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Genes within 1Mb (chr1:63567377:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -26034 sc-eQTL 1.14e-01 0.122 0.0767 0.376 B L1
ENSG00000088035 ALG6 199802 sc-eQTL 5.82e-01 0.044 0.0799 0.376 B L1
ENSG00000116641 DOCK7 878991 sc-eQTL 3.31e-01 -0.0777 0.0797 0.376 B L1
ENSG00000125703 ATG4C 783245 sc-eQTL 8.58e-01 -0.00998 0.0555 0.376 B L1
ENSG00000142856 ITGB3BP -26344 sc-eQTL 7.48e-07 -0.426 0.0834 0.376 B L1
ENSG00000203965 EFCAB7 44005 sc-eQTL 3.00e-05 -0.371 0.0869 0.376 B L1
ENSG00000079739 PGM1 -26034 sc-eQTL 2.32e-01 0.0785 0.0654 0.376 CD4T L1
ENSG00000088035 ALG6 199802 sc-eQTL 4.50e-01 0.0547 0.0723 0.376 CD4T L1
ENSG00000116641 DOCK7 878991 sc-eQTL 6.99e-01 -0.0284 0.0733 0.376 CD4T L1
ENSG00000125703 ATG4C 783245 sc-eQTL 4.69e-01 0.0429 0.0591 0.376 CD4T L1
ENSG00000142856 ITGB3BP -26344 sc-eQTL 7.65e-06 -0.368 0.0801 0.376 CD4T L1
ENSG00000158966 CACHD1 -902752 sc-eQTL 1.67e-01 0.0692 0.0499 0.376 CD4T L1
ENSG00000203965 EFCAB7 44005 sc-eQTL 2.74e-03 -0.224 0.0738 0.376 CD4T L1
ENSG00000079739 PGM1 -26034 sc-eQTL 8.71e-01 -0.0118 0.0722 0.376 CD8T L1
ENSG00000088035 ALG6 199802 sc-eQTL 6.42e-01 -0.037 0.0796 0.376 CD8T L1
ENSG00000116641 DOCK7 878991 sc-eQTL 9.38e-01 -0.00631 0.0807 0.376 CD8T L1
ENSG00000125703 ATG4C 783245 sc-eQTL 2.59e-01 0.0865 0.0764 0.376 CD8T L1
ENSG00000142856 ITGB3BP -26344 sc-eQTL 6.69e-07 -0.414 0.0808 0.376 CD8T L1
ENSG00000158966 CACHD1 -902752 sc-eQTL 3.43e-01 0.0412 0.0433 0.376 CD8T L1
ENSG00000203965 EFCAB7 44005 sc-eQTL 5.98e-04 -0.29 0.0831 0.376 CD8T L1
ENSG00000079739 PGM1 -26034 sc-eQTL 4.26e-01 0.0646 0.0811 0.374 DC L1
ENSG00000088035 ALG6 199802 sc-eQTL 8.32e-02 0.145 0.0832 0.374 DC L1
ENSG00000116641 DOCK7 878991 sc-eQTL 7.89e-01 -0.023 0.0859 0.374 DC L1
ENSG00000125703 ATG4C 783245 sc-eQTL 6.71e-01 -0.0286 0.0672 0.374 DC L1
ENSG00000142856 ITGB3BP -26344 sc-eQTL 3.99e-01 -0.0792 0.0938 0.374 DC L1
ENSG00000203965 EFCAB7 44005 sc-eQTL 3.12e-01 -0.0827 0.0815 0.374 DC L1
ENSG00000079739 PGM1 -26034 sc-eQTL 7.60e-01 0.0238 0.0779 0.376 Mono L1
ENSG00000088035 ALG6 199802 sc-eQTL 6.21e-01 0.0402 0.0813 0.376 Mono L1
ENSG00000116641 DOCK7 878991 sc-eQTL 5.31e-02 -0.152 0.078 0.376 Mono L1
ENSG00000125703 ATG4C 783245 sc-eQTL 9.37e-02 0.0889 0.0528 0.376 Mono L1
ENSG00000142856 ITGB3BP -26344 sc-eQTL 8.99e-04 -0.276 0.0818 0.376 Mono L1
ENSG00000079739 PGM1 -26034 sc-eQTL 5.14e-01 0.0437 0.0667 0.376 NK L1
ENSG00000088035 ALG6 199802 sc-eQTL 3.93e-02 0.161 0.0775 0.376 NK L1
ENSG00000116641 DOCK7 878991 sc-eQTL 5.06e-01 0.043 0.0644 0.376 NK L1
ENSG00000125703 ATG4C 783245 sc-eQTL 8.62e-01 -0.012 0.0693 0.376 NK L1
