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Genes within 1Mb (chr1:63485428:CT:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -107983 sc-eQTL 3.79e-03 0.224 0.0766 0.348 B L1
ENSG00000088035 ALG6 117853 sc-eQTL 3.39e-01 -0.0774 0.0808 0.348 B L1
ENSG00000116641 DOCK7 797042 sc-eQTL 7.06e-01 0.0305 0.081 0.348 B L1
ENSG00000125703 ATG4C 701296 sc-eQTL 8.40e-01 -0.0114 0.0563 0.348 B L1
ENSG00000142856 ITGB3BP -108293 sc-eQTL 7.05e-20 0.744 0.0735 0.348 B L1
ENSG00000203965 EFCAB7 -37944 sc-eQTL 1.08e-05 0.395 0.0876 0.348 B L1
ENSG00000079739 PGM1 -107983 sc-eQTL 2.43e-01 0.078 0.0666 0.348 CD4T L1
ENSG00000088035 ALG6 117853 sc-eQTL 1.17e-02 -0.185 0.0726 0.348 CD4T L1
ENSG00000116641 DOCK7 797042 sc-eQTL 9.38e-01 -0.00582 0.0747 0.348 CD4T L1
ENSG00000125703 ATG4C 701296 sc-eQTL 9.94e-01 0.000488 0.0603 0.348 CD4T L1
ENSG00000142856 ITGB3BP -108293 sc-eQTL 2.76e-15 0.63 0.0738 0.348 CD4T L1
ENSG00000158966 CACHD1 -984701 sc-eQTL 5.20e-01 -0.0328 0.051 0.348 CD4T L1
ENSG00000203965 EFCAB7 -37944 sc-eQTL 1.14e-03 0.247 0.0749 0.348 CD4T L1
ENSG00000079739 PGM1 -107983 sc-eQTL 1.30e-01 0.111 0.0728 0.348 CD8T L1
ENSG00000088035 ALG6 117853 sc-eQTL 8.74e-01 -0.0128 0.0807 0.348 CD8T L1
ENSG00000116641 DOCK7 797042 sc-eQTL 6.08e-01 0.042 0.0817 0.348 CD8T L1
ENSG00000125703 ATG4C 701296 sc-eQTL 4.76e-01 -0.0554 0.0776 0.348 CD8T L1
ENSG00000142856 ITGB3BP -108293 sc-eQTL 1.36e-14 0.625 0.0755 0.348 CD8T L1
ENSG00000158966 CACHD1 -984701 sc-eQTL 2.30e-02 -0.0995 0.0434 0.348 CD8T L1
ENSG00000203965 EFCAB7 -37944 sc-eQTL 4.15e-03 0.246 0.0849 0.348 CD8T L1
ENSG00000079739 PGM1 -107983 sc-eQTL 4.75e-01 -0.0581 0.0811 0.342 DC L1
ENSG00000088035 ALG6 117853 sc-eQTL 7.48e-02 -0.149 0.0832 0.342 DC L1
ENSG00000116641 DOCK7 797042 sc-eQTL 8.90e-01 -0.0119 0.0859 0.342 DC L1
ENSG00000125703 ATG4C 701296 sc-eQTL 1.77e-01 0.0907 0.0669 0.342 DC L1
ENSG00000142856 ITGB3BP -108293 sc-eQTL 3.86e-03 0.269 0.092 0.342 DC L1
ENSG00000203965 EFCAB7 -37944 sc-eQTL 2.61e-03 0.244 0.0799 0.342 DC L1
ENSG00000079739 PGM1 -107983 sc-eQTL 6.44e-01 -0.0371 0.0802 0.348 Mono L1
ENSG00000088035 ALG6 117853 sc-eQTL 7.98e-03 -0.22 0.0823 0.348 Mono L1
ENSG00000116641 DOCK7 797042 sc-eQTL 4.71e-01 0.0584 0.0808 0.348 Mono L1
ENSG00000125703 ATG4C 701296 sc-eQTL 6.14e-01 -0.0276 0.0547 0.348 Mono L1
ENSG00000142856 ITGB3BP -108293 sc-eQTL 4.07e-06 0.389 0.0822 0.348 Mono L1
ENSG00000079739 PGM1 -107983 sc-eQTL 5.53e-01 0.0397 0.0669 0.348 NK L1
ENSG00000088035 ALG6 117853 sc-eQTL 1.28e-01 -0.119 0.078 0.348 NK L1
ENSG00000116641 DOCK7 797042 sc-eQTL 9.92e-01 0.000664 0.0646 0.348 NK L1
ENSG00000125703 ATG4C 701296 sc-eQTL 6.19e-01 0.0345 0.0694 0.348 NK L1
