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Genes within 1Mb (chr1:63440113:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -153298 sc-eQTL 2.00e-01 0.101 0.0786 0.53 B L1
ENSG00000088035 ALG6 72538 sc-eQTL 9.96e-01 0.000377 0.0817 0.53 B L1
ENSG00000116641 DOCK7 751727 sc-eQTL 3.82e-01 -0.0714 0.0816 0.53 B L1
ENSG00000125703 ATG4C 655981 sc-eQTL 2.24e-01 -0.069 0.0566 0.53 B L1
ENSG00000142856 ITGB3BP -153608 sc-eQTL 1.67e-07 -0.459 0.0847 0.53 B L1
ENSG00000203965 EFCAB7 -83259 sc-eQTL 6.38e-04 -0.312 0.0901 0.53 B L1
ENSG00000079739 PGM1 -153298 sc-eQTL 4.73e-01 0.0484 0.0674 0.53 CD4T L1
ENSG00000088035 ALG6 72538 sc-eQTL 4.92e-01 -0.0512 0.0744 0.53 CD4T L1
ENSG00000116641 DOCK7 751727 sc-eQTL 5.94e-01 -0.0403 0.0754 0.53 CD4T L1
ENSG00000125703 ATG4C 655981 sc-eQTL 7.72e-01 0.0176 0.0609 0.53 CD4T L1
ENSG00000142856 ITGB3BP -153608 sc-eQTL 3.89e-12 -0.568 0.0771 0.53 CD4T L1
ENSG00000203965 EFCAB7 -83259 sc-eQTL 1.03e-02 -0.198 0.0764 0.53 CD4T L1
ENSG00000079739 PGM1 -153298 sc-eQTL 8.92e-01 -0.0102 0.0747 0.53 CD8T L1
ENSG00000088035 ALG6 72538 sc-eQTL 2.03e-01 -0.105 0.0821 0.53 CD8T L1
ENSG00000116641 DOCK7 751727 sc-eQTL 2.49e-01 0.0963 0.0832 0.53 CD8T L1
ENSG00000125703 ATG4C 655981 sc-eQTL 6.31e-01 0.0382 0.0793 0.53 CD8T L1
ENSG00000142856 ITGB3BP -153608 sc-eQTL 5.50e-08 -0.466 0.0827 0.53 CD8T L1
ENSG00000203965 EFCAB7 -83259 sc-eQTL 4.48e-05 -0.354 0.085 0.53 CD8T L1
ENSG00000079739 PGM1 -153298 sc-eQTL 8.25e-01 0.0186 0.084 0.525 DC L1
ENSG00000088035 ALG6 72538 sc-eQTL 4.18e-01 0.0703 0.0866 0.525 DC L1
ENSG00000116641 DOCK7 751727 sc-eQTL 5.92e-01 0.0477 0.0888 0.525 DC L1
ENSG00000125703 ATG4C 655981 sc-eQTL 4.33e-01 -0.0546 0.0694 0.525 DC L1
ENSG00000142856 ITGB3BP -153608 sc-eQTL 2.47e-01 -0.112 0.0969 0.525 DC L1
ENSG00000203965 EFCAB7 -83259 sc-eQTL 2.89e-01 -0.0896 0.0844 0.525 DC L1
ENSG00000079739 PGM1 -153298 sc-eQTL 6.98e-01 0.0315 0.081 0.53 Mono L1
ENSG00000088035 ALG6 72538 sc-eQTL 6.24e-01 0.0415 0.0845 0.53 Mono L1
ENSG00000116641 DOCK7 751727 sc-eQTL 2.75e-01 -0.0893 0.0815 0.53 Mono L1
ENSG00000125703 ATG4C 655981 sc-eQTL 6.99e-01 0.0214 0.0552 0.53 Mono L1
ENSG00000142856 ITGB3BP -153608 sc-eQTL 3.46e-06 -0.396 0.083 0.53 Mono L1
ENSG00000079739 PGM1 -153298 sc-eQTL 2.29e-01 0.0841 0.0697 0.528 NK L1
ENSG00000088035 ALG6 72538 sc-eQTL 5.55e-01 0.0485 0.0819 0.528 NK L1
ENSG00000116641 DOCK7 751727 sc-eQTL 7.61e-01 0.0205 0.0675 0.528 NK L1
ENSG00000125703 ATG4C 655981 sc-eQTL 6.60e-01 -0.0319 0.0725 0.528 NK L1
ENSG00000142856 ITGB3BP -153608 sc-eQTL 7.21e-05 -0.352 0.0868 0.528 NK L1
ENSG00000203965 EFCAB7 -83259 sc-eQTL 2.14e-01 -0.121 0.0975 0.528 NK L1
ENSG00000079739 PGM1 -153298 sc-eQTL 5.72e-01 0.0447 0.0789 0.53 Other_T L1
ENSG00000088035 ALG6 72538 sc-eQTL 4.62e-01 -0.0584 0.0792 0.53 Other_T L1
ENSG00000116641 DOCK7 751727 sc-eQTL 2.43e-01 0.0945 0.0807 0.53 Other_T L1