ENSG00000142856 ITGB3BP -26344 sc-eQTL 1.23e-03 -0.275 0.084 0.376 NK L1
ENSG00000203965 EFCAB7 44005 sc-eQTL 3.86e-01 -0.081 0.0933 0.376 NK L1
ENSG00000079739 PGM1 -26034 sc-eQTL 5.91e-01 -0.0409 0.076 0.376 Other_T L1
ENSG00000088035 ALG6 199802 sc-eQTL 5.39e-01 -0.047 0.0763 0.376 Other_T L1
ENSG00000116641 DOCK7 878991 sc-eQTL 6.98e-01 0.0302 0.0779 0.376 Other_T L1
ENSG00000125703 ATG4C 783245 sc-eQTL 2.99e-02 0.146 0.0667 0.376 Other_T L1
ENSG00000142856 ITGB3BP -26344 sc-eQTL 2.57e-01 -0.0679 0.0597 0.376 Other_T L1
ENSG00000203965 EFCAB7 44005 sc-eQTL 6.78e-01 -0.0384 0.0923 0.376 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -26034 sc-eQTL 3.95e-01 0.0887 0.104 0.372 B_Activated L2
ENSG00000088035 ALG6 199802 sc-eQTL 1.95e-01 0.13 0.0995 0.372 B_Activated L2
ENSG00000116641 DOCK7 878991 sc-eQTL 6.90e-01 0.0372 0.093 0.372 B_Activated L2
ENSG00000125703 ATG4C 783245 sc-eQTL 5.92e-01 0.0525 0.0978 0.372 B_Activated L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 9.16e-02 -0.161 0.0949 0.372 B_Activated L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 2.48e-01 -0.105 0.0902 0.372 B_Activated L2
ENSG00000079739 PGM1 -26034 sc-eQTL 1.32e-01 0.135 0.0894 0.378 B_Intermediate L2
ENSG00000088035 ALG6 199802 sc-eQTL 2.12e-01 -0.114 0.091 0.378 B_Intermediate L2
ENSG00000116641 DOCK7 878991 sc-eQTL 9.78e-01 0.00244 0.0872 0.378 B_Intermediate L2
ENSG00000125703 ATG4C 783245 sc-eQTL 1.37e-01 0.11 0.0734 0.378 B_Intermediate L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 8.67e-03 -0.229 0.0865 0.378 B_Intermediate L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 6.05e-04 -0.295 0.0847 0.378 B_Intermediate L2
ENSG00000079739 PGM1 -26034 sc-eQTL 9.38e-01 0.00685 0.0887 0.375 B_Memory L2
ENSG00000088035 ALG6 199802 sc-eQTL 3.29e-01 0.088 0.0899 0.375 B_Memory L2
ENSG00000116641 DOCK7 878991 sc-eQTL 9.73e-02 -0.14 0.084 0.375 B_Memory L2
ENSG00000125703 ATG4C 783245 sc-eQTL 9.42e-01 -0.00586 0.0803 0.375 B_Memory L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 1.65e-01 -0.127 0.0915 0.375 B_Memory L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 3.31e-02 -0.194 0.0903 0.375 B_Memory L2
ENSG00000079739 PGM1 -26034 sc-eQTL 1.91e-01 0.12 0.0914 0.376 B_Naive1 L2
ENSG00000088035 ALG6 199802 sc-eQTL 9.08e-01 0.0107 0.0921 0.376 B_Naive1 L2
ENSG00000116641 DOCK7 878991 sc-eQTL 7.60e-01 -0.027 0.0882 0.376 B_Naive1 L2
ENSG00000125703 ATG4C 783245 sc-eQTL 6.64e-01 0.0295 0.0679 0.376 B_Naive1 L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 1.23e-04 -0.341 0.0871 0.376 B_Naive1 L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 8.29e-04 -0.318 0.0937 0.376 B_Naive1 L2
