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Genes within 1Mb (chr1:63427329:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -166082 sc-eQTL 2.27e-01 0.0884 0.0729 0.419 B L1
ENSG00000088035 ALG6 59754 sc-eQTL 4.76e-01 0.054 0.0757 0.419 B L1
ENSG00000116641 DOCK7 738943 sc-eQTL 3.18e-01 -0.0757 0.0756 0.419 B L1
ENSG00000125703 ATG4C 643197 sc-eQTL 5.46e-01 -0.0318 0.0526 0.419 B L1
ENSG00000142856 ITGB3BP -166392 sc-eQTL 1.25e-07 -0.429 0.0784 0.419 B L1
ENSG00000162607 USP1 991032 sc-eQTL 6.71e-01 0.0309 0.0727 0.419 B L1
ENSG00000203965 EFCAB7 -96043 sc-eQTL 9.23e-05 -0.33 0.0828 0.419 B L1
ENSG00000079739 PGM1 -166082 sc-eQTL 3.26e-01 0.0619 0.0628 0.419 CD4T L1
ENSG00000088035 ALG6 59754 sc-eQTL 2.81e-01 0.0749 0.0693 0.419 CD4T L1
ENSG00000116641 DOCK7 738943 sc-eQTL 6.51e-01 -0.0319 0.0703 0.419 CD4T L1
ENSG00000125703 ATG4C 643197 sc-eQTL 7.95e-01 0.0148 0.0568 0.419 CD4T L1
ENSG00000142856 ITGB3BP -166392 sc-eQTL 3.05e-08 -0.431 0.075 0.419 CD4T L1
ENSG00000162607 USP1 991032 sc-eQTL 2.14e-01 -0.0684 0.0549 0.419 CD4T L1
ENSG00000203965 EFCAB7 -96043 sc-eQTL 2.32e-03 -0.218 0.0708 0.419 CD4T L1
ENSG00000079739 PGM1 -166082 sc-eQTL 8.04e-01 0.0173 0.0696 0.419 CD8T L1
ENSG00000088035 ALG6 59754 sc-eQTL 7.06e-01 -0.029 0.0768 0.419 CD8T L1
ENSG00000116641 DOCK7 738943 sc-eQTL 5.01e-01 -0.0524 0.0777 0.419 CD8T L1
ENSG00000125703 ATG4C 643197 sc-eQTL 7.39e-01 0.0247 0.0739 0.419 CD8T L1
ENSG00000142856 ITGB3BP -166392 sc-eQTL 1.15e-09 -0.482 0.0757 0.419 CD8T L1
ENSG00000162607 USP1 991032 sc-eQTL 9.63e-01 0.00303 0.0644 0.419 CD8T L1
ENSG00000203965 EFCAB7 -96043 sc-eQTL 1.01e-04 -0.315 0.0795 0.419 CD8T L1
ENSG00000079739 PGM1 -166082 sc-eQTL 2.77e-01 0.0835 0.0766 0.419 DC L1
ENSG00000088035 ALG6 59754 sc-eQTL 1.95e-01 0.103 0.079 0.419 DC L1
ENSG00000116641 DOCK7 738943 sc-eQTL 9.32e-01 0.0069 0.0813 0.419 DC L1
ENSG00000125703 ATG4C 643197 sc-eQTL 7.76e-01 -0.0181 0.0636 0.419 DC L1
ENSG00000142856 ITGB3BP -166392 sc-eQTL 5.06e-01 -0.0592 0.0888 0.419 DC L1
ENSG00000162607 USP1 991032 sc-eQTL 1.67e-01 0.107 0.0773 0.419 DC L1
ENSG00000203965 EFCAB7 -96043 sc-eQTL 1.64e-01 -0.108 0.077 0.419 DC L1
ENSG00000079739 PGM1 -166082 sc-eQTL 4.75e-01 0.0539 0.0752 0.419 Mono L1
ENSG00000088035 ALG6 59754 sc-eQTL 5.15e-01 0.0512 0.0785 0.419 Mono L1
ENSG00000116641 DOCK7 738943 sc-eQTL 1.41e-01 -0.112 0.0756 0.419 Mono L1
ENSG00000125703 ATG4C 643197 sc-eQTL 5.08e-01 0.034 0.0513 0.419 Mono L1
ENSG00000142856 ITGB3BP -166392 sc-eQTL 7.24e-04 -0.271 0.079 0.419 Mono L1
ENSG00000162607 USP1 991032 sc-eQTL 8.18e-01 -0.0154 0.0667 0.419 Mono L1
ENSG00000079739 PGM1 -166082 sc-eQTL 6.69e-01 0.0275 0.0641 0.418 NK L1
ENSG00000088035 ALG6 59754 sc-eQTL 8.95e-02 0.127 0.0747 0.418 NK L1
ENSG00000116641 DOCK7 738943 sc-eQTL 5.31e-01 0.0389 0.0619 0.418 NK L1
ENSG00000125703 ATG4C 643197 sc-eQTL 8.79e-01 -0.0101 0.0665 0.418 NK L1
ENSG00000142856 ITGB3BP -166392 sc-eQTL 5.39e-04 -0.283 0.0804 0.418 NK L1