ENSG00000142856 ITGB3BP -108293 sc-eQTL 4.41e-05 0.346 0.0829 0.348 NK L1
ENSG00000203965 EFCAB7 -37944 sc-eQTL 9.65e-01 -0.00414 0.0937 0.348 NK L1
ENSG00000079739 PGM1 -107983 sc-eQTL 5.34e-01 0.0482 0.0775 0.348 Other_T L1
ENSG00000088035 ALG6 117853 sc-eQTL 4.30e-01 -0.0615 0.0778 0.348 Other_T L1
ENSG00000116641 DOCK7 797042 sc-eQTL 7.66e-01 0.0237 0.0795 0.348 Other_T L1
ENSG00000125703 ATG4C 701296 sc-eQTL 5.79e-02 -0.13 0.0683 0.348 Other_T L1
ENSG00000142856 ITGB3BP -108293 sc-eQTL 1.41e-01 0.0898 0.0607 0.348 Other_T L1
ENSG00000203965 EFCAB7 -37944 sc-eQTL 3.67e-01 0.0851 0.094 0.348 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -107983 sc-eQTL 4.61e-01 0.0771 0.104 0.334 B_Activated L2
ENSG00000088035 ALG6 117853 sc-eQTL 8.21e-01 0.0227 0.1 0.334 B_Activated L2
ENSG00000116641 DOCK7 797042 sc-eQTL 5.39e-01 -0.0574 0.0931 0.334 B_Activated L2
ENSG00000125703 ATG4C 701296 sc-eQTL 4.88e-01 -0.068 0.0979 0.334 B_Activated L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 1.73e-02 0.227 0.0942 0.334 B_Activated L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 8.47e-01 -0.0175 0.0907 0.334 B_Activated L2
ENSG00000079739 PGM1 -107983 sc-eQTL 8.83e-01 0.0135 0.0913 0.348 B_Intermediate L2
ENSG00000088035 ALG6 117853 sc-eQTL 8.97e-01 -0.012 0.0928 0.348 B_Intermediate L2
ENSG00000116641 DOCK7 797042 sc-eQTL 4.08e-01 -0.0734 0.0885 0.348 B_Intermediate L2
ENSG00000125703 ATG4C 701296 sc-eQTL 4.80e-01 -0.0531 0.0749 0.348 B_Intermediate L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 2.26e-05 0.371 0.0856 0.348 B_Intermediate L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 2.34e-03 0.267 0.0866 0.348 B_Intermediate L2
ENSG00000079739 PGM1 -107983 sc-eQTL 4.14e-02 0.184 0.0895 0.351 B_Memory L2
ENSG00000088035 ALG6 117853 sc-eQTL 7.71e-01 0.0268 0.0919 0.351 B_Memory L2
ENSG00000116641 DOCK7 797042 sc-eQTL 4.49e-02 0.172 0.0854 0.351 B_Memory L2
ENSG00000125703 ATG4C 701296 sc-eQTL 5.14e-01 -0.0535 0.0819 0.351 B_Memory L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 9.28e-04 0.307 0.0914 0.351 B_Memory L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 1.94e-02 0.217 0.0919 0.351 B_Memory L2
ENSG00000079739 PGM1 -107983 sc-eQTL 3.46e-02 0.194 0.0912 0.348 B_Naive1 L2
ENSG00000088035 ALG6 117853 sc-eQTL 7.60e-01 -0.0283 0.0925 0.348 B_Naive1 L2
ENSG00000116641 DOCK7 797042 sc-eQTL 7.19e-01 -0.0319 0.0886 0.348 B_Naive1 L2
ENSG00000125703 ATG4C 701296 sc-eQTL 5.88e-01 0.037 0.0682 0.348 B_Naive1 L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 2.22e-14 0.647 0.0789 0.348 B_Naive1 L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 4.68e-06 0.432 0.0919 0.348 B_Naive1 L2
