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Genes within 1Mb (chr1:63471034:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -122377 sc-eQTL 1.64e-01 0.102 0.0733 0.412 B L1
ENSG00000088035 ALG6 103459 sc-eQTL 7.15e-01 0.0279 0.0763 0.412 B L1
ENSG00000116641 DOCK7 782648 sc-eQTL 3.77e-01 -0.0675 0.0762 0.412 B L1
ENSG00000125703 ATG4C 686902 sc-eQTL 4.53e-01 -0.0399 0.053 0.412 B L1
ENSG00000142856 ITGB3BP -122687 sc-eQTL 2.57e-07 -0.422 0.0793 0.412 B L1
ENSG00000203965 EFCAB7 -52338 sc-eQTL 4.68e-05 -0.346 0.0832 0.412 B L1
ENSG00000079739 PGM1 -122377 sc-eQTL 2.81e-01 0.0682 0.0631 0.412 CD4T L1
ENSG00000088035 ALG6 103459 sc-eQTL 3.29e-01 0.0682 0.0697 0.412 CD4T L1
ENSG00000116641 DOCK7 782648 sc-eQTL 7.89e-01 -0.0189 0.0707 0.412 CD4T L1
ENSG00000125703 ATG4C 686902 sc-eQTL 8.16e-01 0.0133 0.0571 0.412 CD4T L1
ENSG00000142856 ITGB3BP -122687 sc-eQTL 3.74e-08 -0.431 0.0754 0.412 CD4T L1
ENSG00000158966 CACHD1 -999095 sc-eQTL 1.82e-01 0.0645 0.0482 0.412 CD4T L1
ENSG00000203965 EFCAB7 -52338 sc-eQTL 2.24e-03 -0.22 0.0712 0.412 CD4T L1
ENSG00000079739 PGM1 -122377 sc-eQTL 9.53e-01 -0.00411 0.07 0.412 CD8T L1
ENSG00000088035 ALG6 103459 sc-eQTL 9.68e-01 -0.00309 0.0771 0.412 CD8T L1
ENSG00000116641 DOCK7 782648 sc-eQTL 7.14e-01 -0.0286 0.0781 0.412 CD8T L1
ENSG00000125703 ATG4C 686902 sc-eQTL 7.35e-01 0.0252 0.0742 0.412 CD8T L1
ENSG00000142856 ITGB3BP -122687 sc-eQTL 4.57e-09 -0.468 0.0765 0.412 CD8T L1
ENSG00000158966 CACHD1 -999095 sc-eQTL 2.22e-01 0.0512 0.0418 0.412 CD8T L1
ENSG00000203965 EFCAB7 -52338 sc-eQTL 1.18e-04 -0.313 0.0799 0.412 CD8T L1
ENSG00000079739 PGM1 -122377 sc-eQTL 2.40e-01 0.0907 0.0769 0.412 DC L1
ENSG00000088035 ALG6 103459 sc-eQTL 2.60e-01 0.0897 0.0794 0.412 DC L1
ENSG00000116641 DOCK7 782648 sc-eQTL 8.79e-01 0.0125 0.0816 0.412 DC L1
ENSG00000125703 ATG4C 686902 sc-eQTL 5.91e-01 -0.0343 0.0638 0.412 DC L1
ENSG00000142856 ITGB3BP -122687 sc-eQTL 6.91e-01 -0.0355 0.0892 0.412 DC L1
ENSG00000203965 EFCAB7 -52338 sc-eQTL 2.10e-01 -0.0973 0.0774 0.412 DC L1
ENSG00000079739 PGM1 -122377 sc-eQTL 4.88e-01 0.0526 0.0757 0.412 Mono L1
ENSG00000088035 ALG6 103459 sc-eQTL 5.89e-01 0.0427 0.079 0.412 Mono L1
ENSG00000116641 DOCK7 782648 sc-eQTL 9.47e-02 -0.127 0.0759 0.412 Mono L1
ENSG00000125703 ATG4C 686902 sc-eQTL 4.78e-01 0.0367 0.0516 0.412 Mono L1
ENSG00000142856 ITGB3BP -122687 sc-eQTL 3.52e-04 -0.288 0.0792 0.412 Mono L1
ENSG00000079739 PGM1 -122377 sc-eQTL 6.33e-01 0.0308 0.0645 0.412 NK L1
ENSG00000088035 ALG6 103459 sc-eQTL 1.08e-01 0.121 0.0752 0.412 NK L1
ENSG00000116641 DOCK7 782648 sc-eQTL 3.76e-01 0.0551 0.0622 0.412 NK L1
ENSG00000125703 ATG4C 686902 sc-eQTL 7.25e-01 -0.0236 0.0669 0.412 NK L1
