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Genes within 1Mb (chr1:63540858:GT:G):

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Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -52553 sc-eQTL 1.21e-01 0.113 0.0727 0.41 B L1
ENSG00000088035 ALG6 173283 sc-eQTL 7.39e-01 0.0253 0.0758 0.41 B L1
ENSG00000116641 DOCK7 852472 sc-eQTL 4.39e-01 -0.0586 0.0757 0.41 B L1
ENSG00000125703 ATG4C 756726 sc-eQTL 3.73e-01 -0.0469 0.0526 0.41 B L1
ENSG00000142856 ITGB3BP -52863 sc-eQTL 6.04e-07 -0.407 0.079 0.41 B L1
ENSG00000203965 EFCAB7 17486 sc-eQTL 7.82e-05 -0.333 0.0828 0.41 B L1
ENSG00000079739 PGM1 -52553 sc-eQTL 2.75e-01 0.0687 0.0628 0.41 CD4T L1
ENSG00000088035 ALG6 173283 sc-eQTL 3.78e-01 0.0612 0.0693 0.41 CD4T L1
ENSG00000116641 DOCK7 852472 sc-eQTL 7.41e-01 -0.0232 0.0703 0.41 CD4T L1
ENSG00000125703 ATG4C 756726 sc-eQTL 7.61e-01 0.0173 0.0568 0.41 CD4T L1
ENSG00000142856 ITGB3BP -52863 sc-eQTL 4.19e-08 -0.427 0.075 0.41 CD4T L1
ENSG00000158966 CACHD1 -929271 sc-eQTL 1.73e-01 0.0654 0.0479 0.41 CD4T L1
ENSG00000203965 EFCAB7 17486 sc-eQTL 2.45e-03 -0.217 0.0708 0.41 CD4T L1
ENSG00000079739 PGM1 -52553 sc-eQTL 9.00e-01 -0.00872 0.0696 0.41 CD8T L1
ENSG00000088035 ALG6 173283 sc-eQTL 9.47e-01 0.0051 0.0767 0.41 CD8T L1
ENSG00000116641 DOCK7 852472 sc-eQTL 6.89e-01 -0.0311 0.0777 0.41 CD8T L1
ENSG00000125703 ATG4C 756726 sc-eQTL 8.08e-01 0.0179 0.0738 0.41 CD8T L1
ENSG00000142856 ITGB3BP -52863 sc-eQTL 6.63e-09 -0.461 0.0762 0.41 CD8T L1
ENSG00000158966 CACHD1 -929271 sc-eQTL 2.22e-01 0.0509 0.0416 0.41 CD8T L1
ENSG00000203965 EFCAB7 17486 sc-eQTL 1.84e-04 -0.303 0.0796 0.41 CD8T L1
ENSG00000079739 PGM1 -52553 sc-eQTL 2.70e-01 0.0847 0.0765 0.41 DC L1
ENSG00000088035 ALG6 173283 sc-eQTL 2.18e-01 0.0976 0.0789 0.41 DC L1
ENSG00000116641 DOCK7 852472 sc-eQTL 9.21e-01 0.00811 0.0812 0.41 DC L1
ENSG00000125703 ATG4C 756726 sc-eQTL 5.82e-01 -0.035 0.0635 0.41 DC L1
ENSG00000142856 ITGB3BP -52863 sc-eQTL 7.41e-01 -0.0294 0.0888 0.41 DC L1
ENSG00000203965 EFCAB7 17486 sc-eQTL 1.93e-01 -0.101 0.077 0.41 DC L1
ENSG00000079739 PGM1 -52553 sc-eQTL 5.55e-01 0.0446 0.0754 0.41 Mono L1
ENSG00000088035 ALG6 173283 sc-eQTL 6.01e-01 0.0412 0.0787 0.41 Mono L1
ENSG00000116641 DOCK7 852472 sc-eQTL 1.15e-01 -0.12 0.0757 0.41 Mono L1
ENSG00000125703 ATG4C 756726 sc-eQTL 4.40e-01 0.0398 0.0514 0.41 Mono L1
ENSG00000142856 ITGB3BP -52863 sc-eQTL 4.65e-04 -0.281 0.079 0.41 Mono L1
ENSG00000079739 PGM1 -52553 sc-eQTL 6.24e-01 0.0315 0.0641 0.41 NK L1
ENSG00000088035 ALG6 173283 sc-eQTL 1.47e-01 0.109 0.0749 0.41 NK L1
ENSG00000116641 DOCK7 852472 sc-eQTL 4.41e-01 0.0478 0.0619 0.41 NK L1
ENSG00000125703 ATG4C 756726 sc-eQTL 6.90e-01 -0.0266 0.0665 0.41 NK L1
