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Genes within 1Mb (chr1:63529439:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -63972 sc-eQTL 1.64e-01 0.102 0.0733 0.412 B L1
ENSG00000088035 ALG6 161864 sc-eQTL 7.15e-01 0.0279 0.0763 0.412 B L1
ENSG00000116641 DOCK7 841053 sc-eQTL 3.77e-01 -0.0675 0.0762 0.412 B L1
ENSG00000125703 ATG4C 745307 sc-eQTL 4.53e-01 -0.0399 0.053 0.412 B L1
ENSG00000142856 ITGB3BP -64282 sc-eQTL 2.57e-07 -0.422 0.0793 0.412 B L1
ENSG00000203965 EFCAB7 6067 sc-eQTL 4.68e-05 -0.346 0.0832 0.412 B L1
ENSG00000079739 PGM1 -63972 sc-eQTL 2.81e-01 0.0682 0.0631 0.412 CD4T L1
ENSG00000088035 ALG6 161864 sc-eQTL 3.29e-01 0.0682 0.0697 0.412 CD4T L1
ENSG00000116641 DOCK7 841053 sc-eQTL 7.89e-01 -0.0189 0.0707 0.412 CD4T L1
ENSG00000125703 ATG4C 745307 sc-eQTL 8.16e-01 0.0133 0.0571 0.412 CD4T L1
ENSG00000142856 ITGB3BP -64282 sc-eQTL 3.74e-08 -0.431 0.0754 0.412 CD4T L1
ENSG00000158966 CACHD1 -940690 sc-eQTL 1.82e-01 0.0645 0.0482 0.412 CD4T L1
ENSG00000203965 EFCAB7 6067 sc-eQTL 2.24e-03 -0.22 0.0712 0.412 CD4T L1
ENSG00000079739 PGM1 -63972 sc-eQTL 9.53e-01 -0.00411 0.07 0.412 CD8T L1
ENSG00000088035 ALG6 161864 sc-eQTL 9.68e-01 -0.00309 0.0771 0.412 CD8T L1
ENSG00000116641 DOCK7 841053 sc-eQTL 7.14e-01 -0.0286 0.0781 0.412 CD8T L1
ENSG00000125703 ATG4C 745307 sc-eQTL 7.35e-01 0.0252 0.0742 0.412 CD8T L1
ENSG00000142856 ITGB3BP -64282 sc-eQTL 4.57e-09 -0.468 0.0765 0.412 CD8T L1
ENSG00000158966 CACHD1 -940690 sc-eQTL 2.22e-01 0.0512 0.0418 0.412 CD8T L1
ENSG00000203965 EFCAB7 6067 sc-eQTL 1.18e-04 -0.313 0.0799 0.412 CD8T L1
ENSG00000079739 PGM1 -63972 sc-eQTL 2.40e-01 0.0907 0.0769 0.412 DC L1
ENSG00000088035 ALG6 161864 sc-eQTL 2.60e-01 0.0897 0.0794 0.412 DC L1
ENSG00000116641 DOCK7 841053 sc-eQTL 8.79e-01 0.0125 0.0816 0.412 DC L1
ENSG00000125703 ATG4C 745307 sc-eQTL 5.91e-01 -0.0343 0.0638 0.412 DC L1
ENSG00000142856 ITGB3BP -64282 sc-eQTL 6.91e-01 -0.0355 0.0892 0.412 DC L1
ENSG00000203965 EFCAB7 6067 sc-eQTL 2.10e-01 -0.0973 0.0774 0.412 DC L1
ENSG00000079739 PGM1 -63972 sc-eQTL 4.88e-01 0.0526 0.0757 0.412 Mono L1
ENSG00000088035 ALG6 161864 sc-eQTL 5.89e-01 0.0427 0.079 0.412 Mono L1
ENSG00000116641 DOCK7 841053 sc-eQTL 9.47e-02 -0.127 0.0759 0.412 Mono L1
ENSG00000125703 ATG4C 745307 sc-eQTL 4.78e-01 0.0367 0.0516 0.412 Mono L1
ENSG00000142856 ITGB3BP -64282 sc-eQTL 3.52e-04 -0.288 0.0792 0.412 Mono L1
ENSG00000079739 PGM1 -63972 sc-eQTL 6.33e-01 0.0308 0.0645 0.412 NK L1
ENSG00000088035 ALG6 161864 sc-eQTL 1.08e-01 0.121 0.0752 0.412 NK L1
ENSG00000116641 DOCK7 841053 sc-eQTL 3.76e-01 0.0551 0.0622 0.412 NK L1
ENSG00000125703 ATG4C 745307 sc-eQTL 7.25e-01 -0.0236 0.0669 0.412 NK L1
