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Genes within 1Mb (chr1:63434603:G:GT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -158808 sc-eQTL 1.62e-01 0.103 0.0731 0.41 B L1
ENSG00000088035 ALG6 67028 sc-eQTL 6.08e-01 0.039 0.0761 0.41 B L1
ENSG00000116641 DOCK7 746217 sc-eQTL 3.50e-01 -0.0712 0.076 0.41 B L1
ENSG00000125703 ATG4C 650471 sc-eQTL 4.60e-01 -0.0391 0.0528 0.41 B L1
ENSG00000142856 ITGB3BP -159118 sc-eQTL 2.51e-07 -0.421 0.079 0.41 B L1
ENSG00000162607 USP1 998306 sc-eQTL 6.07e-01 0.0376 0.073 0.41 B L1
ENSG00000203965 EFCAB7 -88769 sc-eQTL 3.16e-05 -0.352 0.0828 0.41 B L1
ENSG00000079739 PGM1 -158808 sc-eQTL 2.75e-01 0.0688 0.0629 0.41 CD4T L1
ENSG00000088035 ALG6 67028 sc-eQTL 3.39e-01 0.0665 0.0695 0.41 CD4T L1
ENSG00000116641 DOCK7 746217 sc-eQTL 8.65e-01 -0.012 0.0705 0.41 CD4T L1
ENSG00000125703 ATG4C 650471 sc-eQTL 8.81e-01 0.00854 0.0569 0.41 CD4T L1
ENSG00000142856 ITGB3BP -159118 sc-eQTL 5.24e-08 -0.425 0.0753 0.41 CD4T L1
ENSG00000162607 USP1 998306 sc-eQTL 3.05e-01 -0.0566 0.0551 0.41 CD4T L1
ENSG00000203965 EFCAB7 -88769 sc-eQTL 2.00e-03 -0.222 0.0709 0.41 CD4T L1
ENSG00000079739 PGM1 -158808 sc-eQTL 9.03e-01 -0.00853 0.0698 0.41 CD8T L1
ENSG00000088035 ALG6 67028 sc-eQTL 8.42e-01 -0.0154 0.0769 0.41 CD8T L1
ENSG00000116641 DOCK7 746217 sc-eQTL 8.16e-01 -0.0182 0.0779 0.41 CD8T L1
ENSG00000125703 ATG4C 650471 sc-eQTL 7.41e-01 0.0245 0.074 0.41 CD8T L1
ENSG00000142856 ITGB3BP -159118 sc-eQTL 5.30e-09 -0.465 0.0764 0.41 CD8T L1
ENSG00000162607 USP1 998306 sc-eQTL 8.98e-01 -0.00826 0.0645 0.41 CD8T L1
ENSG00000203965 EFCAB7 -88769 sc-eQTL 1.18e-04 -0.313 0.0797 0.41 CD8T L1
ENSG00000079739 PGM1 -158808 sc-eQTL 2.33e-01 0.0917 0.0766 0.41 DC L1
ENSG00000088035 ALG6 67028 sc-eQTL 2.63e-01 0.0888 0.0791 0.41 DC L1
ENSG00000116641 DOCK7 746217 sc-eQTL 8.24e-01 0.0181 0.0813 0.41 DC L1
ENSG00000125703 ATG4C 650471 sc-eQTL 5.89e-01 -0.0344 0.0636 0.41 DC L1
ENSG00000142856 ITGB3BP -159118 sc-eQTL 6.76e-01 -0.0372 0.0889 0.41 DC L1
ENSG00000162607 USP1 998306 sc-eQTL 1.96e-01 0.1 0.0774 0.41 DC L1
ENSG00000203965 EFCAB7 -88769 sc-eQTL 2.46e-01 -0.0899 0.0772 0.41 DC L1
ENSG00000079739 PGM1 -158808 sc-eQTL 5.30e-01 0.0474 0.0754 0.41 Mono L1
ENSG00000088035 ALG6 67028 sc-eQTL 5.86e-01 0.043 0.0787 0.41 Mono L1
ENSG00000116641 DOCK7 746217 sc-eQTL 9.18e-02 -0.128 0.0757 0.41 Mono L1
ENSG00000125703 ATG4C 650471 sc-eQTL 4.47e-01 0.0391 0.0514 0.41 Mono L1
ENSG00000142856 ITGB3BP -159118 sc-eQTL 6.94e-04 -0.273 0.0792 0.41 Mono L1
ENSG00000162607 USP1 998306 sc-eQTL 9.89e-01 0.000909 0.0668 0.41 Mono L1
ENSG00000079739 PGM1 -158808 sc-eQTL 6.33e-01 0.0308 0.0644 0.41 NK L1
ENSG00000088035 ALG6 67028 sc-eQTL 1.17e-01 0.118 0.0751 0.41 NK L1
ENSG00000116641 DOCK7 746217 sc-eQTL 4.05e-01 0.0518 0.0621 0.41 NK L1
ENSG00000125703 ATG4C 650471 sc-eQTL 6.75e-01 -0.028 0.0668 0.41 NK L1
ENSG00000142856 ITGB3BP -159118 sc-eQTL 5.36e-04 -0.284 0.0807 0.41 NK L1