ENSG00000079739 PGM1 -26034 sc-eQTL 4.97e-01 0.062 0.091 0.376 B_Naive2 L2
ENSG00000088035 ALG6 199802 sc-eQTL 4.01e-01 0.0798 0.0949 0.376 B_Naive2 L2
ENSG00000116641 DOCK7 878991 sc-eQTL 8.43e-01 0.0181 0.0914 0.376 B_Naive2 L2
ENSG00000125703 ATG4C 783245 sc-eQTL 8.16e-01 -0.0205 0.0879 0.376 B_Naive2 L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 8.12e-06 -0.416 0.0909 0.376 B_Naive2 L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 1.53e-01 0.135 0.0945 0.376 B_Naive2 L2
ENSG00000079739 PGM1 -26034 sc-eQTL 7.95e-01 -0.0233 0.0896 0.375 CD4_CTL L2
ENSG00000088035 ALG6 199802 sc-eQTL 2.57e-01 -0.107 0.0945 0.375 CD4_CTL L2
ENSG00000116641 DOCK7 878991 sc-eQTL 3.11e-01 0.084 0.0826 0.375 CD4_CTL L2
ENSG00000125703 ATG4C 783245 sc-eQTL 6.04e-01 -0.0444 0.0857 0.375 CD4_CTL L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 5.76e-01 -0.0514 0.0916 0.375 CD4_CTL L2
ENSG00000158966 CACHD1 -902752 sc-eQTL 9.65e-01 0.00147 0.0333 0.375 CD4_CTL L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 6.74e-01 0.0367 0.0871 0.375 CD4_CTL L2
ENSG00000079739 PGM1 -26034 sc-eQTL 1.42e-01 0.108 0.0729 0.376 CD4_Naive L2
ENSG00000088035 ALG6 199802 sc-eQTL 5.99e-01 0.0419 0.0796 0.376 CD4_Naive L2
ENSG00000116641 DOCK7 878991 sc-eQTL 8.78e-01 -0.0121 0.0783 0.376 CD4_Naive L2
ENSG00000125703 ATG4C 783245 sc-eQTL 5.14e-01 0.0452 0.0691 0.376 CD4_Naive L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 4.08e-05 -0.341 0.0812 0.376 CD4_Naive L2
ENSG00000158966 CACHD1 -902752 sc-eQTL 2.29e-01 0.0602 0.0499 0.376 CD4_Naive L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 2.83e-02 -0.183 0.083 0.376 CD4_Naive L2
ENSG00000079739 PGM1 -26034 sc-eQTL 8.01e-01 -0.0193 0.0766 0.376 CD4_TCM L2
ENSG00000088035 ALG6 199802 sc-eQTL 7.94e-01 0.0233 0.089 0.376 CD4_TCM L2
ENSG00000116641 DOCK7 878991 sc-eQTL 4.23e-02 -0.16 0.0781 0.376 CD4_TCM L2
ENSG00000125703 ATG4C 783245 sc-eQTL 2.69e-01 -0.0848 0.0766 0.376 CD4_TCM L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 1.32e-03 -0.288 0.0883 0.376 CD4_TCM L2
ENSG00000158966 CACHD1 -902752 sc-eQTL 9.81e-02 0.118 0.0713 0.376 CD4_TCM L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 6.20e-03 -0.238 0.0861 0.376 CD4_TCM L2
ENSG00000079739 PGM1 -26034 sc-eQTL 6.66e-02 0.164 0.0889 0.376 CD4_TEM L2
ENSG00000088035 ALG6 199802 sc-eQTL 9.35e-01 0.00735 0.0901 0.376 CD4_TEM L2
ENSG00000116641 DOCK7 878991 sc-eQTL 6.26e-01 0.0429 0.0878 0.376 CD4_TEM L2
ENSG00000125703 ATG4C 783245 sc-eQTL 1.40e-01 0.126 0.0849 0.376 CD4_TEM L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 2.68e-03 -0.262 0.0862 0.376 CD4_TEM L2
