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Genes within 1Mb (chr1:63608409:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 14998 sc-eQTL 2.55e-02 -0.221 0.0985 0.835 B L1
ENSG00000088035 ALG6 240834 sc-eQTL 5.65e-01 0.0595 0.103 0.835 B L1
ENSG00000116641 DOCK7 920023 sc-eQTL 9.97e-01 -0.000369 0.103 0.835 B L1
ENSG00000125703 ATG4C 824277 sc-eQTL 7.10e-01 -0.0267 0.0717 0.835 B L1
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.12e-22 -1.0 0.0909 0.835 B L1
ENSG00000203965 EFCAB7 85037 sc-eQTL 2.14e-06 -0.541 0.111 0.835 B L1
ENSG00000079739 PGM1 14998 sc-eQTL 3.60e-01 -0.079 0.086 0.835 CD4T L1
ENSG00000088035 ALG6 240834 sc-eQTL 1.07e-01 0.153 0.0945 0.835 CD4T L1
ENSG00000116641 DOCK7 920023 sc-eQTL 6.40e-01 -0.0451 0.0962 0.835 CD4T L1
ENSG00000125703 ATG4C 824277 sc-eQTL 7.28e-01 -0.027 0.0777 0.835 CD4T L1
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.89e-29 -1.08 0.0816 0.835 CD4T L1
ENSG00000158966 CACHD1 -861720 sc-eQTL 9.07e-01 -0.00768 0.0658 0.835 CD4T L1
ENSG00000203965 EFCAB7 85037 sc-eQTL 1.37e-04 -0.372 0.0957 0.835 CD4T L1
ENSG00000079739 PGM1 14998 sc-eQTL 1.53e-01 -0.133 0.0929 0.835 CD8T L1
ENSG00000088035 ALG6 240834 sc-eQTL 5.94e-01 -0.0549 0.103 0.835 CD8T L1
ENSG00000116641 DOCK7 920023 sc-eQTL 4.08e-01 0.0863 0.104 0.835 CD8T L1
ENSG00000125703 ATG4C 824277 sc-eQTL 3.62e-01 0.0904 0.0988 0.835 CD8T L1
ENSG00000142856 ITGB3BP 14688 sc-eQTL 8.35e-21 -0.938 0.09 0.835 CD8T L1
ENSG00000158966 CACHD1 -861720 sc-eQTL 6.29e-01 0.0271 0.056 0.835 CD8T L1
ENSG00000203965 EFCAB7 85037 sc-eQTL 4.09e-05 -0.445 0.106 0.835 CD8T L1
ENSG00000079739 PGM1 14998 sc-eQTL 7.11e-01 -0.0393 0.106 0.831 DC L1
ENSG00000088035 ALG6 240834 sc-eQTL 3.04e-01 0.112 0.109 0.831 DC L1
ENSG00000116641 DOCK7 920023 sc-eQTL 8.24e-01 0.0249 0.112 0.831 DC L1
ENSG00000125703 ATG4C 824277 sc-eQTL 8.45e-01 -0.0171 0.0876 0.831 DC L1
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.08e-03 -0.396 0.119 0.831 DC L1
ENSG00000203965 EFCAB7 85037 sc-eQTL 2.07e-02 -0.245 0.105 0.831 DC L1
ENSG00000079739 PGM1 14998 sc-eQTL 5.61e-01 -0.0593 0.102 0.835 Mono L1
ENSG00000088035 ALG6 240834 sc-eQTL 5.39e-03 0.294 0.105 0.835 Mono L1
ENSG00000116641 DOCK7 920023 sc-eQTL 1.54e-01 -0.147 0.103 0.835 Mono L1
ENSG00000125703 ATG4C 824277 sc-eQTL 7.18e-01 0.0252 0.0696 0.835 Mono L1
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.88e-11 -0.702 0.0989 0.835 Mono L1
ENSG00000079739 PGM1 14998 sc-eQTL 1.37e-01 0.128 0.0861 0.835 NK L1
ENSG00000088035 ALG6 240834 sc-eQTL 3.33e-01 0.0984 0.101 0.835 NK L1
ENSG00000116641 DOCK7 920023 sc-eQTL 4.34e-01 -0.0654 0.0835 0.835 NK L1
ENSG00000125703 ATG4C 824277 sc-eQTL 1.82e-01 -0.12 0.0894 0.835 NK L1