ENSG00000142856 ITGB3BP -122687 sc-eQTL 4.83e-04 -0.286 0.0808 0.412 NK L1
ENSG00000203965 EFCAB7 -52338 sc-eQTL 2.40e-01 -0.106 0.09 0.412 NK L1
ENSG00000079739 PGM1 -122377 sc-eQTL 3.40e-01 -0.0705 0.0737 0.412 Other_T L1
ENSG00000088035 ALG6 103459 sc-eQTL 7.12e-01 -0.0274 0.0742 0.412 Other_T L1
ENSG00000116641 DOCK7 782648 sc-eQTL 8.54e-01 0.0139 0.0758 0.412 Other_T L1
ENSG00000125703 ATG4C 686902 sc-eQTL 2.01e-02 0.152 0.0647 0.412 Other_T L1
ENSG00000142856 ITGB3BP -122687 sc-eQTL 2.66e-02 -0.128 0.0575 0.412 Other_T L1
ENSG00000203965 EFCAB7 -52338 sc-eQTL 2.38e-01 -0.106 0.0894 0.412 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -122377 sc-eQTL 3.81e-01 0.0874 0.0997 0.413 B_Activated L2
ENSG00000088035 ALG6 103459 sc-eQTL 1.63e-01 0.133 0.0952 0.413 B_Activated L2
ENSG00000116641 DOCK7 782648 sc-eQTL 2.95e-01 0.0933 0.0888 0.413 B_Activated L2
ENSG00000125703 ATG4C 686902 sc-eQTL 5.53e-01 0.0556 0.0936 0.413 B_Activated L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 5.73e-02 -0.173 0.0906 0.413 B_Activated L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 2.41e-01 -0.102 0.0863 0.413 B_Activated L2
ENSG00000079739 PGM1 -122377 sc-eQTL 3.48e-01 0.0815 0.0866 0.414 B_Intermediate L2
ENSG00000088035 ALG6 103459 sc-eQTL 3.10e-01 -0.0895 0.0879 0.414 B_Intermediate L2
ENSG00000116641 DOCK7 782648 sc-eQTL 7.02e-01 0.0322 0.0842 0.414 B_Intermediate L2
ENSG00000125703 ATG4C 686902 sc-eQTL 6.12e-02 0.133 0.0707 0.414 B_Intermediate L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 6.69e-03 -0.228 0.0834 0.414 B_Intermediate L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 1.07e-03 -0.272 0.082 0.414 B_Intermediate L2
ENSG00000079739 PGM1 -122377 sc-eQTL 8.14e-01 -0.0202 0.0858 0.412 B_Memory L2
ENSG00000088035 ALG6 103459 sc-eQTL 6.19e-01 0.0434 0.0872 0.412 B_Memory L2
ENSG00000116641 DOCK7 782648 sc-eQTL 9.79e-02 -0.135 0.0813 0.412 B_Memory L2
ENSG00000125703 ATG4C 686902 sc-eQTL 8.16e-01 -0.0181 0.0777 0.412 B_Memory L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 7.69e-02 -0.157 0.0883 0.412 B_Memory L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 2.20e-02 -0.201 0.0872 0.412 B_Memory L2
ENSG00000079739 PGM1 -122377 sc-eQTL 1.83e-01 0.117 0.0873 0.412 B_Naive1 L2
ENSG00000088035 ALG6 103459 sc-eQTL 9.33e-01 -0.00738 0.088 0.412 B_Naive1 L2
ENSG00000116641 DOCK7 782648 sc-eQTL 9.70e-01 0.00321 0.0843 0.412 B_Naive1 L2
ENSG00000125703 ATG4C 686902 sc-eQTL 9.44e-01 -0.00453 0.0649 0.412 B_Naive1 L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 6.75e-06 -0.379 0.0821 0.412 B_Naive1 L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 1.68e-03 -0.286 0.0898 0.412 B_Naive1 L2