ENSG00000158966 CACHD1 -902752 sc-eQTL 9.35e-01 -0.00447 0.0544 0.376 CD4_TEM L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 5.96e-01 -0.0484 0.0912 0.376 CD4_TEM L2
ENSG00000079739 PGM1 -26034 sc-eQTL 6.61e-01 -0.0363 0.0827 0.376 CD8_CTL L2
ENSG00000088035 ALG6 199802 sc-eQTL 1.33e-01 -0.132 0.0875 0.376 CD8_CTL L2
ENSG00000116641 DOCK7 878991 sc-eQTL 7.03e-01 -0.0319 0.0834 0.376 CD8_CTL L2
ENSG00000125703 ATG4C 783245 sc-eQTL 6.15e-02 0.166 0.0881 0.376 CD8_CTL L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 9.60e-02 -0.153 0.0918 0.376 CD8_CTL L2
ENSG00000158966 CACHD1 -902752 sc-eQTL 5.50e-01 -0.0234 0.0391 0.376 CD8_CTL L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 1.75e-01 -0.128 0.0942 0.376 CD8_CTL L2
ENSG00000079739 PGM1 -26034 sc-eQTL 1.81e-01 0.11 0.0823 0.376 CD8_Naive L2
ENSG00000088035 ALG6 199802 sc-eQTL 7.56e-01 0.0267 0.0856 0.376 CD8_Naive L2
ENSG00000116641 DOCK7 878991 sc-eQTL 6.14e-01 -0.0447 0.0884 0.376 CD8_Naive L2
ENSG00000125703 ATG4C 783245 sc-eQTL 8.79e-01 0.0129 0.0849 0.376 CD8_Naive L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 9.58e-07 -0.41 0.0813 0.376 CD8_Naive L2
ENSG00000158966 CACHD1 -902752 sc-eQTL 5.59e-01 0.0349 0.0596 0.376 CD8_Naive L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 7.05e-02 -0.146 0.0805 0.376 CD8_Naive L2
ENSG00000079739 PGM1 -26034 sc-eQTL 9.62e-01 -0.00428 0.09 0.377 CD8_TCM L2
ENSG00000088035 ALG6 199802 sc-eQTL 7.86e-01 -0.0247 0.0911 0.377 CD8_TCM L2
ENSG00000116641 DOCK7 878991 sc-eQTL 7.28e-01 -0.0309 0.0889 0.377 CD8_TCM L2
ENSG00000125703 ATG4C 783245 sc-eQTL 7.91e-01 -0.0241 0.0909 0.377 CD8_TCM L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 3.13e-01 -0.0892 0.0881 0.377 CD8_TCM L2
ENSG00000158966 CACHD1 -902752 sc-eQTL 5.02e-01 0.0312 0.0463 0.377 CD8_TCM L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 1.27e-01 -0.137 0.0895 0.377 CD8_TCM L2
ENSG00000079739 PGM1 -26034 sc-eQTL 6.88e-02 -0.167 0.0915 0.365 CD8_TEM L2
ENSG00000088035 ALG6 199802 sc-eQTL 6.31e-01 0.0445 0.0926 0.365 CD8_TEM L2
ENSG00000116641 DOCK7 878991 sc-eQTL 4.73e-01 -0.0644 0.0897 0.365 CD8_TEM L2
ENSG00000125703 ATG4C 783245 sc-eQTL 6.76e-02 0.157 0.0856 0.365 CD8_TEM L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 1.17e-01 -0.146 0.0929 0.365 CD8_TEM L2
ENSG00000158966 CACHD1 -902752 sc-eQTL 3.39e-01 -0.0182 0.019 0.365 CD8_TEM L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 7.35e-02 -0.162 0.0899 0.365 CD8_TEM L2
ENSG00000079739 PGM1 -26034 sc-eQTL 7.46e-01 -0.0289 0.089 0.374 MAIT L2
ENSG00000088035 ALG6 199802 sc-eQTL 1.58e-01 -0.124 0.0877 0.374 MAIT L2
ENSG00000116641 DOCK7 878991 sc-eQTL 8.08e-01 0.0206 0.0844 0.374 MAIT L2