ENSG00000142856 ITGB3BP 14688 sc-eQTL 6.64e-10 -0.66 0.102 0.835 NK L1
ENSG00000203965 EFCAB7 85037 sc-eQTL 3.09e-01 -0.123 0.121 0.835 NK L1
ENSG00000079739 PGM1 14998 sc-eQTL 6.69e-01 -0.0423 0.0988 0.835 Other_T L1
ENSG00000088035 ALG6 240834 sc-eQTL 9.01e-01 0.0123 0.0993 0.835 Other_T L1
ENSG00000116641 DOCK7 920023 sc-eQTL 7.89e-01 0.0272 0.101 0.835 Other_T L1
ENSG00000125703 ATG4C 824277 sc-eQTL 1.62e-02 0.21 0.0866 0.835 Other_T L1
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.55e-01 -0.111 0.0775 0.835 Other_T L1
ENSG00000203965 EFCAB7 85037 sc-eQTL 2.16e-01 -0.148 0.12 0.835 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 14998 sc-eQTL 9.17e-01 0.0138 0.133 0.849 B_Activated L2
ENSG00000088035 ALG6 240834 sc-eQTL 9.61e-01 0.00628 0.127 0.849 B_Activated L2
ENSG00000116641 DOCK7 920023 sc-eQTL 4.85e-01 0.0829 0.118 0.849 B_Activated L2
ENSG00000125703 ATG4C 824277 sc-eQTL 6.57e-01 0.0554 0.125 0.849 B_Activated L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 2.88e-03 -0.359 0.119 0.849 B_Activated L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 5.54e-01 -0.0683 0.115 0.849 B_Activated L2
ENSG00000079739 PGM1 14998 sc-eQTL 4.75e-01 -0.0844 0.118 0.835 B_Intermediate L2
ENSG00000088035 ALG6 240834 sc-eQTL 5.97e-01 -0.0635 0.12 0.835 B_Intermediate L2
ENSG00000116641 DOCK7 920023 sc-eQTL 8.15e-01 -0.0268 0.115 0.835 B_Intermediate L2
ENSG00000125703 ATG4C 824277 sc-eQTL 6.99e-01 0.0375 0.0969 0.835 B_Intermediate L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.23e-05 -0.494 0.11 0.835 B_Intermediate L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 5.04e-04 -0.393 0.111 0.835 B_Intermediate L2
ENSG00000079739 PGM1 14998 sc-eQTL 2.68e-01 -0.129 0.116 0.834 B_Memory L2
ENSG00000088035 ALG6 240834 sc-eQTL 4.04e-01 0.0986 0.118 0.834 B_Memory L2
ENSG00000116641 DOCK7 920023 sc-eQTL 1.34e-01 -0.166 0.11 0.834 B_Memory L2
ENSG00000125703 ATG4C 824277 sc-eQTL 9.10e-01 0.0119 0.105 0.834 B_Memory L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 3.03e-04 -0.43 0.117 0.834 B_Memory L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 2.11e-02 -0.275 0.118 0.834 B_Memory L2
ENSG00000079739 PGM1 14998 sc-eQTL 1.83e-01 -0.157 0.118 0.835 B_Naive1 L2
ENSG00000088035 ALG6 240834 sc-eQTL 8.74e-01 0.0189 0.119 0.835 B_Naive1 L2
ENSG00000116641 DOCK7 920023 sc-eQTL 2.68e-01 0.126 0.113 0.835 B_Naive1 L2
ENSG00000125703 ATG4C 824277 sc-eQTL 9.52e-01 -0.00525 0.0876 0.835 B_Naive1 L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 2.60e-17 -0.907 0.0981 0.835 B_Naive1 L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 1.00e-04 -0.474 0.12 0.835 B_Naive1 L2
