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Genes within 1Mb (chr1:63593973:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 562 sc-eQTL 1.80e-02 -0.227 0.0953 0.814 B L1
ENSG00000088035 ALG6 226398 sc-eQTL 4.65e-01 0.0731 0.0999 0.814 B L1
ENSG00000116641 DOCK7 905587 sc-eQTL 8.94e-01 -0.0133 0.1 0.814 B L1
ENSG00000125703 ATG4C 809841 sc-eQTL 6.46e-01 -0.0319 0.0695 0.814 B L1
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.53e-29 -1.08 0.0818 0.814 B L1
ENSG00000203965 EFCAB7 70601 sc-eQTL 2.23e-07 -0.569 0.106 0.814 B L1
ENSG00000079739 PGM1 562 sc-eQTL 4.24e-01 -0.0669 0.0835 0.814 CD4T L1
ENSG00000088035 ALG6 226398 sc-eQTL 6.18e-02 0.172 0.0916 0.814 CD4T L1
ENSG00000116641 DOCK7 905587 sc-eQTL 6.00e-01 -0.0491 0.0934 0.814 CD4T L1
ENSG00000125703 ATG4C 809841 sc-eQTL 9.38e-01 -0.00592 0.0755 0.814 CD4T L1
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.15e-36 -1.14 0.0733 0.814 CD4T L1
ENSG00000158966 CACHD1 -876156 sc-eQTL 9.56e-01 -0.00352 0.0639 0.814 CD4T L1
ENSG00000203965 EFCAB7 70601 sc-eQTL 1.76e-04 -0.355 0.093 0.814 CD4T L1
ENSG00000079739 PGM1 562 sc-eQTL 2.45e-01 -0.105 0.0901 0.814 CD8T L1
ENSG00000088035 ALG6 226398 sc-eQTL 4.72e-01 -0.0717 0.0995 0.814 CD8T L1
ENSG00000116641 DOCK7 905587 sc-eQTL 4.50e-01 0.0763 0.101 0.814 CD8T L1
ENSG00000125703 ATG4C 809841 sc-eQTL 2.09e-01 0.12 0.0955 0.814 CD8T L1
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.01e-24 -0.977 0.0835 0.814 CD8T L1
ENSG00000158966 CACHD1 -876156 sc-eQTL 8.50e-01 -0.0103 0.0542 0.814 CD8T L1
ENSG00000203965 EFCAB7 70601 sc-eQTL 1.21e-05 -0.458 0.102 0.814 CD8T L1
ENSG00000079739 PGM1 562 sc-eQTL 7.39e-01 -0.0341 0.102 0.809 DC L1
ENSG00000088035 ALG6 226398 sc-eQTL 3.60e-01 0.0966 0.105 0.809 DC L1
ENSG00000116641 DOCK7 905587 sc-eQTL 8.91e-01 0.0148 0.108 0.809 DC L1
ENSG00000125703 ATG4C 809841 sc-eQTL 8.40e-01 -0.0171 0.0846 0.809 DC L1
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.22e-04 -0.447 0.114 0.809 DC L1
ENSG00000203965 EFCAB7 70601 sc-eQTL 1.98e-02 -0.239 0.102 0.809 DC L1
ENSG00000079739 PGM1 562 sc-eQTL 3.54e-01 -0.0911 0.0981 0.814 Mono L1
ENSG00000088035 ALG6 226398 sc-eQTL 4.17e-03 0.291 0.101 0.814 Mono L1
ENSG00000116641 DOCK7 905587 sc-eQTL 1.68e-01 -0.137 0.0988 0.814 Mono L1
ENSG00000125703 ATG4C 809841 sc-eQTL 4.79e-01 0.0474 0.067 0.814 Mono L1
ENSG00000142856 ITGB3BP 252 sc-eQTL 9.06e-15 -0.767 0.0919 0.814 Mono L1
ENSG00000079739 PGM1 562 sc-eQTL 4.32e-01 0.0657 0.0834 0.813 NK L1
ENSG00000088035 ALG6 226398 sc-eQTL 2.55e-01 0.112 0.0977 0.813 NK L1
ENSG00000116641 DOCK7 905587 sc-eQTL 4.72e-01 -0.058 0.0806 0.813 NK L1
ENSG00000125703 ATG4C 809841 sc-eQTL 5.02e-01 -0.0582 0.0866 0.813 NK L1