ENSG00000125703 ATG4C 655981 sc-eQTL 7.03e-02 0.127 0.0695 0.53 Other_T L1
ENSG00000142856 ITGB3BP -153608 sc-eQTL 1.14e-02 -0.156 0.0612 0.53 Other_T L1
ENSG00000203965 EFCAB7 -83259 sc-eQTL 4.80e-02 -0.189 0.095 0.53 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -153298 sc-eQTL 8.96e-01 0.0138 0.106 0.536 B_Activated L2
ENSG00000088035 ALG6 72538 sc-eQTL 8.43e-02 0.175 0.101 0.536 B_Activated L2
ENSG00000116641 DOCK7 751727 sc-eQTL 8.92e-01 -0.0129 0.0946 0.536 B_Activated L2
ENSG00000125703 ATG4C 655981 sc-eQTL 7.11e-01 0.0368 0.0994 0.536 B_Activated L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 1.01e-02 -0.248 0.0953 0.536 B_Activated L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 4.46e-02 -0.184 0.0909 0.536 B_Activated L2
ENSG00000079739 PGM1 -153298 sc-eQTL 3.16e-01 0.0942 0.0938 0.53 B_Intermediate L2
ENSG00000088035 ALG6 72538 sc-eQTL 1.25e-01 -0.146 0.095 0.53 B_Intermediate L2
ENSG00000116641 DOCK7 751727 sc-eQTL 4.93e-01 -0.0626 0.0911 0.53 B_Intermediate L2
ENSG00000125703 ATG4C 655981 sc-eQTL 1.12e-01 0.122 0.0768 0.53 B_Intermediate L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 2.01e-02 -0.213 0.0908 0.53 B_Intermediate L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 3.18e-04 -0.323 0.0883 0.53 B_Intermediate L2
ENSG00000079739 PGM1 -153298 sc-eQTL 7.92e-01 0.0246 0.0928 0.528 B_Memory L2
ENSG00000088035 ALG6 72538 sc-eQTL 3.29e-01 0.0922 0.0942 0.528 B_Memory L2
ENSG00000116641 DOCK7 751727 sc-eQTL 1.05e-01 -0.143 0.088 0.528 B_Memory L2
ENSG00000125703 ATG4C 655981 sc-eQTL 3.65e-01 -0.0763 0.084 0.528 B_Memory L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 2.35e-02 -0.217 0.0951 0.528 B_Memory L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 7.94e-02 -0.167 0.0949 0.528 B_Memory L2
ENSG00000079739 PGM1 -153298 sc-eQTL 3.16e-01 0.0935 0.0931 0.53 B_Naive1 L2
ENSG00000088035 ALG6 72538 sc-eQTL 9.98e-01 0.000261 0.0937 0.53 B_Naive1 L2
ENSG00000116641 DOCK7 751727 sc-eQTL 9.07e-01 0.0105 0.0897 0.53 B_Naive1 L2
ENSG00000125703 ATG4C 655981 sc-eQTL 8.73e-01 -0.0111 0.0691 0.53 B_Naive1 L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 3.66e-05 -0.371 0.0881 0.53 B_Naive1 L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 2.96e-02 -0.212 0.0967 0.53 B_Naive1 L2
ENSG00000079739 PGM1 -153298 sc-eQTL 7.55e-01 0.0287 0.0917 0.53 B_Naive2 L2
ENSG00000088035 ALG6 72538 sc-eQTL 3.75e-01 0.085 0.0955 0.53 B_Naive2 L2
ENSG00000116641 DOCK7 751727 sc-eQTL 7.13e-01 0.0339 0.092 0.53 B_Naive2 L2
ENSG00000125703 ATG4C 655981 sc-eQTL 5.08e-02 -0.172 0.0878 0.53 B_Naive2 L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 8.01e-06 -0.419 0.0916 0.53 B_Naive2 L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 2.32e-01 0.114 0.0953 0.53 B_Naive2 L2
ENSG00000079739 PGM1 -153298 sc-eQTL 5.42e-01 -0.0562 0.0921 0.527 CD4_CTL L2
ENSG00000088035 ALG6 72538 sc-eQTL 2.75e-01 -0.106 0.0971 0.527 CD4_CTL L2