ENSG00000079739 PGM1 -107983 sc-eQTL 6.77e-02 0.164 0.0893 0.35 B_Naive2 L2
ENSG00000088035 ALG6 117853 sc-eQTL 7.41e-01 -0.031 0.0938 0.35 B_Naive2 L2
ENSG00000116641 DOCK7 797042 sc-eQTL 8.36e-01 -0.0187 0.0902 0.35 B_Naive2 L2
ENSG00000125703 ATG4C 701296 sc-eQTL 5.26e-01 -0.0551 0.0868 0.35 B_Naive2 L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 1.19e-11 0.606 0.0844 0.35 B_Naive2 L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 1.03e-01 -0.152 0.0931 0.35 B_Naive2 L2
ENSG00000079739 PGM1 -107983 sc-eQTL 8.08e-01 -0.022 0.0905 0.348 CD4_CTL L2
ENSG00000088035 ALG6 117853 sc-eQTL 5.21e-01 0.0614 0.0955 0.348 CD4_CTL L2
ENSG00000116641 DOCK7 797042 sc-eQTL 8.97e-01 0.0108 0.0836 0.348 CD4_CTL L2
ENSG00000125703 ATG4C 701296 sc-eQTL 5.94e-01 0.0462 0.0865 0.348 CD4_CTL L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 2.58e-01 0.105 0.0922 0.348 CD4_CTL L2
ENSG00000158966 CACHD1 -984701 sc-eQTL 7.01e-01 -0.0129 0.0336 0.348 CD4_CTL L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 8.27e-01 0.0192 0.0879 0.348 CD4_CTL L2
ENSG00000079739 PGM1 -107983 sc-eQTL 8.52e-01 0.014 0.0752 0.348 CD4_Naive L2
ENSG00000088035 ALG6 117853 sc-eQTL 9.30e-03 -0.211 0.0804 0.348 CD4_Naive L2
ENSG00000116641 DOCK7 797042 sc-eQTL 6.34e-01 -0.0383 0.0802 0.348 CD4_Naive L2
ENSG00000125703 ATG4C 701296 sc-eQTL 7.80e-01 -0.0198 0.0709 0.348 CD4_Naive L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 4.47e-13 0.591 0.0765 0.348 CD4_Naive L2
ENSG00000158966 CACHD1 -984701 sc-eQTL 3.35e-01 -0.0496 0.0512 0.348 CD4_Naive L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 5.78e-02 0.163 0.0854 0.348 CD4_Naive L2
ENSG00000079739 PGM1 -107983 sc-eQTL 4.45e-02 0.155 0.0767 0.348 CD4_TCM L2
ENSG00000088035 ALG6 117853 sc-eQTL 9.27e-01 0.00828 0.0899 0.348 CD4_TCM L2
ENSG00000116641 DOCK7 797042 sc-eQTL 7.35e-01 0.027 0.0796 0.348 CD4_TCM L2
ENSG00000125703 ATG4C 701296 sc-eQTL 1.58e-01 0.109 0.0772 0.348 CD4_TCM L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 8.11e-08 0.475 0.0854 0.348 CD4_TCM L2
ENSG00000158966 CACHD1 -984701 sc-eQTL 7.44e-02 -0.129 0.0719 0.348 CD4_TCM L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 1.11e-04 0.336 0.0854 0.348 CD4_TCM L2
ENSG00000079739 PGM1 -107983 sc-eQTL 3.17e-01 -0.091 0.0907 0.348 CD4_TEM L2
ENSG00000088035 ALG6 117853 sc-eQTL 3.77e-01 -0.0808 0.0912 0.348 CD4_TEM L2
ENSG00000116641 DOCK7 797042 sc-eQTL 4.78e-01 -0.0633 0.089 0.348 CD4_TEM L2
ENSG00000125703 ATG4C 701296 sc-eQTL 5.62e-01 -0.0502 0.0864 0.348 CD4_TEM L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 5.72e-04 0.304 0.0868 0.348 CD4_TEM L2