ENSG00000125703 ATG4C 783245 sc-eQTL 3.45e-02 0.187 0.0881 0.374 MAIT L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 6.40e-02 -0.165 0.0885 0.374 MAIT L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 6.35e-01 0.0437 0.0918 0.374 MAIT L2
ENSG00000079739 PGM1 -26034 sc-eQTL 4.70e-01 0.0639 0.0884 0.378 NK_CD56bright L2
ENSG00000088035 ALG6 199802 sc-eQTL 2.00e-01 0.116 0.0903 0.378 NK_CD56bright L2
ENSG00000116641 DOCK7 878991 sc-eQTL 5.91e-01 0.0423 0.0785 0.378 NK_CD56bright L2
ENSG00000125703 ATG4C 783245 sc-eQTL 5.05e-01 0.0586 0.0877 0.378 NK_CD56bright L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 6.32e-01 -0.0439 0.0914 0.378 NK_CD56bright L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 1.56e-01 -0.128 0.0897 0.378 NK_CD56bright L2
ENSG00000079739 PGM1 -26034 sc-eQTL 5.95e-01 0.0367 0.0689 0.377 NK_CD56dim L2
ENSG00000088035 ALG6 199802 sc-eQTL 3.50e-01 0.0817 0.0873 0.377 NK_CD56dim L2
ENSG00000116641 DOCK7 878991 sc-eQTL 9.14e-01 -0.00822 0.0761 0.377 NK_CD56dim L2
ENSG00000125703 ATG4C 783245 sc-eQTL 1.84e-02 -0.181 0.0763 0.377 NK_CD56dim L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 1.46e-01 -0.128 0.0875 0.377 NK_CD56dim L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 9.29e-01 -0.00853 0.095 0.377 NK_CD56dim L2
ENSG00000079739 PGM1 -26034 sc-eQTL 7.13e-01 -0.0348 0.0944 0.381 NK_HLA L2
ENSG00000088035 ALG6 199802 sc-eQTL 9.07e-02 0.165 0.0973 0.381 NK_HLA L2
ENSG00000116641 DOCK7 878991 sc-eQTL 7.43e-01 -0.0245 0.0749 0.381 NK_HLA L2
ENSG00000125703 ATG4C 783245 sc-eQTL 4.00e-01 0.0733 0.087 0.381 NK_HLA L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 1.17e-01 -0.143 0.0909 0.381 NK_HLA L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 2.96e-01 0.091 0.0869 0.381 NK_HLA L2
ENSG00000079739 PGM1 -26034 sc-eQTL 4.61e-01 0.0561 0.0761 0.377 NK_cytokine L2
ENSG00000088035 ALG6 199802 sc-eQTL 6.70e-01 0.0367 0.0861 0.377 NK_cytokine L2
ENSG00000116641 DOCK7 878991 sc-eQTL 6.93e-01 0.0315 0.0797 0.377 NK_cytokine L2
ENSG00000125703 ATG4C 783245 sc-eQTL 2.05e-01 0.103 0.0813 0.377 NK_cytokine L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 1.04e-02 -0.215 0.0832 0.377 NK_cytokine L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 7.14e-01 -0.033 0.09 0.377 NK_cytokine L2
ENSG00000079739 PGM1 -26034 sc-eQTL 2.11e-01 -0.139 0.11 0.367 PB L2
ENSG00000088035 ALG6 199802 sc-eQTL 9.62e-01 0.00562 0.117 0.367 PB L2
ENSG00000116641 DOCK7 878991 sc-eQTL 8.62e-02 -0.213 0.123 0.367 PB L2
ENSG00000125703 ATG4C 783245 sc-eQTL 3.19e-01 0.108 0.108 0.367 PB L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 2.30e-01 -0.13 0.108 0.367 PB L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 1.46e-01 -0.173 0.118 0.367 PB L2