ENSG00000142856 ITGB3BP -52863 sc-eQTL 9.51e-04 -0.27 0.0806 0.41 NK L1
ENSG00000203965 EFCAB7 17486 sc-eQTL 3.16e-01 -0.0901 0.0896 0.41 NK L1
ENSG00000079739 PGM1 -52553 sc-eQTL 3.25e-01 -0.0723 0.0733 0.41 Other_T L1
ENSG00000088035 ALG6 173283 sc-eQTL 7.24e-01 -0.0261 0.0738 0.41 Other_T L1
ENSG00000116641 DOCK7 852472 sc-eQTL 7.70e-01 0.022 0.0754 0.41 Other_T L1
ENSG00000125703 ATG4C 756726 sc-eQTL 2.46e-02 0.146 0.0645 0.41 Other_T L1
ENSG00000142856 ITGB3BP -52863 sc-eQTL 2.67e-02 -0.128 0.0572 0.41 Other_T L1
ENSG00000203965 EFCAB7 17486 sc-eQTL 2.87e-01 -0.0951 0.089 0.41 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -52553 sc-eQTL 3.72e-01 0.0887 0.0991 0.411 B_Activated L2
ENSG00000088035 ALG6 173283 sc-eQTL 1.65e-01 0.132 0.0946 0.411 B_Activated L2
ENSG00000116641 DOCK7 852472 sc-eQTL 4.07e-01 0.0735 0.0884 0.411 B_Activated L2
ENSG00000125703 ATG4C 756726 sc-eQTL 5.73e-01 0.0526 0.0931 0.411 B_Activated L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 7.34e-02 -0.162 0.0902 0.411 B_Activated L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 2.79e-01 -0.0933 0.0859 0.411 B_Activated L2
ENSG00000079739 PGM1 -52553 sc-eQTL 2.80e-01 0.0934 0.0863 0.412 B_Intermediate L2
ENSG00000088035 ALG6 173283 sc-eQTL 2.98e-01 -0.0914 0.0876 0.412 B_Intermediate L2
ENSG00000116641 DOCK7 852472 sc-eQTL 6.86e-01 0.0339 0.0839 0.412 B_Intermediate L2
ENSG00000125703 ATG4C 756726 sc-eQTL 1.01e-01 0.116 0.0706 0.412 B_Intermediate L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 1.03e-02 -0.216 0.0833 0.412 B_Intermediate L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 1.13e-03 -0.27 0.0817 0.412 B_Intermediate L2
ENSG00000079739 PGM1 -52553 sc-eQTL 9.39e-01 -0.00653 0.0855 0.409 B_Memory L2
ENSG00000088035 ALG6 173283 sc-eQTL 5.43e-01 0.0529 0.0868 0.409 B_Memory L2
ENSG00000116641 DOCK7 852472 sc-eQTL 1.13e-01 -0.129 0.081 0.409 B_Memory L2
ENSG00000125703 ATG4C 756726 sc-eQTL 8.70e-01 -0.0127 0.0775 0.409 B_Memory L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 1.28e-01 -0.135 0.0882 0.409 B_Memory L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 3.01e-02 -0.19 0.087 0.409 B_Memory L2
ENSG00000079739 PGM1 -52553 sc-eQTL 1.55e-01 0.124 0.0866 0.41 B_Naive1 L2
ENSG00000088035 ALG6 173283 sc-eQTL 8.77e-01 -0.0135 0.0874 0.41 B_Naive1 L2
ENSG00000116641 DOCK7 852472 sc-eQTL 8.31e-01 0.0179 0.0837 0.41 B_Naive1 L2
ENSG00000125703 ATG4C 756726 sc-eQTL 8.71e-01 -0.0105 0.0645 0.41 B_Naive1 L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 9.11e-06 -0.371 0.0817 0.41 B_Naive1 L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 1.94e-03 -0.28 0.0893 0.41 B_Naive1 L2