ENSG00000116641 DOCK7 751727 sc-eQTL 3.09e-01 0.0866 0.0849 0.527 CD4_CTL L2
ENSG00000125703 ATG4C 655981 sc-eQTL 5.94e-01 0.047 0.0881 0.527 CD4_CTL L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 8.10e-01 -0.0227 0.0942 0.527 CD4_CTL L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 4.70e-01 0.0648 0.0894 0.527 CD4_CTL L2
ENSG00000079739 PGM1 -153298 sc-eQTL 7.97e-01 0.0194 0.0753 0.53 CD4_Naive L2
ENSG00000088035 ALG6 72538 sc-eQTL 9.26e-01 -0.00757 0.0818 0.53 CD4_Naive L2
ENSG00000116641 DOCK7 751727 sc-eQTL 3.94e-01 -0.0685 0.0802 0.53 CD4_Naive L2
ENSG00000125703 ATG4C 655981 sc-eQTL 3.61e-01 0.0649 0.0709 0.53 CD4_Naive L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 5.69e-11 -0.542 0.0784 0.53 CD4_Naive L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 1.17e-01 -0.135 0.0857 0.53 CD4_Naive L2
ENSG00000079739 PGM1 -153298 sc-eQTL 8.68e-01 -0.0132 0.0793 0.53 CD4_TCM L2
ENSG00000088035 ALG6 72538 sc-eQTL 3.73e-01 -0.0821 0.0919 0.53 CD4_TCM L2
ENSG00000116641 DOCK7 751727 sc-eQTL 4.93e-01 -0.056 0.0815 0.53 CD4_TCM L2
ENSG00000125703 ATG4C 655981 sc-eQTL 1.28e-01 -0.121 0.079 0.53 CD4_TCM L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 1.23e-06 -0.443 0.0886 0.53 CD4_TCM L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 1.54e-02 -0.218 0.0894 0.53 CD4_TCM L2
ENSG00000079739 PGM1 -153298 sc-eQTL 4.20e-02 0.189 0.0922 0.53 CD4_TEM L2
ENSG00000088035 ALG6 72538 sc-eQTL 9.21e-01 0.00928 0.0936 0.53 CD4_TEM L2
ENSG00000116641 DOCK7 751727 sc-eQTL 2.51e-01 -0.105 0.0909 0.53 CD4_TEM L2
ENSG00000125703 ATG4C 655981 sc-eQTL 2.00e-01 0.113 0.0882 0.53 CD4_TEM L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 6.91e-03 -0.245 0.0899 0.53 CD4_TEM L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 5.50e-02 -0.181 0.0939 0.53 CD4_TEM L2
ENSG00000079739 PGM1 -153298 sc-eQTL 4.74e-01 -0.061 0.085 0.53 CD8_CTL L2
ENSG00000088035 ALG6 72538 sc-eQTL 1.38e-01 -0.134 0.0901 0.53 CD8_CTL L2
ENSG00000116641 DOCK7 751727 sc-eQTL 7.98e-01 0.022 0.0859 0.53 CD8_CTL L2
ENSG00000125703 ATG4C 655981 sc-eQTL 9.83e-03 0.235 0.09 0.53 CD8_CTL L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 8.88e-03 -0.247 0.0935 0.53 CD8_CTL L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 2.17e-01 -0.12 0.0971 0.53 CD8_CTL L2
ENSG00000079739 PGM1 -153298 sc-eQTL 8.36e-02 0.147 0.0848 0.53 CD8_Naive L2
ENSG00000088035 ALG6 72538 sc-eQTL 7.00e-01 -0.0341 0.0884 0.53 CD8_Naive L2
ENSG00000116641 DOCK7 751727 sc-eQTL 3.85e-01 0.0794 0.0912 0.53 CD8_Naive L2
ENSG00000125703 ATG4C 655981 sc-eQTL 2.67e-01 -0.0973 0.0875 0.53 CD8_Naive L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 1.95e-07 -0.448 0.0833 0.53 CD8_Naive L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 2.58e-02 -0.186 0.0828 0.53 CD8_Naive L2
ENSG00000079739 PGM1 -153298 sc-eQTL 2.30e-01 -0.113 0.0941 0.537 CD8_TCM L2
ENSG00000088035 ALG6 72538 sc-eQTL 8.74e-01 0.0152 0.0957 0.537 CD8_TCM L2