ENSG00000158966 CACHD1 -984701 sc-eQTL 9.97e-01 0.000197 0.0552 0.348 CD4_TEM L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 1.48e-01 0.134 0.0921 0.348 CD4_TEM L2
ENSG00000079739 PGM1 -107983 sc-eQTL 7.61e-01 -0.0253 0.0829 0.348 CD8_CTL L2
ENSG00000088035 ALG6 117853 sc-eQTL 5.44e-01 -0.0535 0.0881 0.348 CD8_CTL L2
ENSG00000116641 DOCK7 797042 sc-eQTL 7.18e-01 0.0302 0.0836 0.348 CD8_CTL L2
ENSG00000125703 ATG4C 701296 sc-eQTL 2.97e-01 -0.0929 0.0888 0.348 CD8_CTL L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 3.12e-03 0.271 0.0907 0.348 CD8_CTL L2
ENSG00000158966 CACHD1 -984701 sc-eQTL 3.90e-02 -0.0807 0.0388 0.348 CD8_CTL L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 9.23e-01 0.00914 0.0948 0.348 CD8_CTL L2
ENSG00000079739 PGM1 -107983 sc-eQTL 3.49e-01 0.079 0.0842 0.348 CD8_Naive L2
ENSG00000088035 ALG6 117853 sc-eQTL 2.66e-01 -0.097 0.087 0.348 CD8_Naive L2
ENSG00000116641 DOCK7 797042 sc-eQTL 8.44e-01 -0.0178 0.0902 0.348 CD8_Naive L2
ENSG00000125703 ATG4C 701296 sc-eQTL 9.01e-01 0.0108 0.0866 0.348 CD8_Naive L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 8.52e-11 0.543 0.0794 0.348 CD8_Naive L2
ENSG00000158966 CACHD1 -984701 sc-eQTL 4.44e-02 -0.122 0.0602 0.348 CD8_Naive L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 6.64e-03 0.223 0.0813 0.348 CD8_Naive L2
ENSG00000079739 PGM1 -107983 sc-eQTL 2.16e-01 0.111 0.0898 0.345 CD8_TCM L2
ENSG00000088035 ALG6 117853 sc-eQTL 1.37e-01 0.136 0.0908 0.345 CD8_TCM L2
ENSG00000116641 DOCK7 797042 sc-eQTL 7.32e-01 0.0305 0.0891 0.345 CD8_TCM L2
ENSG00000125703 ATG4C 701296 sc-eQTL 6.06e-01 0.0471 0.0911 0.345 CD8_TCM L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 1.06e-03 0.286 0.0861 0.345 CD8_TCM L2
ENSG00000158966 CACHD1 -984701 sc-eQTL 7.28e-01 -0.0162 0.0465 0.345 CD8_TCM L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 2.75e-01 0.0985 0.09 0.345 CD8_TCM L2
ENSG00000079739 PGM1 -107983 sc-eQTL 2.87e-01 0.0995 0.0932 0.356 CD8_TEM L2
ENSG00000088035 ALG6 117853 sc-eQTL 9.65e-01 0.00414 0.0938 0.356 CD8_TEM L2
ENSG00000116641 DOCK7 797042 sc-eQTL 4.49e-01 0.0689 0.0908 0.356 CD8_TEM L2
ENSG00000125703 ATG4C 701296 sc-eQTL 1.22e-01 -0.135 0.0869 0.356 CD8_TEM L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 6.52e-04 0.318 0.0919 0.356 CD8_TEM L2
ENSG00000158966 CACHD1 -984701 sc-eQTL 6.70e-01 -0.00822 0.0193 0.356 CD8_TEM L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 3.51e-01 0.0856 0.0916 0.356 CD8_TEM L2
ENSG00000079739 PGM1 -107983 sc-eQTL 8.11e-01 -0.0213 0.089 0.348 MAIT L2
ENSG00000088035 ALG6 117853 sc-eQTL 7.79e-01 0.0247 0.0881 0.348 MAIT L2
ENSG00000116641 DOCK7 797042 sc-eQTL 9.45e-01 -0.00583 0.0844 0.348 MAIT L2