ENSG00000162607 USP1 998306 sc-eQTL 6.76e-01 0.031 0.0741 0.41 NK L1
ENSG00000203965 EFCAB7 -88769 sc-eQTL 2.93e-01 -0.0948 0.0899 0.41 NK L1
ENSG00000079739 PGM1 -158808 sc-eQTL 3.44e-01 -0.0697 0.0735 0.41 Other_T L1
ENSG00000088035 ALG6 67028 sc-eQTL 7.20e-01 -0.0266 0.074 0.41 Other_T L1
ENSG00000116641 DOCK7 746217 sc-eQTL 7.93e-01 0.0198 0.0756 0.41 Other_T L1
ENSG00000125703 ATG4C 650471 sc-eQTL 2.11e-02 0.15 0.0646 0.41 Other_T L1
ENSG00000142856 ITGB3BP -159118 sc-eQTL 2.49e-02 -0.13 0.0573 0.41 Other_T L1
ENSG00000162607 USP1 998306 sc-eQTL 4.91e-01 -0.0346 0.0502 0.41 Other_T L1
ENSG00000203965 EFCAB7 -88769 sc-eQTL 2.76e-01 -0.0976 0.0893 0.41 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -158808 sc-eQTL 3.81e-01 0.0874 0.0997 0.413 B_Activated L2
ENSG00000088035 ALG6 67028 sc-eQTL 1.63e-01 0.133 0.0952 0.413 B_Activated L2
ENSG00000116641 DOCK7 746217 sc-eQTL 2.95e-01 0.0933 0.0888 0.413 B_Activated L2
ENSG00000125703 ATG4C 650471 sc-eQTL 5.53e-01 0.0556 0.0936 0.413 B_Activated L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 5.73e-02 -0.173 0.0906 0.413 B_Activated L2
ENSG00000162607 USP1 998306 sc-eQTL 5.19e-01 -0.064 0.0991 0.413 B_Activated L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 2.41e-01 -0.102 0.0863 0.413 B_Activated L2
ENSG00000079739 PGM1 -158808 sc-eQTL 3.41e-01 0.0824 0.0863 0.412 B_Intermediate L2
ENSG00000088035 ALG6 67028 sc-eQTL 3.85e-01 -0.0763 0.0877 0.412 B_Intermediate L2
ENSG00000116641 DOCK7 746217 sc-eQTL 6.99e-01 0.0324 0.0839 0.412 B_Intermediate L2
ENSG00000125703 ATG4C 650471 sc-eQTL 7.68e-02 0.125 0.0705 0.412 B_Intermediate L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 6.12e-03 -0.23 0.0831 0.412 B_Intermediate L2
ENSG00000162607 USP1 998306 sc-eQTL 7.00e-01 -0.0326 0.0845 0.412 B_Intermediate L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 1.43e-03 -0.264 0.0818 0.412 B_Intermediate L2
ENSG00000079739 PGM1 -158808 sc-eQTL 8.36e-01 -0.0178 0.0856 0.409 B_Memory L2
ENSG00000088035 ALG6 67028 sc-eQTL 5.64e-01 0.0502 0.0869 0.409 B_Memory L2
ENSG00000116641 DOCK7 746217 sc-eQTL 9.40e-02 -0.136 0.081 0.409 B_Memory L2
ENSG00000125703 ATG4C 650471 sc-eQTL 8.34e-01 -0.0162 0.0775 0.409 B_Memory L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 7.33e-02 -0.159 0.0881 0.409 B_Memory L2
ENSG00000162607 USP1 998306 sc-eQTL 2.43e-01 -0.105 0.0892 0.409 B_Memory L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 2.18e-02 -0.201 0.087 0.409 B_Memory L2
ENSG00000079739 PGM1 -158808 sc-eQTL 2.25e-01 0.106 0.0872 0.41 B_Naive1 L2
ENSG00000088035 ALG6 67028 sc-eQTL 9.78e-01 -0.00243 0.0878 0.41 B_Naive1 L2
ENSG00000116641 DOCK7 746217 sc-eQTL 9.27e-01 0.00771 0.0841 0.41 B_Naive1 L2
ENSG00000125703 ATG4C 650471 sc-eQTL 9.95e-01 0.000442 0.0648 0.41 B_Naive1 L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 8.05e-06 -0.375 0.082 0.41 B_Naive1 L2
