7 926061 sc-eQTL 9.86e-01 0.0015 0.0863 0.62 CD8_CTL L2
ENSG00000125703 ATG4C 830315 sc-eQTL 5.04e-01 -0.0614 0.0918 0.62 CD8_CTL L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 4.22e-01 -0.0767 0.0954 0.62 CD8_CTL L2
ENSG00000158966 CACHD1 -855682 sc-eQTL 3.74e-03 -0.116 0.0397 0.62 CD8_CTL L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 1.60e-01 -0.137 0.0974 0.62 CD8_CTL L2
ENSG00000079739 PGM1 21036 sc-eQTL 9.27e-03 0.22 0.0839 0.62 CD8_Naive L2
ENSG00000088035 ALG6 246872 sc-eQTL 4.27e-01 0.0702 0.0881 0.62 CD8_Naive L2
ENSG00000116641 DOCK7 926061 sc-eQTL 8.98e-01 0.0117 0.0913 0.62 CD8_Naive L2
ENSG00000125703 ATG4C 830315 sc-eQTL 4.94e-01 0.06 0.0875 0.62 CD8_Naive L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 1.22e-03 -0.284 0.0865 0.62 CD8_Naive L2
ENSG00000158966 CACHD1 -855682 sc-eQTL 1.80e-01 -0.0824 0.0612 0.62 CD8_Naive L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 7.48e-01 -0.0269 0.0836 0.62 CD8_Naive L2
ENSG00000079739 PGM1 21036 sc-eQTL 7.09e-02 0.169 0.0928 0.613 CD8_TCM L2
ENSG00000088035 ALG6 246872 sc-eQTL 9.48e-01 0.00614 0.0948 0.613 CD8_TCM L2
ENSG00000116641 DOCK7 926061 sc-eQTL 6.85e-01 0.0376 0.0925 0.613 CD8_TCM L2
ENSG00000125703 ATG4C 830315 sc-eQTL 4.72e-01 -0.0682 0.0945 0.613 CD8_TCM L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 8.07e-01 0.0225 0.0919 0.613 CD8_TCM L2
ENSG00000158966 CACHD1 -855682 sc-eQTL 8.04e-01 0.012 0.0483 0.613 CD8_TCM L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 3.81e-01 -0.0821 0.0935 0.613 CD8_TCM L2
ENSG00000079739 PGM1 21036 sc-eQTL 2.27e-01 -0.116 0.0957 0.612 CD8_TEM L2
ENSG00000088035 ALG6 246872 sc-eQTL 8.70e-01 -0.0158 0.0964 0.612 CD8_TEM L2
ENSG00000116641 DOCK7 926061 sc-eQTL 7.69e-01 0.0275 0.0934 0.612 CD8_TEM L2
ENSG00000125703 ATG4C 830315 sc-eQTL 7.71e-01 0.0262 0.0898 0.612 CD8_TEM L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 2.38e-01 -0.115 0.0969 0.612 CD8_TEM L2
ENSG00000158966 CACHD1 -855682 sc-eQTL 8.05e-02 -0.0345 0.0197 0.612 CD8_TEM L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 1.95e-01 -0.122 0.0939 0.612 CD8_TEM L2
ENSG00000079739 PGM1 21036 sc-eQTL 8.53e-01 0.0172 0.0925 0.617 MAIT L2
ENSG00000088035 ALG6 246872 sc-eQTL 7.13e-01 -0.0337 0.0915 0.617 MAIT L2
ENSG00000116641 DOCK7 926061 sc-eQTL 9.15e-02 0.148 0.0871 0.617 MAIT L2
ENSG00000125703 ATG4C 830315 sc-eQTL 5.28e-01 0.0584 0.0924 0.617 MAIT L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 5.31e-01 -0.0581 0.0926 0.617 MAIT L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 8.03e-01 -0.0239 0.0954 0.617 MAIT L2
ENSG00000079739 PGM1 21036 sc-eQTL 1.55e-01 0.129 0.0904 0.616 NK_CD56bright L2
ENSG00000088035 ALG6 246872 sc-eQTL 6.99e-01 0.0361 0.0931 0.616 NK_CD56bright L2
ENSG00000116641 DOCK7 926061 sc-eQTL 6.72e-01 0.0342 0.0807 0.616 NK_CD56bright L2
ENSG00000125703 ATG4C 830315 sc-eQTL 1.41e-01 0.133 0.0897 0.616 NK_CD56bright L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 9.37e-01 -0.00748 0.0939 0.616 NK_CD56bright L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 2.38e-01 -0.109 0.0923 0.616 NK_CD56bright L2
ENSG00000079739 PGM1 21036 sc-eQTL 2.89e-01 0.0765 0.072 0.621 NK_CD56dim L2