ENSG00000079739 PGM1 14998 sc-eQTL 7.91e-03 -0.307 0.115 0.835 B_Naive2 L2
ENSG00000088035 ALG6 240834 sc-eQTL 9.43e-01 0.0087 0.122 0.835 B_Naive2 L2
ENSG00000116641 DOCK7 920023 sc-eQTL 6.79e-01 0.0484 0.117 0.835 B_Naive2 L2
ENSG00000125703 ATG4C 824277 sc-eQTL 7.62e-01 0.0342 0.113 0.835 B_Naive2 L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 3.21e-11 -0.77 0.11 0.835 B_Naive2 L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 8.41e-01 0.0244 0.121 0.835 B_Naive2 L2
ENSG00000079739 PGM1 14998 sc-eQTL 6.72e-01 -0.0506 0.119 0.834 CD4_CTL L2
ENSG00000088035 ALG6 240834 sc-eQTL 3.05e-01 -0.129 0.126 0.834 CD4_CTL L2
ENSG00000116641 DOCK7 920023 sc-eQTL 3.89e-01 0.095 0.11 0.834 CD4_CTL L2
ENSG00000125703 ATG4C 824277 sc-eQTL 2.75e-01 0.124 0.114 0.834 CD4_CTL L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 9.39e-02 -0.204 0.121 0.834 CD4_CTL L2
ENSG00000158966 CACHD1 -861720 sc-eQTL 8.39e-01 0.00904 0.0443 0.834 CD4_CTL L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 9.30e-01 0.0101 0.116 0.834 CD4_CTL L2
ENSG00000079739 PGM1 14998 sc-eQTL 3.45e-01 -0.091 0.0961 0.835 CD4_Naive L2
ENSG00000088035 ALG6 240834 sc-eQTL 2.78e-02 0.229 0.103 0.835 CD4_Naive L2
ENSG00000116641 DOCK7 920023 sc-eQTL 9.22e-01 -0.01 0.103 0.835 CD4_Naive L2
ENSG00000125703 ATG4C 824277 sc-eQTL 4.76e-01 -0.0649 0.0908 0.835 CD4_Naive L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 6.47e-21 -0.943 0.0901 0.835 CD4_Naive L2
ENSG00000158966 CACHD1 -861720 sc-eQTL 7.42e-01 -0.0217 0.0658 0.835 CD4_Naive L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 7.30e-03 -0.294 0.108 0.835 CD4_Naive L2
ENSG00000079739 PGM1 14998 sc-eQTL 3.23e-01 -0.0982 0.0992 0.835 CD4_TCM L2
ENSG00000088035 ALG6 240834 sc-eQTL 5.13e-01 -0.0756 0.115 0.835 CD4_TCM L2
ENSG00000116641 DOCK7 920023 sc-eQTL 3.83e-01 -0.0893 0.102 0.835 CD4_TCM L2
ENSG00000125703 ATG4C 824277 sc-eQTL 8.25e-02 -0.172 0.0989 0.835 CD4_TCM L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 2.32e-16 -0.892 0.1 0.835 CD4_TCM L2
ENSG00000158966 CACHD1 -861720 sc-eQTL 2.07e-01 0.117 0.0927 0.835 CD4_TCM L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 8.77e-04 -0.373 0.111 0.835 CD4_TCM L2
ENSG00000079739 PGM1 14998 sc-eQTL 8.27e-01 0.0254 0.116 0.835 CD4_TEM L2
ENSG00000088035 ALG6 240834 sc-eQTL 2.20e-01 0.143 0.116 0.835 CD4_TEM L2
ENSG00000116641 DOCK7 920023 sc-eQTL 9.37e-01 -0.00906 0.114 0.835 CD4_TEM L2
ENSG00000125703 ATG4C 824277 sc-eQTL 1.40e-01 0.163 0.11 0.835 CD4_TEM L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 4.02e-05 -0.46 0.11 0.835 CD4_TEM L2
ENSG00000158966 CACHD1 -861720 sc-eQTL 2.49e-01 -0.0814 0.0704 0.835 CD4_TEM L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 5.35e-01 -0.0734 0.118 0.835 CD4_TEM L2