ENSG00000162607 USP1 998306 sc-eQTL 6.80e-01 0.0312 0.0756 0.41 B_Naive1 L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 1.28e-03 -0.292 0.0895 0.41 B_Naive1 L2
ENSG00000079739 PGM1 -158808 sc-eQTL 3.76e-01 0.0765 0.0862 0.41 B_Naive2 L2
ENSG00000088035 ALG6 67028 sc-eQTL 4.48e-01 0.0684 0.0899 0.41 B_Naive2 L2
ENSG00000116641 DOCK7 746217 sc-eQTL 8.17e-01 -0.02 0.0866 0.41 B_Naive2 L2
ENSG00000125703 ATG4C 650471 sc-eQTL 2.82e-01 -0.0896 0.0831 0.41 B_Naive2 L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 8.59e-06 -0.393 0.0862 0.41 B_Naive2 L2
ENSG00000162607 USP1 998306 sc-eQTL 4.99e-01 0.0582 0.086 0.41 B_Naive2 L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 2.35e-01 0.107 0.0897 0.41 B_Naive2 L2
ENSG00000079739 PGM1 -158808 sc-eQTL 7.80e-01 -0.0242 0.0863 0.407 CD4_CTL L2
ENSG00000088035 ALG6 67028 sc-eQTL 5.99e-01 -0.048 0.0912 0.407 CD4_CTL L2
ENSG00000116641 DOCK7 746217 sc-eQTL 4.17e-01 0.0647 0.0796 0.407 CD4_CTL L2
ENSG00000125703 ATG4C 650471 sc-eQTL 9.25e-01 0.00782 0.0825 0.407 CD4_CTL L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 5.09e-01 -0.0583 0.0882 0.407 CD4_CTL L2
ENSG00000162607 USP1 998306 sc-eQTL 9.66e-01 -0.00361 0.084 0.407 CD4_CTL L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 9.98e-01 0.000246 0.0839 0.407 CD4_CTL L2
ENSG00000079739 PGM1 -158808 sc-eQTL 2.82e-01 0.0758 0.0704 0.41 CD4_Naive L2
ENSG00000088035 ALG6 67028 sc-eQTL 4.22e-01 0.0615 0.0765 0.41 CD4_Naive L2
ENSG00000116641 DOCK7 746217 sc-eQTL 9.01e-01 -0.00939 0.0753 0.41 CD4_Naive L2
ENSG00000125703 ATG4C 650471 sc-eQTL 7.66e-01 0.0199 0.0666 0.41 CD4_Naive L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 3.53e-07 -0.402 0.0765 0.41 CD4_Naive L2
ENSG00000162607 USP1 998306 sc-eQTL 3.93e-01 -0.0532 0.0621 0.41 CD4_Naive L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 3.79e-02 -0.167 0.08 0.41 CD4_Naive L2
ENSG00000079739 PGM1 -158808 sc-eQTL 9.91e-01 0.000858 0.0738 0.41 CD4_TCM L2
ENSG00000088035 ALG6 67028 sc-eQTL 9.93e-01 0.000733 0.0858 0.41 CD4_TCM L2
ENSG00000116641 DOCK7 746217 sc-eQTL 1.96e-01 -0.0981 0.0757 0.41 CD4_TCM L2
ENSG00000125703 ATG4C 650471 sc-eQTL 1.34e-01 -0.111 0.0736 0.41 CD4_TCM L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 1.65e-04 -0.324 0.0843 0.41 CD4_TCM L2
ENSG00000162607 USP1 998306 sc-eQTL 3.33e-01 -0.0692 0.0714 0.41 CD4_TCM L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 2.00e-03 -0.258 0.0825 0.41 CD4_TCM L2
ENSG00000079739 PGM1 -158808 sc-eQTL 5.45e-03 0.239 0.085 0.41 CD4_TEM L2
ENSG00000088035 ALG6 67028 sc-eQTL 7.77e-01 0.0247 0.087 0.41 CD4_TEM L2
ENSG00000116641 DOCK7 746217 sc-eQTL 6.13e-01 0.0429 0.0847 0.41 CD4_TEM L2
ENSG00000125703 ATG4C 650471 sc-eQTL 2.64e-01 0.092 0.0821 0.41 CD4_TEM L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 9.58e-03 -0.219 0.0837 0.41 CD4_TEM L2
ENSG00000162607 USP1 998306 sc-eQTL 6.91e-03 -0.216 0.0792 0.41 CD4_TEM L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 1.06e-01 -0.142 0.0875 0.41 CD4_TEM L2