ENSG00000142856 ITGB3BP 252 sc-eQTL 3.24e-10 -0.647 0.098 0.813 NK L1
ENSG00000203965 EFCAB7 70601 sc-eQTL 4.47e-01 -0.0889 0.117 0.813 NK L1
ENSG00000079739 PGM1 562 sc-eQTL 4.93e-01 -0.0655 0.0954 0.814 Other_T L1
ENSG00000088035 ALG6 226398 sc-eQTL 7.11e-01 0.0355 0.0959 0.814 Other_T L1
ENSG00000116641 DOCK7 905587 sc-eQTL 7.43e-01 -0.0322 0.0979 0.814 Other_T L1
ENSG00000125703 ATG4C 809841 sc-eQTL 2.21e-02 0.193 0.0837 0.814 Other_T L1
ENSG00000142856 ITGB3BP 252 sc-eQTL 3.11e-02 -0.161 0.0744 0.814 Other_T L1
ENSG00000203965 EFCAB7 70601 sc-eQTL 4.68e-02 -0.23 0.115 0.814 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 562 sc-eQTL 8.04e-01 -0.032 0.129 0.829 B_Activated L2
ENSG00000088035 ALG6 226398 sc-eQTL 9.27e-01 -0.0113 0.124 0.829 B_Activated L2
ENSG00000116641 DOCK7 905587 sc-eQTL 6.32e-01 0.0551 0.115 0.829 B_Activated L2
ENSG00000125703 ATG4C 809841 sc-eQTL 4.85e-01 0.0845 0.121 0.829 B_Activated L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.12e-03 -0.38 0.115 0.829 B_Activated L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 7.09e-01 -0.0418 0.112 0.829 B_Activated L2
ENSG00000079739 PGM1 562 sc-eQTL 7.34e-01 -0.0388 0.114 0.813 B_Intermediate L2
ENSG00000088035 ALG6 226398 sc-eQTL 5.06e-01 -0.0772 0.116 0.813 B_Intermediate L2
ENSG00000116641 DOCK7 905587 sc-eQTL 5.45e-01 -0.0672 0.111 0.813 B_Intermediate L2
ENSG00000125703 ATG4C 809841 sc-eQTL 6.83e-01 0.0383 0.0937 0.813 B_Intermediate L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.61e-08 -0.608 0.104 0.813 B_Intermediate L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 1.79e-04 -0.408 0.107 0.813 B_Intermediate L2
ENSG00000079739 PGM1 562 sc-eQTL 2.47e-01 -0.129 0.111 0.812 B_Memory L2
ENSG00000088035 ALG6 226398 sc-eQTL 4.41e-01 0.0875 0.113 0.812 B_Memory L2
ENSG00000116641 DOCK7 905587 sc-eQTL 7.00e-02 -0.193 0.106 0.812 B_Memory L2
ENSG00000125703 ATG4C 809841 sc-eQTL 9.55e-01 -0.00567 0.101 0.812 B_Memory L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.77e-05 -0.487 0.111 0.812 B_Memory L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 5.04e-03 -0.32 0.113 0.812 B_Memory L2
ENSG00000079739 PGM1 562 sc-eQTL 8.89e-02 -0.193 0.113 0.814 B_Naive1 L2
ENSG00000088035 ALG6 226398 sc-eQTL 5.40e-01 0.07 0.114 0.814 B_Naive1 L2
ENSG00000116641 DOCK7 905587 sc-eQTL 2.63e-01 0.123 0.109 0.814 B_Naive1 L2
ENSG00000125703 ATG4C 809841 sc-eQTL 4.98e-01 -0.0572 0.0842 0.814 B_Naive1 L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 2.20e-19 -0.919 0.0923 0.814 B_Naive1 L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 4.69e-06 -0.534 0.114 0.814 B_Naive1 L2