ENSG00000162607 USP1 991032 sc-eQTL 8.18e-01 0.0171 0.0739 0.418 NK L1
ENSG00000203965 EFCAB7 -96043 sc-eQTL 3.06e-01 -0.0919 0.0896 0.418 NK L1
ENSG00000079739 PGM1 -166082 sc-eQTL 3.22e-01 -0.0727 0.0732 0.419 Other_T L1
ENSG00000088035 ALG6 59754 sc-eQTL 9.32e-01 -0.00629 0.0737 0.419 Other_T L1
ENSG00000116641 DOCK7 738943 sc-eQTL 7.61e-01 0.0229 0.0753 0.419 Other_T L1
ENSG00000125703 ATG4C 643197 sc-eQTL 1.28e-02 0.161 0.0642 0.419 Other_T L1
ENSG00000142856 ITGB3BP -166392 sc-eQTL 3.05e-02 -0.124 0.0571 0.419 Other_T L1
ENSG00000162607 USP1 991032 sc-eQTL 4.76e-01 -0.0357 0.05 0.419 Other_T L1
ENSG00000203965 EFCAB7 -96043 sc-eQTL 3.77e-01 -0.0788 0.089 0.419 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -166082 sc-eQTL 3.59e-01 0.0905 0.0984 0.418 B_Activated L2
ENSG00000088035 ALG6 59754 sc-eQTL 2.28e-01 0.114 0.0941 0.418 B_Activated L2
ENSG00000116641 DOCK7 738943 sc-eQTL 2.44e-01 0.102 0.0876 0.418 B_Activated L2
ENSG00000125703 ATG4C 643197 sc-eQTL 6.54e-01 0.0415 0.0925 0.418 B_Activated L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 8.25e-02 -0.156 0.0896 0.418 B_Activated L2
ENSG00000162607 USP1 991032 sc-eQTL 5.92e-01 -0.0526 0.0979 0.418 B_Activated L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 3.61e-01 -0.0781 0.0854 0.418 B_Activated L2
ENSG00000079739 PGM1 -166082 sc-eQTL 2.80e-01 0.0928 0.0857 0.418 B_Intermediate L2
ENSG00000088035 ALG6 59754 sc-eQTL 4.33e-01 -0.0684 0.0872 0.418 B_Intermediate L2
ENSG00000116641 DOCK7 738943 sc-eQTL 6.14e-01 0.0421 0.0833 0.418 B_Intermediate L2
ENSG00000125703 ATG4C 643197 sc-eQTL 3.38e-02 0.149 0.0698 0.418 B_Intermediate L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 8.11e-03 -0.221 0.0827 0.418 B_Intermediate L2
ENSG00000162607 USP1 991032 sc-eQTL 6.66e-01 -0.0363 0.0839 0.418 B_Intermediate L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 2.00e-03 -0.255 0.0814 0.418 B_Intermediate L2
ENSG00000079739 PGM1 -166082 sc-eQTL 6.68e-01 -0.0364 0.0848 0.418 B_Memory L2
ENSG00000088035 ALG6 59754 sc-eQTL 6.37e-01 0.0407 0.0862 0.418 B_Memory L2
ENSG00000116641 DOCK7 738943 sc-eQTL 1.24e-01 -0.124 0.0804 0.418 B_Memory L2
ENSG00000125703 ATG4C 643197 sc-eQTL 8.02e-01 -0.0193 0.0769 0.418 B_Memory L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 6.16e-02 -0.164 0.0873 0.418 B_Memory L2
ENSG00000162607 USP1 991032 sc-eQTL 1.70e-01 -0.122 0.0884 0.418 B_Memory L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 3.48e-02 -0.184 0.0864 0.418 B_Memory L2
ENSG00000079739 PGM1 -166082 sc-eQTL 1.90e-01 0.113 0.0861 0.419 B_Naive1 L2
ENSG00000088035 ALG6 59754 sc-eQTL 9.00e-01 0.0109 0.0868 0.419 B_Naive1 L2
ENSG00000116641 DOCK7 738943 sc-eQTL 9.67e-01 -0.00348 0.0832 0.419 B_Naive1 L2
ENSG00000125703 ATG4C 643197 sc-eQTL 8.52e-01 -0.012 0.0641 0.419 B_Naive1 L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 9.11e-06 -0.369 0.0811 0.419 B_Naive1 L2