ENSG00000079739 PGM1 -122377 sc-eQTL 4.15e-01 0.0706 0.0865 0.412 B_Naive2 L2
ENSG00000088035 ALG6 103459 sc-eQTL 4.59e-01 0.0669 0.0902 0.412 B_Naive2 L2
ENSG00000116641 DOCK7 782648 sc-eQTL 8.80e-01 -0.0131 0.0869 0.412 B_Naive2 L2
ENSG00000125703 ATG4C 686902 sc-eQTL 2.56e-01 -0.0949 0.0834 0.412 B_Naive2 L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 7.68e-06 -0.397 0.0864 0.412 B_Naive2 L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 1.79e-01 0.121 0.0898 0.412 B_Naive2 L2
ENSG00000079739 PGM1 -122377 sc-eQTL 7.50e-01 -0.0276 0.0865 0.409 CD4_CTL L2
ENSG00000088035 ALG6 103459 sc-eQTL 6.19e-01 -0.0456 0.0914 0.409 CD4_CTL L2
ENSG00000116641 DOCK7 782648 sc-eQTL 4.39e-01 0.062 0.0799 0.409 CD4_CTL L2
ENSG00000125703 ATG4C 686902 sc-eQTL 8.99e-01 0.0106 0.0828 0.409 CD4_CTL L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 5.42e-01 -0.0541 0.0884 0.409 CD4_CTL L2
ENSG00000158966 CACHD1 -999095 sc-eQTL 8.56e-01 -0.00583 0.0322 0.409 CD4_CTL L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 9.38e-01 0.00655 0.0841 0.409 CD4_CTL L2
ENSG00000079739 PGM1 -122377 sc-eQTL 2.53e-01 0.0809 0.0706 0.412 CD4_Naive L2
ENSG00000088035 ALG6 103459 sc-eQTL 4.20e-01 0.062 0.0768 0.412 CD4_Naive L2
ENSG00000116641 DOCK7 782648 sc-eQTL 8.82e-01 -0.0112 0.0756 0.412 CD4_Naive L2
ENSG00000125703 ATG4C 686902 sc-eQTL 6.92e-01 0.0265 0.0668 0.412 CD4_Naive L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 1.73e-07 -0.414 0.0765 0.412 CD4_Naive L2
ENSG00000158966 CACHD1 -999095 sc-eQTL 1.99e-01 0.0621 0.0482 0.412 CD4_Naive L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 2.94e-02 -0.176 0.0802 0.412 CD4_Naive L2
ENSG00000079739 PGM1 -122377 sc-eQTL 9.35e-01 -0.00605 0.0741 0.412 CD4_TCM L2
ENSG00000088035 ALG6 103459 sc-eQTL 9.20e-01 0.0086 0.086 0.412 CD4_TCM L2
ENSG00000116641 DOCK7 782648 sc-eQTL 1.83e-01 -0.101 0.0759 0.412 CD4_TCM L2
ENSG00000125703 ATG4C 686902 sc-eQTL 1.46e-01 -0.108 0.0739 0.412 CD4_TCM L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 1.61e-04 -0.325 0.0846 0.412 CD4_TCM L2
ENSG00000158966 CACHD1 -999095 sc-eQTL 1.78e-01 0.0933 0.069 0.412 CD4_TCM L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 3.10e-03 -0.248 0.0829 0.412 CD4_TCM L2
ENSG00000079739 PGM1 -122377 sc-eQTL 6.09e-03 0.236 0.0852 0.412 CD4_TEM L2
ENSG00000088035 ALG6 103459 sc-eQTL 7.74e-01 0.0251 0.0872 0.412 CD4_TEM L2
ENSG00000116641 DOCK7 782648 sc-eQTL 6.90e-01 0.0339 0.085 0.412 CD4_TEM L2
ENSG00000125703 ATG4C 686902 sc-eQTL 2.55e-01 0.0939 0.0823 0.412 CD4_TEM L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 7.13e-03 -0.228 0.0838 0.412 CD4_TEM L2