ENSG00000079739 PGM1 -52553 sc-eQTL 4.24e-01 0.0688 0.086 0.41 B_Naive2 L2
ENSG00000088035 ALG6 173283 sc-eQTL 4.58e-01 0.0667 0.0897 0.41 B_Naive2 L2
ENSG00000116641 DOCK7 852472 sc-eQTL 9.98e-01 -0.000232 0.0864 0.41 B_Naive2 L2
ENSG00000125703 ATG4C 756726 sc-eQTL 2.30e-01 -0.0997 0.0828 0.41 B_Naive2 L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 5.54e-06 -0.4 0.0858 0.41 B_Naive2 L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 1.81e-01 0.12 0.0893 0.41 B_Naive2 L2
ENSG00000079739 PGM1 -52553 sc-eQTL 7.66e-01 -0.0257 0.0863 0.407 CD4_CTL L2
ENSG00000088035 ALG6 173283 sc-eQTL 5.79e-01 -0.0507 0.0912 0.407 CD4_CTL L2
ENSG00000116641 DOCK7 852472 sc-eQTL 3.87e-01 0.069 0.0796 0.407 CD4_CTL L2
ENSG00000125703 ATG4C 756726 sc-eQTL 8.46e-01 0.016 0.0825 0.407 CD4_CTL L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 4.66e-01 -0.0644 0.0881 0.407 CD4_CTL L2
ENSG00000158966 CACHD1 -929271 sc-eQTL 8.62e-01 -0.00556 0.0321 0.407 CD4_CTL L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 8.52e-01 0.0157 0.0839 0.407 CD4_CTL L2
ENSG00000079739 PGM1 -52553 sc-eQTL 2.45e-01 0.0818 0.0702 0.41 CD4_Naive L2
ENSG00000088035 ALG6 173283 sc-eQTL 4.43e-01 0.0587 0.0764 0.41 CD4_Naive L2
ENSG00000116641 DOCK7 852472 sc-eQTL 9.08e-01 -0.00868 0.0752 0.41 CD4_Naive L2
ENSG00000125703 ATG4C 756726 sc-eQTL 6.75e-01 0.0279 0.0664 0.41 CD4_Naive L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 1.75e-07 -0.411 0.0761 0.41 CD4_Naive L2
ENSG00000158966 CACHD1 -929271 sc-eQTL 1.99e-01 0.0617 0.0479 0.41 CD4_Naive L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 2.55e-02 -0.179 0.0797 0.41 CD4_Naive L2
ENSG00000079739 PGM1 -52553 sc-eQTL 9.26e-01 -0.00685 0.0737 0.41 CD4_TCM L2
ENSG00000088035 ALG6 173283 sc-eQTL 9.27e-01 0.00782 0.0856 0.41 CD4_TCM L2
ENSG00000116641 DOCK7 852472 sc-eQTL 1.33e-01 -0.114 0.0754 0.41 CD4_TCM L2
ENSG00000125703 ATG4C 756726 sc-eQTL 1.46e-01 -0.107 0.0735 0.41 CD4_TCM L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 2.26e-04 -0.316 0.0843 0.41 CD4_TCM L2
ENSG00000158966 CACHD1 -929271 sc-eQTL 1.66e-01 0.0955 0.0687 0.41 CD4_TCM L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 3.40e-03 -0.245 0.0825 0.41 CD4_TCM L2
ENSG00000079739 PGM1 -52553 sc-eQTL 6.33e-03 0.234 0.0848 0.41 CD4_TEM L2
ENSG00000088035 ALG6 173283 sc-eQTL 7.67e-01 0.0258 0.0868 0.41 CD4_TEM L2
ENSG00000116641 DOCK7 852472 sc-eQTL 7.77e-01 0.024 0.0846 0.41 CD4_TEM L2
ENSG00000125703 ATG4C 756726 sc-eQTL 2.29e-01 0.0987 0.0819 0.41 CD4_TEM L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 7.59e-03 -0.225 0.0834 0.41 CD4_TEM L2