ENSG00000162607 USP1 991032 sc-eQTL 5.44e-01 0.0453 0.0747 0.419 B_Naive1 L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 3.41e-03 -0.263 0.0889 0.419 B_Naive1 L2
ENSG00000079739 PGM1 -166082 sc-eQTL 5.06e-01 0.0569 0.0855 0.418 B_Naive2 L2
ENSG00000088035 ALG6 59754 sc-eQTL 5.39e-01 0.0548 0.0891 0.418 B_Naive2 L2
ENSG00000116641 DOCK7 738943 sc-eQTL 9.97e-01 -0.000335 0.0858 0.418 B_Naive2 L2
ENSG00000125703 ATG4C 643197 sc-eQTL 3.02e-01 -0.0852 0.0823 0.418 B_Naive2 L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 4.75e-06 -0.4 0.0852 0.418 B_Naive2 L2
ENSG00000162607 USP1 991032 sc-eQTL 5.91e-01 0.0459 0.0852 0.418 B_Naive2 L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 1.89e-01 0.117 0.0887 0.418 B_Naive2 L2
ENSG00000079739 PGM1 -166082 sc-eQTL 8.29e-01 -0.0186 0.0861 0.416 CD4_CTL L2
ENSG00000088035 ALG6 59754 sc-eQTL 7.84e-01 -0.025 0.091 0.416 CD4_CTL L2
ENSG00000116641 DOCK7 738943 sc-eQTL 3.06e-01 0.0815 0.0794 0.416 CD4_CTL L2
ENSG00000125703 ATG4C 643197 sc-eQTL 8.72e-01 0.0133 0.0824 0.416 CD4_CTL L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 5.84e-01 -0.0483 0.088 0.416 CD4_CTL L2
ENSG00000162607 USP1 991032 sc-eQTL 8.32e-01 -0.0179 0.0838 0.416 CD4_CTL L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 8.83e-01 0.0123 0.0837 0.416 CD4_CTL L2
ENSG00000079739 PGM1 -166082 sc-eQTL 2.62e-01 0.0789 0.0702 0.419 CD4_Naive L2
ENSG00000088035 ALG6 59754 sc-eQTL 4.22e-01 0.0614 0.0764 0.419 CD4_Naive L2
ENSG00000116641 DOCK7 738943 sc-eQTL 8.69e-01 -0.0124 0.0752 0.419 CD4_Naive L2
ENSG00000125703 ATG4C 643197 sc-eQTL 7.02e-01 0.0255 0.0665 0.419 CD4_Naive L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 1.73e-07 -0.412 0.0761 0.419 CD4_Naive L2
ENSG00000162607 USP1 991032 sc-eQTL 3.26e-01 -0.0609 0.0619 0.419 CD4_Naive L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 2.66e-02 -0.178 0.0797 0.419 CD4_Naive L2
ENSG00000079739 PGM1 -166082 sc-eQTL 9.53e-01 -0.00436 0.0735 0.419 CD4_TCM L2
ENSG00000088035 ALG6 59754 sc-eQTL 8.42e-01 0.017 0.0854 0.419 CD4_TCM L2
ENSG00000116641 DOCK7 738943 sc-eQTL 1.42e-01 -0.111 0.0753 0.419 CD4_TCM L2
ENSG00000125703 ATG4C 643197 sc-eQTL 1.99e-01 -0.0946 0.0734 0.419 CD4_TCM L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 1.22e-04 -0.328 0.0839 0.419 CD4_TCM L2
ENSG00000162607 USP1 991032 sc-eQTL 2.20e-01 -0.0874 0.071 0.419 CD4_TCM L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 1.65e-03 -0.262 0.0821 0.419 CD4_TCM L2
ENSG00000079739 PGM1 -166082 sc-eQTL 6.98e-03 0.231 0.0847 0.419 CD4_TEM L2
ENSG00000088035 ALG6 59754 sc-eQTL 5.89e-01 0.0468 0.0866 0.419 CD4_TEM L2
ENSG00000116641 DOCK7 738943 sc-eQTL 8.55e-01 0.0155 0.0845 0.419 CD4_TEM L2
ENSG00000125703 ATG4C 643197 sc-eQTL 3.83e-01 0.0716 0.0819 0.419 CD4_TEM L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 8.66e-03 -0.221 0.0833 0.419 CD4_TEM L2
ENSG00000162607 USP1 991032 sc-eQTL 4.42e-03 -0.226 0.0787 0.419 CD4_TEM L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 1.52e-01 -0.125 0.0873 0.419 CD4_TEM L2