ENSG00000158966 CACHD1 -999095 sc-eQTL 6.65e-01 0.0229 0.0527 0.412 CD4_TEM L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 1.22e-01 -0.136 0.0878 0.412 CD4_TEM L2
ENSG00000079739 PGM1 -122377 sc-eQTL 9.92e-01 0.00078 0.0792 0.412 CD8_CTL L2
ENSG00000088035 ALG6 103459 sc-eQTL 5.38e-01 -0.0519 0.0841 0.412 CD8_CTL L2
ENSG00000116641 DOCK7 782648 sc-eQTL 5.10e-01 -0.0527 0.0798 0.412 CD8_CTL L2
ENSG00000125703 ATG4C 686902 sc-eQTL 8.55e-02 0.146 0.0844 0.412 CD8_CTL L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 3.11e-02 -0.19 0.0874 0.412 CD8_CTL L2
ENSG00000158966 CACHD1 -999095 sc-eQTL 5.20e-01 -0.0241 0.0374 0.412 CD8_CTL L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 1.98e-01 -0.116 0.0902 0.412 CD8_CTL L2
ENSG00000079739 PGM1 -122377 sc-eQTL 2.10e-01 0.101 0.0801 0.412 CD8_Naive L2
ENSG00000088035 ALG6 103459 sc-eQTL 6.97e-01 0.0325 0.0832 0.412 CD8_Naive L2
ENSG00000116641 DOCK7 782648 sc-eQTL 8.42e-01 -0.0172 0.0861 0.412 CD8_Naive L2
ENSG00000125703 ATG4C 686902 sc-eQTL 6.93e-01 -0.0326 0.0826 0.412 CD8_Naive L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 1.10e-07 -0.43 0.0782 0.412 CD8_Naive L2
ENSG00000158966 CACHD1 -999095 sc-eQTL 6.21e-01 0.0287 0.058 0.412 CD8_Naive L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 3.66e-02 -0.164 0.0781 0.412 CD8_Naive L2
ENSG00000079739 PGM1 -122377 sc-eQTL 9.11e-01 -0.00972 0.0872 0.414 CD8_TCM L2
ENSG00000088035 ALG6 103459 sc-eQTL 7.49e-01 -0.0283 0.0883 0.414 CD8_TCM L2
ENSG00000116641 DOCK7 782648 sc-eQTL 7.02e-01 -0.0331 0.0861 0.414 CD8_TCM L2
ENSG00000125703 ATG4C 686902 sc-eQTL 4.55e-01 -0.0658 0.088 0.414 CD8_TCM L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 1.73e-01 -0.117 0.0852 0.414 CD8_TCM L2
ENSG00000158966 CACHD1 -999095 sc-eQTL 6.84e-01 0.0183 0.045 0.414 CD8_TCM L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 1.44e-01 -0.127 0.0868 0.414 CD8_TCM L2
ENSG00000079739 PGM1 -122377 sc-eQTL 1.33e-01 -0.135 0.0896 0.4 CD8_TEM L2
ENSG00000088035 ALG6 103459 sc-eQTL 6.98e-01 0.0351 0.0905 0.4 CD8_TEM L2
ENSG00000116641 DOCK7 782648 sc-eQTL 4.29e-01 -0.0694 0.0876 0.4 CD8_TEM L2
ENSG00000125703 ATG4C 686902 sc-eQTL 5.55e-02 0.161 0.0836 0.4 CD8_TEM L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 3.26e-02 -0.194 0.0902 0.4 CD8_TEM L2
ENSG00000158966 CACHD1 -999095 sc-eQTL 8.91e-01 0.00256 0.0186 0.4 CD8_TEM L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 5.18e-02 -0.172 0.0877 0.4 CD8_TEM L2
ENSG00000079739 PGM1 -122377 sc-eQTL 5.06e-01 -0.0573 0.0861 0.411 MAIT L2
ENSG00000088035 ALG6 103459 sc-eQTL 4.44e-01 -0.0653 0.0852 0.411 MAIT L2
ENSG00000116641 DOCK7 782648 sc-eQTL 9.92e-01 -0.000844 0.0817 0.411 MAIT L2