ENSG00000158966 CACHD1 -929271 sc-eQTL 6.28e-01 0.0254 0.0524 0.41 CD4_TEM L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 1.63e-01 -0.123 0.0875 0.41 CD4_TEM L2
ENSG00000079739 PGM1 -52553 sc-eQTL 9.78e-01 0.00214 0.0789 0.41 CD8_CTL L2
ENSG00000088035 ALG6 173283 sc-eQTL 5.83e-01 -0.0461 0.0838 0.41 CD8_CTL L2
ENSG00000116641 DOCK7 852472 sc-eQTL 5.19e-01 -0.0514 0.0796 0.41 CD8_CTL L2
ENSG00000125703 ATG4C 756726 sc-eQTL 7.48e-02 0.151 0.0841 0.41 CD8_CTL L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 2.63e-02 -0.195 0.0871 0.41 CD8_CTL L2
ENSG00000158966 CACHD1 -929271 sc-eQTL 5.24e-01 -0.0238 0.0373 0.41 CD8_CTL L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 2.08e-01 -0.114 0.0899 0.41 CD8_CTL L2
ENSG00000079739 PGM1 -52553 sc-eQTL 2.40e-01 0.0942 0.0798 0.41 CD8_Naive L2
ENSG00000088035 ALG6 173283 sc-eQTL 6.98e-01 0.0323 0.0829 0.41 CD8_Naive L2
ENSG00000116641 DOCK7 852472 sc-eQTL 8.12e-01 -0.0204 0.0857 0.41 CD8_Naive L2
ENSG00000125703 ATG4C 756726 sc-eQTL 6.31e-01 -0.0395 0.0822 0.41 CD8_Naive L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 1.84e-07 -0.421 0.0781 0.41 CD8_Naive L2
ENSG00000158966 CACHD1 -929271 sc-eQTL 6.19e-01 0.0288 0.0577 0.41 CD8_Naive L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 4.25e-02 -0.159 0.0778 0.41 CD8_Naive L2
ENSG00000079739 PGM1 -52553 sc-eQTL 8.95e-01 -0.0115 0.0869 0.412 CD8_TCM L2
ENSG00000088035 ALG6 173283 sc-eQTL 8.34e-01 -0.0184 0.088 0.412 CD8_TCM L2
ENSG00000116641 DOCK7 852472 sc-eQTL 7.74e-01 -0.0247 0.0859 0.412 CD8_TCM L2
ENSG00000125703 ATG4C 756726 sc-eQTL 4.28e-01 -0.0697 0.0877 0.412 CD8_TCM L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 1.80e-01 -0.114 0.085 0.412 CD8_TCM L2
ENSG00000158966 CACHD1 -929271 sc-eQTL 6.70e-01 0.0191 0.0448 0.412 CD8_TCM L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 1.73e-01 -0.118 0.0866 0.412 CD8_TCM L2
ENSG00000079739 PGM1 -52553 sc-eQTL 1.07e-01 -0.144 0.0892 0.397 CD8_TEM L2
ENSG00000088035 ALG6 173283 sc-eQTL 6.95e-01 0.0354 0.0901 0.397 CD8_TEM L2
ENSG00000116641 DOCK7 852472 sc-eQTL 3.49e-01 -0.0819 0.0872 0.397 CD8_TEM L2
ENSG00000125703 ATG4C 756726 sc-eQTL 8.86e-02 0.143 0.0834 0.397 CD8_TEM L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 4.76e-02 -0.179 0.09 0.397 CD8_TEM L2
ENSG00000158966 CACHD1 -929271 sc-eQTL 8.81e-01 0.00278 0.0185 0.397 CD8_TEM L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 4.83e-02 -0.174 0.0873 0.397 CD8_TEM L2
ENSG00000079739 PGM1 -52553 sc-eQTL 5.16e-01 -0.0557 0.0857 0.409 MAIT L2
ENSG00000088035 ALG6 173283 sc-eQTL 4.82e-01 -0.0598 0.0848 0.409 MAIT L2
ENSG00000116641 DOCK7 852472 sc-eQTL 9.11e-01 0.00907 0.0814 0.409 MAIT L2