ENSG00000079739 PGM1 -166082 sc-eQTL 6.21e-01 0.039 0.0786 0.419 CD8_CTL L2
ENSG00000088035 ALG6 59754 sc-eQTL 3.84e-01 -0.0729 0.0835 0.419 CD8_CTL L2
ENSG00000116641 DOCK7 738943 sc-eQTL 4.02e-01 -0.0665 0.0793 0.419 CD8_CTL L2
ENSG00000125703 ATG4C 643197 sc-eQTL 7.00e-02 0.153 0.0838 0.419 CD8_CTL L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 2.07e-02 -0.202 0.0867 0.419 CD8_CTL L2
ENSG00000162607 USP1 991032 sc-eQTL 4.65e-01 0.0576 0.0786 0.419 CD8_CTL L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 2.24e-01 -0.109 0.0897 0.419 CD8_CTL L2
ENSG00000079739 PGM1 -166082 sc-eQTL 1.68e-01 0.11 0.0797 0.419 CD8_Naive L2
ENSG00000088035 ALG6 59754 sc-eQTL 7.49e-01 0.0266 0.0829 0.419 CD8_Naive L2
ENSG00000116641 DOCK7 738943 sc-eQTL 8.52e-01 -0.016 0.0857 0.419 CD8_Naive L2
ENSG00000125703 ATG4C 643197 sc-eQTL 5.71e-01 -0.0466 0.0822 0.419 CD8_Naive L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 6.00e-08 -0.437 0.0777 0.419 CD8_Naive L2
ENSG00000162607 USP1 991032 sc-eQTL 1.29e-01 -0.107 0.0701 0.419 CD8_Naive L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 4.37e-02 -0.158 0.0778 0.419 CD8_Naive L2
ENSG00000079739 PGM1 -166082 sc-eQTL 9.02e-01 -0.0107 0.0867 0.421 CD8_TCM L2
ENSG00000088035 ALG6 59754 sc-eQTL 5.79e-01 -0.0488 0.0878 0.421 CD8_TCM L2
ENSG00000116641 DOCK7 738943 sc-eQTL 6.05e-01 -0.0444 0.0857 0.421 CD8_TCM L2
ENSG00000125703 ATG4C 643197 sc-eQTL 5.45e-01 -0.0531 0.0876 0.421 CD8_TCM L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 9.05e-02 -0.144 0.0846 0.421 CD8_TCM L2
ENSG00000162607 USP1 991032 sc-eQTL 6.26e-01 -0.04 0.0819 0.421 CD8_TCM L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 1.10e-01 -0.138 0.0863 0.421 CD8_TCM L2
ENSG00000079739 PGM1 -166082 sc-eQTL 1.42e-01 -0.131 0.089 0.404 CD8_TEM L2
ENSG00000088035 ALG6 59754 sc-eQTL 6.90e-01 0.0358 0.0898 0.404 CD8_TEM L2
ENSG00000116641 DOCK7 738943 sc-eQTL 3.16e-01 -0.0874 0.0869 0.404 CD8_TEM L2
ENSG00000125703 ATG4C 643197 sc-eQTL 2.90e-02 0.182 0.0827 0.404 CD8_TEM L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 2.48e-02 -0.202 0.0895 0.404 CD8_TEM L2
ENSG00000162607 USP1 991032 sc-eQTL 5.84e-01 0.0475 0.0864 0.404 CD8_TEM L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 4.25e-02 -0.178 0.087 0.404 CD8_TEM L2
ENSG00000079739 PGM1 -166082 sc-eQTL 5.98e-01 -0.0451 0.0854 0.418 MAIT L2
ENSG00000088035 ALG6 59754 sc-eQTL 4.92e-01 -0.0582 0.0844 0.418 MAIT L2
ENSG00000116641 DOCK7 738943 sc-eQTL 7.81e-01 0.0226 0.081 0.418 MAIT L2
ENSG00000125703 ATG4C 643197 sc-eQTL 6.48e-02 0.157 0.0847 0.418 MAIT L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 1.08e-02 -0.217 0.0842 0.418 MAIT L2
ENSG00000162607 USP1 991032 sc-eQTL 3.27e-01 -0.0833 0.0847 0.418 MAIT L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 9.88e-01 -0.00138 0.0881 0.418 MAIT L2
ENSG00000079739 PGM1 -166082 sc-eQTL 8.29e-01 0.0184 0.085 0.418 NK_CD56bright L2
ENSG00000088035 ALG6 59754 sc-eQTL 9.02e-02 0.147 0.0865 0.418 NK_CD56bright L2