ENSG00000116641 DOCK7 751727 sc-eQTL 6.38e-01 -0.044 0.0933 0.537 CD8_TCM L2
ENSG00000125703 ATG4C 655981 sc-eQTL 8.03e-01 -0.0239 0.0955 0.537 CD8_TCM L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 4.44e-02 -0.186 0.0918 0.537 CD8_TCM L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 2.14e-01 -0.117 0.0942 0.537 CD8_TCM L2
ENSG00000079739 PGM1 -153298 sc-eQTL 1.46e-01 -0.138 0.0945 0.516 CD8_TEM L2
ENSG00000088035 ALG6 72538 sc-eQTL 9.23e-01 0.00918 0.0954 0.516 CD8_TEM L2
ENSG00000116641 DOCK7 751727 sc-eQTL 9.96e-01 0.000439 0.0924 0.516 CD8_TEM L2
ENSG00000125703 ATG4C 655981 sc-eQTL 6.01e-02 0.167 0.0881 0.516 CD8_TEM L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 5.86e-01 -0.0524 0.0961 0.516 CD8_TEM L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 6.31e-02 -0.173 0.0925 0.516 CD8_TEM L2
ENSG00000079739 PGM1 -153298 sc-eQTL 6.35e-01 0.0439 0.0923 0.526 MAIT L2
ENSG00000088035 ALG6 72538 sc-eQTL 8.77e-01 -0.0142 0.0914 0.526 MAIT L2
ENSG00000116641 DOCK7 751727 sc-eQTL 7.59e-01 0.0269 0.0876 0.526 MAIT L2
ENSG00000125703 ATG4C 655981 sc-eQTL 7.91e-02 0.162 0.0917 0.526 MAIT L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 1.95e-03 -0.284 0.0904 0.526 MAIT L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 3.77e-01 -0.0841 0.0951 0.526 MAIT L2
ENSG00000079739 PGM1 -153298 sc-eQTL 5.02e-01 0.061 0.0907 0.527 NK_CD56bright L2
ENSG00000088035 ALG6 72538 sc-eQTL 1.83e-01 0.124 0.0927 0.527 NK_CD56bright L2
ENSG00000116641 DOCK7 751727 sc-eQTL 7.98e-01 0.0206 0.0807 0.527 NK_CD56bright L2
ENSG00000125703 ATG4C 655981 sc-eQTL 4.94e-01 0.0617 0.09 0.527 NK_CD56bright L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 4.92e-01 -0.0646 0.0937 0.527 NK_CD56bright L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 8.80e-02 -0.158 0.0919 0.527 NK_CD56bright L2
ENSG00000079739 PGM1 -153298 sc-eQTL 2.00e-01 0.093 0.0723 0.526 NK_CD56dim L2
ENSG00000088035 ALG6 72538 sc-eQTL 9.31e-01 -0.00801 0.0921 0.526 NK_CD56dim L2
ENSG00000116641 DOCK7 751727 sc-eQTL 9.44e-01 -0.00567 0.0802 0.526 NK_CD56dim L2
ENSG00000125703 ATG4C 655981 sc-eQTL 9.28e-02 -0.137 0.0809 0.526 NK_CD56dim L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 5.34e-02 -0.178 0.0918 0.526 NK_CD56dim L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 4.81e-01 -0.0706 0.1 0.526 NK_CD56dim L2
ENSG00000079739 PGM1 -153298 sc-eQTL 1.22e-01 -0.154 0.099 0.532 NK_HLA L2
ENSG00000088035 ALG6 72538 sc-eQTL 5.75e-01 0.058 0.103 0.532 NK_HLA L2
ENSG00000116641 DOCK7 751727 sc-eQTL 2.85e-01 -0.0844 0.0787 0.532 NK_HLA L2
ENSG00000125703 ATG4C 655981 sc-eQTL 7.52e-01 0.029 0.0918 0.532 NK_HLA L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 5.00e-02 -0.188 0.0955 0.532 NK_HLA L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 9.81e-01 0.00224 0.0918 0.532 NK_HLA L2
ENSG00000079739 PGM1 -153298 sc-eQTL 2.17e-01 0.0985 0.0796 0.526 NK_cytokine L2