ENSG00000125703 ATG4C 756726 sc-eQTL 6.52e-02 0.158 0.0851 0.409 MAIT L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 1.08e-02 -0.218 0.0846 0.409 MAIT L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 6.69e-01 -0.0379 0.0885 0.409 MAIT L2
ENSG00000079739 PGM1 -52553 sc-eQTL 7.11e-01 0.0316 0.0851 0.409 NK_CD56bright L2
ENSG00000088035 ALG6 173283 sc-eQTL 8.77e-02 0.149 0.0867 0.409 NK_CD56bright L2
ENSG00000116641 DOCK7 852472 sc-eQTL 5.16e-01 0.0491 0.0756 0.409 NK_CD56bright L2
ENSG00000125703 ATG4C 756726 sc-eQTL 9.65e-01 0.00371 0.0845 0.409 NK_CD56bright L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 6.84e-01 -0.0358 0.0879 0.409 NK_CD56bright L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 1.67e-01 -0.12 0.0864 0.409 NK_CD56bright L2
ENSG00000079739 PGM1 -52553 sc-eQTL 7.82e-01 0.0184 0.0664 0.409 NK_CD56dim L2
ENSG00000088035 ALG6 173283 sc-eQTL 7.67e-01 0.025 0.0842 0.409 NK_CD56dim L2
ENSG00000116641 DOCK7 852472 sc-eQTL 8.24e-01 -0.0163 0.0733 0.409 NK_CD56dim L2
ENSG00000125703 ATG4C 756726 sc-eQTL 1.27e-02 -0.184 0.0734 0.409 NK_CD56dim L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 2.13e-01 -0.106 0.0844 0.409 NK_CD56dim L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 6.08e-01 -0.047 0.0915 0.409 NK_CD56dim L2
ENSG00000079739 PGM1 -52553 sc-eQTL 9.08e-01 -0.0105 0.091 0.413 NK_HLA L2
ENSG00000088035 ALG6 173283 sc-eQTL 2.96e-01 0.0986 0.0941 0.413 NK_HLA L2
ENSG00000116641 DOCK7 852472 sc-eQTL 7.47e-01 -0.0234 0.0722 0.413 NK_HLA L2
ENSG00000125703 ATG4C 756726 sc-eQTL 7.94e-01 0.0219 0.0839 0.413 NK_HLA L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 7.96e-02 -0.154 0.0875 0.413 NK_HLA L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 3.71e-01 0.0752 0.0838 0.413 NK_HLA L2
ENSG00000079739 PGM1 -52553 sc-eQTL 4.08e-01 0.0606 0.073 0.409 NK_cytokine L2
ENSG00000088035 ALG6 173283 sc-eQTL 8.48e-01 0.0159 0.0827 0.409 NK_cytokine L2
ENSG00000116641 DOCK7 852472 sc-eQTL 8.19e-01 0.0176 0.0766 0.409 NK_cytokine L2
ENSG00000125703 ATG4C 756726 sc-eQTL 1.17e-01 0.123 0.0779 0.409 NK_cytokine L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 2.09e-03 -0.247 0.0793 0.409 NK_cytokine L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 8.63e-01 -0.015 0.0865 0.409 NK_cytokine L2
ENSG00000079739 PGM1 -52553 sc-eQTL 3.46e-01 -0.102 0.108 0.404 PB L2
ENSG00000088035 ALG6 173283 sc-eQTL 9.67e-01 0.00467 0.113 0.404 PB L2
ENSG00000116641 DOCK7 852472 sc-eQTL 1.70e-01 -0.166 0.12 0.404 PB L2
ENSG00000125703 ATG4C 756726 sc-eQTL 5.97e-01 0.056 0.106 0.404 PB L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 1.35e-01 -0.157 0.104 0.404 PB L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 1.60e-01 -0.163 0.115 0.404 PB L2