ENSG00000079739 PGM1 14998 sc-eQTL 6.97e-01 -0.0419 0.107 0.835 CD8_CTL L2
ENSG00000088035 ALG6 240834 sc-eQTL 4.19e-01 0.0923 0.114 0.835 CD8_CTL L2
ENSG00000116641 DOCK7 920023 sc-eQTL 6.52e-01 0.049 0.108 0.835 CD8_CTL L2
ENSG00000125703 ATG4C 824277 sc-eQTL 9.30e-01 -0.0102 0.115 0.835 CD8_CTL L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 6.51e-07 -0.58 0.113 0.835 CD8_CTL L2
ENSG00000158966 CACHD1 -861720 sc-eQTL 2.66e-01 0.0565 0.0507 0.835 CD8_CTL L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 2.38e-01 -0.145 0.122 0.835 CD8_CTL L2
ENSG00000079739 PGM1 14998 sc-eQTL 4.91e-01 -0.0742 0.108 0.835 CD8_Naive L2
ENSG00000088035 ALG6 240834 sc-eQTL 1.99e-01 -0.143 0.111 0.835 CD8_Naive L2
ENSG00000116641 DOCK7 920023 sc-eQTL 3.50e-01 0.108 0.115 0.835 CD8_Naive L2
ENSG00000125703 ATG4C 824277 sc-eQTL 6.61e-01 -0.0485 0.111 0.835 CD8_Naive L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 6.85e-15 -0.814 0.097 0.835 CD8_Naive L2
ENSG00000158966 CACHD1 -861720 sc-eQTL 7.81e-01 0.0216 0.0776 0.835 CD8_Naive L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 1.69e-03 -0.328 0.103 0.835 CD8_Naive L2
ENSG00000079739 PGM1 14998 sc-eQTL 7.91e-01 0.031 0.117 0.838 CD8_TCM L2
ENSG00000088035 ALG6 240834 sc-eQTL 3.57e-01 -0.109 0.118 0.838 CD8_TCM L2
ENSG00000116641 DOCK7 920023 sc-eQTL 6.49e-01 -0.0526 0.115 0.838 CD8_TCM L2
ENSG00000125703 ATG4C 824277 sc-eQTL 3.85e-01 -0.102 0.118 0.838 CD8_TCM L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.67e-05 -0.482 0.109 0.838 CD8_TCM L2
ENSG00000158966 CACHD1 -861720 sc-eQTL 9.35e-01 0.00488 0.0602 0.838 CD8_TCM L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 3.07e-01 -0.119 0.116 0.838 CD8_TCM L2
ENSG00000079739 PGM1 14998 sc-eQTL 1.58e-01 -0.168 0.118 0.829 CD8_TEM L2
ENSG00000088035 ALG6 240834 sc-eQTL 9.93e-01 0.000974 0.119 0.829 CD8_TEM L2
ENSG00000116641 DOCK7 920023 sc-eQTL 4.07e-01 0.0959 0.116 0.829 CD8_TEM L2
ENSG00000125703 ATG4C 824277 sc-eQTL 1.06e-02 0.282 0.109 0.829 CD8_TEM L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.31e-02 -0.297 0.119 0.829 CD8_TEM L2
ENSG00000158966 CACHD1 -861720 sc-eQTL 8.81e-01 -0.00367 0.0245 0.829 CD8_TEM L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 2.32e-01 -0.139 0.116 0.829 CD8_TEM L2
ENSG00000079739 PGM1 14998 sc-eQTL 8.99e-01 -0.0145 0.114 0.833 MAIT L2
ENSG00000088035 ALG6 240834 sc-eQTL 6.47e-01 -0.0517 0.113 0.833 MAIT L2
ENSG00000116641 DOCK7 920023 sc-eQTL 4.20e-01 0.0872 0.108 0.833 MAIT L2
ENSG00000125703 ATG4C 824277 sc-eQTL 4.05e-02 0.233 0.113 0.833 MAIT L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.10e-05 -0.491 0.109 0.833 MAIT L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 4.24e-01 -0.0942 0.117 0.833 MAIT L2
