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Genes within 1Mb (chr1:63540137:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -53274 sc-eQTL 2.04e-01 0.097 0.0761 0.382 B L1
ENSG00000088035 ALG6 172562 sc-eQTL 9.03e-01 0.0097 0.0792 0.382 B L1
ENSG00000116641 DOCK7 851751 sc-eQTL 3.52e-01 -0.0737 0.079 0.382 B L1
ENSG00000125703 ATG4C 756005 sc-eQTL 9.96e-01 0.00028 0.055 0.382 B L1
ENSG00000142856 ITGB3BP -53584 sc-eQTL 4.37e-07 -0.43 0.0824 0.382 B L1
ENSG00000203965 EFCAB7 16765 sc-eQTL 2.73e-05 -0.369 0.086 0.382 B L1
ENSG00000079739 PGM1 -53274 sc-eQTL 3.56e-01 0.0601 0.0649 0.382 CD4T L1
ENSG00000088035 ALG6 172562 sc-eQTL 8.10e-01 0.0173 0.0718 0.382 CD4T L1
ENSG00000116641 DOCK7 851751 sc-eQTL 9.24e-01 -0.00697 0.0727 0.382 CD4T L1
ENSG00000125703 ATG4C 756005 sc-eQTL 5.46e-01 0.0355 0.0586 0.382 CD4T L1
ENSG00000142856 ITGB3BP -53584 sc-eQTL 4.12e-06 -0.375 0.0792 0.382 CD4T L1
ENSG00000158966 CACHD1 -929992 sc-eQTL 1.64e-01 0.0691 0.0495 0.382 CD4T L1
ENSG00000203965 EFCAB7 16765 sc-eQTL 1.79e-03 -0.231 0.0731 0.382 CD4T L1
ENSG00000079739 PGM1 -53274 sc-eQTL 9.24e-01 -0.00686 0.0718 0.382 CD8T L1
ENSG00000088035 ALG6 172562 sc-eQTL 5.22e-01 -0.0508 0.0791 0.382 CD8T L1
ENSG00000116641 DOCK7 851751 sc-eQTL 9.97e-01 0.000263 0.0802 0.382 CD8T L1
ENSG00000125703 ATG4C 756005 sc-eQTL 2.20e-01 0.0935 0.0759 0.382 CD8T L1
ENSG00000142856 ITGB3BP -53584 sc-eQTL 1.21e-06 -0.403 0.0806 0.382 CD8T L1
ENSG00000158966 CACHD1 -929992 sc-eQTL 3.75e-01 0.0382 0.043 0.382 CD8T L1
ENSG00000203965 EFCAB7 16765 sc-eQTL 7.28e-04 -0.283 0.0827 0.382 CD8T L1
ENSG00000079739 PGM1 -53274 sc-eQTL 4.45e-01 0.0621 0.0812 0.378 DC L1
ENSG00000088035 ALG6 172562 sc-eQTL 6.99e-02 0.152 0.0832 0.378 DC L1
ENSG00000116641 DOCK7 851751 sc-eQTL 6.66e-01 -0.0371 0.0859 0.378 DC L1
ENSG00000125703 ATG4C 756005 sc-eQTL 6.70e-01 -0.0287 0.0673 0.378 DC L1
ENSG00000142856 ITGB3BP -53584 sc-eQTL 3.17e-01 -0.094 0.0938 0.378 DC L1
ENSG00000203965 EFCAB7 16765 sc-eQTL 2.73e-01 -0.0896 0.0816 0.378 DC L1
ENSG00000079739 PGM1 -53274 sc-eQTL 6.17e-01 0.0388 0.0774 0.382 Mono L1
ENSG00000088035 ALG6 172562 sc-eQTL 7.55e-01 0.0252 0.0808 0.382 Mono L1
ENSG00000116641 DOCK7 851751 sc-eQTL 6.29e-02 -0.145 0.0775 0.382 Mono L1
ENSG00000125703 ATG4C 756005 sc-eQTL 1.21e-01 0.0818 0.0525 0.382 Mono L1
ENSG00000142856 ITGB3BP -53584 sc-eQTL 8.57e-04 -0.275 0.0813 0.382 Mono L1
ENSG00000079739 PGM1 -53274 sc-eQTL 4.46e-01 0.0507 0.0664 0.382 NK L1
ENSG00000088035 ALG6 172562 sc-eQTL 1.57e-02 0.187 0.0769 0.382 NK L1
ENSG00000116641 DOCK7 851751 sc-eQTL 6.25e-01 0.0314 0.0642 0.382 NK L1
ENSG00000125703 ATG4C 756005 sc-eQTL 5.55e-01 -0.0407 0.0689 0.382 NK L1