ENSG00000142856 ITGB3BP -64282 sc-eQTL 4.83e-04 -0.286 0.0808 0.412 NK L1
ENSG00000203965 EFCAB7 6067 sc-eQTL 2.40e-01 -0.106 0.09 0.412 NK L1
ENSG00000079739 PGM1 -63972 sc-eQTL 3.40e-01 -0.0705 0.0737 0.412 Other_T L1
ENSG00000088035 ALG6 161864 sc-eQTL 7.12e-01 -0.0274 0.0742 0.412 Other_T L1
ENSG00000116641 DOCK7 841053 sc-eQTL 8.54e-01 0.0139 0.0758 0.412 Other_T L1
ENSG00000125703 ATG4C 745307 sc-eQTL 2.01e-02 0.152 0.0647 0.412 Other_T L1
ENSG00000142856 ITGB3BP -64282 sc-eQTL 2.66e-02 -0.128 0.0575 0.412 Other_T L1
ENSG00000203965 EFCAB7 6067 sc-eQTL 2.38e-01 -0.106 0.0894 0.412 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -63972 sc-eQTL 3.81e-01 0.0874 0.0997 0.413 B_Activated L2
ENSG00000088035 ALG6 161864 sc-eQTL 1.63e-01 0.133 0.0952 0.413 B_Activated L2
ENSG00000116641 DOCK7 841053 sc-eQTL 2.95e-01 0.0933 0.0888 0.413 B_Activated L2
ENSG00000125703 ATG4C 745307 sc-eQTL 5.53e-01 0.0556 0.0936 0.413 B_Activated L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 5.73e-02 -0.173 0.0906 0.413 B_Activated L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 2.41e-01 -0.102 0.0863 0.413 B_Activated L2
ENSG00000079739 PGM1 -63972 sc-eQTL 3.48e-01 0.0815 0.0866 0.414 B_Intermediate L2
ENSG00000088035 ALG6 161864 sc-eQTL 3.10e-01 -0.0895 0.0879 0.414 B_Intermediate L2
ENSG00000116641 DOCK7 841053 sc-eQTL 7.02e-01 0.0322 0.0842 0.414 B_Intermediate L2
ENSG00000125703 ATG4C 745307 sc-eQTL 6.12e-02 0.133 0.0707 0.414 B_Intermediate L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 6.69e-03 -0.228 0.0834 0.414 B_Intermediate L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 1.07e-03 -0.272 0.082 0.414 B_Intermediate L2
ENSG00000079739 PGM1 -63972 sc-eQTL 8.14e-01 -0.0202 0.0858 0.412 B_Memory L2
ENSG00000088035 ALG6 161864 sc-eQTL 6.19e-01 0.0434 0.0872 0.412 B_Memory L2
ENSG00000116641 DOCK7 841053 sc-eQTL 9.79e-02 -0.135 0.0813 0.412 B_Memory L2
ENSG00000125703 ATG4C 745307 sc-eQTL 8.16e-01 -0.0181 0.0777 0.412 B_Memory L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 7.69e-02 -0.157 0.0883 0.412 B_Memory L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 2.20e-02 -0.201 0.0872 0.412 B_Memory L2
ENSG00000079739 PGM1 -63972 sc-eQTL 1.83e-01 0.117 0.0873 0.412 B_Naive1 L2
ENSG00000088035 ALG6 161864 sc-eQTL 9.33e-01 -0.00738 0.088 0.412 B_Naive1 L2
ENSG00000116641 DOCK7 841053 sc-eQTL 9.70e-01 0.00321 0.0843 0.412 B_Naive1 L2
ENSG00000125703 ATG4C 745307 sc-eQTL 9.44e-01 -0.00453 0.0649 0.412 B_Naive1 L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 6.75e-06 -0.379 0.0821 0.412 B_Naive1 L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 1.68e-03 -0.286 0.0898 0.412 B_Naive1 L2