ENSG00000079739 PGM1 562 sc-eQTL 9.03e-03 -0.292 0.111 0.813 B_Naive2 L2
ENSG00000088035 ALG6 226398 sc-eQTL 4.80e-01 0.0829 0.117 0.813 B_Naive2 L2
ENSG00000116641 DOCK7 905587 sc-eQTL 4.89e-01 0.0782 0.113 0.813 B_Naive2 L2
ENSG00000125703 ATG4C 809841 sc-eQTL 7.47e-01 0.035 0.109 0.813 B_Naive2 L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 6.55e-15 -0.857 0.102 0.813 B_Naive2 L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 3.89e-01 0.101 0.117 0.813 B_Naive2 L2
ENSG00000079739 PGM1 562 sc-eQTL 5.13e-01 -0.0755 0.115 0.814 CD4_CTL L2
ENSG00000088035 ALG6 226398 sc-eQTL 1.17e-01 -0.191 0.121 0.814 CD4_CTL L2
ENSG00000116641 DOCK7 905587 sc-eQTL 6.16e-01 0.0535 0.106 0.814 CD4_CTL L2
ENSG00000125703 ATG4C 809841 sc-eQTL 4.63e-01 0.081 0.11 0.814 CD4_CTL L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 2.29e-01 -0.142 0.117 0.814 CD4_CTL L2
ENSG00000158966 CACHD1 -876156 sc-eQTL 5.58e-01 -0.0251 0.0428 0.814 CD4_CTL L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 9.33e-01 0.00948 0.112 0.814 CD4_CTL L2
ENSG00000079739 PGM1 562 sc-eQTL 5.99e-01 -0.0492 0.0933 0.814 CD4_Naive L2
ENSG00000088035 ALG6 226398 sc-eQTL 1.09e-02 0.257 0.0999 0.814 CD4_Naive L2
ENSG00000116641 DOCK7 905587 sc-eQTL 5.08e-01 -0.066 0.0996 0.814 CD4_Naive L2
ENSG00000125703 ATG4C 809841 sc-eQTL 7.37e-01 -0.0296 0.0881 0.814 CD4_Naive L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 2.22e-27 -1.02 0.0815 0.814 CD4_Naive L2
ENSG00000158966 CACHD1 -876156 sc-eQTL 9.07e-01 -0.00744 0.0638 0.814 CD4_Naive L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 6.86e-03 -0.287 0.105 0.814 CD4_Naive L2
ENSG00000079739 PGM1 562 sc-eQTL 9.10e-02 -0.163 0.0961 0.814 CD4_TCM L2
ENSG00000088035 ALG6 226398 sc-eQTL 5.17e-01 -0.0728 0.112 0.814 CD4_TCM L2
ENSG00000116641 DOCK7 905587 sc-eQTL 6.17e-01 -0.0499 0.0995 0.814 CD4_TCM L2
ENSG00000125703 ATG4C 809841 sc-eQTL 4.27e-02 -0.196 0.096 0.814 CD4_TCM L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.19e-18 -0.922 0.095 0.814 CD4_TCM L2
ENSG00000158966 CACHD1 -876156 sc-eQTL 3.88e-01 0.0781 0.0904 0.814 CD4_TCM L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 1.85e-03 -0.341 0.108 0.814 CD4_TCM L2
ENSG00000079739 PGM1 562 sc-eQTL 6.49e-01 0.0516 0.113 0.814 CD4_TEM L2
ENSG00000088035 ALG6 226398 sc-eQTL 3.77e-01 0.101 0.114 0.814 CD4_TEM L2
ENSG00000116641 DOCK7 905587 sc-eQTL 7.13e-01 0.0408 0.111 0.814 CD4_TEM L2
ENSG00000125703 ATG4C 809841 sc-eQTL 4.46e-02 0.216 0.107 0.814 CD4_TEM L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 3.02e-05 -0.455 0.107 0.814 CD4_TEM L2
ENSG00000158966 CACHD1 -876156 sc-eQTL 5.08e-01 -0.0456 0.0687 0.814 CD4_TEM L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 4.03e-01 -0.0964 0.115 0.814 CD4_TEM L2