ENSG00000125703 ATG4C 701296 sc-eQTL 1.13e-01 -0.141 0.0885 0.348 MAIT L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 2.73e-03 0.265 0.0872 0.348 MAIT L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 3.53e-01 0.0852 0.0916 0.348 MAIT L2
ENSG00000079739 PGM1 -107983 sc-eQTL 9.80e-01 -0.00219 0.088 0.344 NK_CD56bright L2
ENSG00000088035 ALG6 117853 sc-eQTL 5.35e-02 -0.173 0.0893 0.344 NK_CD56bright L2
ENSG00000116641 DOCK7 797042 sc-eQTL 9.74e-01 -0.00254 0.0781 0.344 NK_CD56bright L2
ENSG00000125703 ATG4C 701296 sc-eQTL 8.41e-01 0.0176 0.0873 0.344 NK_CD56bright L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 4.75e-02 0.179 0.09 0.344 NK_CD56bright L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 9.12e-02 0.151 0.089 0.344 NK_CD56bright L2
ENSG00000079739 PGM1 -107983 sc-eQTL 8.51e-01 0.0131 0.0696 0.347 NK_CD56dim L2
ENSG00000088035 ALG6 117853 sc-eQTL 6.71e-01 -0.0375 0.0882 0.347 NK_CD56dim L2
ENSG00000116641 DOCK7 797042 sc-eQTL 4.57e-01 0.0571 0.0767 0.347 NK_CD56dim L2
ENSG00000125703 ATG4C 701296 sc-eQTL 1.31e-01 0.117 0.0776 0.347 NK_CD56dim L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 2.05e-02 0.205 0.0876 0.347 NK_CD56dim L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 6.09e-01 -0.0491 0.0958 0.347 NK_CD56dim L2
ENSG00000079739 PGM1 -107983 sc-eQTL 3.80e-01 0.084 0.0954 0.338 NK_HLA L2
ENSG00000088035 ALG6 117853 sc-eQTL 2.47e-01 -0.115 0.0988 0.338 NK_HLA L2
ENSG00000116641 DOCK7 797042 sc-eQTL 8.17e-01 -0.0176 0.0758 0.338 NK_HLA L2
ENSG00000125703 ATG4C 701296 sc-eQTL 8.90e-01 0.0122 0.0882 0.338 NK_HLA L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 2.40e-02 0.208 0.0914 0.338 NK_HLA L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 4.98e-01 -0.0598 0.0881 0.338 NK_HLA L2
ENSG00000079739 PGM1 -107983 sc-eQTL 4.11e-01 -0.0622 0.0756 0.347 NK_cytokine L2
ENSG00000088035 ALG6 117853 sc-eQTL 8.24e-01 -0.0191 0.0855 0.347 NK_cytokine L2
ENSG00000116641 DOCK7 797042 sc-eQTL 7.46e-01 -0.0257 0.0792 0.347 NK_cytokine L2
ENSG00000125703 ATG4C 701296 sc-eQTL 5.13e-01 -0.0531 0.081 0.347 NK_cytokine L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 1.68e-03 0.261 0.082 0.347 NK_cytokine L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 3.36e-01 -0.0861 0.0893 0.347 NK_cytokine L2
ENSG00000079739 PGM1 -107983 sc-eQTL 1.65e-01 0.167 0.119 0.356 PB L2
ENSG00000088035 ALG6 117853 sc-eQTL 4.91e-01 -0.0871 0.126 0.356 PB L2
ENSG00000116641 DOCK7 797042 sc-eQTL 7.14e-01 -0.0496 0.135 0.356 PB L2
ENSG00000125703 ATG4C 701296 sc-eQTL 8.53e-01 -0.0219 0.118 0.356 PB L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 8.15e-03 0.307 0.114 0.356 PB L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 4.93e-03 0.357 0.125 0.356 PB L2