ENSG00000142856 ITGB3BP -53584 sc-eQTL 6.28e-04 -0.289 0.0833 0.382 NK L1
ENSG00000203965 EFCAB7 16765 sc-eQTL 4.37e-01 -0.0724 0.0929 0.382 NK L1
ENSG00000079739 PGM1 -53274 sc-eQTL 8.88e-01 -0.0107 0.0757 0.382 Other_T L1
ENSG00000088035 ALG6 172562 sc-eQTL 5.13e-01 -0.0498 0.076 0.382 Other_T L1
ENSG00000116641 DOCK7 851751 sc-eQTL 5.24e-01 0.0496 0.0776 0.382 Other_T L1
ENSG00000125703 ATG4C 756005 sc-eQTL 3.24e-02 0.143 0.0665 0.382 Other_T L1
ENSG00000142856 ITGB3BP -53584 sc-eQTL 2.55e-01 -0.0678 0.0595 0.382 Other_T L1
ENSG00000203965 EFCAB7 16765 sc-eQTL 3.78e-01 -0.0811 0.0919 0.382 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -53274 sc-eQTL 5.52e-01 0.0617 0.103 0.38 B_Activated L2
ENSG00000088035 ALG6 172562 sc-eQTL 2.58e-01 0.112 0.0988 0.38 B_Activated L2
ENSG00000116641 DOCK7 851751 sc-eQTL 7.29e-01 0.032 0.0923 0.38 B_Activated L2
ENSG00000125703 ATG4C 756005 sc-eQTL 5.86e-01 0.053 0.097 0.38 B_Activated L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 9.72e-02 -0.157 0.0941 0.38 B_Activated L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 2.36e-01 -0.106 0.0895 0.38 B_Activated L2
ENSG00000079739 PGM1 -53274 sc-eQTL 1.63e-01 0.124 0.089 0.384 B_Intermediate L2
ENSG00000088035 ALG6 172562 sc-eQTL 1.84e-01 -0.121 0.0904 0.384 B_Intermediate L2
ENSG00000116641 DOCK7 851751 sc-eQTL 9.74e-01 -0.00286 0.0867 0.384 B_Intermediate L2
ENSG00000125703 ATG4C 756005 sc-eQTL 8.74e-02 0.125 0.0729 0.384 B_Intermediate L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 8.13e-03 -0.23 0.086 0.384 B_Intermediate L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 5.38e-04 -0.296 0.0842 0.384 B_Intermediate L2
ENSG00000079739 PGM1 -53274 sc-eQTL 8.60e-01 0.0157 0.0887 0.379 B_Memory L2
ENSG00000088035 ALG6 172562 sc-eQTL 4.54e-01 0.0675 0.09 0.379 B_Memory L2
ENSG00000116641 DOCK7 851751 sc-eQTL 1.16e-01 -0.133 0.084 0.379 B_Memory L2
ENSG00000125703 ATG4C 756005 sc-eQTL 8.17e-01 -0.0186 0.0803 0.379 B_Memory L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 1.85e-01 -0.122 0.0916 0.379 B_Memory L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 4.66e-02 -0.181 0.0904 0.379 B_Memory L2
ENSG00000079739 PGM1 -53274 sc-eQTL 3.07e-01 0.0931 0.0909 0.382 B_Naive1 L2
ENSG00000088035 ALG6 172562 sc-eQTL 9.15e-01 -0.00977 0.0915 0.382 B_Naive1 L2
ENSG00000116641 DOCK7 851751 sc-eQTL 7.30e-01 -0.0302 0.0876 0.382 B_Naive1 L2
ENSG00000125703 ATG4C 756005 sc-eQTL 6.63e-01 0.0294 0.0675 0.382 B_Naive1 L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 8.01e-05 -0.347 0.0863 0.382 B_Naive1 L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 2.16e-04 -0.348 0.0925 0.382 B_Naive1 L2