ENSG00000079739 PGM1 562 sc-eQTL 5.92e-01 -0.0555 0.103 0.814 CD8_CTL L2
ENSG00000088035 ALG6 226398 sc-eQTL 6.60e-01 0.0484 0.11 0.814 CD8_CTL L2
ENSG00000116641 DOCK7 905587 sc-eQTL 6.45e-01 0.0482 0.104 0.814 CD8_CTL L2
ENSG00000125703 ATG4C 809841 sc-eQTL 8.98e-01 0.0142 0.111 0.814 CD8_CTL L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 2.75e-09 -0.66 0.106 0.814 CD8_CTL L2
ENSG00000158966 CACHD1 -876156 sc-eQTL 2.14e-01 0.0608 0.0488 0.814 CD8_CTL L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 1.38e-01 -0.175 0.118 0.814 CD8_CTL L2
ENSG00000079739 PGM1 562 sc-eQTL 9.41e-01 -0.0077 0.105 0.814 CD8_Naive L2
ENSG00000088035 ALG6 226398 sc-eQTL 3.78e-01 -0.0955 0.108 0.814 CD8_Naive L2
ENSG00000116641 DOCK7 905587 sc-eQTL 2.96e-01 0.117 0.112 0.814 CD8_Naive L2
ENSG00000125703 ATG4C 809841 sc-eQTL 8.83e-01 0.0158 0.107 0.814 CD8_Naive L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 3.03e-17 -0.848 0.0919 0.814 CD8_Naive L2
ENSG00000158966 CACHD1 -876156 sc-eQTL 8.59e-01 -0.0134 0.0755 0.814 CD8_Naive L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 5.95e-04 -0.348 0.0998 0.814 CD8_Naive L2
ENSG00000079739 PGM1 562 sc-eQTL 9.85e-01 0.00207 0.114 0.819 CD8_TCM L2
ENSG00000088035 ALG6 226398 sc-eQTL 1.97e-01 -0.148 0.114 0.819 CD8_TCM L2
ENSG00000116641 DOCK7 905587 sc-eQTL 8.92e-01 0.0152 0.112 0.819 CD8_TCM L2
ENSG00000125703 ATG4C 809841 sc-eQTL 6.07e-01 -0.059 0.115 0.819 CD8_TCM L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.63e-07 -0.565 0.104 0.819 CD8_TCM L2
ENSG00000158966 CACHD1 -876156 sc-eQTL 7.90e-01 0.0156 0.0586 0.819 CD8_TCM L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 4.66e-01 -0.083 0.113 0.819 CD8_TCM L2
ENSG00000079739 PGM1 562 sc-eQTL 2.18e-01 -0.14 0.114 0.806 CD8_TEM L2
ENSG00000088035 ALG6 226398 sc-eQTL 5.99e-01 -0.0602 0.114 0.806 CD8_TEM L2
ENSG00000116641 DOCK7 905587 sc-eQTL 8.43e-01 0.022 0.111 0.806 CD8_TEM L2
ENSG00000125703 ATG4C 809841 sc-eQTL 9.45e-03 0.275 0.105 0.806 CD8_TEM L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.67e-02 -0.275 0.114 0.806 CD8_TEM L2
ENSG00000158966 CACHD1 -876156 sc-eQTL 9.98e-01 -6.17e-05 0.0235 0.806 CD8_TEM L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 1.63e-01 -0.156 0.112 0.806 CD8_TEM L2
ENSG00000079739 PGM1 562 sc-eQTL 9.34e-01 -0.00917 0.111 0.812 MAIT L2
ENSG00000088035 ALG6 226398 sc-eQTL 9.93e-01 0.00102 0.109 0.812 MAIT L2
ENSG00000116641 DOCK7 905587 sc-eQTL 7.14e-01 0.0385 0.105 0.812 MAIT L2
ENSG00000125703 ATG4C 809841 sc-eQTL 6.09e-02 0.207 0.11 0.812 MAIT L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.34e-06 -0.521 0.105 0.812 MAIT L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 1.95e-01 -0.148 0.114 0.812 MAIT L2
