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Genes within 1Mb (chr1:63422895:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -170516 sc-eQTL 2.31e-01 0.0871 0.0725 0.421 B L1
ENSG00000088035 ALG6 55320 sc-eQTL 4.87e-01 0.0523 0.0752 0.421 B L1
ENSG00000116641 DOCK7 734509 sc-eQTL 3.18e-01 -0.0752 0.0751 0.421 B L1
ENSG00000125703 ATG4C 638763 sc-eQTL 4.38e-01 -0.0407 0.0523 0.421 B L1
ENSG00000142856 ITGB3BP -170826 sc-eQTL 8.91e-08 -0.431 0.0778 0.421 B L1
ENSG00000162607 USP1 986598 sc-eQTL 7.28e-01 0.0252 0.0723 0.421 B L1
ENSG00000203965 EFCAB7 -100477 sc-eQTL 8.18e-05 -0.33 0.0823 0.421 B L1
ENSG00000079739 PGM1 -170516 sc-eQTL 3.37e-01 0.0601 0.0624 0.421 CD4T L1
ENSG00000088035 ALG6 55320 sc-eQTL 3.13e-01 0.0696 0.0689 0.421 CD4T L1
ENSG00000116641 DOCK7 734509 sc-eQTL 5.61e-01 -0.0406 0.0698 0.421 CD4T L1
ENSG00000125703 ATG4C 638763 sc-eQTL 8.04e-01 0.0141 0.0564 0.421 CD4T L1
ENSG00000142856 ITGB3BP -170826 sc-eQTL 1.54e-08 -0.437 0.0742 0.421 CD4T L1
ENSG00000162607 USP1 986598 sc-eQTL 2.96e-01 -0.0572 0.0546 0.421 CD4T L1
ENSG00000203965 EFCAB7 -100477 sc-eQTL 1.38e-03 -0.228 0.0702 0.421 CD4T L1
ENSG00000079739 PGM1 -170516 sc-eQTL 7.98e-01 0.0177 0.0692 0.421 CD8T L1
ENSG00000088035 ALG6 55320 sc-eQTL 6.03e-01 -0.0397 0.0763 0.421 CD8T L1
ENSG00000116641 DOCK7 734509 sc-eQTL 5.85e-01 -0.0423 0.0773 0.421 CD8T L1
ENSG00000125703 ATG4C 638763 sc-eQTL 7.11e-01 0.0273 0.0734 0.421 CD8T L1
ENSG00000142856 ITGB3BP -170826 sc-eQTL 2.23e-09 -0.472 0.0755 0.421 CD8T L1
ENSG00000162607 USP1 986598 sc-eQTL 9.44e-01 0.00452 0.064 0.421 CD8T L1
ENSG00000203965 EFCAB7 -100477 sc-eQTL 8.67e-05 -0.316 0.079 0.421 CD8T L1
ENSG00000079739 PGM1 -170516 sc-eQTL 2.77e-01 0.0835 0.0766 0.419 DC L1
ENSG00000088035 ALG6 55320 sc-eQTL 1.95e-01 0.103 0.079 0.419 DC L1
ENSG00000116641 DOCK7 734509 sc-eQTL 9.32e-01 0.0069 0.0813 0.419 DC L1
ENSG00000125703 ATG4C 638763 sc-eQTL 7.76e-01 -0.0181 0.0636 0.419 DC L1
ENSG00000142856 ITGB3BP -170826 sc-eQTL 5.06e-01 -0.0592 0.0888 0.419 DC L1
ENSG00000162607 USP1 986598 sc-eQTL 1.67e-01 0.107 0.0773 0.419 DC L1
ENSG00000203965 EFCAB7 -100477 sc-eQTL 1.64e-01 -0.108 0.077 0.419 DC L1
ENSG00000079739 PGM1 -170516 sc-eQTL 5.58e-01 0.0439 0.0748 0.421 Mono L1
ENSG00000088035 ALG6 55320 sc-eQTL 5.20e-01 0.0503 0.0781 0.421 Mono L1
ENSG00000116641 DOCK7 734509 sc-eQTL 1.55e-01 -0.107 0.0752 0.421 Mono L1
ENSG00000125703 ATG4C 638763 sc-eQTL 5.30e-01 0.0321 0.051 0.421 Mono L1
ENSG00000142856 ITGB3BP -170826 sc-eQTL 7.24e-04 -0.27 0.0786 0.421 Mono L1
ENSG00000162607 USP1 986598 sc-eQTL 9.94e-01 -0.000515 0.0663 0.421 Mono L1
ENSG00000079739 PGM1 -170516 sc-eQTL 7.49e-01 0.0205 0.0639 0.421 NK L1