ENSG00000079739 PGM1 -53274 sc-eQTL 7.11e-01 0.0334 0.0902 0.382 B_Naive2 L2
ENSG00000088035 ALG6 172562 sc-eQTL 5.39e-01 0.0578 0.094 0.382 B_Naive2 L2
ENSG00000116641 DOCK7 851751 sc-eQTL 5.71e-01 0.0513 0.0904 0.382 B_Naive2 L2
ENSG00000125703 ATG4C 756005 sc-eQTL 9.90e-01 -0.00113 0.0871 0.382 B_Naive2 L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 3.52e-06 -0.427 0.0897 0.382 B_Naive2 L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 7.95e-02 0.164 0.0933 0.382 B_Naive2 L2
ENSG00000079739 PGM1 -53274 sc-eQTL 6.57e-01 -0.0396 0.089 0.382 CD4_CTL L2
ENSG00000088035 ALG6 172562 sc-eQTL 2.27e-01 -0.114 0.0938 0.382 CD4_CTL L2
ENSG00000116641 DOCK7 851751 sc-eQTL 2.86e-01 0.0877 0.082 0.382 CD4_CTL L2
ENSG00000125703 ATG4C 756005 sc-eQTL 6.57e-01 -0.0378 0.0851 0.382 CD4_CTL L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 7.54e-01 -0.0286 0.091 0.382 CD4_CTL L2
ENSG00000158966 CACHD1 -929992 sc-eQTL 9.66e-01 0.00141 0.0331 0.382 CD4_CTL L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 7.17e-01 0.0314 0.0865 0.382 CD4_CTL L2
ENSG00000079739 PGM1 -53274 sc-eQTL 1.81e-01 0.0971 0.0723 0.382 CD4_Naive L2
ENSG00000088035 ALG6 172562 sc-eQTL 8.80e-01 0.012 0.0789 0.382 CD4_Naive L2
ENSG00000116641 DOCK7 851751 sc-eQTL 9.68e-01 -0.00309 0.0776 0.382 CD4_Naive L2
ENSG00000125703 ATG4C 756005 sc-eQTL 6.07e-01 0.0353 0.0685 0.382 CD4_Naive L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 1.16e-05 -0.36 0.08 0.382 CD4_Naive L2
ENSG00000158966 CACHD1 -929992 sc-eQTL 1.99e-01 0.0636 0.0494 0.382 CD4_Naive L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 2.75e-02 -0.183 0.0822 0.382 CD4_Naive L2
ENSG00000079739 PGM1 -53274 sc-eQTL 4.95e-01 -0.0521 0.0763 0.382 CD4_TCM L2
ENSG00000088035 ALG6 172562 sc-eQTL 9.52e-01 0.00533 0.0887 0.382 CD4_TCM L2
ENSG00000116641 DOCK7 851751 sc-eQTL 1.18e-01 -0.123 0.0781 0.382 CD4_TCM L2
ENSG00000125703 ATG4C 756005 sc-eQTL 3.22e-01 -0.0757 0.0763 0.382 CD4_TCM L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 8.36e-04 -0.298 0.0878 0.382 CD4_TCM L2
ENSG00000158966 CACHD1 -929992 sc-eQTL 1.18e-01 0.112 0.071 0.382 CD4_TCM L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 5.19e-03 -0.242 0.0857 0.382 CD4_TCM L2
ENSG00000079739 PGM1 -53274 sc-eQTL 5.00e-02 0.174 0.0883 0.382 CD4_TEM L2
ENSG00000088035 ALG6 172562 sc-eQTL 9.98e-01 0.000267 0.0895 0.382 CD4_TEM L2
ENSG00000116641 DOCK7 851751 sc-eQTL 8.19e-01 0.02 0.0873 0.382 CD4_TEM L2
ENSG00000125703 ATG4C 756005 sc-eQTL 1.85e-01 0.112 0.0844 0.382 CD4_TEM L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 5.66e-03 -0.24 0.0859 0.382 CD4_TEM L2