ENSG00000079739 PGM1 -107983 sc-eQTL 7.86e-02 0.146 0.0828 0.35 Pro_T L2
ENSG00000088035 ALG6 117853 sc-eQTL 4.86e-01 -0.0592 0.0848 0.35 Pro_T L2
ENSG00000116641 DOCK7 797042 sc-eQTL 6.82e-02 0.155 0.0845 0.35 Pro_T L2
ENSG00000125703 ATG4C 701296 sc-eQTL 5.48e-02 0.143 0.0739 0.35 Pro_T L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 1.29e-04 -0.282 0.0722 0.35 Pro_T L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 4.52e-01 -0.0653 0.0868 0.35 Pro_T L2
ENSG00000079739 PGM1 -107983 sc-eQTL 2.89e-01 0.0932 0.0876 0.348 Treg L2
ENSG00000088035 ALG6 117853 sc-eQTL 3.48e-01 -0.0883 0.0938 0.348 Treg L2
ENSG00000116641 DOCK7 797042 sc-eQTL 9.11e-01 -0.00967 0.0863 0.348 Treg L2
ENSG00000125703 ATG4C 701296 sc-eQTL 9.65e-02 -0.146 0.0876 0.348 Treg L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 1.50e-01 0.133 0.0918 0.348 Treg L2
ENSG00000158966 CACHD1 -984701 sc-eQTL 3.70e-02 0.145 0.069 0.348 Treg L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 1.81e-01 0.118 0.0879 0.348 Treg L2
ENSG00000079739 PGM1 -107983 sc-eQTL 6.42e-01 0.041 0.0881 0.337 cDC L2
ENSG00000088035 ALG6 117853 sc-eQTL 8.03e-01 -0.0224 0.0894 0.337 cDC L2
ENSG00000116641 DOCK7 797042 sc-eQTL 9.80e-01 0.00222 0.0877 0.337 cDC L2
ENSG00000125703 ATG4C 701296 sc-eQTL 8.40e-02 0.131 0.0756 0.337 cDC L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 3.66e-04 0.339 0.0932 0.337 cDC L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 5.06e-01 0.0516 0.0775 0.337 cDC L2
ENSG00000079739 PGM1 -107983 sc-eQTL 5.45e-02 -0.159 0.0824 0.348 cMono_IL1B L2
ENSG00000088035 ALG6 117853 sc-eQTL 1.53e-01 -0.119 0.0828 0.348 cMono_IL1B L2
ENSG00000116641 DOCK7 797042 sc-eQTL 4.03e-01 0.0734 0.0876 0.348 cMono_IL1B L2
ENSG00000125703 ATG4C 701296 sc-eQTL 9.76e-01 0.00188 0.0617 0.348 cMono_IL1B L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 1.37e-06 0.411 0.0826 0.348 cMono_IL1B L2
ENSG00000079739 PGM1 -107983 sc-eQTL 5.01e-01 0.0621 0.0921 0.348 cMono_S100A L2
ENSG00000088035 ALG6 117853 sc-eQTL 7.48e-02 -0.166 0.0927 0.348 cMono_S100A L2
ENSG00000116641 DOCK7 797042 sc-eQTL 5.45e-01 -0.0524 0.0865 0.348 cMono_S100A L2
ENSG00000125703 ATG4C 701296 sc-eQTL 2.99e-01 -0.0778 0.0748 0.348 cMono_S100A L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 1.28e-02 0.209 0.0834 0.348 cMono_S100A L2
ENSG00000079739 PGM1 -107983 sc-eQTL 8.88e-01 0.0133 0.0941 0.336 gdT L2
ENSG00000088035 ALG6 117853 sc-eQTL 9.74e-01 -0.00333 0.1 0.336 gdT L2
ENSG00000116641 DOCK7 797042 sc-eQTL 6.92e-01 -0.039 0.0983 0.336 gdT L2