ENSG00000088035 ALG6 55320 sc-eQTL 5.47e-02 0.144 0.0743 0.421 NK L1
ENSG00000116641 DOCK7 734509 sc-eQTL 6.60e-01 0.0272 0.0617 0.421 NK L1
ENSG00000125703 ATG4C 638763 sc-eQTL 8.27e-01 -0.0145 0.0663 0.421 NK L1
ENSG00000142856 ITGB3BP -170826 sc-eQTL 3.84e-04 -0.289 0.0799 0.421 NK L1
ENSG00000162607 USP1 986598 sc-eQTL 6.28e-01 0.0357 0.0736 0.421 NK L1
ENSG00000203965 EFCAB7 -100477 sc-eQTL 2.36e-01 -0.106 0.0892 0.421 NK L1
ENSG00000079739 PGM1 -170516 sc-eQTL 2.59e-01 -0.0823 0.0727 0.421 Other_T L1
ENSG00000088035 ALG6 55320 sc-eQTL 9.21e-01 -0.00731 0.0733 0.421 Other_T L1
ENSG00000116641 DOCK7 734509 sc-eQTL 7.68e-01 0.0221 0.0748 0.421 Other_T L1
ENSG00000125703 ATG4C 638763 sc-eQTL 1.60e-02 0.155 0.0639 0.421 Other_T L1
ENSG00000142856 ITGB3BP -170826 sc-eQTL 3.16e-02 -0.123 0.0568 0.421 Other_T L1
ENSG00000162607 USP1 986598 sc-eQTL 5.19e-01 -0.0321 0.0497 0.421 Other_T L1
ENSG00000203965 EFCAB7 -100477 sc-eQTL 2.93e-01 -0.0931 0.0884 0.421 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -170516 sc-eQTL 3.59e-01 0.0905 0.0984 0.418 B_Activated L2
ENSG00000088035 ALG6 55320 sc-eQTL 2.28e-01 0.114 0.0941 0.418 B_Activated L2
ENSG00000116641 DOCK7 734509 sc-eQTL 2.44e-01 0.102 0.0876 0.418 B_Activated L2
ENSG00000125703 ATG4C 638763 sc-eQTL 6.54e-01 0.0415 0.0925 0.418 B_Activated L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 8.25e-02 -0.156 0.0896 0.418 B_Activated L2
ENSG00000162607 USP1 986598 sc-eQTL 5.92e-01 -0.0526 0.0979 0.418 B_Activated L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 3.61e-01 -0.0781 0.0854 0.418 B_Activated L2
ENSG00000079739 PGM1 -170516 sc-eQTL 2.74e-01 0.0942 0.0859 0.421 B_Intermediate L2
ENSG00000088035 ALG6 55320 sc-eQTL 4.39e-01 -0.0677 0.0874 0.421 B_Intermediate L2
ENSG00000116641 DOCK7 734509 sc-eQTL 6.28e-01 0.0405 0.0835 0.421 B_Intermediate L2
ENSG00000125703 ATG4C 638763 sc-eQTL 3.52e-02 0.148 0.07 0.421 B_Intermediate L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 7.40e-03 -0.224 0.0828 0.421 B_Intermediate L2
ENSG00000162607 USP1 986598 sc-eQTL 6.81e-01 -0.0346 0.0841 0.421 B_Intermediate L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 2.14e-03 -0.254 0.0816 0.421 B_Intermediate L2
ENSG00000079739 PGM1 -170516 sc-eQTL 6.17e-01 -0.0423 0.0844 0.42 B_Memory L2
ENSG00000088035 ALG6 55320 sc-eQTL 6.85e-01 0.0349 0.0858 0.42 B_Memory L2
ENSG00000116641 DOCK7 734509 sc-eQTL 1.41e-01 -0.118 0.0801 0.42 B_Memory L2
ENSG00000125703 ATG4C 638763 sc-eQTL 9.22e-01 -0.00751 0.0765 0.42 B_Memory L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 6.77e-02 -0.16 0.0869 0.42 B_Memory L2