ENSG00000158966 CACHD1 -929992 sc-eQTL 9.09e-01 -0.00619 0.0541 0.382 CD4_TEM L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 4.19e-01 -0.0732 0.0905 0.382 CD4_TEM L2
ENSG00000079739 PGM1 -53274 sc-eQTL 7.82e-01 -0.0228 0.0821 0.382 CD8_CTL L2
ENSG00000088035 ALG6 172562 sc-eQTL 1.12e-01 -0.138 0.0868 0.382 CD8_CTL L2
ENSG00000116641 DOCK7 851751 sc-eQTL 7.29e-01 -0.0287 0.0829 0.382 CD8_CTL L2
ENSG00000125703 ATG4C 756005 sc-eQTL 4.81e-02 0.174 0.0874 0.382 CD8_CTL L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 1.56e-01 -0.13 0.0913 0.382 CD8_CTL L2
ENSG00000158966 CACHD1 -929992 sc-eQTL 5.06e-01 -0.0259 0.0389 0.382 CD8_CTL L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 2.12e-01 -0.117 0.0936 0.382 CD8_CTL L2
ENSG00000079739 PGM1 -53274 sc-eQTL 1.99e-01 0.106 0.0818 0.382 CD8_Naive L2
ENSG00000088035 ALG6 172562 sc-eQTL 6.19e-01 0.0423 0.085 0.382 CD8_Naive L2
ENSG00000116641 DOCK7 851751 sc-eQTL 6.23e-01 -0.0433 0.0879 0.382 CD8_Naive L2
ENSG00000125703 ATG4C 756005 sc-eQTL 9.86e-01 -0.00145 0.0844 0.382 CD8_Naive L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 2.80e-07 -0.426 0.0803 0.382 CD8_Naive L2
ENSG00000158966 CACHD1 -929992 sc-eQTL 5.92e-01 0.0318 0.0592 0.382 CD8_Naive L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 5.09e-02 -0.157 0.0799 0.382 CD8_Naive L2
ENSG00000079739 PGM1 -53274 sc-eQTL 7.47e-01 -0.0289 0.0893 0.382 CD8_TCM L2
ENSG00000088035 ALG6 172562 sc-eQTL 7.63e-01 -0.0273 0.0904 0.382 CD8_TCM L2
ENSG00000116641 DOCK7 851751 sc-eQTL 7.38e-01 -0.0295 0.0882 0.382 CD8_TCM L2
ENSG00000125703 ATG4C 756005 sc-eQTL 8.73e-01 -0.0145 0.0903 0.382 CD8_TCM L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 2.83e-01 -0.0942 0.0874 0.382 CD8_TCM L2
ENSG00000158966 CACHD1 -929992 sc-eQTL 4.93e-01 0.0316 0.046 0.382 CD8_TCM L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 1.22e-01 -0.138 0.0888 0.382 CD8_TCM L2
ENSG00000079739 PGM1 -53274 sc-eQTL 9.69e-02 -0.152 0.091 0.372 CD8_TEM L2
ENSG00000088035 ALG6 172562 sc-eQTL 7.97e-01 0.0237 0.092 0.372 CD8_TEM L2
ENSG00000116641 DOCK7 851751 sc-eQTL 5.30e-01 -0.0561 0.0891 0.372 CD8_TEM L2
ENSG00000125703 ATG4C 756005 sc-eQTL 7.34e-02 0.153 0.0851 0.372 CD8_TEM L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 1.32e-01 -0.14 0.0923 0.372 CD8_TEM L2
ENSG00000158966 CACHD1 -929992 sc-eQTL 3.28e-01 -0.0185 0.0189 0.372 CD8_TEM L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 6.44e-02 -0.166 0.0892 0.372 CD8_TEM L2
ENSG00000079739 PGM1 -53274 sc-eQTL 9.34e-01 0.00729 0.0885 0.381 MAIT L2
ENSG00000088035 ALG6 172562 sc-eQTL 1.07e-01 -0.141 0.087 0.381 MAIT L2
ENSG00000116641 DOCK7 851751 sc-eQTL 6.80e-01 0.0346 0.0839 0.381 MAIT L2