ENSG00000079739 PGM1 -63972 sc-eQTL 4.15e-01 0.0706 0.0865 0.412 B_Naive2 L2
ENSG00000088035 ALG6 161864 sc-eQTL 4.59e-01 0.0669 0.0902 0.412 B_Naive2 L2
ENSG00000116641 DOCK7 841053 sc-eQTL 8.80e-01 -0.0131 0.0869 0.412 B_Naive2 L2
ENSG00000125703 ATG4C 745307 sc-eQTL 2.56e-01 -0.0949 0.0834 0.412 B_Naive2 L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 7.68e-06 -0.397 0.0864 0.412 B_Naive2 L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 1.79e-01 0.121 0.0898 0.412 B_Naive2 L2
ENSG00000079739 PGM1 -63972 sc-eQTL 7.50e-01 -0.0276 0.0865 0.409 CD4_CTL L2
ENSG00000088035 ALG6 161864 sc-eQTL 6.19e-01 -0.0456 0.0914 0.409 CD4_CTL L2
ENSG00000116641 DOCK7 841053 sc-eQTL 4.39e-01 0.062 0.0799 0.409 CD4_CTL L2
ENSG00000125703 ATG4C 745307 sc-eQTL 8.99e-01 0.0106 0.0828 0.409 CD4_CTL L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 5.42e-01 -0.0541 0.0884 0.409 CD4_CTL L2
ENSG00000158966 CACHD1 -940690 sc-eQTL 8.56e-01 -0.00583 0.0322 0.409 CD4_CTL L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 9.38e-01 0.00655 0.0841 0.409 CD4_CTL L2
ENSG00000079739 PGM1 -63972 sc-eQTL 2.53e-01 0.0809 0.0706 0.412 CD4_Naive L2
ENSG00000088035 ALG6 161864 sc-eQTL 4.20e-01 0.062 0.0768 0.412 CD4_Naive L2
ENSG00000116641 DOCK7 841053 sc-eQTL 8.82e-01 -0.0112 0.0756 0.412 CD4_Naive L2
ENSG00000125703 ATG4C 745307 sc-eQTL 6.92e-01 0.0265 0.0668 0.412 CD4_Naive L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 1.73e-07 -0.414 0.0765 0.412 CD4_Naive L2
ENSG00000158966 CACHD1 -940690 sc-eQTL 1.99e-01 0.0621 0.0482 0.412 CD4_Naive L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 2.94e-02 -0.176 0.0802 0.412 CD4_Naive L2
ENSG00000079739 PGM1 -63972 sc-eQTL 9.35e-01 -0.00605 0.0741 0.412 CD4_TCM L2
ENSG00000088035 ALG6 161864 sc-eQTL 9.20e-01 0.0086 0.086 0.412 CD4_TCM L2
ENSG00000116641 DOCK7 841053 sc-eQTL 1.83e-01 -0.101 0.0759 0.412 CD4_TCM L2
ENSG00000125703 ATG4C 745307 sc-eQTL 1.46e-01 -0.108 0.0739 0.412 CD4_TCM L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 1.61e-04 -0.325 0.0846 0.412 CD4_TCM L2
ENSG00000158966 CACHD1 -940690 sc-eQTL 1.78e-01 0.0933 0.069 0.412 CD4_TCM L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 3.10e-03 -0.248 0.0829 0.412 CD4_TCM L2
ENSG00000079739 PGM1 -63972 sc-eQTL 6.09e-03 0.236 0.0852 0.412 CD4_TEM L2
ENSG00000088035 ALG6 161864 sc-eQTL 7.74e-01 0.0251 0.0872 0.412 CD4_TEM L2
ENSG00000116641 DOCK7 841053 sc-eQTL 6.90e-01 0.0339 0.085 0.412 CD4_TEM L2
ENSG00000125703 ATG4C 745307 sc-eQTL 2.55e-01 0.0939 0.0823 0.412 CD4_TEM L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 7.13e-03 -0.228 0.0838 0.412 CD4_TEM L2