ENSG00000079739 PGM1 -158808 sc-eQTL 9.86e-01 -0.0014 0.079 0.41 CD8_CTL L2
ENSG00000088035 ALG6 67028 sc-eQTL 4.89e-01 -0.0582 0.0839 0.41 CD8_CTL L2
ENSG00000116641 DOCK7 746217 sc-eQTL 5.74e-01 -0.0449 0.0797 0.41 CD8_CTL L2
ENSG00000125703 ATG4C 650471 sc-eQTL 8.01e-02 0.148 0.0842 0.41 CD8_CTL L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 3.20e-02 -0.188 0.0873 0.41 CD8_CTL L2
ENSG00000162607 USP1 998306 sc-eQTL 5.02e-01 0.0531 0.079 0.41 CD8_CTL L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 1.79e-01 -0.121 0.09 0.41 CD8_CTL L2
ENSG00000079739 PGM1 -158808 sc-eQTL 2.30e-01 0.0964 0.08 0.41 CD8_Naive L2
ENSG00000088035 ALG6 67028 sc-eQTL 7.90e-01 0.0221 0.083 0.41 CD8_Naive L2
ENSG00000116641 DOCK7 746217 sc-eQTL 8.82e-01 -0.0128 0.0858 0.41 CD8_Naive L2
ENSG00000125703 ATG4C 650471 sc-eQTL 6.50e-01 -0.0374 0.0824 0.41 CD8_Naive L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 1.06e-07 -0.43 0.078 0.41 CD8_Naive L2
ENSG00000162607 USP1 998306 sc-eQTL 9.13e-02 -0.119 0.0701 0.41 CD8_Naive L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 4.90e-02 -0.154 0.078 0.41 CD8_Naive L2
ENSG00000079739 PGM1 -158808 sc-eQTL 9.92e-01 0.000847 0.0869 0.412 CD8_TCM L2
ENSG00000088035 ALG6 67028 sc-eQTL 7.68e-01 -0.026 0.088 0.412 CD8_TCM L2
ENSG00000116641 DOCK7 746217 sc-eQTL 6.21e-01 -0.0425 0.0858 0.412 CD8_TCM L2
ENSG00000125703 ATG4C 650471 sc-eQTL 4.05e-01 -0.0732 0.0877 0.412 CD8_TCM L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 1.92e-01 -0.111 0.085 0.412 CD8_TCM L2
ENSG00000162607 USP1 998306 sc-eQTL 5.97e-01 -0.0435 0.0821 0.412 CD8_TCM L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 1.22e-01 -0.134 0.0864 0.412 CD8_TCM L2
ENSG00000079739 PGM1 -158808 sc-eQTL 1.71e-01 -0.123 0.0895 0.397 CD8_TEM L2
ENSG00000088035 ALG6 67028 sc-eQTL 7.65e-01 0.027 0.0902 0.397 CD8_TEM L2
ENSG00000116641 DOCK7 746217 sc-eQTL 4.47e-01 -0.0665 0.0874 0.397 CD8_TEM L2
ENSG00000125703 ATG4C 650471 sc-eQTL 6.04e-02 0.157 0.0834 0.397 CD8_TEM L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 4.28e-02 -0.184 0.0901 0.397 CD8_TEM L2
ENSG00000162607 USP1 998306 sc-eQTL 7.59e-01 0.0266 0.0868 0.397 CD8_TEM L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 4.71e-02 -0.175 0.0874 0.397 CD8_TEM L2
ENSG00000079739 PGM1 -158808 sc-eQTL 5.24e-01 -0.0548 0.0859 0.409 MAIT L2
ENSG00000088035 ALG6 67028 sc-eQTL 4.65e-01 -0.0622 0.085 0.409 MAIT L2
ENSG00000116641 DOCK7 746217 sc-eQTL 9.81e-01 0.00199 0.0815 0.409 MAIT L2
ENSG00000125703 ATG4C 650471 sc-eQTL 5.90e-02 0.162 0.0852 0.409 MAIT L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 8.93e-03 -0.224 0.0847 0.409 MAIT L2
ENSG00000162607 USP1 998306 sc-eQTL 3.41e-01 -0.0813 0.0853 0.409 MAIT L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 8.09e-01 -0.0214 0.0887 0.409 MAIT L2
ENSG00000079739 PGM1 -158808 sc-eQTL 7.42e-01 0.0281 0.0853 0.409 NK_CD56bright L2
ENSG00000088035 ALG6 67028 sc-eQTL 9.16e-02 0.147 0.0868 0.409 NK_CD56bright L2