ENSG00000125703 ATG4C 756005 sc-eQTL 4.07e-02 0.18 0.0876 0.381 MAIT L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 9.67e-02 -0.147 0.0881 0.381 MAIT L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 9.72e-01 -0.00317 0.0913 0.381 MAIT L2
ENSG00000079739 PGM1 -53274 sc-eQTL 3.69e-01 0.0789 0.0877 0.382 NK_CD56bright L2
ENSG00000088035 ALG6 172562 sc-eQTL 2.12e-01 0.112 0.0897 0.382 NK_CD56bright L2
ENSG00000116641 DOCK7 851751 sc-eQTL 6.57e-01 0.0347 0.078 0.382 NK_CD56bright L2
ENSG00000125703 ATG4C 756005 sc-eQTL 5.06e-01 0.058 0.0871 0.382 NK_CD56bright L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 5.27e-01 -0.0574 0.0907 0.382 NK_CD56bright L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 8.65e-02 -0.153 0.0889 0.382 NK_CD56bright L2
ENSG00000079739 PGM1 -53274 sc-eQTL 5.97e-01 0.0363 0.0686 0.384 NK_CD56dim L2
ENSG00000088035 ALG6 172562 sc-eQTL 2.00e-01 0.111 0.0867 0.384 NK_CD56dim L2
ENSG00000116641 DOCK7 851751 sc-eQTL 7.29e-01 -0.0263 0.0758 0.384 NK_CD56dim L2
ENSG00000125703 ATG4C 756005 sc-eQTL 1.15e-02 -0.193 0.0758 0.384 NK_CD56dim L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 1.12e-01 -0.139 0.0871 0.384 NK_CD56dim L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 9.88e-01 -0.00137 0.0946 0.384 NK_CD56dim L2
ENSG00000079739 PGM1 -53274 sc-eQTL 5.83e-01 -0.0515 0.0937 0.388 NK_HLA L2
ENSG00000088035 ALG6 172562 sc-eQTL 1.20e-01 0.151 0.0967 0.388 NK_HLA L2
ENSG00000116641 DOCK7 851751 sc-eQTL 7.69e-01 -0.0219 0.0744 0.388 NK_HLA L2
ENSG00000125703 ATG4C 756005 sc-eQTL 6.43e-01 0.0402 0.0865 0.388 NK_HLA L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 8.47e-02 -0.156 0.0901 0.388 NK_HLA L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 3.70e-01 0.0775 0.0863 0.388 NK_HLA L2
ENSG00000079739 PGM1 -53274 sc-eQTL 3.55e-01 0.07 0.0755 0.384 NK_cytokine L2
ENSG00000088035 ALG6 172562 sc-eQTL 4.43e-01 0.0656 0.0854 0.384 NK_cytokine L2
ENSG00000116641 DOCK7 851751 sc-eQTL 6.84e-01 0.0322 0.0792 0.384 NK_cytokine L2
ENSG00000125703 ATG4C 756005 sc-eQTL 3.09e-01 0.0824 0.0808 0.384 NK_cytokine L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 5.51e-03 -0.231 0.0824 0.384 NK_cytokine L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 9.15e-01 -0.00955 0.0894 0.384 NK_cytokine L2
ENSG00000079739 PGM1 -53274 sc-eQTL 3.86e-01 -0.0953 0.11 0.378 PB L2
ENSG00000088035 ALG6 172562 sc-eQTL 8.24e-01 -0.0258 0.115 0.378 PB L2
ENSG00000116641 DOCK7 851751 sc-eQTL 7.51e-02 -0.219 0.122 0.378 PB L2
ENSG00000125703 ATG4C 756005 sc-eQTL 2.79e-01 0.116 0.107 0.378 PB L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 1.27e-01 -0.164 0.106 0.378 PB L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 1.50e-01 -0.169 0.117 0.378 PB L2