ENSG00000079739 PGM1 -52553 sc-eQTL 3.06e-01 -0.0818 0.0797 0.409 Pro_T L2
ENSG00000088035 ALG6 173283 sc-eQTL 8.08e-01 -0.0198 0.0813 0.409 Pro_T L2
ENSG00000116641 DOCK7 852472 sc-eQTL 2.92e-01 -0.086 0.0814 0.409 Pro_T L2
ENSG00000125703 ATG4C 756726 sc-eQTL 3.06e-01 -0.073 0.0712 0.409 Pro_T L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 9.03e-02 0.121 0.0712 0.409 Pro_T L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 8.83e-01 0.0123 0.0832 0.409 Pro_T L2
ENSG00000079739 PGM1 -52553 sc-eQTL 7.73e-01 -0.0244 0.0842 0.41 Treg L2
ENSG00000088035 ALG6 173283 sc-eQTL 2.10e-01 0.113 0.0897 0.41 Treg L2
ENSG00000116641 DOCK7 852472 sc-eQTL 7.13e-01 0.0305 0.0826 0.41 Treg L2
ENSG00000125703 ATG4C 756726 sc-eQTL 7.22e-01 0.0301 0.0845 0.41 Treg L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 6.42e-01 0.0411 0.0883 0.41 Treg L2
ENSG00000158966 CACHD1 -929271 sc-eQTL 3.65e-02 -0.139 0.0661 0.41 Treg L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 7.18e-01 -0.0305 0.0845 0.41 Treg L2
ENSG00000079739 PGM1 -52553 sc-eQTL 8.13e-01 0.0198 0.0836 0.407 cDC L2
ENSG00000088035 ALG6 173283 sc-eQTL 4.62e-01 -0.0624 0.0846 0.407 cDC L2
ENSG00000116641 DOCK7 852472 sc-eQTL 6.61e-01 0.0365 0.0831 0.407 cDC L2
ENSG00000125703 ATG4C 756726 sc-eQTL 5.67e-01 -0.0413 0.0722 0.407 cDC L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 4.82e-01 -0.0645 0.0914 0.407 cDC L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 4.49e-01 -0.0557 0.0734 0.407 cDC L2
ENSG00000079739 PGM1 -52553 sc-eQTL 2.72e-01 0.086 0.0781 0.41 cMono_IL1B L2
ENSG00000088035 ALG6 173283 sc-eQTL 7.19e-01 0.0282 0.0784 0.41 cMono_IL1B L2
ENSG00000116641 DOCK7 852472 sc-eQTL 5.97e-02 -0.155 0.082 0.41 cMono_IL1B L2
ENSG00000125703 ATG4C 756726 sc-eQTL 9.56e-01 0.00324 0.0581 0.41 cMono_IL1B L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 5.69e-05 -0.326 0.0793 0.41 cMono_IL1B L2
ENSG00000079739 PGM1 -52553 sc-eQTL 8.68e-01 0.0145 0.0872 0.41 cMono_S100A L2
ENSG00000088035 ALG6 173283 sc-eQTL 6.69e-01 -0.0378 0.0883 0.41 cMono_S100A L2
ENSG00000116641 DOCK7 852472 sc-eQTL 8.59e-01 0.0146 0.0819 0.41 cMono_S100A L2
ENSG00000125703 ATG4C 756726 sc-eQTL 6.42e-02 0.131 0.0704 0.41 cMono_S100A L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 3.89e-01 -0.0689 0.0799 0.41 cMono_S100A L2
ENSG00000079739 PGM1 -52553 sc-eQTL 5.67e-01 0.0546 0.0951 0.421 gdT L2
ENSG00000088035 ALG6 173283 sc-eQTL 9.58e-01 0.00531 0.102 0.421 gdT L2
ENSG00000116641 DOCK7 852472 sc-eQTL 1.01e-01 0.163 0.0987 0.421 gdT L2
ENSG00000125703 ATG4C 756726 sc-eQTL 4.95e-01 0.065 0.095 0.421 gdT L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 1.20e-01 -0.157 0.1 0.421 gdT L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 5.48e-01 0.0597 0.0993 0.421 gdT L2