ENSG00000079739 PGM1 14998 sc-eQTL 4.16e-01 0.0937 0.115 0.838 NK_CD56bright L2
ENSG00000088035 ALG6 240834 sc-eQTL 3.15e-01 0.119 0.118 0.838 NK_CD56bright L2
ENSG00000116641 DOCK7 920023 sc-eQTL 8.34e-01 0.0215 0.102 0.838 NK_CD56bright L2
ENSG00000125703 ATG4C 824277 sc-eQTL 6.26e-01 -0.0557 0.114 0.838 NK_CD56bright L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 4.29e-03 -0.337 0.117 0.838 NK_CD56bright L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 4.48e-01 -0.0891 0.117 0.838 NK_CD56bright L2
ENSG00000079739 PGM1 14998 sc-eQTL 1.17e-01 0.141 0.0894 0.836 NK_CD56dim L2
ENSG00000088035 ALG6 240834 sc-eQTL 8.53e-01 -0.0211 0.114 0.836 NK_CD56dim L2
ENSG00000116641 DOCK7 920023 sc-eQTL 1.53e-01 -0.142 0.0988 0.836 NK_CD56dim L2
ENSG00000125703 ATG4C 824277 sc-eQTL 1.09e-02 -0.255 0.0992 0.836 NK_CD56dim L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.12e-04 -0.436 0.111 0.836 NK_CD56dim L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 9.90e-01 -0.00153 0.124 0.836 NK_CD56dim L2
ENSG00000079739 PGM1 14998 sc-eQTL 6.46e-02 -0.226 0.122 0.842 NK_HLA L2
ENSG00000088035 ALG6 240834 sc-eQTL 3.71e-01 0.114 0.127 0.842 NK_HLA L2
ENSG00000116641 DOCK7 920023 sc-eQTL 4.21e-01 0.0784 0.0972 0.842 NK_HLA L2
ENSG00000125703 ATG4C 824277 sc-eQTL 4.33e-01 0.0887 0.113 0.842 NK_HLA L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.78e-02 -0.28 0.117 0.842 NK_HLA L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 7.58e-01 0.035 0.113 0.842 NK_HLA L2
ENSG00000079739 PGM1 14998 sc-eQTL 1.41e-01 0.146 0.0986 0.836 NK_cytokine L2
ENSG00000088035 ALG6 240834 sc-eQTL 3.00e-01 0.116 0.112 0.836 NK_cytokine L2
ENSG00000116641 DOCK7 920023 sc-eQTL 9.33e-01 -0.0087 0.104 0.836 NK_cytokine L2
ENSG00000125703 ATG4C 824277 sc-eQTL 7.28e-01 0.0369 0.106 0.836 NK_cytokine L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 9.40e-07 -0.525 0.104 0.836 NK_cytokine L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 6.08e-01 -0.0601 0.117 0.836 NK_cytokine L2
ENSG00000079739 PGM1 14998 sc-eQTL 5.53e-02 -0.29 0.15 0.844 PB L2
ENSG00000088035 ALG6 240834 sc-eQTL 1.57e-01 0.226 0.158 0.844 PB L2
ENSG00000116641 DOCK7 920023 sc-eQTL 8.50e-01 -0.0323 0.171 0.844 PB L2
ENSG00000125703 ATG4C 824277 sc-eQTL 8.19e-01 0.0342 0.149 0.844 PB L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 4.06e-02 -0.302 0.146 0.844 PB L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 2.04e-01 -0.207 0.162 0.844 PB L2
ENSG00000079739 PGM1 14998 sc-eQTL 6.68e-01 -0.0457 0.107 0.837 Pro_T L2
ENSG00000088035 ALG6 240834 sc-eQTL 9.97e-01 -0.000358 0.109 0.837 Pro_T L2