ENSG00000158966 CACHD1 -940690 sc-eQTL 6.65e-01 0.0229 0.0527 0.412 CD4_TEM L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 1.22e-01 -0.136 0.0878 0.412 CD4_TEM L2
ENSG00000079739 PGM1 -63972 sc-eQTL 9.92e-01 0.00078 0.0792 0.412 CD8_CTL L2
ENSG00000088035 ALG6 161864 sc-eQTL 5.38e-01 -0.0519 0.0841 0.412 CD8_CTL L2
ENSG00000116641 DOCK7 841053 sc-eQTL 5.10e-01 -0.0527 0.0798 0.412 CD8_CTL L2
ENSG00000125703 ATG4C 745307 sc-eQTL 8.55e-02 0.146 0.0844 0.412 CD8_CTL L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 3.11e-02 -0.19 0.0874 0.412 CD8_CTL L2
ENSG00000158966 CACHD1 -940690 sc-eQTL 5.20e-01 -0.0241 0.0374 0.412 CD8_CTL L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 1.98e-01 -0.116 0.0902 0.412 CD8_CTL L2
ENSG00000079739 PGM1 -63972 sc-eQTL 2.10e-01 0.101 0.0801 0.412 CD8_Naive L2
ENSG00000088035 ALG6 161864 sc-eQTL 6.97e-01 0.0325 0.0832 0.412 CD8_Naive L2
ENSG00000116641 DOCK7 841053 sc-eQTL 8.42e-01 -0.0172 0.0861 0.412 CD8_Naive L2
ENSG00000125703 ATG4C 745307 sc-eQTL 6.93e-01 -0.0326 0.0826 0.412 CD8_Naive L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 1.10e-07 -0.43 0.0782 0.412 CD8_Naive L2
ENSG00000158966 CACHD1 -940690 sc-eQTL 6.21e-01 0.0287 0.058 0.412 CD8_Naive L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 3.66e-02 -0.164 0.0781 0.412 CD8_Naive L2
ENSG00000079739 PGM1 -63972 sc-eQTL 9.11e-01 -0.00972 0.0872 0.414 CD8_TCM L2
ENSG00000088035 ALG6 161864 sc-eQTL 7.49e-01 -0.0283 0.0883 0.414 CD8_TCM L2
ENSG00000116641 DOCK7 841053 sc-eQTL 7.02e-01 -0.0331 0.0861 0.414 CD8_TCM L2
ENSG00000125703 ATG4C 745307 sc-eQTL 4.55e-01 -0.0658 0.088 0.414 CD8_TCM L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 1.73e-01 -0.117 0.0852 0.414 CD8_TCM L2
ENSG00000158966 CACHD1 -940690 sc-eQTL 6.84e-01 0.0183 0.045 0.414 CD8_TCM L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 1.44e-01 -0.127 0.0868 0.414 CD8_TCM L2
ENSG00000079739 PGM1 -63972 sc-eQTL 1.33e-01 -0.135 0.0896 0.4 CD8_TEM L2
ENSG00000088035 ALG6 161864 sc-eQTL 6.98e-01 0.0351 0.0905 0.4 CD8_TEM L2
ENSG00000116641 DOCK7 841053 sc-eQTL 4.29e-01 -0.0694 0.0876 0.4 CD8_TEM L2
ENSG00000125703 ATG4C 745307 sc-eQTL 5.55e-02 0.161 0.0836 0.4 CD8_TEM L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 3.26e-02 -0.194 0.0902 0.4 CD8_TEM L2
ENSG00000158966 CACHD1 -940690 sc-eQTL 8.91e-01 0.00256 0.0186 0.4 CD8_TEM L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 5.18e-02 -0.172 0.0877 0.4 CD8_TEM L2
ENSG00000079739 PGM1 -63972 sc-eQTL 5.06e-01 -0.0573 0.0861 0.411 MAIT L2
ENSG00000088035 ALG6 161864 sc-eQTL 4.44e-01 -0.0653 0.0852 0.411 MAIT L2
ENSG00000116641 DOCK7 841053 sc-eQTL 9.92e-01 -0.000844 0.0817 0.411 MAIT L2