ENSG00000079739 PGM1 562 sc-eQTL 9.83e-01 -0.00231 0.11 0.818 NK_CD56bright L2
ENSG00000088035 ALG6 226398 sc-eQTL 2.83e-01 0.121 0.113 0.818 NK_CD56bright L2
ENSG00000116641 DOCK7 905587 sc-eQTL 7.93e-01 -0.0257 0.0978 0.818 NK_CD56bright L2
ENSG00000125703 ATG4C 809841 sc-eQTL 5.24e-01 0.0697 0.109 0.818 NK_CD56bright L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 5.67e-03 -0.312 0.112 0.818 NK_CD56bright L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 3.58e-01 -0.103 0.112 0.818 NK_CD56bright L2
ENSG00000079739 PGM1 562 sc-eQTL 4.21e-01 0.07 0.0869 0.815 NK_CD56dim L2
ENSG00000088035 ALG6 226398 sc-eQTL 8.52e-01 -0.0206 0.11 0.815 NK_CD56dim L2
ENSG00000116641 DOCK7 905587 sc-eQTL 1.72e-01 -0.131 0.0956 0.815 NK_CD56dim L2
ENSG00000125703 ATG4C 809841 sc-eQTL 3.96e-02 -0.2 0.0966 0.815 NK_CD56dim L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 3.26e-05 -0.452 0.107 0.815 NK_CD56dim L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 8.32e-01 0.0255 0.12 0.815 NK_CD56dim L2
ENSG00000079739 PGM1 562 sc-eQTL 1.21e-01 -0.184 0.118 0.82 NK_HLA L2
ENSG00000088035 ALG6 226398 sc-eQTL 1.58e-01 0.174 0.123 0.82 NK_HLA L2
ENSG00000116641 DOCK7 905587 sc-eQTL 8.12e-01 0.0225 0.0944 0.82 NK_HLA L2
ENSG00000125703 ATG4C 809841 sc-eQTL 6.87e-01 0.0443 0.11 0.82 NK_HLA L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.07e-02 -0.292 0.113 0.82 NK_HLA L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 8.65e-01 0.0188 0.11 0.82 NK_HLA L2
ENSG00000079739 PGM1 562 sc-eQTL 1.89e-01 0.126 0.0953 0.815 NK_cytokine L2
ENSG00000088035 ALG6 226398 sc-eQTL 2.23e-01 0.132 0.108 0.815 NK_cytokine L2
ENSG00000116641 DOCK7 905587 sc-eQTL 8.21e-01 0.0227 0.1 0.815 NK_cytokine L2
ENSG00000125703 ATG4C 809841 sc-eQTL 5.73e-01 0.0578 0.102 0.815 NK_cytokine L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.04e-07 -0.546 0.0991 0.815 NK_cytokine L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 9.13e-01 -0.0123 0.113 0.815 NK_cytokine L2
ENSG00000079739 PGM1 562 sc-eQTL 5.22e-02 -0.29 0.148 0.826 PB L2
ENSG00000088035 ALG6 226398 sc-eQTL 1.08e-01 0.252 0.156 0.826 PB L2
ENSG00000116641 DOCK7 905587 sc-eQTL 9.98e-01 0.000513 0.169 0.826 PB L2
ENSG00000125703 ATG4C 809841 sc-eQTL 8.34e-01 -0.0309 0.147 0.826 PB L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 4.34e-03 -0.412 0.141 0.826 PB L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 1.07e-01 -0.259 0.159 0.826 PB L2
ENSG00000079739 PGM1 562 sc-eQTL 5.49e-01 -0.0614 0.102 0.815 Pro_T L2
ENSG00000088035 ALG6 226398 sc-eQTL 5.38e-01 -0.0642 0.104 0.815 Pro_T L2