ENSG00000125703 ATG4C 686902 sc-eQTL 5.18e-02 0.167 0.0854 0.411 MAIT L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 1.03e-02 -0.22 0.085 0.411 MAIT L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 7.47e-01 -0.0287 0.0889 0.411 MAIT L2
ENSG00000079739 PGM1 -122377 sc-eQTL 7.83e-01 0.0236 0.0855 0.411 NK_CD56bright L2
ENSG00000088035 ALG6 103459 sc-eQTL 8.94e-02 0.149 0.0871 0.411 NK_CD56bright L2
ENSG00000116641 DOCK7 782648 sc-eQTL 4.54e-01 0.0569 0.0759 0.411 NK_CD56bright L2
ENSG00000125703 ATG4C 686902 sc-eQTL 9.88e-01 0.00127 0.0849 0.411 NK_CD56bright L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 6.22e-01 -0.0437 0.0883 0.411 NK_CD56bright L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 1.22e-01 -0.134 0.0867 0.411 NK_CD56bright L2
ENSG00000079739 PGM1 -122377 sc-eQTL 7.14e-01 0.0245 0.0667 0.412 NK_CD56dim L2
ENSG00000088035 ALG6 103459 sc-eQTL 5.99e-01 0.0446 0.0845 0.412 NK_CD56dim L2
ENSG00000116641 DOCK7 782648 sc-eQTL 9.11e-01 -0.00822 0.0736 0.412 NK_CD56dim L2
ENSG00000125703 ATG4C 686902 sc-eQTL 1.88e-02 -0.175 0.0738 0.412 NK_CD56dim L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 1.54e-01 -0.121 0.0847 0.412 NK_CD56dim L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 5.09e-01 -0.0608 0.0918 0.412 NK_CD56dim L2
ENSG00000079739 PGM1 -122377 sc-eQTL 7.26e-01 -0.0322 0.0915 0.416 NK_HLA L2
ENSG00000088035 ALG6 103459 sc-eQTL 2.77e-01 0.103 0.0946 0.416 NK_HLA L2
ENSG00000116641 DOCK7 782648 sc-eQTL 6.62e-01 -0.0318 0.0726 0.416 NK_HLA L2
ENSG00000125703 ATG4C 686902 sc-eQTL 8.60e-01 0.0149 0.0844 0.416 NK_HLA L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 6.10e-02 -0.166 0.0879 0.416 NK_HLA L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 4.55e-01 0.0631 0.0843 0.416 NK_HLA L2
ENSG00000079739 PGM1 -122377 sc-eQTL 3.47e-01 0.0691 0.0733 0.412 NK_cytokine L2
ENSG00000088035 ALG6 103459 sc-eQTL 9.11e-01 0.0093 0.083 0.412 NK_cytokine L2
ENSG00000116641 DOCK7 782648 sc-eQTL 6.85e-01 0.0312 0.0769 0.412 NK_cytokine L2
ENSG00000125703 ATG4C 686902 sc-eQTL 1.19e-01 0.123 0.0782 0.412 NK_cytokine L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 2.17e-03 -0.247 0.0797 0.412 NK_cytokine L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 8.58e-01 -0.0155 0.0868 0.412 NK_cytokine L2
ENSG00000079739 PGM1 -122377 sc-eQTL 3.46e-01 -0.102 0.108 0.404 PB L2
ENSG00000088035 ALG6 103459 sc-eQTL 9.67e-01 0.00467 0.113 0.404 PB L2
ENSG00000116641 DOCK7 782648 sc-eQTL 1.70e-01 -0.166 0.12 0.404 PB L2
ENSG00000125703 ATG4C 686902 sc-eQTL 5.97e-01 0.056 0.106 0.404 PB L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 1.35e-01 -0.157 0.104 0.404 PB L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 1.60e-01 -0.163 0.115 0.404 PB L2