ENSG00000088035 ALG6 72538 sc-eQTL 8.09e-01 0.0219 0.0903 0.526 NK_cytokine L2
ENSG00000116641 DOCK7 751727 sc-eQTL 6.34e-01 0.0399 0.0836 0.526 NK_cytokine L2
ENSG00000125703 ATG4C 655981 sc-eQTL 6.88e-01 0.0344 0.0855 0.526 NK_cytokine L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 5.58e-05 -0.351 0.0852 0.526 NK_cytokine L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 7.50e-01 -0.0301 0.0944 0.526 NK_cytokine L2
ENSG00000079739 PGM1 -153298 sc-eQTL 2.33e-01 -0.141 0.117 0.533 PB L2
ENSG00000088035 ALG6 72538 sc-eQTL 8.17e-01 -0.0286 0.124 0.533 PB L2
ENSG00000116641 DOCK7 751727 sc-eQTL 2.51e-01 -0.152 0.132 0.533 PB L2
ENSG00000125703 ATG4C 655981 sc-eQTL 2.20e-01 0.142 0.115 0.533 PB L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 1.28e-01 -0.175 0.114 0.533 PB L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 3.60e-01 -0.116 0.126 0.533 PB L2
ENSG00000079739 PGM1 -153298 sc-eQTL 6.83e-01 -0.0349 0.0853 0.53 Pro_T L2
ENSG00000088035 ALG6 72538 sc-eQTL 4.32e-01 -0.0683 0.0867 0.53 Pro_T L2
ENSG00000116641 DOCK7 751727 sc-eQTL 7.92e-01 -0.023 0.0871 0.53 Pro_T L2
ENSG00000125703 ATG4C 655981 sc-eQTL 1.64e-01 -0.106 0.0759 0.53 Pro_T L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 2.05e-01 0.0968 0.0762 0.53 Pro_T L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 6.47e-01 0.0407 0.0888 0.53 Pro_T L2
ENSG00000079739 PGM1 -153298 sc-eQTL 3.78e-01 0.0793 0.0897 0.53 Treg L2
ENSG00000088035 ALG6 72538 sc-eQTL 4.32e-01 0.0755 0.096 0.53 Treg L2
ENSG00000116641 DOCK7 751727 sc-eQTL 8.98e-02 0.149 0.0876 0.53 Treg L2
ENSG00000125703 ATG4C 655981 sc-eQTL 8.29e-01 -0.0195 0.0901 0.53 Treg L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 6.01e-01 -0.0494 0.0943 0.53 Treg L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 7.86e-01 -0.0245 0.0902 0.53 Treg L2
ENSG00000079739 PGM1 -153298 sc-eQTL 6.62e-01 -0.0402 0.0917 0.517 cDC L2
ENSG00000088035 ALG6 72538 sc-eQTL 3.64e-01 -0.0845 0.0928 0.517 cDC L2
ENSG00000116641 DOCK7 751727 sc-eQTL 8.46e-01 0.0178 0.0913 0.517 cDC L2
ENSG00000125703 ATG4C 655981 sc-eQTL 8.20e-01 0.018 0.0793 0.517 cDC L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 4.26e-01 -0.08 0.1 0.517 cDC L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 3.44e-01 -0.0764 0.0805 0.517 cDC L2
ENSG00000079739 PGM1 -153298 sc-eQTL 6.61e-01 0.037 0.0843 0.53 cMono_IL1B L2
ENSG00000088035 ALG6 72538 sc-eQTL 9.71e-01 -0.00304 0.0844 0.53 cMono_IL1B L2
ENSG00000116641 DOCK7 751727 sc-eQTL 4.20e-01 -0.0718 0.0889 0.53 cMono_IL1B L2
ENSG00000125703 ATG4C 655981 sc-eQTL 8.12e-01 0.0149 0.0626 0.53 cMono_IL1B L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 5.64e-06 -0.393 0.0844 0.53 cMono_IL1B L2
ENSG00000079739 PGM1 -153298 sc-eQTL 8.59e-01 0.0167 0.0943 0.53 cMono_S100A L2
ENSG00000088035 ALG6 72538 sc-eQTL 8.29e-01 0.0207 0.0956 0.53 cMono_S100A L2
ENSG00000116641 DOCK7 751727 sc-eQTL 8.17e-01 -0.0205 0.0886 0.53 cMono_S100A L2