ENSG00000116641 DOCK7 738943 sc-eQTL 5.49e-01 0.0452 0.0754 0.418 NK_CD56bright L2
ENSG00000125703 ATG4C 643197 sc-eQTL 9.62e-01 -0.00406 0.0843 0.418 NK_CD56bright L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 6.19e-01 -0.0437 0.0877 0.418 NK_CD56bright L2
ENSG00000162607 USP1 991032 sc-eQTL 6.86e-01 -0.0367 0.0905 0.418 NK_CD56bright L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 7.43e-02 -0.154 0.0859 0.418 NK_CD56bright L2
ENSG00000079739 PGM1 -166082 sc-eQTL 8.87e-01 0.00947 0.0664 0.418 NK_CD56dim L2
ENSG00000088035 ALG6 59754 sc-eQTL 5.45e-01 0.0511 0.0842 0.418 NK_CD56dim L2
ENSG00000116641 DOCK7 738943 sc-eQTL 8.24e-01 -0.0163 0.0733 0.418 NK_CD56dim L2
ENSG00000125703 ATG4C 643197 sc-eQTL 3.32e-02 -0.158 0.0737 0.418 NK_CD56dim L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 1.61e-01 -0.119 0.0844 0.418 NK_CD56dim L2
ENSG00000162607 USP1 991032 sc-eQTL 8.76e-01 0.0129 0.0822 0.418 NK_CD56dim L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 6.07e-01 -0.0472 0.0915 0.418 NK_CD56dim L2
ENSG00000079739 PGM1 -166082 sc-eQTL 9.08e-01 -0.0106 0.0916 0.422 NK_HLA L2
ENSG00000088035 ALG6 59754 sc-eQTL 3.30e-01 0.0926 0.0947 0.422 NK_HLA L2
ENSG00000116641 DOCK7 738943 sc-eQTL 5.62e-01 -0.0421 0.0726 0.422 NK_HLA L2
ENSG00000125703 ATG4C 643197 sc-eQTL 8.48e-01 0.0162 0.0844 0.422 NK_HLA L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 7.41e-02 -0.158 0.088 0.422 NK_HLA L2
ENSG00000162607 USP1 991032 sc-eQTL 6.17e-01 -0.0465 0.0927 0.422 NK_HLA L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 3.57e-01 0.0778 0.0843 0.422 NK_HLA L2
ENSG00000079739 PGM1 -166082 sc-eQTL 4.16e-01 0.0595 0.073 0.418 NK_cytokine L2
ENSG00000088035 ALG6 59754 sc-eQTL 7.97e-01 0.0213 0.0827 0.418 NK_cytokine L2
ENSG00000116641 DOCK7 738943 sc-eQTL 7.35e-01 0.026 0.0766 0.418 NK_cytokine L2
ENSG00000125703 ATG4C 643197 sc-eQTL 1.23e-01 0.121 0.0779 0.418 NK_cytokine L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 1.97e-03 -0.249 0.0793 0.418 NK_cytokine L2
ENSG00000162607 USP1 991032 sc-eQTL 1.98e-01 0.11 0.085 0.418 NK_cytokine L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 9.91e-01 0.000939 0.0865 0.418 NK_cytokine L2
ENSG00000079739 PGM1 -166082 sc-eQTL 2.66e-01 -0.12 0.107 0.415 PB L2
ENSG00000088035 ALG6 59754 sc-eQTL 7.65e-01 0.0338 0.113 0.415 PB L2
ENSG00000116641 DOCK7 738943 sc-eQTL 8.73e-02 -0.206 0.119 0.415 PB L2
ENSG00000125703 ATG4C 643197 sc-eQTL 7.25e-01 0.0371 0.105 0.415 PB L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 7.09e-02 -0.189 0.104 0.415 PB L2
ENSG00000162607 USP1 991032 sc-eQTL 5.64e-01 0.0604 0.104 0.415 PB L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 1.12e-01 -0.183 0.114 0.415 PB L2
ENSG00000079739 PGM1 -166082 sc-eQTL 3.36e-01 -0.0769 0.0797 0.417 Pro_T L2
ENSG00000088035 ALG6 59754 sc-eQTL 9.52e-01 0.00494 0.0813 0.417 Pro_T L2
ENSG00000116641 DOCK7 738943 sc-eQTL 2.65e-01 -0.0908 0.0813 0.417 Pro_T L2