ENSG00000079739 PGM1 -52553 sc-eQTL 6.60e-02 0.162 0.0877 0.407 intMono L2
ENSG00000088035 ALG6 173283 sc-eQTL 3.76e-01 0.0729 0.0822 0.407 intMono L2
ENSG00000116641 DOCK7 852472 sc-eQTL 7.57e-01 0.0261 0.0841 0.407 intMono L2
ENSG00000125703 ATG4C 756726 sc-eQTL 3.12e-01 0.0812 0.0801 0.407 intMono L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 6.71e-03 -0.238 0.0869 0.407 intMono L2
ENSG00000079739 PGM1 -52553 sc-eQTL 9.62e-01 -0.00375 0.0781 0.41 ncMono L2
ENSG00000088035 ALG6 173283 sc-eQTL 2.37e-01 -0.101 0.0856 0.41 ncMono L2
ENSG00000116641 DOCK7 852472 sc-eQTL 2.43e-01 -0.0985 0.0842 0.41 ncMono L2
ENSG00000125703 ATG4C 756726 sc-eQTL 1.61e-01 -0.11 0.0785 0.41 ncMono L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 1.59e-01 -0.116 0.0821 0.41 ncMono L2
ENSG00000079739 PGM1 -52553 sc-eQTL 8.36e-01 -0.0199 0.0957 0.41 pDC L2
ENSG00000088035 ALG6 173283 sc-eQTL 3.27e-01 0.0915 0.0929 0.41 pDC L2
ENSG00000116641 DOCK7 852472 sc-eQTL 1.21e-01 -0.147 0.0945 0.41 pDC L2
ENSG00000125703 ATG4C 756726 sc-eQTL 9.97e-01 0.000342 0.0854 0.41 pDC L2
ENSG00000142856 ITGB3BP -52863 sc-eQTL 8.18e-01 -0.0221 0.0959 0.41 pDC L2
ENSG00000203965 EFCAB7 17486 sc-eQTL 7.74e-01 -0.0244 0.0849 0.41 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -52553 sc-eQTL 5.35e-01 0.0505 0.0812 0.41 B_Memory LOneK1K
ENSG00000088035 ALG6 173283 sc-eQTL 5.91e-01 -0.0483 0.0898 0.41 B_Memory LOneK1K
ENSG00000116641 DOCK7 852472 sc-eQTL 5.35e-01 -0.0484 0.0779 0.41 B_Memory LOneK1K
ENSG00000125703 ATG4C 756726 sc-eQTL 1.84e-01 0.0837 0.0628 0.41 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -52863 sc-eQTL 4.90e-03 -0.231 0.0813 0.41 B_Memory LOneK1K
ENSG00000203965 EFCAB7 17486 sc-eQTL 5.93e-06 -0.382 0.0822 0.41 B_Memory LOneK1K
ENSG00000079739 PGM1 -52553 sc-eQTL 1.17e-01 0.133 0.0845 0.41 B_Naive LOneK1K
ENSG00000088035 ALG6 173283 sc-eQTL 8.42e-01 0.0174 0.0875 0.41 B_Naive LOneK1K
ENSG00000116641 DOCK7 852472 sc-eQTL 9.62e-01 0.00389 0.0817 0.41 B_Naive LOneK1K
ENSG00000125703 ATG4C 756726 sc-eQTL 2.38e-01 -0.0735 0.0621 0.41 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -52863 sc-eQTL 2.33e-07 -0.442 0.0827 0.41 B_Naive LOneK1K
ENSG00000203965 EFCAB7 17486 sc-eQTL 8.61e-02 -0.152 0.088 0.41 B_Naive LOneK1K
ENSG00000079739 PGM1 -52553 sc-eQTL 5.48e-01 0.0482 0.0801 0.41 CD14_Mono LOneK1K
ENSG00000088035 ALG6 173283 sc-eQTL 9.67e-01 0.00318 0.0776 0.41 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 852472 sc-eQTL 1.00e-01 -0.128 0.0776 0.41 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 756726 sc-eQTL 2.24e-01 0.0656 0.0538 0.41 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -52863 sc-eQTL 1.39e-03 -0.253 0.078 0.41 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -52553 sc-eQTL 1.82e-01 0.102 0.0759 0.409 CD16_Mono LOneK1K