ENSG00000079739 PGM1 -53274 sc-eQTL 3.17e-01 -0.0825 0.0823 0.38 Pro_T L2
ENSG00000088035 ALG6 172562 sc-eQTL 7.89e-01 -0.0225 0.0839 0.38 Pro_T L2
ENSG00000116641 DOCK7 851751 sc-eQTL 3.76e-01 -0.0745 0.084 0.38 Pro_T L2
ENSG00000125703 ATG4C 756005 sc-eQTL 8.74e-02 -0.126 0.0732 0.38 Pro_T L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 6.04e-02 0.138 0.0733 0.38 Pro_T L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 5.28e-01 0.0543 0.0858 0.38 Pro_T L2
ENSG00000079739 PGM1 -53274 sc-eQTL 8.27e-01 -0.0191 0.0876 0.382 Treg L2
ENSG00000088035 ALG6 172562 sc-eQTL 2.05e-01 0.119 0.0933 0.382 Treg L2
ENSG00000116641 DOCK7 851751 sc-eQTL 3.96e-01 0.073 0.0858 0.382 Treg L2
ENSG00000125703 ATG4C 756005 sc-eQTL 4.91e-01 0.0605 0.0878 0.382 Treg L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 3.84e-01 0.0801 0.0918 0.382 Treg L2
ENSG00000158966 CACHD1 -929992 sc-eQTL 1.34e-02 -0.171 0.0685 0.382 Treg L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 5.54e-01 -0.0521 0.0879 0.382 Treg L2
ENSG00000079739 PGM1 -53274 sc-eQTL 9.03e-01 0.0107 0.0877 0.38 cDC L2
ENSG00000088035 ALG6 172562 sc-eQTL 9.99e-01 0.000128 0.0889 0.38 cDC L2
ENSG00000116641 DOCK7 851751 sc-eQTL 8.81e-01 -0.0131 0.0873 0.38 cDC L2
ENSG00000125703 ATG4C 756005 sc-eQTL 8.97e-01 -0.00985 0.0758 0.38 cDC L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 2.86e-01 -0.102 0.0957 0.38 cDC L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 5.98e-01 -0.0407 0.0771 0.38 cDC L2
ENSG00000079739 PGM1 -53274 sc-eQTL 4.05e-01 0.0673 0.0807 0.382 cMono_IL1B L2
ENSG00000088035 ALG6 172562 sc-eQTL 9.69e-01 -0.00316 0.0809 0.382 cMono_IL1B L2
ENSG00000116641 DOCK7 851751 sc-eQTL 6.67e-02 -0.156 0.0846 0.382 cMono_IL1B L2
ENSG00000125703 ATG4C 756005 sc-eQTL 4.73e-01 0.0431 0.0599 0.382 cMono_IL1B L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 9.80e-04 -0.277 0.0828 0.382 cMono_IL1B L2
ENSG00000079739 PGM1 -53274 sc-eQTL 9.75e-01 0.00278 0.0903 0.382 cMono_S100A L2
ENSG00000088035 ALG6 172562 sc-eQTL 6.16e-01 -0.0459 0.0915 0.382 cMono_S100A L2
ENSG00000116641 DOCK7 851751 sc-eQTL 8.13e-01 -0.0201 0.0849 0.382 cMono_S100A L2
ENSG00000125703 ATG4C 756005 sc-eQTL 5.82e-02 0.139 0.0729 0.382 cMono_S100A L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 3.12e-01 -0.0839 0.0827 0.382 cMono_S100A L2
ENSG00000079739 PGM1 -53274 sc-eQTL 8.75e-01 0.0156 0.0985 0.397 gdT L2
ENSG00000088035 ALG6 172562 sc-eQTL 7.01e-01 -0.0404 0.105 0.397 gdT L2
ENSG00000116641 DOCK7 851751 sc-eQTL 3.47e-02 0.216 0.101 0.397 gdT L2