ENSG00000125703 ATG4C 701296 sc-eQTL 3.28e-01 -0.0919 0.0937 0.336 gdT L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 5.42e-01 0.0609 0.0997 0.336 gdT L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 8.97e-01 0.0127 0.0982 0.336 gdT L2
ENSG00000079739 PGM1 -107983 sc-eQTL 1.87e-01 -0.122 0.0921 0.347 intMono L2
ENSG00000088035 ALG6 117853 sc-eQTL 6.19e-01 -0.0429 0.0861 0.347 intMono L2
ENSG00000116641 DOCK7 797042 sc-eQTL 5.39e-01 -0.0541 0.0879 0.347 intMono L2
ENSG00000125703 ATG4C 701296 sc-eQTL 8.37e-01 -0.0173 0.084 0.347 intMono L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 8.65e-04 0.305 0.09 0.347 intMono L2
ENSG00000079739 PGM1 -107983 sc-eQTL 4.30e-01 0.0661 0.0836 0.346 ncMono L2
ENSG00000088035 ALG6 117853 sc-eQTL 5.69e-01 -0.0524 0.0919 0.346 ncMono L2
ENSG00000116641 DOCK7 797042 sc-eQTL 1.72e-01 0.123 0.0901 0.346 ncMono L2
ENSG00000125703 ATG4C 701296 sc-eQTL 6.44e-01 0.0392 0.0845 0.346 ncMono L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 6.96e-01 0.0346 0.0884 0.346 ncMono L2
ENSG00000079739 PGM1 -107983 sc-eQTL 9.86e-01 0.0018 0.0999 0.342 pDC L2
ENSG00000088035 ALG6 117853 sc-eQTL 1.16e-01 -0.153 0.0965 0.342 pDC L2
ENSG00000116641 DOCK7 797042 sc-eQTL 8.22e-01 0.0224 0.0994 0.342 pDC L2
ENSG00000125703 ATG4C 701296 sc-eQTL 2.44e-01 -0.104 0.0888 0.342 pDC L2
ENSG00000142856 ITGB3BP -108293 sc-eQTL 2.67e-01 0.111 0.0997 0.342 pDC L2
ENSG00000203965 EFCAB7 -37944 sc-eQTL 3.12e-02 0.19 0.0873 0.342 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -107983 sc-eQTL 4.55e-02 0.172 0.0855 0.348 B_Memory LOneK1K
ENSG00000088035 ALG6 117853 sc-eQTL 9.67e-01 0.00391 0.0955 0.348 B_Memory LOneK1K
ENSG00000116641 DOCK7 797042 sc-eQTL 9.65e-01 0.00361 0.0829 0.348 B_Memory LOneK1K
ENSG00000125703 ATG4C 701296 sc-eQTL 4.54e-01 -0.0502 0.0669 0.348 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -108293 sc-eQTL 2.95e-08 0.471 0.0818 0.348 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -37944 sc-eQTL 1.04e-04 0.35 0.0885 0.348 B_Memory LOneK1K
ENSG00000079739 PGM1 -107983 sc-eQTL 5.11e-03 0.249 0.088 0.348 B_Naive LOneK1K
ENSG00000088035 ALG6 117853 sc-eQTL 4.92e-01 -0.0635 0.0923 0.348 B_Naive LOneK1K
ENSG00000116641 DOCK7 797042 sc-eQTL 9.85e-01 -0.00162 0.0862 0.348 B_Naive LOneK1K
ENSG00000125703 ATG4C 701296 sc-eQTL 8.53e-01 0.0122 0.0658 0.348 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -108293 sc-eQTL 2.48e-20 0.78 0.076 0.348 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -37944 sc-eQTL 3.47e-03 0.271 0.0916 0.348 B_Naive LOneK1K
ENSG00000079739 PGM1 -107983 sc-eQTL 4.22e-01 -0.0681 0.0847 0.348 CD14_Mono LOneK1K