ENSG00000125703 ATG4C 655981 sc-eQTL 2.54e-01 0.0875 0.0765 0.53 cMono_S100A L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 2.77e-01 -0.0942 0.0863 0.53 cMono_S100A L2
ENSG00000079739 PGM1 -153298 sc-eQTL 3.70e-01 0.091 0.101 0.536 gdT L2
ENSG00000088035 ALG6 72538 sc-eQTL 5.36e-01 -0.0669 0.108 0.536 gdT L2
ENSG00000116641 DOCK7 751727 sc-eQTL 6.55e-02 0.194 0.105 0.536 gdT L2
ENSG00000125703 ATG4C 655981 sc-eQTL 4.42e-01 0.078 0.101 0.536 gdT L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 9.72e-02 -0.178 0.107 0.536 gdT L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 4.72e-01 0.0761 0.106 0.536 gdT L2
ENSG00000079739 PGM1 -153298 sc-eQTL 1.32e-01 0.145 0.0963 0.527 intMono L2
ENSG00000088035 ALG6 72538 sc-eQTL 1.89e-01 0.118 0.0898 0.527 intMono L2
ENSG00000116641 DOCK7 751727 sc-eQTL 7.04e-01 -0.0351 0.0921 0.527 intMono L2
ENSG00000125703 ATG4C 655981 sc-eQTL 5.03e-01 0.0589 0.0878 0.527 intMono L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 7.69e-03 -0.256 0.0951 0.527 intMono L2
ENSG00000079739 PGM1 -153298 sc-eQTL 6.85e-01 -0.0343 0.0844 0.532 ncMono L2
ENSG00000088035 ALG6 72538 sc-eQTL 4.75e-02 -0.183 0.0918 0.532 ncMono L2
ENSG00000116641 DOCK7 751727 sc-eQTL 4.68e-01 -0.0662 0.0911 0.532 ncMono L2
ENSG00000125703 ATG4C 655981 sc-eQTL 1.80e-01 -0.114 0.0849 0.532 ncMono L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 4.88e-02 -0.175 0.0883 0.532 ncMono L2
ENSG00000079739 PGM1 -153298 sc-eQTL 6.47e-01 -0.0471 0.103 0.511 pDC L2
ENSG00000088035 ALG6 72538 sc-eQTL 4.73e-01 0.0718 0.1 0.511 pDC L2
ENSG00000116641 DOCK7 751727 sc-eQTL 8.31e-01 -0.0219 0.102 0.511 pDC L2
ENSG00000125703 ATG4C 655981 sc-eQTL 4.22e-01 -0.0738 0.0916 0.511 pDC L2
ENSG00000142856 ITGB3BP -153608 sc-eQTL 7.67e-01 -0.0305 0.103 0.511 pDC L2
ENSG00000203965 EFCAB7 -83259 sc-eQTL 9.70e-01 0.0034 0.0912 0.511 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -153298 sc-eQTL 4.83e-01 0.0614 0.0874 0.53 B_Memory LOneK1K
ENSG00000088035 ALG6 72538 sc-eQTL 4.88e-01 -0.0671 0.0966 0.53 B_Memory LOneK1K
ENSG00000116641 DOCK7 751727 sc-eQTL 1.48e-01 -0.121 0.0836 0.53 B_Memory LOneK1K
ENSG00000125703 ATG4C 655981 sc-eQTL 3.17e-01 0.068 0.0677 0.53 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -153608 sc-eQTL 6.76e-04 -0.299 0.0868 0.53 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -83259 sc-eQTL 4.21e-06 -0.418 0.0884 0.53 B_Memory LOneK1K
ENSG00000079739 PGM1 -153298 sc-eQTL 2.42e-01 0.106 0.0907 0.53 B_Naive LOneK1K
ENSG00000088035 ALG6 72538 sc-eQTL 8.01e-01 0.0237 0.0937 0.53 B_Naive LOneK1K
ENSG00000116641 DOCK7 751727 sc-eQTL 9.01e-01 0.0109 0.0875 0.53 B_Naive LOneK1K
ENSG00000125703 ATG4C 655981 sc-eQTL 1.48e-01 -0.0964 0.0664 0.53 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -153608 sc-eQTL 1.05e-06 -0.449 0.0892 0.53 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -83259 sc-eQTL 2.76e-01 -0.103 0.0946 0.53 B_Naive LOneK1K