ENSG00000079739 PGM1 -26034 sc-eQTL 3.71e-01 -0.0739 0.0826 0.376 Pro_T L2
ENSG00000088035 ALG6 199802 sc-eQTL 8.27e-01 -0.0184 0.0841 0.376 Pro_T L2
ENSG00000116641 DOCK7 878991 sc-eQTL 2.91e-01 -0.0892 0.0842 0.376 Pro_T L2
ENSG00000125703 ATG4C 783245 sc-eQTL 1.17e-01 -0.116 0.0735 0.376 Pro_T L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 4.71e-02 0.147 0.0734 0.376 Pro_T L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 6.48e-01 0.0394 0.0861 0.376 Pro_T L2
ENSG00000079739 PGM1 -26034 sc-eQTL 7.60e-01 -0.0268 0.0877 0.376 Treg L2
ENSG00000088035 ALG6 199802 sc-eQTL 1.17e-01 0.147 0.0933 0.376 Treg L2
ENSG00000116641 DOCK7 878991 sc-eQTL 5.38e-01 0.053 0.086 0.376 Treg L2
ENSG00000125703 ATG4C 783245 sc-eQTL 3.82e-01 0.077 0.0878 0.376 Treg L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 3.40e-01 0.0879 0.0919 0.376 Treg L2
ENSG00000158966 CACHD1 -902752 sc-eQTL 1.79e-02 -0.164 0.0686 0.376 Treg L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 4.42e-01 -0.0677 0.088 0.376 Treg L2
ENSG00000079739 PGM1 -26034 sc-eQTL 8.63e-01 0.0152 0.0876 0.376 cDC L2
ENSG00000088035 ALG6 199802 sc-eQTL 9.25e-01 -0.00842 0.0889 0.376 cDC L2
ENSG00000116641 DOCK7 878991 sc-eQTL 9.71e-01 0.00319 0.0872 0.376 cDC L2
ENSG00000125703 ATG4C 783245 sc-eQTL 9.47e-01 -0.00502 0.0757 0.376 cDC L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 3.53e-01 -0.0891 0.0958 0.376 cDC L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 6.74e-01 -0.0325 0.0771 0.376 cDC L2
ENSG00000079739 PGM1 -26034 sc-eQTL 4.58e-01 0.0602 0.081 0.376 cMono_IL1B L2
ENSG00000088035 ALG6 199802 sc-eQTL 9.35e-01 0.00665 0.0812 0.376 cMono_IL1B L2
ENSG00000116641 DOCK7 878991 sc-eQTL 6.41e-02 -0.158 0.0849 0.376 cMono_IL1B L2
ENSG00000125703 ATG4C 783245 sc-eQTL 3.66e-01 0.0545 0.0601 0.376 cMono_IL1B L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 6.89e-04 -0.286 0.083 0.376 cMono_IL1B L2
ENSG00000079739 PGM1 -26034 sc-eQTL 9.09e-01 -0.0104 0.0907 0.376 cMono_S100A L2
ENSG00000088035 ALG6 199802 sc-eQTL 7.68e-01 -0.0271 0.0919 0.376 cMono_S100A L2
ENSG00000116641 DOCK7 878991 sc-eQTL 8.88e-01 -0.012 0.0852 0.376 cMono_S100A L2
ENSG00000125703 ATG4C 783245 sc-eQTL 5.48e-02 0.141 0.0731 0.376 cMono_S100A L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 3.60e-01 -0.0761 0.083 0.376 cMono_S100A L2
ENSG00000079739 PGM1 -26034 sc-eQTL 8.40e-01 0.0198 0.0979 0.394 gdT L2
ENSG00000088035 ALG6 199802 sc-eQTL 7.95e-01 -0.0271 0.104 0.394 gdT L2
ENSG00000116641 DOCK7 878991 sc-eQTL 6.72e-02 0.187 0.101 0.394 gdT L2