ENSG00000116641 DOCK7 920023 sc-eQTL 1.67e-02 -0.259 0.107 0.837 Pro_T L2
ENSG00000125703 ATG4C 824277 sc-eQTL 2.91e-01 -0.101 0.0951 0.837 Pro_T L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 3.05e-06 0.435 0.0907 0.837 Pro_T L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 4.18e-01 0.0899 0.111 0.837 Pro_T L2
ENSG00000079739 PGM1 14998 sc-eQTL 5.62e-01 -0.0654 0.113 0.835 Treg L2
ENSG00000088035 ALG6 240834 sc-eQTL 6.74e-01 0.0507 0.12 0.835 Treg L2
ENSG00000116641 DOCK7 920023 sc-eQTL 9.71e-01 0.00398 0.111 0.835 Treg L2
ENSG00000125703 ATG4C 824277 sc-eQTL 1.80e-01 0.151 0.112 0.835 Treg L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 4.78e-03 -0.331 0.116 0.835 Treg L2
ENSG00000158966 CACHD1 -861720 sc-eQTL 1.75e-02 -0.211 0.0881 0.835 Treg L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 8.45e-01 -0.0221 0.113 0.835 Treg L2
ENSG00000079739 PGM1 14998 sc-eQTL 3.73e-01 -0.101 0.113 0.832 cDC L2
ENSG00000088035 ALG6 240834 sc-eQTL 5.20e-01 0.0741 0.115 0.832 cDC L2
ENSG00000116641 DOCK7 920023 sc-eQTL 3.93e-01 0.0966 0.113 0.832 cDC L2
ENSG00000125703 ATG4C 824277 sc-eQTL 8.87e-01 0.0139 0.0981 0.832 cDC L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 8.40e-02 -0.214 0.123 0.832 cDC L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 3.58e-01 -0.0919 0.0997 0.832 cDC L2
ENSG00000079739 PGM1 14998 sc-eQTL 7.70e-01 -0.0311 0.106 0.835 cMono_IL1B L2
ENSG00000088035 ALG6 240834 sc-eQTL 3.92e-01 0.0909 0.106 0.835 cMono_IL1B L2
ENSG00000116641 DOCK7 920023 sc-eQTL 3.92e-01 -0.0959 0.112 0.835 cMono_IL1B L2
ENSG00000125703 ATG4C 824277 sc-eQTL 9.21e-01 -0.0078 0.0788 0.835 cMono_IL1B L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 2.50e-08 -0.6 0.104 0.835 cMono_IL1B L2
ENSG00000079739 PGM1 14998 sc-eQTL 5.63e-01 -0.0687 0.118 0.835 cMono_S100A L2
ENSG00000088035 ALG6 240834 sc-eQTL 4.00e-02 0.246 0.119 0.835 cMono_S100A L2
ENSG00000116641 DOCK7 920023 sc-eQTL 5.28e-01 -0.0704 0.111 0.835 cMono_S100A L2
ENSG00000125703 ATG4C 824277 sc-eQTL 3.22e-01 0.0956 0.0962 0.835 cMono_S100A L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.55e-03 -0.341 0.106 0.835 cMono_S100A L2
ENSG00000079739 PGM1 14998 sc-eQTL 4.48e-01 -0.099 0.13 0.842 gdT L2
ENSG00000088035 ALG6 240834 sc-eQTL 2.37e-01 -0.164 0.138 0.842 gdT L2
ENSG00000116641 DOCK7 920023 sc-eQTL 4.98e-01 0.0924 0.136 0.842 gdT L2
ENSG00000125703 ATG4C 824277 sc-eQTL 4.81e-01 -0.0918 0.13 0.842 gdT L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.01e-01 -0.226 0.137 0.842 gdT L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 6.44e-01 -0.0629 0.136 0.842 gdT L2
ENSG00000079739 PGM1 14998 sc-eQTL 5.49e-01 -0.071 0.118 0.836 intMono L2