ENSG00000079739 PGM1 -122377 sc-eQTL 2.75e-01 -0.0877 0.0801 0.411 Pro_T L2
ENSG00000088035 ALG6 103459 sc-eQTL 6.83e-01 -0.0334 0.0817 0.411 Pro_T L2
ENSG00000116641 DOCK7 782648 sc-eQTL 3.38e-01 -0.0786 0.0819 0.411 Pro_T L2
ENSG00000125703 ATG4C 686902 sc-eQTL 2.69e-01 -0.0793 0.0716 0.411 Pro_T L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 1.13e-01 0.114 0.0716 0.411 Pro_T L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 9.89e-01 0.00115 0.0837 0.411 Pro_T L2
ENSG00000079739 PGM1 -122377 sc-eQTL 6.72e-01 -0.0358 0.0846 0.412 Treg L2
ENSG00000088035 ALG6 103459 sc-eQTL 1.53e-01 0.129 0.0901 0.412 Treg L2
ENSG00000116641 DOCK7 782648 sc-eQTL 6.40e-01 0.0389 0.083 0.412 Treg L2
ENSG00000125703 ATG4C 686902 sc-eQTL 7.59e-01 0.0261 0.0849 0.412 Treg L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 6.85e-01 0.0361 0.0888 0.412 Treg L2
ENSG00000158966 CACHD1 -999095 sc-eQTL 2.57e-02 -0.149 0.0663 0.412 Treg L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 6.61e-01 -0.0373 0.0849 0.412 Treg L2
ENSG00000079739 PGM1 -122377 sc-eQTL 7.60e-01 0.0257 0.0841 0.41 cDC L2
ENSG00000088035 ALG6 103459 sc-eQTL 4.08e-01 -0.0705 0.0851 0.41 cDC L2
ENSG00000116641 DOCK7 782648 sc-eQTL 6.03e-01 0.0435 0.0836 0.41 cDC L2
ENSG00000125703 ATG4C 686902 sc-eQTL 5.56e-01 -0.0429 0.0726 0.41 cDC L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 4.61e-01 -0.0679 0.092 0.41 cDC L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 5.02e-01 -0.0498 0.0739 0.41 cDC L2
ENSG00000079739 PGM1 -122377 sc-eQTL 2.59e-01 0.0886 0.0783 0.412 cMono_IL1B L2
ENSG00000088035 ALG6 103459 sc-eQTL 7.80e-01 0.022 0.0786 0.412 cMono_IL1B L2
ENSG00000116641 DOCK7 782648 sc-eQTL 5.27e-02 -0.16 0.0822 0.412 cMono_IL1B L2
ENSG00000125703 ATG4C 686902 sc-eQTL 9.69e-01 0.00227 0.0583 0.412 cMono_IL1B L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 4.78e-05 -0.33 0.0794 0.412 cMono_IL1B L2
ENSG00000079739 PGM1 -122377 sc-eQTL 7.93e-01 0.023 0.0875 0.412 cMono_S100A L2
ENSG00000088035 ALG6 103459 sc-eQTL 7.80e-01 -0.0248 0.0887 0.412 cMono_S100A L2
ENSG00000116641 DOCK7 782648 sc-eQTL 8.91e-01 0.0112 0.0822 0.412 cMono_S100A L2
ENSG00000125703 ATG4C 686902 sc-eQTL 8.00e-02 0.124 0.0707 0.412 cMono_S100A L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 3.40e-01 -0.0767 0.0802 0.412 cMono_S100A L2
ENSG00000079739 PGM1 -122377 sc-eQTL 5.73e-01 0.0539 0.0954 0.424 gdT L2
ENSG00000088035 ALG6 103459 sc-eQTL 9.42e-01 0.00742 0.102 0.424 gdT L2
ENSG00000116641 DOCK7 782648 sc-eQTL 1.12e-01 0.158 0.099 0.424 gdT L2
ENSG00000125703 ATG4C 686902 sc-eQTL 5.06e-01 0.0635 0.0953 0.424 gdT L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 1.43e-01 -0.148 0.101 0.424 gdT L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 6.77e-01 0.0416 0.0996 0.424 gdT L2