ENSG00000125703 ATG4C 783245 sc-eQTL 9.27e-01 -0.00903 0.0978 0.394 gdT L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 2.88e-01 -0.11 0.103 0.394 gdT L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 5.29e-01 0.0644 0.102 0.394 gdT L2
ENSG00000079739 PGM1 -26034 sc-eQTL 6.90e-02 0.167 0.0912 0.371 intMono L2
ENSG00000088035 ALG6 199802 sc-eQTL 1.72e-01 0.117 0.0852 0.371 intMono L2
ENSG00000116641 DOCK7 878991 sc-eQTL 7.57e-01 -0.0272 0.0874 0.371 intMono L2
ENSG00000125703 ATG4C 783245 sc-eQTL 1.88e-01 0.11 0.0831 0.371 intMono L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 4.83e-03 -0.257 0.0902 0.371 intMono L2
ENSG00000079739 PGM1 -26034 sc-eQTL 7.91e-01 0.0217 0.0817 0.376 ncMono L2
ENSG00000088035 ALG6 199802 sc-eQTL 2.12e-01 -0.112 0.0894 0.376 ncMono L2
ENSG00000116641 DOCK7 878991 sc-eQTL 1.79e-01 -0.119 0.0879 0.376 ncMono L2
ENSG00000125703 ATG4C 783245 sc-eQTL 2.19e-01 -0.101 0.0822 0.376 ncMono L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 4.72e-02 -0.171 0.0855 0.376 ncMono L2
ENSG00000079739 PGM1 -26034 sc-eQTL 7.60e-01 0.0304 0.0992 0.373 pDC L2
ENSG00000088035 ALG6 199802 sc-eQTL 1.42e-01 0.142 0.0959 0.373 pDC L2
ENSG00000116641 DOCK7 878991 sc-eQTL 9.61e-02 -0.164 0.0978 0.373 pDC L2
ENSG00000125703 ATG4C 783245 sc-eQTL 7.72e-01 -0.0257 0.0885 0.373 pDC L2
ENSG00000142856 ITGB3BP -26344 sc-eQTL 6.67e-01 -0.0428 0.0993 0.373 pDC L2
ENSG00000203965 EFCAB7 44005 sc-eQTL 9.64e-01 0.00402 0.0879 0.373 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -26034 sc-eQTL 4.08e-01 0.0699 0.0843 0.376 B_Memory LOneK1K
ENSG00000088035 ALG6 199802 sc-eQTL 6.18e-01 -0.0466 0.0933 0.376 B_Memory LOneK1K
ENSG00000116641 DOCK7 878991 sc-eQTL 4.10e-01 -0.0668 0.0809 0.376 B_Memory LOneK1K
ENSG00000125703 ATG4C 783245 sc-eQTL 2.03e-01 0.0833 0.0653 0.376 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -26344 sc-eQTL 6.22e-03 -0.234 0.0846 0.376 B_Memory LOneK1K
ENSG00000203965 EFCAB7 44005 sc-eQTL 1.98e-06 -0.416 0.085 0.376 B_Memory LOneK1K
ENSG00000079739 PGM1 -26034 sc-eQTL 1.56e-01 0.127 0.0892 0.376 B_Naive LOneK1K
ENSG00000088035 ALG6 199802 sc-eQTL 6.40e-01 0.0433 0.0923 0.376 B_Naive LOneK1K
ENSG00000116641 DOCK7 878991 sc-eQTL 9.04e-01 -0.0105 0.0862 0.376 B_Naive LOneK1K
ENSG00000125703 ATG4C 783245 sc-eQTL 9.03e-01 -0.00803 0.0658 0.376 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -26344 sc-eQTL 2.16e-06 -0.43 0.0882 0.376 B_Naive LOneK1K
ENSG00000203965 EFCAB7 44005 sc-eQTL 4.67e-02 -0.185 0.0926 0.376 B_Naive LOneK1K
ENSG00000079739 PGM1 -26034 sc-eQTL 8.34e-01 0.0174 0.083 0.376 CD14_Mono LOneK1K