ENSG00000116641 DOCK7 746217 sc-eQTL 4.65e-01 0.0554 0.0756 0.409 NK_CD56bright L2
ENSG00000125703 ATG4C 650471 sc-eQTL 9.41e-01 -0.00624 0.0846 0.409 NK_CD56bright L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 7.37e-01 -0.0297 0.0881 0.409 NK_CD56bright L2
ENSG00000162607 USP1 998306 sc-eQTL 8.44e-01 -0.0179 0.0909 0.409 NK_CD56bright L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 1.33e-01 -0.13 0.0864 0.409 NK_CD56bright L2
ENSG00000079739 PGM1 -158808 sc-eQTL 7.27e-01 0.0233 0.0666 0.409 NK_CD56dim L2
ENSG00000088035 ALG6 67028 sc-eQTL 6.30e-01 0.0407 0.0845 0.409 NK_CD56dim L2
ENSG00000116641 DOCK7 746217 sc-eQTL 8.82e-01 -0.011 0.0735 0.409 NK_CD56dim L2
ENSG00000125703 ATG4C 650471 sc-eQTL 1.66e-02 -0.178 0.0737 0.409 NK_CD56dim L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 1.69e-01 -0.117 0.0846 0.409 NK_CD56dim L2
ENSG00000162607 USP1 998306 sc-eQTL 7.35e-01 0.0279 0.0824 0.409 NK_CD56dim L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 5.46e-01 -0.0555 0.0917 0.409 NK_CD56dim L2
ENSG00000079739 PGM1 -158808 sc-eQTL 7.66e-01 -0.0272 0.0913 0.413 NK_HLA L2
ENSG00000088035 ALG6 67028 sc-eQTL 2.90e-01 0.1 0.0944 0.413 NK_HLA L2
ENSG00000116641 DOCK7 746217 sc-eQTL 6.78e-01 -0.0301 0.0724 0.413 NK_HLA L2
ENSG00000125703 ATG4C 650471 sc-eQTL 9.24e-01 0.00803 0.0842 0.413 NK_HLA L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 5.05e-02 -0.172 0.0876 0.413 NK_HLA L2
ENSG00000162607 USP1 998306 sc-eQTL 6.42e-01 -0.0431 0.0925 0.413 NK_HLA L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 4.19e-01 0.0681 0.0841 0.413 NK_HLA L2
ENSG00000079739 PGM1 -158808 sc-eQTL 3.76e-01 0.0649 0.0732 0.409 NK_cytokine L2
ENSG00000088035 ALG6 67028 sc-eQTL 9.13e-01 0.00902 0.0829 0.409 NK_cytokine L2
ENSG00000116641 DOCK7 746217 sc-eQTL 7.01e-01 0.0295 0.0767 0.409 NK_cytokine L2
ENSG00000125703 ATG4C 650471 sc-eQTL 1.03e-01 0.128 0.078 0.409 NK_cytokine L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 1.88e-03 -0.25 0.0795 0.409 NK_cytokine L2
ENSG00000162607 USP1 998306 sc-eQTL 1.37e-01 0.127 0.085 0.409 NK_cytokine L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 9.86e-01 -0.00158 0.0866 0.409 NK_cytokine L2
ENSG00000079739 PGM1 -158808 sc-eQTL 3.46e-01 -0.102 0.108 0.404 PB L2
ENSG00000088035 ALG6 67028 sc-eQTL 9.67e-01 0.00467 0.113 0.404 PB L2
ENSG00000116641 DOCK7 746217 sc-eQTL 1.70e-01 -0.166 0.12 0.404 PB L2
ENSG00000125703 ATG4C 650471 sc-eQTL 5.97e-01 0.056 0.106 0.404 PB L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 1.35e-01 -0.157 0.104 0.404 PB L2
ENSG00000162607 USP1 998306 sc-eQTL 3.67e-01 0.0949 0.105 0.404 PB L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 1.60e-01 -0.163 0.115 0.404 PB L2
ENSG00000079739 PGM1 -158808 sc-eQTL 2.47e-01 -0.0927 0.0798 0.409 Pro_T L2
ENSG00000088035 ALG6 67028 sc-eQTL 6.93e-01 -0.0322 0.0815 0.409 Pro_T L2
ENSG00000116641 DOCK7 746217 sc-eQTL 3.87e-01 -0.0707 0.0816 0.409 Pro_T L2