ENSG00000088035 ALG6 246872 sc-eQTL 8.84e-01 0.0134 0.0916 0.621 NK_CD56dim L2
ENSG00000116641 DOCK7 926061 sc-eQTL 4.53e-01 -0.0599 0.0796 0.621 NK_CD56dim L2
ENSG00000125703 ATG4C 830315 sc-eQTL 2.35e-01 -0.0961 0.0807 0.621 NK_CD56dim L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 6.11e-02 -0.172 0.0914 0.621 NK_CD56dim L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 2.31e-03 -0.3 0.0974 0.621 NK_CD56dim L2
ENSG00000079739 PGM1 21036 sc-eQTL 3.97e-01 0.0852 0.1 0.612 NK_HLA L2
ENSG00000088035 ALG6 246872 sc-eQTL 1.30e-01 0.157 0.104 0.612 NK_HLA L2
ENSG00000116641 DOCK7 926061 sc-eQTL 7.31e-01 -0.0275 0.0797 0.612 NK_HLA L2
ENSG00000125703 ATG4C 830315 sc-eQTL 2.99e-01 -0.0962 0.0924 0.612 NK_HLA L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 1.11e-01 -0.155 0.0967 0.612 NK_HLA L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 2.84e-01 0.0992 0.0924 0.612 NK_HLA L2
ENSG00000079739 PGM1 21036 sc-eQTL 3.62e-01 0.0723 0.0792 0.621 NK_cytokine L2
ENSG00000088035 ALG6 246872 sc-eQTL 1.31e-01 0.135 0.0892 0.621 NK_cytokine L2
ENSG00000116641 DOCK7 926061 sc-eQTL 8.24e-01 0.0185 0.0831 0.621 NK_cytokine L2
ENSG00000125703 ATG4C 830315 sc-eQTL 4.64e-02 0.169 0.0842 0.621 NK_cytokine L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 7.82e-01 -0.0244 0.088 0.621 NK_cytokine L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 2.26e-01 -0.113 0.0935 0.621 NK_cytokine L2
ENSG00000079739 PGM1 21036 sc-eQTL 3.30e-01 0.108 0.11 0.619 PB L2
ENSG00000088035 ALG6 246872 sc-eQTL 6.37e-01 0.055 0.116 0.619 PB L2
ENSG00000116641 DOCK7 926061 sc-eQTL 8.99e-02 -0.21 0.123 0.619 PB L2
ENSG00000125703 ATG4C 830315 sc-eQTL 4.95e-01 0.0742 0.108 0.619 PB L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 2.29e-02 -0.244 0.106 0.619 PB L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 5.50e-02 0.227 0.117 0.619 PB L2
ENSG00000079739 PGM1 21036 sc-eQTL 7.00e-01 -0.0334 0.0866 0.617 Pro_T L2
ENSG00000088035 ALG6 246872 sc-eQTL 1.53e-01 -0.126 0.0877 0.617 Pro_T L2
ENSG00000116641 DOCK7 926061 sc-eQTL 7.46e-01 0.0287 0.0884 0.617 Pro_T L2
ENSG00000125703 ATG4C 830315 sc-eQTL 2.16e-01 0.0958 0.0771 0.617 Pro_T L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 6.84e-01 -0.0316 0.0776 0.617 Pro_T L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 7.13e-01 -0.0332 0.0902 0.617 Pro_T L2
ENSG00000079739 PGM1 21036 sc-eQTL 8.47e-01 0.0172 0.0894 0.62 Treg L2
ENSG00000088035 ALG6 246872 sc-eQTL 2.92e-01 0.101 0.0953 0.62 Treg L2
ENSG00000116641 DOCK7 926061 sc-eQTL 9.48e-01 0.00571 0.0877 0.62 Treg L2
ENSG00000125703 ATG4C 830315 sc-eQTL 7.66e-01 0.0267 0.0896 0.62 Treg L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 4.25e-01 0.0748 0.0936 0.62 Treg L2
ENSG00000158966 CACHD1 -855682 sc-eQTL 9.15e-01 -0.00753 0.0709 0.62 Treg L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 9.00e-01 -0.0113 0.0897 0.62 Treg L2
ENSG00000079739 PGM1 21036 sc-eQTL 8.16e-01 -0.0211 0.0908 0.598 cDC L2
ENSG00000088035 ALG6 246872 sc-eQTL 2.11e-01 -0.115 0.0917 0.598 cDC L2
ENSG00000116641 DOCK7 926061 sc-eQTL 1.88e-01 0.119 0.09 0.598 cDC L2