ENSG00000125703 ATG4C 643197 sc-eQTL 3.59e-01 -0.0655 0.0712 0.417 Pro_T L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 1.53e-01 0.102 0.0713 0.417 Pro_T L2
ENSG00000162607 USP1 991032 sc-eQTL 3.89e-01 -0.0424 0.0491 0.417 Pro_T L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 7.33e-01 0.0284 0.0832 0.417 Pro_T L2
ENSG00000079739 PGM1 -166082 sc-eQTL 6.99e-01 -0.0324 0.0838 0.419 Treg L2
ENSG00000088035 ALG6 59754 sc-eQTL 1.48e-01 0.13 0.0892 0.419 Treg L2
ENSG00000116641 DOCK7 738943 sc-eQTL 6.49e-01 0.0374 0.0823 0.419 Treg L2
ENSG00000125703 ATG4C 643197 sc-eQTL 5.26e-01 0.0534 0.084 0.419 Treg L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 6.44e-01 0.0407 0.088 0.419 Treg L2
ENSG00000162607 USP1 991032 sc-eQTL 4.52e-01 0.064 0.085 0.419 Treg L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 7.68e-01 -0.0249 0.0842 0.419 Treg L2
ENSG00000079739 PGM1 -166082 sc-eQTL 8.38e-01 0.017 0.0829 0.415 cDC L2
ENSG00000088035 ALG6 59754 sc-eQTL 5.97e-01 -0.0445 0.084 0.415 cDC L2
ENSG00000116641 DOCK7 738943 sc-eQTL 6.45e-01 0.0381 0.0825 0.415 cDC L2
ENSG00000125703 ATG4C 643197 sc-eQTL 7.28e-01 -0.0249 0.0716 0.415 cDC L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 4.40e-01 -0.0702 0.0907 0.415 cDC L2
ENSG00000162607 USP1 991032 sc-eQTL 7.21e-01 -0.029 0.0808 0.415 cDC L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 6.09e-01 -0.0374 0.0729 0.415 cDC L2
ENSG00000079739 PGM1 -166082 sc-eQTL 2.47e-01 0.0904 0.0779 0.419 cMono_IL1B L2
ENSG00000088035 ALG6 59754 sc-eQTL 6.40e-01 0.0367 0.0782 0.419 cMono_IL1B L2
ENSG00000116641 DOCK7 738943 sc-eQTL 6.51e-02 -0.152 0.0818 0.419 cMono_IL1B L2
ENSG00000125703 ATG4C 643197 sc-eQTL 9.59e-01 -0.00297 0.058 0.419 cMono_IL1B L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 6.11e-05 -0.323 0.0791 0.419 cMono_IL1B L2
ENSG00000162607 USP1 991032 sc-eQTL 6.71e-01 0.0308 0.0724 0.419 cMono_IL1B L2
ENSG00000079739 PGM1 -166082 sc-eQTL 7.94e-01 0.0228 0.087 0.419 cMono_S100A L2
ENSG00000088035 ALG6 59754 sc-eQTL 8.35e-01 -0.0184 0.0882 0.419 cMono_S100A L2
ENSG00000116641 DOCK7 738943 sc-eQTL 6.40e-01 0.0383 0.0817 0.419 cMono_S100A L2
ENSG00000125703 ATG4C 643197 sc-eQTL 1.66e-01 0.0979 0.0705 0.419 cMono_S100A L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 4.73e-01 -0.0573 0.0797 0.419 cMono_S100A L2
ENSG00000162607 USP1 991032 sc-eQTL 4.73e-02 -0.162 0.0814 0.419 cMono_S100A L2
ENSG00000079739 PGM1 -166082 sc-eQTL 7.60e-01 0.0289 0.0942 0.43 gdT L2
ENSG00000088035 ALG6 59754 sc-eQTL 9.61e-01 -0.00493 0.1 0.43 gdT L2
ENSG00000116641 DOCK7 738943 sc-eQTL 1.50e-01 0.142 0.0978 0.43 gdT L2
ENSG00000125703 ATG4C 643197 sc-eQTL 2.97e-01 0.0981 0.0937 0.43 gdT L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 1.83e-01 -0.133 0.0993 0.43 gdT L2
ENSG00000162607 USP1 991032 sc-eQTL 7.68e-01 -0.0279 0.0945 0.43 gdT L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 8.18e-01 0.0226 0.0983 0.43 gdT L2