ENSG00000125703 ATG4C 650471 sc-eQTL 3.24e-01 -0.0707 0.0714 0.409 Pro_T L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 1.11e-01 0.114 0.0714 0.409 Pro_T L2
ENSG00000162607 USP1 998306 sc-eQTL 4.77e-01 -0.0351 0.0493 0.409 Pro_T L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 9.41e-01 -0.00614 0.0834 0.409 Pro_T L2
ENSG00000079739 PGM1 -158808 sc-eQTL 7.73e-01 -0.0244 0.0844 0.41 Treg L2
ENSG00000088035 ALG6 67028 sc-eQTL 1.50e-01 0.13 0.0899 0.41 Treg L2
ENSG00000116641 DOCK7 746217 sc-eQTL 6.87e-01 0.0335 0.0829 0.41 Treg L2
ENSG00000125703 ATG4C 650471 sc-eQTL 7.17e-01 0.0308 0.0847 0.41 Treg L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 7.73e-01 0.0256 0.0886 0.41 Treg L2
ENSG00000162607 USP1 998306 sc-eQTL 4.70e-01 0.0619 0.0856 0.41 Treg L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 5.48e-01 -0.051 0.0847 0.41 Treg L2
ENSG00000079739 PGM1 -158808 sc-eQTL 7.62e-01 0.0255 0.0838 0.407 cDC L2
ENSG00000088035 ALG6 67028 sc-eQTL 4.05e-01 -0.0708 0.0848 0.407 cDC L2
ENSG00000116641 DOCK7 746217 sc-eQTL 6.03e-01 0.0435 0.0833 0.407 cDC L2
ENSG00000125703 ATG4C 650471 sc-eQTL 5.30e-01 -0.0455 0.0723 0.407 cDC L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 3.89e-01 -0.0791 0.0916 0.407 cDC L2
ENSG00000162607 USP1 998306 sc-eQTL 5.26e-01 -0.0518 0.0816 0.407 cDC L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 5.46e-01 -0.0445 0.0737 0.407 cDC L2
ENSG00000079739 PGM1 -158808 sc-eQTL 3.09e-01 0.0797 0.0782 0.41 cMono_IL1B L2
ENSG00000088035 ALG6 67028 sc-eQTL 6.73e-01 0.0332 0.0784 0.41 cMono_IL1B L2
ENSG00000116641 DOCK7 746217 sc-eQTL 4.73e-02 -0.164 0.0819 0.41 cMono_IL1B L2
ENSG00000125703 ATG4C 650471 sc-eQTL 9.69e-01 0.00228 0.0582 0.41 cMono_IL1B L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 7.65e-05 -0.32 0.0794 0.41 cMono_IL1B L2
ENSG00000162607 USP1 998306 sc-eQTL 5.06e-01 0.0483 0.0726 0.41 cMono_IL1B L2
ENSG00000079739 PGM1 -158808 sc-eQTL 7.68e-01 0.0258 0.0872 0.41 cMono_S100A L2
ENSG00000088035 ALG6 67028 sc-eQTL 7.05e-01 -0.0335 0.0884 0.41 cMono_S100A L2
ENSG00000116641 DOCK7 746217 sc-eQTL 9.62e-01 0.00393 0.082 0.41 cMono_S100A L2
ENSG00000125703 ATG4C 650471 sc-eQTL 5.34e-02 0.137 0.0704 0.41 cMono_S100A L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 4.64e-01 -0.0586 0.08 0.41 cMono_S100A L2
ENSG00000162607 USP1 998306 sc-eQTL 1.01e-01 -0.135 0.0819 0.41 cMono_S100A L2
ENSG00000079739 PGM1 -158808 sc-eQTL 6.01e-01 0.0499 0.0951 0.421 gdT L2
ENSG00000088035 ALG6 67028 sc-eQTL 9.45e-01 -0.00707 0.101 0.421 gdT L2
ENSG00000116641 DOCK7 746217 sc-eQTL 9.27e-02 0.167 0.0985 0.421 gdT L2
ENSG00000125703 ATG4C 650471 sc-eQTL 4.47e-01 0.0724 0.0949 0.421 gdT L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 1.98e-01 -0.13 0.1 0.421 gdT L2
ENSG00000162607 USP1 998306 sc-eQTL 6.68e-01 -0.041 0.0955 0.421 gdT L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 6.40e-01 0.0466 0.0993 0.421 gdT L2
ENSG00000079739 PGM1 -158808 sc-eQTL 3.61e-02 0.185 0.0875 0.407 intMono L2