ENSG00000088035 ALG6 173283 sc-eQTL 8.70e-01 0.0142 0.0866 0.409 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 852472 sc-eQTL 5.08e-01 -0.0568 0.0856 0.409 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 756726 sc-eQTL 2.11e-01 -0.0913 0.0728 0.409 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -52863 sc-eQTL 4.83e-03 -0.237 0.0832 0.409 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -52553 sc-eQTL 6.95e-01 0.0256 0.065 0.409 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 173283 sc-eQTL 4.33e-01 0.0613 0.078 0.409 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 852472 sc-eQTL 6.85e-01 0.0284 0.07 0.409 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 756726 sc-eQTL 7.81e-01 -0.0195 0.0699 0.409 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -52863 sc-eQTL 1.25e-03 -0.264 0.0808 0.409 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 17486 sc-eQTL 7.34e-01 -0.0311 0.0914 0.409 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -52553 eQTL 1.25e-14 0.135 0.0172 0.0138 0.0139 0.419
ENSG00000088035 ALG6 173283 eQTL 5.97e-06 0.0594 0.013 0.0 0.0 0.419
ENSG00000116641 DOCK7 852490 eQTL 0.0127 -0.0547 0.0219 0.0 0.0 0.419
ENSG00000116652 DLEU2L -6224 eQTL 0.000714 -0.087 0.0256 0.00451 0.00423 0.419
ENSG00000185483 ROR1 -233159 pQTL 0.0105 0.034 0.0133 0.00149 0.0 0.418
ENSG00000203965 EFCAB7 17486 eQTL 2.22e-07 -0.123 0.0235 0.00804 0.00804 0.419
ENSG00000230798 FOXD3-AS1 216417 eQTL 0.0196 0.0604 0.0258 0.0 0.0 0.419

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -52553 6.23e-05 3.46e-05 5.99e-06 1.49e-05 5.54e-06 1.12e-05 4.66e-05 3.66e-06 2.12e-05 9.71e-06 3.92e-05 1.2e-05 3.98e-05 1.38e-05 5.45e-06 1.64e-05 1.07e-05 2.28e-05 7.56e-06 4.92e-06 1.32e-05 2.79e-05 3.11e-05 8.82e-06 4.66e-05 5.96e-06 1.19e-05 9.09e-06 2.61e-05 2.06e-05 1.73e-05 1.58e-06 1.38e-06 5.37e-06 1.11e-05 4.27e-06 2.05e-06 2.71e-06 2.95e-06 1.45e-06 1.67e-06 4.15e-05 4.89e-06 4.33e-07 2.63e-06 3.41e-06 3.64e-06 8.83e-07 6.66e-07
ENSG00000088035 ALG6 173283 5.52e-06 5.09e-06 1.23e-06 5.08e-06 1.5e-06 2.21e-06 8.56e-06 9.98e-07 4.96e-06 1.97e-06 9.01e-06 3.21e-06 7.57e-06 1.75e-06 1.33e-06 2.98e-06 1.82e-06 3.95e-06 1.58e-06 1.41e-06 4.21e-06 4.86e-06 4.42e-06 1.99e-06 9.13e-06 1.65e-06 2.25e-06 1.72e-06 5.8e-06 4.25e-06 3.37e-06 4.56e-07 3.49e-07 2.27e-06 3.09e-06 1.22e-06 1.2e-06 4.74e-07 1.23e-06 2.8e-07 2.71e-07 8.35e-06 2.72e-06 4.33e-07 7.71e-07 1.08e-06 8e-07 2.23e-07 1.53e-07