ENSG00000116641 DOCK7 905587 sc-eQTL 4.59e-02 -0.208 0.103 0.815 Pro_T L2
ENSG00000125703 ATG4C 809841 sc-eQTL 2.63e-01 -0.102 0.0912 0.815 Pro_T L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.32e-06 0.432 0.0867 0.815 Pro_T L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 5.87e-01 0.0579 0.107 0.815 Pro_T L2
ENSG00000079739 PGM1 562 sc-eQTL 6.55e-01 -0.0487 0.109 0.814 Treg L2
ENSG00000088035 ALG6 226398 sc-eQTL 3.32e-01 0.113 0.116 0.814 Treg L2
ENSG00000116641 DOCK7 905587 sc-eQTL 5.85e-01 0.0585 0.107 0.814 Treg L2
ENSG00000125703 ATG4C 809841 sc-eQTL 1.62e-01 0.153 0.109 0.814 Treg L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.32e-02 -0.282 0.113 0.814 Treg L2
ENSG00000158966 CACHD1 -876156 sc-eQTL 3.35e-02 -0.183 0.0855 0.814 Treg L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 9.11e-01 -0.0123 0.109 0.814 Treg L2
ENSG00000079739 PGM1 562 sc-eQTL 4.31e-01 -0.0859 0.109 0.807 cDC L2
ENSG00000088035 ALG6 226398 sc-eQTL 4.84e-01 0.0775 0.11 0.807 cDC L2
ENSG00000116641 DOCK7 905587 sc-eQTL 5.08e-01 0.0719 0.108 0.807 cDC L2
ENSG00000125703 ATG4C 809841 sc-eQTL 9.37e-01 0.00743 0.0942 0.807 cDC L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 6.34e-03 -0.323 0.117 0.807 cDC L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 5.65e-01 -0.0552 0.0959 0.807 cDC L2
ENSG00000079739 PGM1 562 sc-eQTL 8.14e-01 0.0241 0.102 0.814 cMono_IL1B L2
ENSG00000088035 ALG6 226398 sc-eQTL 1.37e-01 0.152 0.102 0.814 cMono_IL1B L2
ENSG00000116641 DOCK7 905587 sc-eQTL 4.91e-01 -0.0743 0.108 0.814 cMono_IL1B L2
ENSG00000125703 ATG4C 809841 sc-eQTL 7.24e-01 0.0268 0.0758 0.814 cMono_IL1B L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 9.94e-12 -0.694 0.0962 0.814 cMono_IL1B L2
ENSG00000079739 PGM1 562 sc-eQTL 1.28e-01 -0.173 0.114 0.814 cMono_S100A L2
ENSG00000088035 ALG6 226398 sc-eQTL 1.30e-01 0.175 0.115 0.814 cMono_S100A L2
ENSG00000116641 DOCK7 905587 sc-eQTL 5.66e-01 -0.0617 0.107 0.814 cMono_S100A L2
ENSG00000125703 ATG4C 809841 sc-eQTL 2.79e-01 0.101 0.0927 0.814 cMono_S100A L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 5.93e-04 -0.356 0.102 0.814 cMono_S100A L2
ENSG00000079739 PGM1 562 sc-eQTL 6.51e-01 -0.0562 0.124 0.818 gdT L2
ENSG00000088035 ALG6 226398 sc-eQTL 4.25e-01 -0.106 0.132 0.818 gdT L2
ENSG00000116641 DOCK7 905587 sc-eQTL 9.86e-01 -0.00232 0.13 0.818 gdT L2
ENSG00000125703 ATG4C 809841 sc-eQTL 9.32e-01 0.0107 0.124 0.818 gdT L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 5.28e-02 -0.254 0.13 0.818 gdT L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 5.89e-01 -0.0701 0.13 0.818 gdT L2