ENSG00000079739 PGM1 -166082 sc-eQTL 5.19e-02 0.171 0.0873 0.416 intMono L2
ENSG00000088035 ALG6 59754 sc-eQTL 5.31e-01 0.0514 0.082 0.416 intMono L2
ENSG00000116641 DOCK7 738943 sc-eQTL 8.10e-01 0.0201 0.0838 0.416 intMono L2
ENSG00000125703 ATG4C 643197 sc-eQTL 3.19e-01 0.0798 0.0798 0.416 intMono L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 4.78e-03 -0.247 0.0864 0.416 intMono L2
ENSG00000162607 USP1 991032 sc-eQTL 8.67e-01 0.015 0.0896 0.416 intMono L2
ENSG00000079739 PGM1 -166082 sc-eQTL 8.25e-01 0.0172 0.0777 0.419 ncMono L2
ENSG00000088035 ALG6 59754 sc-eQTL 2.90e-01 -0.0903 0.0852 0.419 ncMono L2
ENSG00000116641 DOCK7 738943 sc-eQTL 2.02e-01 -0.107 0.0837 0.419 ncMono L2
ENSG00000125703 ATG4C 643197 sc-eQTL 3.73e-01 -0.0699 0.0784 0.419 ncMono L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 2.42e-01 -0.0961 0.0819 0.419 ncMono L2
ENSG00000162607 USP1 991032 sc-eQTL 7.45e-01 0.0274 0.0839 0.419 ncMono L2
ENSG00000079739 PGM1 -166082 sc-eQTL 8.70e-01 -0.0154 0.0944 0.415 pDC L2
ENSG00000088035 ALG6 59754 sc-eQTL 2.95e-01 0.0962 0.0916 0.415 pDC L2
ENSG00000116641 DOCK7 738943 sc-eQTL 9.45e-02 -0.156 0.093 0.415 pDC L2
ENSG00000125703 ATG4C 643197 sc-eQTL 7.04e-01 0.0321 0.0842 0.415 pDC L2
ENSG00000142856 ITGB3BP -166392 sc-eQTL 6.47e-01 -0.0433 0.0945 0.415 pDC L2
ENSG00000162607 USP1 991032 sc-eQTL 2.03e-01 0.123 0.0958 0.415 pDC L2
ENSG00000203965 EFCAB7 -96043 sc-eQTL 6.63e-01 -0.0365 0.0836 0.415 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -166082 sc-eQTL 6.43e-01 0.0375 0.0809 0.419 B_Memory LOneK1K
ENSG00000088035 ALG6 59754 sc-eQTL 7.66e-01 -0.0267 0.0895 0.419 B_Memory LOneK1K
ENSG00000116641 DOCK7 738943 sc-eQTL 6.30e-01 -0.0374 0.0776 0.419 B_Memory LOneK1K
ENSG00000125703 ATG4C 643197 sc-eQTL 8.94e-02 0.106 0.0624 0.419 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -166392 sc-eQTL 2.55e-03 -0.247 0.0808 0.419 B_Memory LOneK1K
ENSG00000162607 USP1 991032 sc-eQTL 4.93e-01 -0.055 0.08 0.419 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -96043 sc-eQTL 1.26e-05 -0.368 0.0822 0.419 B_Memory LOneK1K
ENSG00000079739 PGM1 -166082 sc-eQTL 1.48e-01 0.122 0.0841 0.419 B_Naive LOneK1K
ENSG00000088035 ALG6 59754 sc-eQTL 6.65e-01 0.0378 0.087 0.419 B_Naive LOneK1K
ENSG00000116641 DOCK7 738943 sc-eQTL 7.65e-01 -0.0243 0.0812 0.419 B_Naive LOneK1K
ENSG00000125703 ATG4C 643197 sc-eQTL 2.50e-01 -0.0712 0.0618 0.419 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -166392 sc-eQTL 2.09e-07 -0.441 0.0822 0.419 B_Naive LOneK1K
ENSG00000162607 USP1 991032 sc-eQTL 2.53e-01 0.0861 0.0751 0.419 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -96043 sc-eQTL 9.75e-02 -0.146 0.0876 0.419 B_Naive LOneK1K
ENSG00000079739 PGM1 -166082 sc-eQTL 4.98e-01 0.0542 0.0799 0.419 CD14_Mono LOneK1K
ENSG00000088035 ALG6 59754 sc-eQTL 8.07e-01 0.0189 0.0774 0.419 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 738943 sc-eQTL 1.27e-01 -0.119 0.0775 0.419 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 643197 sc-eQTL 3.79e-01 0.0474 0.0538 0.419 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -166392 sc-eQTL 1.95e-03 -0.244 0.0779 0.419 CD14_Mono LOneK1K