ENSG00000088035 ALG6 240834 sc-eQTL 2.49e-01 0.127 0.11 0.836 intMono L2
ENSG00000116641 DOCK7 920023 sc-eQTL 4.98e-01 -0.0763 0.112 0.836 intMono L2
ENSG00000125703 ATG4C 824277 sc-eQTL 3.40e-01 0.102 0.107 0.836 intMono L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 3.03e-04 -0.421 0.115 0.836 intMono L2
ENSG00000079739 PGM1 14998 sc-eQTL 4.20e-01 -0.0862 0.107 0.837 ncMono L2
ENSG00000088035 ALG6 240834 sc-eQTL 1.34e-01 0.176 0.117 0.837 ncMono L2
ENSG00000116641 DOCK7 920023 sc-eQTL 2.16e-01 -0.143 0.115 0.837 ncMono L2
ENSG00000125703 ATG4C 824277 sc-eQTL 5.44e-01 -0.0655 0.108 0.837 ncMono L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 2.04e-02 -0.26 0.111 0.837 ncMono L2
ENSG00000079739 PGM1 14998 sc-eQTL 5.44e-01 -0.075 0.123 0.825 pDC L2
ENSG00000088035 ALG6 240834 sc-eQTL 5.41e-01 0.0735 0.12 0.825 pDC L2
ENSG00000116641 DOCK7 920023 sc-eQTL 9.57e-01 0.00669 0.123 0.825 pDC L2
ENSG00000125703 ATG4C 824277 sc-eQTL 9.01e-01 -0.0137 0.11 0.825 pDC L2
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.18e-02 -0.309 0.121 0.825 pDC L2
ENSG00000203965 EFCAB7 85037 sc-eQTL 6.04e-02 -0.205 0.108 0.825 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 14998 sc-eQTL 2.59e-01 -0.125 0.111 0.835 B_Memory LOneK1K
ENSG00000088035 ALG6 240834 sc-eQTL 7.43e-01 0.0402 0.123 0.835 B_Memory LOneK1K
ENSG00000116641 DOCK7 920023 sc-eQTL 8.05e-01 -0.0264 0.106 0.835 B_Memory LOneK1K
ENSG00000125703 ATG4C 824277 sc-eQTL 8.94e-01 0.0115 0.086 0.835 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.40e-09 -0.657 0.104 0.835 B_Memory LOneK1K
ENSG00000203965 EFCAB7 85037 sc-eQTL 1.50e-04 -0.44 0.114 0.835 B_Memory LOneK1K
ENSG00000079739 PGM1 14998 sc-eQTL 9.74e-03 -0.296 0.114 0.835 B_Naive LOneK1K
ENSG00000088035 ALG6 240834 sc-eQTL 7.43e-01 0.039 0.119 0.835 B_Naive LOneK1K
ENSG00000116641 DOCK7 920023 sc-eQTL 4.82e-01 0.078 0.111 0.835 B_Naive LOneK1K
ENSG00000125703 ATG4C 824277 sc-eQTL 7.89e-01 -0.0227 0.0846 0.835 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 14688 sc-eQTL 3.66e-21 -1.02 0.0968 0.835 B_Naive LOneK1K
ENSG00000203965 EFCAB7 85037 sc-eQTL 1.10e-03 -0.388 0.117 0.835 B_Naive LOneK1K
ENSG00000079739 PGM1 14998 sc-eQTL 8.10e-01 -0.0262 0.109 0.835 CD14_Mono LOneK1K
ENSG00000088035 ALG6 240834 sc-eQTL 6.03e-02 0.198 0.105 0.835 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 920023 sc-eQTL 2.07e-01 -0.134 0.106 0.835 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 824277 sc-eQTL 7.17e-01 0.0267 0.0735 0.835 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 14688 sc-eQTL 7.68e-09 -0.605 0.1 0.835 CD14_Mono LOneK1K
ENSG00000079739 PGM1 14998 sc-eQTL 2.96e-01 -0.108 0.103 0.834 CD16_Mono LOneK1K