ENSG00000125703 ATG4C 745307 sc-eQTL 5.18e-02 0.167 0.0854 0.411 MAIT L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 1.03e-02 -0.22 0.085 0.411 MAIT L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 7.47e-01 -0.0287 0.0889 0.411 MAIT L2
ENSG00000079739 PGM1 -63972 sc-eQTL 7.83e-01 0.0236 0.0855 0.411 NK_CD56bright L2
ENSG00000088035 ALG6 161864 sc-eQTL 8.94e-02 0.149 0.0871 0.411 NK_CD56bright L2
ENSG00000116641 DOCK7 841053 sc-eQTL 4.54e-01 0.0569 0.0759 0.411 NK_CD56bright L2
ENSG00000125703 ATG4C 745307 sc-eQTL 9.88e-01 0.00127 0.0849 0.411 NK_CD56bright L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 6.22e-01 -0.0437 0.0883 0.411 NK_CD56bright L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 1.22e-01 -0.134 0.0867 0.411 NK_CD56bright L2
ENSG00000079739 PGM1 -63972 sc-eQTL 7.14e-01 0.0245 0.0667 0.412 NK_CD56dim L2
ENSG00000088035 ALG6 161864 sc-eQTL 5.99e-01 0.0446 0.0845 0.412 NK_CD56dim L2
ENSG00000116641 DOCK7 841053 sc-eQTL 9.11e-01 -0.00822 0.0736 0.412 NK_CD56dim L2
ENSG00000125703 ATG4C 745307 sc-eQTL 1.88e-02 -0.175 0.0738 0.412 NK_CD56dim L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 1.54e-01 -0.121 0.0847 0.412 NK_CD56dim L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 5.09e-01 -0.0608 0.0918 0.412 NK_CD56dim L2
ENSG00000079739 PGM1 -63972 sc-eQTL 7.26e-01 -0.0322 0.0915 0.416 NK_HLA L2
ENSG00000088035 ALG6 161864 sc-eQTL 2.77e-01 0.103 0.0946 0.416 NK_HLA L2
ENSG00000116641 DOCK7 841053 sc-eQTL 6.62e-01 -0.0318 0.0726 0.416 NK_HLA L2
ENSG00000125703 ATG4C 745307 sc-eQTL 8.60e-01 0.0149 0.0844 0.416 NK_HLA L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 6.10e-02 -0.166 0.0879 0.416 NK_HLA L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 4.55e-01 0.0631 0.0843 0.416 NK_HLA L2
ENSG00000079739 PGM1 -63972 sc-eQTL 3.47e-01 0.0691 0.0733 0.412 NK_cytokine L2
ENSG00000088035 ALG6 161864 sc-eQTL 9.11e-01 0.0093 0.083 0.412 NK_cytokine L2
ENSG00000116641 DOCK7 841053 sc-eQTL 6.85e-01 0.0312 0.0769 0.412 NK_cytokine L2
ENSG00000125703 ATG4C 745307 sc-eQTL 1.19e-01 0.123 0.0782 0.412 NK_cytokine L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 2.17e-03 -0.247 0.0797 0.412 NK_cytokine L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 8.58e-01 -0.0155 0.0868 0.412 NK_cytokine L2
ENSG00000079739 PGM1 -63972 sc-eQTL 3.46e-01 -0.102 0.108 0.404 PB L2
ENSG00000088035 ALG6 161864 sc-eQTL 9.67e-01 0.00467 0.113 0.404 PB L2
ENSG00000116641 DOCK7 841053 sc-eQTL 1.70e-01 -0.166 0.12 0.404 PB L2
ENSG00000125703 ATG4C 745307 sc-eQTL 5.97e-01 0.056 0.106 0.404 PB L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 1.35e-01 -0.157 0.104 0.404 PB L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 1.60e-01 -0.163 0.115 0.404 PB L2