ENSG00000125703 ATG4C 756005 sc-eQTL 8.92e-01 -0.0133 0.0984 0.397 gdT L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 2.88e-01 -0.111 0.104 0.397 gdT L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 5.72e-01 0.0582 0.103 0.397 gdT L2
ENSG00000079739 PGM1 -53274 sc-eQTL 5.26e-02 0.177 0.0907 0.378 intMono L2
ENSG00000088035 ALG6 172562 sc-eQTL 1.49e-01 0.123 0.0848 0.378 intMono L2
ENSG00000116641 DOCK7 851751 sc-eQTL 9.50e-01 -0.00545 0.0871 0.378 intMono L2
ENSG00000125703 ATG4C 756005 sc-eQTL 2.09e-01 0.104 0.0828 0.378 intMono L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 3.74e-03 -0.263 0.0897 0.378 intMono L2
ENSG00000079739 PGM1 -53274 sc-eQTL 8.54e-01 0.0149 0.0811 0.382 ncMono L2
ENSG00000088035 ALG6 172562 sc-eQTL 1.83e-01 -0.119 0.0887 0.382 ncMono L2
ENSG00000116641 DOCK7 851751 sc-eQTL 2.18e-01 -0.108 0.0874 0.382 ncMono L2
ENSG00000125703 ATG4C 756005 sc-eQTL 2.28e-01 -0.0988 0.0816 0.382 ncMono L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 4.59e-02 -0.17 0.0849 0.382 ncMono L2
ENSG00000079739 PGM1 -53274 sc-eQTL 7.10e-01 0.037 0.0995 0.379 pDC L2
ENSG00000088035 ALG6 172562 sc-eQTL 1.20e-01 0.15 0.0962 0.379 pDC L2
ENSG00000116641 DOCK7 851751 sc-eQTL 7.29e-02 -0.177 0.098 0.379 pDC L2
ENSG00000125703 ATG4C 756005 sc-eQTL 7.89e-01 -0.0238 0.0888 0.379 pDC L2
ENSG00000142856 ITGB3BP -53584 sc-eQTL 5.61e-01 -0.0581 0.0996 0.379 pDC L2
ENSG00000203965 EFCAB7 16765 sc-eQTL 9.64e-01 0.004 0.0883 0.379 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -53274 sc-eQTL 4.92e-01 0.0577 0.0838 0.382 B_Memory LOneK1K
ENSG00000088035 ALG6 172562 sc-eQTL 4.43e-01 -0.0712 0.0926 0.382 B_Memory LOneK1K
ENSG00000116641 DOCK7 851751 sc-eQTL 4.17e-01 -0.0654 0.0804 0.382 B_Memory LOneK1K
ENSG00000125703 ATG4C 756005 sc-eQTL 1.41e-01 0.0957 0.0647 0.382 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -53584 sc-eQTL 4.40e-03 -0.241 0.0839 0.382 B_Memory LOneK1K
ENSG00000203965 EFCAB7 16765 sc-eQTL 3.23e-06 -0.405 0.0846 0.382 B_Memory LOneK1K
ENSG00000079739 PGM1 -53274 sc-eQTL 2.56e-01 0.101 0.0887 0.382 B_Naive LOneK1K
ENSG00000088035 ALG6 172562 sc-eQTL 9.28e-01 0.00831 0.0916 0.382 B_Naive LOneK1K
ENSG00000116641 DOCK7 851751 sc-eQTL 9.80e-01 0.00216 0.0855 0.382 B_Naive LOneK1K
ENSG00000125703 ATG4C 756005 sc-eQTL 9.78e-01 -0.00183 0.0653 0.382 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -53584 sc-eQTL 1.11e-06 -0.438 0.0872 0.382 B_Naive LOneK1K
ENSG00000203965 EFCAB7 16765 sc-eQTL 3.49e-02 -0.195 0.0918 0.382 B_Naive LOneK1K
ENSG00000079739 PGM1 -53274 sc-eQTL 7.26e-01 0.029 0.0826 0.382 CD14_Mono LOneK1K