ENSG00000125703 ATG4C 830315 sc-eQTL 3.48e-02 0.165 0.0776 0.598 cDC L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 4.67e-03 0.279 0.0973 0.598 cDC L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 6.66e-01 0.0346 0.0799 0.598 cDC L2
ENSG00000079739 PGM1 21036 sc-eQTL 6.46e-01 -0.0385 0.0837 0.62 cMono_IL1B L2
ENSG00000088035 ALG6 246872 sc-eQTL 2.96e-01 -0.0875 0.0836 0.62 cMono_IL1B L2
ENSG00000116641 DOCK7 926061 sc-eQTL 7.71e-02 -0.156 0.0877 0.62 cMono_IL1B L2
ENSG00000125703 ATG4C 830315 sc-eQTL 9.66e-01 0.00267 0.0621 0.62 cMono_IL1B L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 4.68e-01 -0.0638 0.0879 0.62 cMono_IL1B L2
ENSG00000079739 PGM1 21036 sc-eQTL 8.22e-01 -0.0212 0.0938 0.62 cMono_S100A L2
ENSG00000088035 ALG6 246872 sc-eQTL 8.38e-01 -0.0195 0.0951 0.62 cMono_S100A L2
ENSG00000116641 DOCK7 926061 sc-eQTL 6.31e-01 -0.0423 0.0881 0.62 cMono_S100A L2
ENSG00000125703 ATG4C 830315 sc-eQTL 3.94e-01 0.0651 0.0762 0.62 cMono_S100A L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 5.37e-01 0.0532 0.086 0.62 cMono_S100A L2
ENSG00000079739 PGM1 21036 sc-eQTL 4.12e-01 0.0878 0.107 0.609 gdT L2
ENSG00000088035 ALG6 246872 sc-eQTL 8.23e-01 0.0255 0.114 0.609 gdT L2
ENSG00000116641 DOCK7 926061 sc-eQTL 2.71e-01 0.123 0.111 0.609 gdT L2
ENSG00000125703 ATG4C 830315 sc-eQTL 4.41e-01 -0.0823 0.107 0.609 gdT L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 7.01e-01 -0.0437 0.113 0.609 gdT L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 7.41e-01 0.0369 0.112 0.609 gdT L2
ENSG00000079739 PGM1 21036 sc-eQTL 5.67e-01 -0.054 0.0942 0.616 intMono L2
ENSG00000088035 ALG6 246872 sc-eQTL 3.53e-01 0.0815 0.0876 0.616 intMono L2
ENSG00000116641 DOCK7 926061 sc-eQTL 8.82e-01 -0.0133 0.0897 0.616 intMono L2
ENSG00000125703 ATG4C 830315 sc-eQTL 7.37e-01 -0.0287 0.0856 0.616 intMono L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 5.33e-01 -0.0588 0.0942 0.616 intMono L2
ENSG00000079739 PGM1 21036 sc-eQTL 4.51e-01 0.0674 0.0891 0.62 ncMono L2
ENSG00000088035 ALG6 246872 sc-eQTL 5.94e-01 -0.0523 0.098 0.62 ncMono L2
ENSG00000116641 DOCK7 926061 sc-eQTL 5.73e-01 -0.0545 0.0964 0.62 ncMono L2
ENSG00000125703 ATG4C 830315 sc-eQTL 9.34e-01 -0.00746 0.0901 0.62 ncMono L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 1.68e-01 -0.13 0.0938 0.62 ncMono L2
ENSG00000079739 PGM1 21036 sc-eQTL 7.94e-01 -0.0282 0.108 0.593 pDC L2
ENSG00000088035 ALG6 246872 sc-eQTL 4.72e-01 -0.0754 0.105 0.593 pDC L2
ENSG00000116641 DOCK7 926061 sc-eQTL 1.25e-01 -0.164 0.106 0.593 pDC L2
ENSG00000125703 ATG4C 830315 sc-eQTL 3.15e-01 -0.0967 0.0958 0.593 pDC L2
ENSG00000142856 ITGB3BP 20726 sc-eQTL 9.83e-01 -0.00225 0.108 0.593 pDC L2
ENSG00000203965 EFCAB7 91075 sc-eQTL 7.95e-01 0.0248 0.0955 0.593 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 21036 sc-eQTL 1.21e-01 0.134 0.0864 0.62 B_Memory LOneK1K
ENSG00000088035 ALG6 246872 sc-eQTL 3.93e-01 -0.0822 0.0959 0.62 B_Memory LOneK1K
ENSG00000116641 DOCK7 926061 sc-eQTL 4.72e-01 0.06 0.0833 0.62 B_Memory LOneK1K
ENSG00000125703 ATG4C 830315 sc-eQTL 8.43e-01 0.0133 0.0674 0.62 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 20726 sc-eQTL 3.91e-01 -0.076 0.0885 0.62 B_Memory LOneK1K