ENSG00000079739 PGM1 -63972 sc-eQTL 2.75e-01 -0.0877 0.0801 0.411 Pro_T L2
ENSG00000088035 ALG6 161864 sc-eQTL 6.83e-01 -0.0334 0.0817 0.411 Pro_T L2
ENSG00000116641 DOCK7 841053 sc-eQTL 3.38e-01 -0.0786 0.0819 0.411 Pro_T L2
ENSG00000125703 ATG4C 745307 sc-eQTL 2.69e-01 -0.0793 0.0716 0.411 Pro_T L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 1.13e-01 0.114 0.0716 0.411 Pro_T L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 9.89e-01 0.00115 0.0837 0.411 Pro_T L2
ENSG00000079739 PGM1 -63972 sc-eQTL 6.72e-01 -0.0358 0.0846 0.412 Treg L2
ENSG00000088035 ALG6 161864 sc-eQTL 1.53e-01 0.129 0.0901 0.412 Treg L2
ENSG00000116641 DOCK7 841053 sc-eQTL 6.40e-01 0.0389 0.083 0.412 Treg L2
ENSG00000125703 ATG4C 745307 sc-eQTL 7.59e-01 0.0261 0.0849 0.412 Treg L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 6.85e-01 0.0361 0.0888 0.412 Treg L2
ENSG00000158966 CACHD1 -940690 sc-eQTL 2.57e-02 -0.149 0.0663 0.412 Treg L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 6.61e-01 -0.0373 0.0849 0.412 Treg L2
ENSG00000079739 PGM1 -63972 sc-eQTL 7.60e-01 0.0257 0.0841 0.41 cDC L2
ENSG00000088035 ALG6 161864 sc-eQTL 4.08e-01 -0.0705 0.0851 0.41 cDC L2
ENSG00000116641 DOCK7 841053 sc-eQTL 6.03e-01 0.0435 0.0836 0.41 cDC L2
ENSG00000125703 ATG4C 745307 sc-eQTL 5.56e-01 -0.0429 0.0726 0.41 cDC L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 4.61e-01 -0.0679 0.092 0.41 cDC L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 5.02e-01 -0.0498 0.0739 0.41 cDC L2
ENSG00000079739 PGM1 -63972 sc-eQTL 2.59e-01 0.0886 0.0783 0.412 cMono_IL1B L2
ENSG00000088035 ALG6 161864 sc-eQTL 7.80e-01 0.022 0.0786 0.412 cMono_IL1B L2
ENSG00000116641 DOCK7 841053 sc-eQTL 5.27e-02 -0.16 0.0822 0.412 cMono_IL1B L2
ENSG00000125703 ATG4C 745307 sc-eQTL 9.69e-01 0.00227 0.0583 0.412 cMono_IL1B L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 4.78e-05 -0.33 0.0794 0.412 cMono_IL1B L2
ENSG00000079739 PGM1 -63972 sc-eQTL 7.93e-01 0.023 0.0875 0.412 cMono_S100A L2
ENSG00000088035 ALG6 161864 sc-eQTL 7.80e-01 -0.0248 0.0887 0.412 cMono_S100A L2
ENSG00000116641 DOCK7 841053 sc-eQTL 8.91e-01 0.0112 0.0822 0.412 cMono_S100A L2
ENSG00000125703 ATG4C 745307 sc-eQTL 8.00e-02 0.124 0.0707 0.412 cMono_S100A L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 3.40e-01 -0.0767 0.0802 0.412 cMono_S100A L2
ENSG00000079739 PGM1 -63972 sc-eQTL 5.73e-01 0.0539 0.0954 0.424 gdT L2
ENSG00000088035 ALG6 161864 sc-eQTL 9.42e-01 0.00742 0.102 0.424 gdT L2
ENSG00000116641 DOCK7 841053 sc-eQTL 1.12e-01 0.158 0.099 0.424 gdT L2
ENSG00000125703 ATG4C 745307 sc-eQTL 5.06e-01 0.0635 0.0953 0.424 gdT L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 1.43e-01 -0.148 0.101 0.424 gdT L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 6.77e-01 0.0416 0.0996 0.424 gdT L2