ENSG00000079739 PGM1 562 sc-eQTL 3.13e-01 -0.115 0.114 0.813 intMono L2
ENSG00000088035 ALG6 226398 sc-eQTL 3.91e-01 0.0915 0.106 0.813 intMono L2
ENSG00000116641 DOCK7 905587 sc-eQTL 5.29e-01 -0.0685 0.109 0.813 intMono L2
ENSG00000125703 ATG4C 809841 sc-eQTL 3.21e-01 0.103 0.104 0.813 intMono L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.71e-05 -0.482 0.109 0.813 intMono L2
ENSG00000079739 PGM1 562 sc-eQTL 3.45e-01 -0.0967 0.102 0.814 ncMono L2
ENSG00000088035 ALG6 226398 sc-eQTL 3.00e-01 0.117 0.112 0.814 ncMono L2
ENSG00000116641 DOCK7 905587 sc-eQTL 3.34e-01 -0.107 0.11 0.814 ncMono L2
ENSG00000125703 ATG4C 809841 sc-eQTL 3.95e-01 -0.088 0.103 0.814 ncMono L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 2.19e-02 -0.247 0.107 0.814 ncMono L2
ENSG00000079739 PGM1 562 sc-eQTL 5.99e-01 -0.0625 0.119 0.797 pDC L2
ENSG00000088035 ALG6 226398 sc-eQTL 4.62e-01 0.0851 0.115 0.797 pDC L2
ENSG00000116641 DOCK7 905587 sc-eQTL 9.21e-01 -0.0117 0.118 0.797 pDC L2
ENSG00000125703 ATG4C 809841 sc-eQTL 9.51e-01 0.00646 0.106 0.797 pDC L2
ENSG00000142856 ITGB3BP 252 sc-eQTL 1.46e-02 -0.288 0.117 0.797 pDC L2
ENSG00000203965 EFCAB7 70601 sc-eQTL 1.46e-02 -0.255 0.103 0.797 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 562 sc-eQTL 3.00e-01 -0.111 0.107 0.814 B_Memory LOneK1K
ENSG00000088035 ALG6 226398 sc-eQTL 8.30e-01 0.0254 0.118 0.814 B_Memory LOneK1K
ENSG00000116641 DOCK7 905587 sc-eQTL 4.32e-01 -0.0808 0.103 0.814 B_Memory LOneK1K
ENSG00000125703 ATG4C 809841 sc-eQTL 8.59e-01 0.0148 0.083 0.814 B_Memory LOneK1K
ENSG00000142856 ITGB3BP 252 sc-eQTL 5.10e-14 -0.77 0.0953 0.814 B_Memory LOneK1K
ENSG00000203965 EFCAB7 70601 sc-eQTL 1.37e-05 -0.484 0.109 0.814 B_Memory LOneK1K
ENSG00000079739 PGM1 562 sc-eQTL 6.55e-03 -0.3 0.109 0.814 B_Naive LOneK1K
ENSG00000088035 ALG6 226398 sc-eQTL 4.39e-01 0.0886 0.114 0.814 B_Naive LOneK1K
ENSG00000116641 DOCK7 905587 sc-eQTL 5.09e-01 0.0706 0.107 0.814 B_Naive LOneK1K
ENSG00000125703 ATG4C 809841 sc-eQTL 6.38e-01 -0.0384 0.0814 0.814 B_Naive LOneK1K
ENSG00000142856 ITGB3BP 252 sc-eQTL 3.17e-26 -1.08 0.0883 0.814 B_Naive LOneK1K
ENSG00000203965 EFCAB7 70601 sc-eQTL 6.80e-04 -0.389 0.113 0.814 B_Naive LOneK1K
ENSG00000079739 PGM1 562 sc-eQTL 6.24e-01 -0.0516 0.105 0.814 CD14_Mono LOneK1K
ENSG00000088035 ALG6 226398 sc-eQTL 4.06e-02 0.207 0.101 0.814 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 905587 sc-eQTL 2.63e-01 -0.115 0.102 0.814 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 809841 sc-eQTL 3.88e-01 0.0612 0.0706 0.814 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP 252 sc-eQTL 8.96e-12 -0.677 0.0937 0.814 CD14_Mono LOneK1K
ENSG00000079739 PGM1 562 sc-eQTL 1.13e-01 -0.158 0.0991 0.812 CD16_Mono LOneK1K