ENSG00000088035 ALG6 172562 sc-eQTL 7.16e-01 -0.0292 0.08 0.382 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 851751 sc-eQTL 6.52e-02 -0.148 0.0799 0.382 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 756005 sc-eQTL 6.10e-02 0.104 0.0552 0.382 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -53584 sc-eQTL 5.15e-03 -0.229 0.0809 0.382 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -53274 sc-eQTL 5.58e-02 0.15 0.0781 0.381 CD16_Mono LOneK1K
ENSG00000088035 ALG6 172562 sc-eQTL 5.98e-01 0.0473 0.0894 0.381 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 851751 sc-eQTL 3.71e-01 -0.0792 0.0883 0.381 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 756005 sc-eQTL 2.86e-01 -0.0806 0.0753 0.381 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -53584 sc-eQTL 7.50e-04 -0.292 0.0853 0.381 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -53274 sc-eQTL 6.00e-01 0.0354 0.0673 0.384 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 172562 sc-eQTL 4.03e-02 0.165 0.0801 0.384 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 851751 sc-eQTL 7.02e-01 0.0277 0.0724 0.384 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 756005 sc-eQTL 5.75e-01 -0.0406 0.0723 0.384 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -53584 sc-eQTL 1.39e-03 -0.271 0.0836 0.384 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 16765 sc-eQTL 9.53e-01 -0.00554 0.0946 0.384 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -53274 eQTL 2.32e-11 0.123 0.0181 0.00155 0.00233 0.38
ENSG00000088035 ALG6 172562 eQTL 0.0021 0.0423 0.0137 0.0 0.0 0.38
ENSG00000116652 DLEU2L -6945 eQTL 0.00625 -0.0736 0.0269 0.00147 0.0 0.38
ENSG00000185483 ROR1 -233880 pQTL 0.0469 0.0275 0.0138 0.0 0.0 0.38
ENSG00000203965 EFCAB7 16765 eQTL 2.46e-04 -0.0912 0.0248 0.0 0.0 0.38
ENSG00000230798 FOXD3-AS1 215696 eQTL 0.00786 0.0719 0.027 0.0011 0.00101 0.38

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -53274 9.82e-06 1.09e-05 1.25e-06 5.17e-06 2.5e-06 4.19e-06 1.07e-05 2.17e-06 9.55e-06 5.39e-06 1.28e-05 5.63e-06 1.53e-05 3.65e-06 2.94e-06 6.34e-06 4.62e-06 7.79e-06 2.64e-06 2.86e-06 5.07e-06 9.61e-06 8.51e-06 3.36e-06 1.48e-05 3.9e-06 5.21e-06 3.97e-06 1.02e-05 8.53e-06 5.9e-06 9.93e-07 1.27e-06 3.14e-06 4.58e-06 2.65e-06 1.72e-06 1.98e-06 1.89e-06 9.75e-07 1.01e-06 1.31e-05 1.42e-06 1.67e-07 8.01e-07 1.77e-06 1.56e-06 7.32e-07 4.49e-07
ENSG00000088035 ALG6 172562 2.71e-06 2.6e-06 2.73e-07 1.85e-06 4.65e-07 8.48e-07 1.82e-06 6.19e-07 1.83e-06 9.51e-07 2.5e-06 1.3e-06 3.44e-06 1.38e-06 7.39e-07 1.54e-06 1.1e-06 2.18e-06 6.65e-07 9.52e-07 1.11e-06 2.77e-06 2.32e-06 9.56e-07 3.45e-06 1.2e-06 1.26e-06 1.45e-06 1.92e-06 1.81e-06 1.73e-06 2.65e-07 4.74e-07 1.25e-06 1.26e-06 7.27e-07 7.24e-07 4.29e-07 9.25e-07 3.47e-07 2.89e-07 3.33e-06 4.86e-07 1.66e-07 3.49e-07 2.98e-07 6.75e-07 2.34e-07 2.46e-07