ENSG00000088035 ALG6 67028 sc-eQTL 4.18e-01 0.0667 0.0822 0.407 intMono L2
ENSG00000116641 DOCK7 746217 sc-eQTL 7.20e-01 0.0302 0.0841 0.407 intMono L2
ENSG00000125703 ATG4C 650471 sc-eQTL 4.00e-01 0.0677 0.0802 0.407 intMono L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 8.41e-03 -0.231 0.0869 0.407 intMono L2
ENSG00000162607 USP1 998306 sc-eQTL 8.64e-01 0.0154 0.09 0.407 intMono L2
ENSG00000079739 PGM1 -158808 sc-eQTL 8.12e-01 0.0186 0.0781 0.41 ncMono L2
ENSG00000088035 ALG6 67028 sc-eQTL 1.94e-01 -0.111 0.0854 0.41 ncMono L2
ENSG00000116641 DOCK7 746217 sc-eQTL 1.95e-01 -0.109 0.0841 0.41 ncMono L2
ENSG00000125703 ATG4C 650471 sc-eQTL 1.77e-01 -0.106 0.0785 0.41 ncMono L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 1.61e-01 -0.116 0.0821 0.41 ncMono L2
ENSG00000162607 USP1 998306 sc-eQTL 9.21e-01 0.00836 0.0843 0.41 ncMono L2
ENSG00000079739 PGM1 -158808 sc-eQTL 8.16e-01 -0.0223 0.0953 0.407 pDC L2
ENSG00000088035 ALG6 67028 sc-eQTL 3.15e-01 0.0932 0.0925 0.407 pDC L2
ENSG00000116641 DOCK7 746217 sc-eQTL 1.79e-01 -0.127 0.0943 0.407 pDC L2
ENSG00000125703 ATG4C 650471 sc-eQTL 9.84e-01 0.00172 0.0851 0.407 pDC L2
ENSG00000142856 ITGB3BP -159118 sc-eQTL 9.12e-01 -0.0106 0.0955 0.407 pDC L2
ENSG00000162607 USP1 998306 sc-eQTL 2.39e-01 0.115 0.0969 0.407 pDC L2
ENSG00000203965 EFCAB7 -88769 sc-eQTL 8.40e-01 -0.0171 0.0845 0.407 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -158808 sc-eQTL 6.91e-01 0.0325 0.0814 0.41 B_Memory LOneK1K
ENSG00000088035 ALG6 67028 sc-eQTL 7.00e-01 -0.0347 0.09 0.41 B_Memory LOneK1K
ENSG00000116641 DOCK7 746217 sc-eQTL 5.38e-01 -0.0482 0.0781 0.41 B_Memory LOneK1K
ENSG00000125703 ATG4C 650471 sc-eQTL 1.61e-01 0.0885 0.0629 0.41 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -159118 sc-eQTL 2.09e-03 -0.253 0.0812 0.41 B_Memory LOneK1K
ENSG00000162607 USP1 998306 sc-eQTL 5.43e-01 -0.0491 0.0805 0.41 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -88769 sc-eQTL 4.81e-06 -0.386 0.0823 0.41 B_Memory LOneK1K
ENSG00000079739 PGM1 -158808 sc-eQTL 1.35e-01 0.127 0.0849 0.41 B_Naive LOneK1K
ENSG00000088035 ALG6 67028 sc-eQTL 7.66e-01 0.0262 0.0879 0.41 B_Naive LOneK1K
ENSG00000116641 DOCK7 746217 sc-eQTL 8.36e-01 -0.017 0.082 0.41 B_Naive LOneK1K
ENSG00000125703 ATG4C 650471 sc-eQTL 3.22e-01 -0.0621 0.0625 0.41 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -159118 sc-eQTL 2.90e-07 -0.441 0.0832 0.41 B_Naive LOneK1K
ENSG00000162607 USP1 998306 sc-eQTL 2.80e-01 0.0821 0.0758 0.41 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -88769 sc-eQTL 5.36e-02 -0.171 0.0882 0.41 B_Naive LOneK1K
ENSG00000079739 PGM1 -158808 sc-eQTL 5.61e-01 0.0466 0.0801 0.41 CD14_Mono LOneK1K
ENSG00000088035 ALG6 67028 sc-eQTL 8.93e-01 0.0105 0.0776 0.41 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 746217 sc-eQTL 7.63e-02 -0.138 0.0776 0.41 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 650471 sc-eQTL 2.23e-01 0.0658 0.0538 0.41 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -159118 sc-eQTL 1.97e-03 -0.245 0.0782 0.41 CD14_Mono LOneK1K