ENSG00000088035 ALG6 226398 sc-eQTL 3.24e-02 0.241 0.112 0.812 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 905587 sc-eQTL 3.94e-01 -0.0955 0.112 0.812 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 809841 sc-eQTL 8.21e-01 0.0216 0.0955 0.812 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP 252 sc-eQTL 2.61e-05 -0.457 0.106 0.812 CD16_Mono LOneK1K
ENSG00000079739 PGM1 562 sc-eQTL 4.54e-01 0.0636 0.0848 0.815 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 226398 sc-eQTL 4.57e-01 0.0759 0.102 0.815 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 905587 sc-eQTL 6.32e-01 -0.0438 0.0913 0.815 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 809841 sc-eQTL 3.89e-01 -0.0786 0.091 0.815 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP 252 sc-eQTL 2.40e-09 -0.619 0.0992 0.815 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 70601 sc-eQTL 6.34e-01 -0.0568 0.119 0.815 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000088035 ALG6 226398 eQTL 2.74e-12 0.111 0.0156 0.00804 0.0186 0.215
ENSG00000142856 ITGB3BP 252 eQTL 1.93e-30 -0.393 0.0331 0.00188 0.0 0.215
ENSG00000230798 FOXD3-AS1 269532 eQTL 0.00161 0.0992 0.0314 0.00375 0.00342 0.215

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000088035 ALG6 226398 4.47e-05 3.82e-05 5.92e-06 1.65e-05 6.08e-06 1.17e-05 4.55e-05 5.02e-06 3.05e-05 1.44e-05 4.45e-05 1.79e-05 5e-05 1.63e-05 6.24e-06 2e-05 1.22e-05 2.66e-05 8.54e-06 7.31e-06 1.49e-05 3.91e-05 3.36e-05 1.05e-05 3.79e-05 7.01e-06 1.53e-05 1.55e-05 2.69e-05 2.03e-05 2.13e-05 1.64e-06 2.68e-06 6.84e-06 1.1e-05 6.24e-06 3.32e-06 3.17e-06 4.54e-06 3.28e-06 1.75e-06 3.81e-05 4.6e-06 4.37e-07 2.63e-06 5.28e-06 4.14e-06 1.44e-06 1.4e-06
ENSG00000142856 ITGB3BP 252 0.000365 0.000453 6.69e-05 0.000142 0.00011 0.000148 0.000424 8.72e-05 0.000374 0.000198 0.000466 0.00021 0.000532 0.000195 9.45e-05 0.000273 0.000186 0.00027 0.00011 8.28e-05 0.00023 0.000425 0.000342 0.000119 0.000475 0.000156 0.000218 0.000177 0.000363 0.000194 0.000241 3.34e-05 3.88e-05 7.71e-05 0.000103 6.14e-05 4.29e-05 3.94e-05 6.45e-05 4.44e-05 2.98e-05 0.000474 5.9e-05 4.93e-06 5.7e-05 6.11e-05 6.4e-05 3.03e-05 2.49e-05
ENSG00000230798 FOXD3-AS1 269532 3.39e-05 3.34e-05 4.47e-06 1.55e-05 5.1e-06 8.76e-06 3.78e-05 3.87e-06 2.41e-05 1.13e-05 3.66e-05 1.37e-05 4.02e-05 1.35e-05 5.37e-06 1.48e-05 9.2e-06 2.17e-05 7.49e-06 5.73e-06 1.25e-05 3.08e-05 2.82e-05 8.69e-06 3.04e-05 5.77e-06 1.15e-05 1.24e-05 2.12e-05 1.63e-05 1.7e-05 1.65e-06 2.23e-06 5.43e-06 9.01e-06 5.45e-06 2.76e-06 2.86e-06 3.56e-06 2.67e-06 1.64e-06 3.25e-05 3.49e-06 4.21e-07 2.12e-06 4.53e-06 3.67e-06 1.26e-06 1.08e-06