ENSG00000203965 EFCAB7 91075 sc-eQTL 5.62e-02 -0.176 0.0915 0.62 B_Memory LOneK1K
ENSG00000079739 PGM1 21036 sc-eQTL 8.38e-04 0.301 0.0887 0.62 B_Naive LOneK1K
ENSG00000088035 ALG6 246872 sc-eQTL 4.58e-01 -0.0697 0.0937 0.62 B_Naive LOneK1K
ENSG00000116641 DOCK7 926061 sc-eQTL 3.16e-01 -0.0878 0.0874 0.62 B_Naive LOneK1K
ENSG00000125703 ATG4C 830315 sc-eQTL 9.75e-01 0.00212 0.0668 0.62 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 20726 sc-eQTL 9.63e-01 0.00435 0.0945 0.62 B_Naive LOneK1K
ENSG00000203965 EFCAB7 91075 sc-eQTL 2.18e-01 -0.117 0.0947 0.62 B_Naive LOneK1K
ENSG00000079739 PGM1 21036 sc-eQTL 6.35e-01 -0.0407 0.0856 0.62 CD14_Mono LOneK1K
ENSG00000088035 ALG6 246872 sc-eQTL 2.57e-01 -0.0939 0.0827 0.62 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 926061 sc-eQTL 1.18e-01 -0.13 0.0831 0.62 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 830315 sc-eQTL 6.49e-01 0.0263 0.0577 0.62 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 20726 sc-eQTL 9.27e-01 0.00785 0.0854 0.62 CD14_Mono LOneK1K
ENSG00000079739 PGM1 21036 sc-eQTL 6.13e-01 -0.0424 0.0835 0.619 CD16_Mono LOneK1K
ENSG00000088035 ALG6 246872 sc-eQTL 5.77e-01 0.0529 0.0948 0.619 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 926061 sc-eQTL 2.44e-01 -0.109 0.0936 0.619 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 830315 sc-eQTL 8.41e-01 -0.016 0.08 0.619 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 20726 sc-eQTL 1.53e-01 -0.133 0.0925 0.619 CD16_Mono LOneK1K
ENSG00000079739 PGM1 21036 sc-eQTL 1.05e-01 0.116 0.071 0.621 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 246872 sc-eQTL 1.74e-01 0.116 0.0854 0.621 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 926061 sc-eQTL 8.40e-01 -0.0155 0.0768 0.621 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 830315 sc-eQTL 9.29e-01 0.00683 0.0767 0.621 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 20726 sc-eQTL 3.60e-02 -0.19 0.0899 0.621 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 91075 sc-eQTL 3.07e-02 -0.216 0.0993 0.621 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 21036 eQTL 2.31e-07 0.0934 0.0179 0.0 0.0 0.359
ENSG00000142856 ITGB3BP 20726 eQTL 6.68e-10 0.182 0.0292 0.0 0.0 0.359

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 21036 1.8e-05 2.24e-05 3.73e-06 1.2e-05 3.33e-06 8.4e-06 2.73e-05 3.51e-06 1.87e-05 9.43e-06 2.55e-05 9.41e-06 3.48e-05 9.13e-06 5.24e-06 1.14e-05 1.04e-05 1.64e-05 5.45e-06 4.88e-06 9.16e-06 2.08e-05 1.98e-05 5.75e-06 3.02e-05 5.48e-06 8.23e-06 8.71e-06 2.1e-05 1.78e-05 1.29e-05 1.38e-06 1.89e-06 4.95e-06 7.8e-06 4.37e-06 2.34e-06 2.73e-06 3.46e-06 2.44e-06 1.5e-06 2.73e-05 2.66e-06 2.64e-07 1.93e-06 2.74e-06 2.95e-06 1.34e-06 1.1e-06
ENSG00000142856 ITGB3BP 20726 1.83e-05 2.26e-05 3.79e-06 1.2e-05 3.32e-06 8.49e-06 2.75e-05 3.5e-06 1.9e-05 9.54e-06 2.58e-05 9.59e-06 3.51e-05 9.2e-06 5.26e-06 1.14e-05 1.05e-05 1.68e-05 5.56e-06 4.89e-06 9.45e-06 2.09e-05 2e-05 5.74e-06 3.04e-05 5.53e-06 8.33e-06 8.92e-06 2.12e-05 1.81e-05 1.29e-05 1.4e-06 1.91e-06 5.08e-06 7.96e-06 4.46e-06 2.36e-06 2.77e-06 3.48e-06 2.49e-06 1.48e-06 2.75e-05 2.64e-06 2.71e-07 1.93e-06 2.68e-06 3e-06 1.35e-06 1.11e-06