ENSG00000079739 PGM1 -63972 sc-eQTL 4.37e-02 0.178 0.0879 0.409 intMono L2
ENSG00000088035 ALG6 161864 sc-eQTL 3.85e-01 0.0718 0.0825 0.409 intMono L2
ENSG00000116641 DOCK7 841053 sc-eQTL 7.78e-01 0.0238 0.0844 0.409 intMono L2
ENSG00000125703 ATG4C 745307 sc-eQTL 3.82e-01 0.0705 0.0805 0.409 intMono L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 5.73e-03 -0.243 0.0871 0.409 intMono L2
ENSG00000079739 PGM1 -63972 sc-eQTL 8.59e-01 0.014 0.0784 0.412 ncMono L2
ENSG00000088035 ALG6 161864 sc-eQTL 2.37e-01 -0.102 0.0858 0.412 ncMono L2
ENSG00000116641 DOCK7 841053 sc-eQTL 1.96e-01 -0.109 0.0844 0.412 ncMono L2
ENSG00000125703 ATG4C 745307 sc-eQTL 1.69e-01 -0.109 0.0788 0.412 ncMono L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 1.64e-01 -0.115 0.0824 0.412 ncMono L2
ENSG00000079739 PGM1 -63972 sc-eQTL 8.36e-01 -0.0199 0.0957 0.41 pDC L2
ENSG00000088035 ALG6 161864 sc-eQTL 3.27e-01 0.0915 0.0929 0.41 pDC L2
ENSG00000116641 DOCK7 841053 sc-eQTL 1.21e-01 -0.147 0.0945 0.41 pDC L2
ENSG00000125703 ATG4C 745307 sc-eQTL 9.97e-01 0.000342 0.0854 0.41 pDC L2
ENSG00000142856 ITGB3BP -64282 sc-eQTL 8.18e-01 -0.0221 0.0959 0.41 pDC L2
ENSG00000203965 EFCAB7 6067 sc-eQTL 7.74e-01 -0.0244 0.0849 0.41 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -63972 sc-eQTL 7.05e-01 0.031 0.0816 0.412 B_Memory LOneK1K
ENSG00000088035 ALG6 161864 sc-eQTL 5.84e-01 -0.0495 0.0902 0.412 B_Memory LOneK1K
ENSG00000116641 DOCK7 841053 sc-eQTL 5.46e-01 -0.0473 0.0783 0.412 B_Memory LOneK1K
ENSG00000125703 ATG4C 745307 sc-eQTL 1.34e-01 0.0949 0.063 0.412 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -64282 sc-eQTL 2.20e-03 -0.252 0.0814 0.412 B_Memory LOneK1K
ENSG00000203965 EFCAB7 6067 sc-eQTL 3.81e-06 -0.391 0.0825 0.412 B_Memory LOneK1K
ENSG00000079739 PGM1 -63972 sc-eQTL 1.34e-01 0.128 0.0851 0.412 B_Naive LOneK1K
ENSG00000088035 ALG6 161864 sc-eQTL 8.07e-01 0.0215 0.0881 0.412 B_Naive LOneK1K
ENSG00000116641 DOCK7 841053 sc-eQTL 8.67e-01 -0.0138 0.0822 0.412 B_Naive LOneK1K
ENSG00000125703 ATG4C 745307 sc-eQTL 2.78e-01 -0.0681 0.0626 0.412 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -64282 sc-eQTL 2.33e-07 -0.445 0.0833 0.412 B_Naive LOneK1K
ENSG00000203965 EFCAB7 6067 sc-eQTL 7.62e-02 -0.158 0.0885 0.412 B_Naive LOneK1K
ENSG00000079739 PGM1 -63972 sc-eQTL 5.02e-01 0.0541 0.0803 0.412 CD14_Mono LOneK1K
ENSG00000088035 ALG6 161864 sc-eQTL 9.54e-01 0.00449 0.0778 0.412 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 841053 sc-eQTL 8.34e-02 -0.135 0.0778 0.412 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 745307 sc-eQTL 2.44e-01 0.0631 0.054 0.412 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -64282 sc-eQTL 1.06e-03 -0.26 0.0781 0.412 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -63972 sc-eQTL 1.26e-01 0.117 0.076 0.412 CD16_Mono LOneK1K