ENSG00000079739 PGM1 -122377 sc-eQTL 4.37e-02 0.178 0.0879 0.409 intMono L2
ENSG00000088035 ALG6 103459 sc-eQTL 3.85e-01 0.0718 0.0825 0.409 intMono L2
ENSG00000116641 DOCK7 782648 sc-eQTL 7.78e-01 0.0238 0.0844 0.409 intMono L2
ENSG00000125703 ATG4C 686902 sc-eQTL 3.82e-01 0.0705 0.0805 0.409 intMono L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 5.73e-03 -0.243 0.0871 0.409 intMono L2
ENSG00000079739 PGM1 -122377 sc-eQTL 8.59e-01 0.014 0.0784 0.412 ncMono L2
ENSG00000088035 ALG6 103459 sc-eQTL 2.37e-01 -0.102 0.0858 0.412 ncMono L2
ENSG00000116641 DOCK7 782648 sc-eQTL 1.96e-01 -0.109 0.0844 0.412 ncMono L2
ENSG00000125703 ATG4C 686902 sc-eQTL 1.69e-01 -0.109 0.0788 0.412 ncMono L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 1.64e-01 -0.115 0.0824 0.412 ncMono L2
ENSG00000079739 PGM1 -122377 sc-eQTL 8.36e-01 -0.0199 0.0957 0.41 pDC L2
ENSG00000088035 ALG6 103459 sc-eQTL 3.27e-01 0.0915 0.0929 0.41 pDC L2
ENSG00000116641 DOCK7 782648 sc-eQTL 1.21e-01 -0.147 0.0945 0.41 pDC L2
ENSG00000125703 ATG4C 686902 sc-eQTL 9.97e-01 0.000342 0.0854 0.41 pDC L2
ENSG00000142856 ITGB3BP -122687 sc-eQTL 8.18e-01 -0.0221 0.0959 0.41 pDC L2
ENSG00000203965 EFCAB7 -52338 sc-eQTL 7.74e-01 -0.0244 0.0849 0.41 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -122377 sc-eQTL 7.05e-01 0.031 0.0816 0.412 B_Memory LOneK1K
ENSG00000088035 ALG6 103459 sc-eQTL 5.84e-01 -0.0495 0.0902 0.412 B_Memory LOneK1K
ENSG00000116641 DOCK7 782648 sc-eQTL 5.46e-01 -0.0473 0.0783 0.412 B_Memory LOneK1K
ENSG00000125703 ATG4C 686902 sc-eQTL 1.34e-01 0.0949 0.063 0.412 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -122687 sc-eQTL 2.20e-03 -0.252 0.0814 0.412 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -52338 sc-eQTL 3.81e-06 -0.391 0.0825 0.412 B_Memory LOneK1K
ENSG00000079739 PGM1 -122377 sc-eQTL 1.34e-01 0.128 0.0851 0.412 B_Naive LOneK1K
ENSG00000088035 ALG6 103459 sc-eQTL 8.07e-01 0.0215 0.0881 0.412 B_Naive LOneK1K
ENSG00000116641 DOCK7 782648 sc-eQTL 8.67e-01 -0.0138 0.0822 0.412 B_Naive LOneK1K
ENSG00000125703 ATG4C 686902 sc-eQTL 2.78e-01 -0.0681 0.0626 0.412 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -122687 sc-eQTL 2.33e-07 -0.445 0.0833 0.412 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -52338 sc-eQTL 7.62e-02 -0.158 0.0885 0.412 B_Naive LOneK1K
ENSG00000079739 PGM1 -122377 sc-eQTL 5.02e-01 0.0541 0.0803 0.412 CD14_Mono LOneK1K
ENSG00000088035 ALG6 103459 sc-eQTL 9.54e-01 0.00449 0.0778 0.412 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 782648 sc-eQTL 8.34e-02 -0.135 0.0778 0.412 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 686902 sc-eQTL 2.44e-01 0.0631 0.054 0.412 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -122687 sc-eQTL 1.06e-03 -0.26 0.0781 0.412 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -122377 sc-eQTL 1.26e-01 0.117 0.076 0.412 CD16_Mono LOneK1K