ENSG00000088035 ALG6 117853 sc-eQTL 2.63e-02 -0.182 0.0812 0.348 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 797042 sc-eQTL 5.14e-01 0.054 0.0826 0.348 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 701296 sc-eQTL 4.82e-01 -0.0402 0.0571 0.348 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -108293 sc-eQTL 2.80e-06 0.387 0.0803 0.348 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -107983 sc-eQTL 7.41e-01 -0.0268 0.081 0.347 CD16_Mono LOneK1K
ENSG00000088035 ALG6 117853 sc-eQTL 2.60e-01 -0.103 0.0917 0.347 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 797042 sc-eQTL 9.92e-01 0.000867 0.091 0.347 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 701296 sc-eQTL 3.35e-01 0.0748 0.0774 0.347 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -108293 sc-eQTL 3.87e-02 0.186 0.0892 0.347 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -107983 sc-eQTL 6.71e-01 0.0289 0.0679 0.347 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 117853 sc-eQTL 3.64e-01 -0.0741 0.0815 0.347 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 797042 sc-eQTL 9.20e-01 0.00736 0.0731 0.347 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 701296 sc-eQTL 6.50e-01 0.0331 0.073 0.347 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -108293 sc-eQTL 1.14e-04 0.328 0.0835 0.347 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -37944 sc-eQTL 5.43e-01 -0.0582 0.0955 0.347 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000088035 ALG6 117853 eQTL 3.69e-11 -0.09 0.0134 0.00146 0.00165 0.359
ENSG00000116652 DLEU2L -61654 eQTL 0.00281 0.0802 0.0268 0.00235 0.00129 0.359
ENSG00000142856 ITGB3BP -108293 eQTL 2.7100000000000004e-37 0.372 0.0279 0.00145 0.0136 0.359
ENSG00000203965 EFCAB7 -37944 eQTL 1.30e-04 0.095 0.0247 0.0 0.0 0.359
ENSG00000230798 FOXD3-AS1 160987 eQTL 0.0168 -0.0646 0.027 0.0 0.0 0.359

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000088035 ALG6 117853 0.000151 8.55e-05 1.6e-05 2.71e-05 9.47e-06 3.91e-05 8.08e-05 8.21e-06 6.93e-05 2.37e-05 0.0001 3.86e-05 0.000109 2.36e-05 1.1e-05 4.6e-05 4.22e-05 4.84e-05 1.64e-05 1.09e-05 1.97e-05 8.95e-05 8.13e-05 2.12e-05 0.000101 2.23e-05 3.64e-05 1.99e-05 9.51e-05 3.44e-05 4.03e-05 1.68e-06 3.06e-06 1.35e-05 1.37e-05 7.56e-06 3.22e-06 3.75e-06 7.16e-06 3.08e-06 1.7e-06 9.96e-05 1.2e-05 4.11e-07 5.4e-06 1e-05 8.87e-06 2.8e-06 1.5e-06
ENSG00000142856 ITGB3BP -108293 0.000163 0.000104 1.82e-05 3.1e-05 1.07e-05 4.54e-05 9.17e-05 9.91e-06 7.88e-05 2.72e-05 0.000113 4.34e-05 0.000122 2.77e-05 1.26e-05 5.51e-05 4.69e-05 5.73e-05 1.88e-05 1.25e-05 2.26e-05 0.000102 9.51e-05 2.44e-05 0.000116 2.63e-05 4.08e-05 2.33e-05 0.000106 3.74e-05 4.65e-05 1.95e-06 3.8e-06 1.54e-05 1.56e-05 8.02e-06 3.64e-06 4.02e-06 7.95e-06 3.35e-06 1.7e-06 0.000117 1.44e-05 4.49e-07 6.1e-06 1.15e-05 1.01e-05 3.14e-06 1.56e-06