ENSG00000088035 ALG6 161864 sc-eQTL 8.77e-01 0.0135 0.0868 0.412 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 841053 sc-eQTL 4.44e-01 -0.0658 0.0858 0.412 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 745307 sc-eQTL 1.88e-01 -0.0964 0.0729 0.412 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -64282 sc-eQTL 4.64e-03 -0.239 0.0834 0.412 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -63972 sc-eQTL 6.88e-01 0.0263 0.0654 0.412 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 161864 sc-eQTL 3.44e-01 0.0743 0.0784 0.412 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 841053 sc-eQTL 6.14e-01 0.0356 0.0703 0.412 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 745307 sc-eQTL 8.19e-01 -0.0161 0.0702 0.412 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -64282 sc-eQTL 6.39e-04 -0.281 0.081 0.412 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 6067 sc-eQTL 6.27e-01 -0.0447 0.0919 0.412 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -63972 eQTL 1.13e-14 0.135 0.0172 0.0159 0.016 0.418
ENSG00000088035 ALG6 161864 eQTL 7.46e-06 0.0587 0.013 0.0 0.0 0.418
ENSG00000116641 DOCK7 841071 eQTL 0.0119 -0.0552 0.0219 0.0 0.0 0.418
ENSG00000116652 DLEU2L -17643 eQTL 0.000651 -0.0876 0.0256 0.0048 0.00459 0.418
ENSG00000185483 ROR1 -244578 pQTL 0.0113 0.0336 0.0133 0.00136 0.0 0.417
ENSG00000203965 EFCAB7 6067 eQTL 1.59e-07 -0.124 0.0235 0.0113 0.0111 0.418
ENSG00000230798 FOXD3-AS1 204998 eQTL 0.0213 0.0596 0.0258 0.0 0.0 0.418

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -63972 6.08e-06 9.38e-06 1.35e-06 4.6e-06 1.92e-06 3.71e-06 9.57e-06 1.52e-06 7.7e-06 4.28e-06 1.07e-05 4.99e-06 1.27e-05 3.88e-06 1.58e-06 5.6e-06 3.7e-06 5.21e-06 2.29e-06 2.56e-06 3.66e-06 7.64e-06 6.94e-06 2.82e-06 1.28e-05 2.85e-06 4.22e-06 2.81e-06 8.17e-06 7.86e-06 4.57e-06 5.57e-07 7.68e-07 2.86e-06 3.56e-06 2.04e-06 1.43e-06 1.35e-06 1.61e-06 1.03e-06 9.55e-07 1.02e-05 9.02e-07 1.32e-07 6.91e-07 1.07e-06 9.71e-07 7.13e-07 6.17e-07
ENSG00000088035 ALG6 161864 2.28e-06 3.17e-06 3.22e-07 1.96e-06 4.59e-07 7.58e-07 2.12e-06 6.45e-07 2.28e-06 1.04e-06 2.45e-06 1.46e-06 3.83e-06 1.44e-06 5.68e-07 1.62e-06 1.56e-06 2.25e-06 9.64e-07 1.27e-06 1.16e-06 3.02e-06 2.61e-06 1.05e-06 4.08e-06 1.21e-06 1.31e-06 1.65e-06 2.54e-06 2.45e-06 1.94e-06 3.41e-07 5.85e-07 1.18e-06 1.47e-06 9.87e-07 8.12e-07 4.74e-07 1.31e-06 4.16e-07 1.52e-07 3.71e-06 4.98e-07 1.74e-07 3.21e-07 3.34e-07 5.13e-07 2.41e-07 2.46e-07