ENSG00000088035 ALG6 103459 sc-eQTL 8.77e-01 0.0135 0.0868 0.412 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 782648 sc-eQTL 4.44e-01 -0.0658 0.0858 0.412 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 686902 sc-eQTL 1.88e-01 -0.0964 0.0729 0.412 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -122687 sc-eQTL 4.64e-03 -0.239 0.0834 0.412 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -122377 sc-eQTL 6.88e-01 0.0263 0.0654 0.412 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 103459 sc-eQTL 3.44e-01 0.0743 0.0784 0.412 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 782648 sc-eQTL 6.14e-01 0.0356 0.0703 0.412 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 686902 sc-eQTL 8.19e-01 -0.0161 0.0702 0.412 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -122687 sc-eQTL 6.39e-04 -0.281 0.081 0.412 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -52338 sc-eQTL 6.27e-01 -0.0447 0.0919 0.412 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -122377 eQTL 1.92e-14 0.134 0.0173 0.0111 0.0106 0.418
ENSG00000088035 ALG6 103459 eQTL 8.93e-06 0.0584 0.0131 0.0 0.0 0.418
ENSG00000116641 DOCK7 782666 eQTL 0.017 -0.0526 0.022 0.0 0.0 0.418
ENSG00000116652 DLEU2L -76048 eQTL 0.00102 -0.0846 0.0257 0.0036 0.00309 0.418
ENSG00000185483 ROR1 -302983 pQTL 0.00895 0.0348 0.0133 0.00149 0.0 0.415
ENSG00000203965 EFCAB7 -52338 eQTL 1.82e-07 -0.124 0.0236 0.01 0.00978 0.418
ENSG00000230798 FOXD3-AS1 146593 eQTL 0.0255 0.0579 0.0259 0.0 0.0 0.418

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -122377 5.97e-06 1.18e-05 1.21e-06 4.56e-06 1.57e-06 1.58e-06 8.65e-06 1.04e-06 4.72e-06 2.5e-06 6.52e-06 2.94e-06 1.06e-05 3.18e-06 1.91e-06 4.51e-06 3.8e-06 3.94e-06 1.51e-06 1.34e-06 2.77e-06 6.85e-06 4.93e-06 1.65e-06 1.11e-05 2.1e-06 2.55e-06 1.84e-06 6.75e-06 6.17e-06 2.89e-06 4.84e-07 5.21e-07 1.6e-06 2.06e-06 1.16e-06 1.09e-06 4.51e-07 8.67e-07 7.42e-07 1.67e-07 8.35e-06 1.28e-06 1.75e-07 4.33e-07 1.32e-06 1.16e-06 2.54e-07 3.26e-07
ENSG00000088035 ALG6 103459 7.62e-06 1.25e-05 1.26e-06 6.02e-06 1.56e-06 2.16e-06 9.75e-06 1.24e-06 6.16e-06 3.06e-06 8.76e-06 4.59e-06 1.2e-05 4.03e-06 2.54e-06 5.7e-06 4.09e-06 6.03e-06 2.1e-06 1.71e-06 2.92e-06 7.65e-06 6.46e-06 2.01e-06 1.31e-05 2.4e-06 3.58e-06 2.27e-06 7.85e-06 7.69e-06 4.23e-06 7.35e-07 8.05e-07 2.24e-06 2.44e-06 1.3e-06 1e-06 8.19e-07 1.29e-06 9.15e-07 2.08e-07 1.17e-05 1.31e-06 1.7e-07 5.95e-07 8.98e-07 9.55e-07 4.43e-07 4.68e-07