ENSG00000162607 USP1 998306 sc-eQTL 4.75e-01 -0.0488 0.0682 0.41 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -158808 sc-eQTL 1.06e-01 0.123 0.0757 0.409 CD16_Mono LOneK1K
ENSG00000088035 ALG6 67028 sc-eQTL 9.63e-01 0.00399 0.0865 0.409 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 746217 sc-eQTL 4.64e-01 -0.0627 0.0855 0.409 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 650471 sc-eQTL 1.90e-01 -0.0955 0.0727 0.409 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -159118 sc-eQTL 5.14e-03 -0.235 0.0832 0.409 CD16_Mono LOneK1K
ENSG00000162607 USP1 998306 sc-eQTL 5.80e-01 0.0441 0.0796 0.409 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -158808 sc-eQTL 7.04e-01 0.0248 0.0653 0.409 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 67028 sc-eQTL 3.65e-01 0.0711 0.0783 0.409 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 746217 sc-eQTL 6.61e-01 0.0308 0.0702 0.409 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 650471 sc-eQTL 7.77e-01 -0.0199 0.0701 0.409 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -159118 sc-eQTL 6.13e-04 -0.281 0.0808 0.409 NK_CD56dim LOneK1K
ENSG00000162607 USP1 998306 sc-eQTL 3.28e-01 0.0739 0.0753 0.409 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -88769 sc-eQTL 7.31e-01 -0.0316 0.0918 0.409 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -158808 eQTL 2.9e-14 0.134 0.0173 0.00812 0.00785 0.417
ENSG00000088035 ALG6 67028 eQTL 1.2e-05 0.0576 0.0131 0.0 0.0 0.417
ENSG00000116641 DOCK7 746235 eQTL 0.0102 -0.0566 0.022 0.0 0.0 0.417
ENSG00000116652 DLEU2L -112479 eQTL 0.000958 -0.0853 0.0257 0.00377 0.00329 0.417
ENSG00000185483 ROR1 -339414 pQTL 0.0126 0.0333 0.0133 0.00116 0.0 0.415
ENSG00000203965 EFCAB7 -88769 eQTL 2.56e-07 -0.123 0.0236 0.00719 0.00696 0.417
ENSG00000230798 FOXD3-AS1 110162 eQTL 0.0272 0.0574 0.0259 0.0 0.0 0.417

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -158808 5.12e-05 5.93e-06 1.3e-06 6.11e-06 1.74e-06 3.88e-06 9.67e-06 8.5e-07 4.88e-06 2.76e-06 6.45e-06 3.41e-06 1.27e-05 2.15e-06 9.98e-07 3.78e-06 3.77e-06 3.8e-06 1.55e-06 1.19e-06 2.75e-06 5.62e-06 5.05e-06 1.91e-06 1.03e-05 2.29e-06 2.51e-06 1.55e-06 7.11e-06 6.62e-06 2.73e-06 7.72e-07 5.21e-07 2.88e-06 3.88e-06 2.56e-06 1.08e-06 1.57e-06 9.38e-07 1.02e-06 8.93e-07 8.58e-06 1.02e-06 1.35e-07 7.7e-07 1.71e-06 1.16e-06 5.05e-07 1.76e-07
ENSG00000088035 ALG6 67028 7.87e-05 1.21e-05 3.01e-06 9.74e-06 2.36e-06 6.19e-06 1.87e-05 1.81e-06 1.05e-05 5.57e-06 1.39e-05 5.59e-06 2.55e-05 4.45e-06 3.87e-06 7.43e-06 8.06e-06 9.73e-06 2.98e-06 2.95e-06 6.46e-06 1.08e-05 1.03e-05 3.39e-06 2.04e-05 4.4e-06 4.86e-06 4.77e-06 1.6e-05 9.19e-06 8.2e-06 1.58e-06 1.25e-06 3.69e-06 6.34e-06 4.37e-06 1.74e-06 2.13e-06 2.17e-06 1.1e-06 1.14e-06 1.48e-05 2.34e-06 1.7e-07 8.46e-07 2.58e-06 2e-06 7.23e-07 4.84e-07