ENSG00000088035 ALG6 240834 sc-eQTL 1.05e-02 0.299 0.116 0.834 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 920023 sc-eQTL 3.51e-01 -0.108 0.116 0.834 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 824277 sc-eQTL 5.77e-01 0.0553 0.099 0.834 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 14688 sc-eQTL 3.67e-04 -0.404 0.112 0.834 CD16_Mono LOneK1K
ENSG00000079739 PGM1 14998 sc-eQTL 2.24e-01 0.107 0.0875 0.836 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 240834 sc-eQTL 5.77e-01 0.0589 0.105 0.836 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 920023 sc-eQTL 4.82e-01 -0.0665 0.0944 0.836 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 824277 sc-eQTL 2.30e-01 -0.113 0.094 0.836 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 14688 sc-eQTL 1.57e-08 -0.609 0.104 0.836 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 85037 sc-eQTL 4.54e-01 -0.0925 0.123 0.836 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000088035 ALG6 240834 eQTL 1.12e-12 0.119 0.0165 0.0168 0.0523 0.191
ENSG00000142856 ITGB3BP 14688 eQTL 2.4900000000000002e-27 -0.394 0.0352 0.0 0.0 0.191
ENSG00000230798 FOXD3-AS1 283968 eQTL 0.00295 0.099 0.0332 0.00232 0.0021 0.191

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000088035 ALG6 240834 1.59e-06 2.42e-06 2.72e-07 1.63e-06 4.55e-07 7.12e-07 1.32e-06 3.83e-07 1.78e-06 7.31e-07 1.84e-06 1.29e-06 2.72e-06 5.86e-07 3.86e-07 1.1e-06 1.1e-06 1.34e-06 5.4e-07 5.52e-07 7.61e-07 1.95e-06 1.58e-06 6.51e-07 2.69e-06 9.13e-07 1.13e-06 9.59e-07 1.66e-06 1.59e-06 8.07e-07 2.49e-07 2.88e-07 6.21e-07 9.11e-07 4.57e-07 6.6e-07 3.63e-07 5.12e-07 1.88e-07 2.81e-07 2.7e-06 3.68e-07 1.81e-07 3.13e-07 2.46e-07 2.79e-07 1.43e-07 1.85e-07
ENSG00000142856 ITGB3BP 14688 2.59e-05 2.65e-05 5.15e-06 1.47e-05 4.7e-06 1.28e-05 3.74e-05 3.73e-06 2.55e-05 1.27e-05 3.05e-05 1.42e-05 4.02e-05 1.23e-05 6.11e-06 1.63e-05 1.24e-05 2.19e-05 6.6e-06 5.4e-06 1.18e-05 2.57e-05 2.57e-05 7.95e-06 3.83e-05 6.51e-06 1.06e-05 1.11e-05 2.76e-05 2.06e-05 1.51e-05 1.63e-06 2.39e-06 6.48e-06 1.04e-05 5.31e-06 2.93e-06 2.96e-06 4.29e-06 3.35e-06 1.72e-06 3.18e-05 2.93e-06 3.43e-07 2.21e-06 3.32e-06 3.75e-06 1.55e-06 1.52e-06
ENSG00000230798 FOXD3-AS1 283968 1.28e-06 1.3e-06 2.13e-07 1.29e-06 3.36e-07 6.17e-07 1.49e-06 3.68e-07 1.47e-06 5.99e-07 2.04e-06 7.63e-07 2.5e-06 2.86e-07 5.65e-07 9.45e-07 9.41e-07 9.52e-07 7.81e-07 6.21e-07 6.56e-07 1.82e-06 8.95e-07 5.74e-07 2.45e-06 6.17e-07 1.03e-06 7.45e-07 1.61e-06 1.16e-06 7.05e-07 2.57e-07 2.13e-07 6.58e-07 5.67e-07 4.66e-07 6.89e-07 2.23e-07 4.67e-07 2.42e-07 2.78e-07 1.77e-06 1.38e-07 1.81e-07 2.11e-07 1.37e-07 2.17e-07 3.68e-08 1.07e-07