ENSG00000079739 PGM1 -153298 sc-eQTL 7.31e-01 0.0298 0.0865 0.53 CD14_Mono LOneK1K
ENSG00000088035 ALG6 72538 sc-eQTL 8.92e-01 0.0114 0.0838 0.53 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 751727 sc-eQTL 2.92e-01 -0.089 0.0842 0.53 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 655981 sc-eQTL 3.97e-01 0.0494 0.0582 0.53 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -153608 sc-eQTL 9.44e-05 -0.331 0.0832 0.53 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -153298 sc-eQTL 4.21e-01 0.0667 0.0828 0.528 CD16_Mono LOneK1K
ENSG00000088035 ALG6 72538 sc-eQTL 8.66e-01 -0.0159 0.0942 0.528 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 751727 sc-eQTL 2.27e-01 -0.113 0.0929 0.528 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 655981 sc-eQTL 2.37e-01 -0.094 0.0792 0.528 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -153608 sc-eQTL 1.07e-04 -0.351 0.089 0.528 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -153298 sc-eQTL 2.94e-01 0.0746 0.0708 0.526 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 72538 sc-eQTL 8.66e-01 0.0144 0.0853 0.526 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 751727 sc-eQTL 5.97e-01 0.0405 0.0764 0.526 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 655981 sc-eQTL 5.11e-01 -0.0502 0.0762 0.526 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -153608 sc-eQTL 8.65e-05 -0.349 0.0871 0.526 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -83259 sc-eQTL 5.00e-01 -0.0673 0.0997 0.526 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -153298 eQTL 2.17e-11 0.119 0.0175 0.0 0.0 0.454
ENSG00000088035 ALG6 72538 eQTL 0.000862 0.0442 0.0132 0.0 0.0 0.454
ENSG00000116652 DLEU2L -106969 eQTL 0.0356 -0.0546 0.026 0.0 0.0 0.454
ENSG00000203965 EFCAB7 -83259 eQTL 7.09e-05 -0.0953 0.0239 0.0 0.0 0.454
ENSG00000230798 FOXD3-AS1 115672 eQTL 0.00561 0.0723 0.026 0.00145 0.0013 0.454

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -153298 4.32e-06 4.1e-06 8.35e-07 2.14e-06 1.64e-06 1.15e-06 2.98e-06 1.04e-06 4.4e-06 2.07e-06 4.24e-06 3.43e-06 6.49e-06 1.47e-06 1.46e-06 3.09e-06 2.02e-06 2.81e-06 1.41e-06 1.09e-06 3e-06 4.56e-06 3.47e-06 1.48e-06 4.75e-06 1.93e-06 2.68e-06 1.57e-06 4.26e-06 3.42e-06 1.89e-06 4.02e-07 5.68e-07 1.66e-06 2.04e-06 1.16e-06 1.06e-06 4.24e-07 9.42e-07 4.56e-07 8.05e-07 4.47e-06 4.35e-07 1.61e-07 7.43e-07 6.57e-07 1.02e-06 6.6e-07 5.14e-07
ENSG00000203965 EFCAB7 -83259 6.16e-06 7.52e-06 1.3e-06 4.01e-06 2.36e-06 3e-06 9.34e-06 1.93e-06 6.1e-06 4.26e-06 8.86e-06 4.28e-06 1.12e-05 3.14e-06 1.73e-06 5.73e-06 3.76e-06 5.1e-06 2.47e-06 2.76e-06 4.44e-06 7.46e-06 6.46e-06 3.24e-06 1.02e-05 3.55e-06 4.48e-06 2.61e-06 7.5e-06 7.58e-06 3.88e-06 1.05e-06 1.26e-06 3.31e-06 2.96e-06 2.56e-06 1.9e-06 1.85e-06 2.02e-06 9.35e-07 1.19e-06 8.28e-06 1.14e-06 2.71e-07 8.66e-07 1.57e-06 1.38e-06 6.68e-07 4.84e-07