ENSG00000088035 ALG6 199802 sc-eQTL 8.80e-01 -0.0121 0.0803 0.376 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 878991 sc-eQTL 6.84e-02 -0.147 0.0803 0.376 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 783245 sc-eQTL 4.53e-02 0.112 0.0554 0.376 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -26344 sc-eQTL 5.14e-03 -0.23 0.0812 0.376 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -26034 sc-eQTL 7.22e-02 0.142 0.0786 0.375 CD16_Mono LOneK1K
ENSG00000088035 ALG6 199802 sc-eQTL 5.98e-01 0.0475 0.0899 0.375 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 878991 sc-eQTL 2.92e-01 -0.0938 0.0887 0.375 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 783245 sc-eQTL 3.13e-01 -0.0766 0.0757 0.375 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -26344 sc-eQTL 9.78e-04 -0.287 0.0858 0.375 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -26034 sc-eQTL 6.85e-01 0.0275 0.0677 0.377 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 199802 sc-eQTL 9.44e-02 0.136 0.0808 0.377 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 878991 sc-eQTL 6.37e-01 0.0344 0.0728 0.377 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 783245 sc-eQTL 9.30e-01 -0.00637 0.0727 0.377 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -26344 sc-eQTL 2.87e-03 -0.255 0.0844 0.377 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 44005 sc-eQTL 8.49e-01 -0.0181 0.0952 0.377 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -26034 eQTL 2.7e-12 0.128 0.0181 0.0 0.0 0.366
ENSG00000088035 ALG6 199802 eQTL 0.00189 0.0427 0.0137 0.0 0.0 0.366
ENSG00000116652 DLEU2L 20295 eQTL 0.00733 -0.0721 0.0268 0.00133 0.0 0.366
ENSG00000185483 ROR1 -206640 pQTL 0.0271 0.0306 0.0138 0.0 0.0 0.364
ENSG00000203965 EFCAB7 44005 eQTL 1.14e-04 -0.0958 0.0247 0.0 0.0 0.366
ENSG00000230798 FOXD3-AS1 242936 eQTL 0.0181 0.0639 0.027 0.0 0.0 0.366

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -26034 1.45e-05 1.52e-05 2.57e-06 8.58e-06 2.32e-06 6.28e-06 1.84e-05 2.13e-06 1.27e-05 6.67e-06 1.85e-05 6.86e-06 2.46e-05 5.28e-06 4.27e-06 8.62e-06 7.67e-06 1.17e-05 3.54e-06 3.15e-06 6.92e-06 1.26e-05 1.31e-05 3.99e-06 2.41e-05 4.6e-06 7.44e-06 5.26e-06 1.45e-05 1.33e-05 1.01e-05 9.78e-07 1.29e-06 3.78e-06 5.89e-06 2.85e-06 1.79e-06 2.33e-06 2.08e-06 1.4e-06 9.63e-07 1.89e-05 2.39e-06 1.67e-07 8.66e-07 2.2e-06 2.21e-06 7.18e-07 4.73e-07
ENSG00000088035 ALG6 199802 3.68e-06 2.75e-06 2.86e-07 1.74e-06 4.65e-07 8.16e-07 1.78e-06 4.75e-07 1.72e-06 7.7e-07 2.51e-06 1.42e-06 3.27e-06 1.43e-06 5.74e-07 1.15e-06 1.18e-06 1.9e-06 6.68e-07 7.62e-07 7.78e-07 2.19e-06 2.23e-06 9.74e-07 3.61e-06 1.1e-06 1.21e-06 1.07e-06 1.91e-06 1.83e-06 1.82e-06 2.78e-07 3.84e-07 9.68e-07 1.02e-06 6.59e-07 7.12e-07 4.03e-07 6.98e-07 2.29e-07 2.72e-07 3.29e-06 5.2e-07 1.3e-07 3.79e-07 3.46e-07 3.93e-07 2.71e-07 2.75e-07