ENSG00000162607 USP1 991032 sc-eQTL 2.92e-01 -0.0718 0.0679 0.419 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -166082 sc-eQTL 1.39e-01 0.112 0.0756 0.418 CD16_Mono LOneK1K
ENSG00000088035 ALG6 59754 sc-eQTL 8.87e-01 0.0123 0.0862 0.418 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 738943 sc-eQTL 4.66e-01 -0.0622 0.0852 0.418 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 643197 sc-eQTL 3.97e-01 -0.0617 0.0726 0.418 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -166392 sc-eQTL 6.93e-03 -0.226 0.083 0.418 CD16_Mono LOneK1K
ENSG00000162607 USP1 991032 sc-eQTL 4.63e-01 0.0583 0.0793 0.418 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -166082 sc-eQTL 7.75e-01 0.0186 0.0651 0.418 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 59754 sc-eQTL 2.85e-01 0.0837 0.078 0.418 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 738943 sc-eQTL 7.52e-01 0.0221 0.0701 0.418 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 643197 sc-eQTL 9.73e-01 -0.00236 0.07 0.418 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -166392 sc-eQTL 8.02e-04 -0.275 0.0807 0.418 NK_CD56dim LOneK1K
ENSG00000162607 USP1 991032 sc-eQTL 4.17e-01 0.0611 0.0751 0.418 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -96043 sc-eQTL 7.49e-01 -0.0293 0.0915 0.418 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -166082 eQTL 1.1e-13 0.131 0.0174 0.00337 0.00326 0.419
ENSG00000088035 ALG6 59754 eQTL 7.92e-06 0.059 0.0131 0.0 0.0 0.419
ENSG00000116641 DOCK7 738961 eQTL 0.0123 -0.0554 0.0221 0.0 0.0 0.419
ENSG00000116652 DLEU2L -119753 eQTL 0.000594 -0.0889 0.0258 0.0051 0.00498 0.419
ENSG00000185483 ROR1 -346688 pQTL 0.00769 0.0356 0.0133 0.00144 0.0 0.416
ENSG00000203965 EFCAB7 -96043 eQTL 1.02e-07 -0.127 0.0237 0.0179 0.017 0.419
ENSG00000230798 FOXD3-AS1 102888 eQTL 0.0305 0.0564 0.026 0.0 0.0 0.419

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -166082 3.18e-06 2.81e-06 5.75e-07 1.98e-06 8.7e-07 7.11e-07 2.31e-06 1e-06 2.43e-06 1.35e-06 2.77e-06 1.72e-06 4.26e-06 1.44e-06 9.22e-07 2.03e-06 1.58e-06 2.15e-06 1.56e-06 1.05e-06 1.64e-06 3.37e-06 2.94e-06 1.8e-06 4.08e-06 1.23e-06 1.57e-06 1.74e-06 3.22e-06 2.55e-06 2.03e-06 4.56e-07 7.5e-07 1.59e-06 1.65e-06 9.36e-07 9.08e-07 4.09e-07 1.39e-06 3.64e-07 4.52e-07 3.87e-06 6.14e-07 1.96e-07 3.81e-07 3.6e-07 8.3e-07 2.62e-07 2.56e-07
ENSG00000088035 ALG6 59754 7.88e-06 9.31e-06 1.34e-06 4.85e-06 2.42e-06 4.01e-06 1.02e-05 2.13e-06 8.59e-06 5.08e-06 1.08e-05 5.16e-06 1.36e-05 3.95e-06 2.62e-06 6.41e-06 4.09e-06 7.32e-06 2.72e-06 2.84e-06 5.26e-06 8.57e-06 7.47e-06 3.38e-06 1.29e-05 4.31e-06 4.84e-06 3.89e-06 1.02e-05 8.81e-06 4.73e-06 1.08e-06 1.2e-06 3.6e-06 3.99e-06 2.77e-06 1.77e-06 1.91e-06 2.01e-06 1.11e-06 1.3e-06 1.16e-05 1.26e-06 2.71e-07 9.39e-07 1.78e-06 1.78e-06 8.24e-07 4.56e-07