ENSG00000162607 USP1 986598 sc-eQTL 1.54e-01 -0.126 0.0879 0.42 B_Memory L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 3.57e-02 -0.182 0.086 0.42 B_Memory L2
ENSG00000079739 PGM1 -170516 sc-eQTL 2.07e-01 0.108 0.0857 0.421 B_Naive1 L2
ENSG00000088035 ALG6 55320 sc-eQTL 9.75e-01 0.00269 0.0863 0.421 B_Naive1 L2
ENSG00000116641 DOCK7 734509 sc-eQTL 9.37e-01 0.00655 0.0827 0.421 B_Naive1 L2
ENSG00000125703 ATG4C 638763 sc-eQTL 7.94e-01 -0.0167 0.0637 0.421 B_Naive1 L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 9.19e-06 -0.367 0.0807 0.421 B_Naive1 L2
ENSG00000162607 USP1 986598 sc-eQTL 5.32e-01 0.0464 0.0742 0.421 B_Naive1 L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 2.40e-03 -0.271 0.0882 0.421 B_Naive1 L2
ENSG00000079739 PGM1 -170516 sc-eQTL 5.18e-01 0.055 0.085 0.421 B_Naive2 L2
ENSG00000088035 ALG6 55320 sc-eQTL 4.90e-01 0.0614 0.0886 0.421 B_Naive2 L2
ENSG00000116641 DOCK7 734509 sc-eQTL 9.83e-01 -0.00185 0.0853 0.421 B_Naive2 L2
ENSG00000125703 ATG4C 638763 sc-eQTL 2.75e-01 -0.0896 0.0819 0.421 B_Naive2 L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 6.56e-06 -0.392 0.0848 0.421 B_Naive2 L2
ENSG00000162607 USP1 986598 sc-eQTL 6.87e-01 0.0341 0.0848 0.421 B_Naive2 L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 1.31e-01 0.134 0.0882 0.421 B_Naive2 L2
ENSG00000079739 PGM1 -170516 sc-eQTL 7.91e-01 -0.0227 0.0856 0.418 CD4_CTL L2
ENSG00000088035 ALG6 55320 sc-eQTL 7.80e-01 -0.0254 0.0905 0.418 CD4_CTL L2
ENSG00000116641 DOCK7 734509 sc-eQTL 2.92e-01 0.0834 0.0789 0.418 CD4_CTL L2
ENSG00000125703 ATG4C 638763 sc-eQTL 8.97e-01 0.0106 0.0819 0.418 CD4_CTL L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 5.49e-01 -0.0526 0.0875 0.418 CD4_CTL L2
ENSG00000162607 USP1 986598 sc-eQTL 9.51e-01 -0.00513 0.0834 0.418 CD4_CTL L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 8.74e-01 0.0132 0.0832 0.418 CD4_CTL L2
ENSG00000079739 PGM1 -170516 sc-eQTL 2.75e-01 0.0765 0.0698 0.421 CD4_Naive L2
ENSG00000088035 ALG6 55320 sc-eQTL 4.69e-01 0.0551 0.076 0.421 CD4_Naive L2
ENSG00000116641 DOCK7 734509 sc-eQTL 8.29e-01 -0.0162 0.0747 0.421 CD4_Naive L2
ENSG00000125703 ATG4C 638763 sc-eQTL 6.80e-01 0.0273 0.0661 0.421 CD4_Naive L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 1.19e-07 -0.414 0.0756 0.421 CD4_Naive L2
ENSG00000162607 USP1 986598 sc-eQTL 4.00e-01 -0.0519 0.0616 0.421 CD4_Naive L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 1.63e-02 -0.191 0.0791 0.421 CD4_Naive L2
ENSG00000079739 PGM1 -170516 sc-eQTL 9.23e-01 -0.00703 0.0731 0.421 CD4_TCM L2
ENSG00000088035 ALG6 55320 sc-eQTL 8.26e-01 0.0186 0.0848 0.421 CD4_TCM L2
ENSG00000116641 DOCK7 734509 sc-eQTL 9.65e-02 -0.125 0.0747 0.421 CD4_TCM L2
ENSG00000125703 ATG4C 638763 sc-eQTL 2.35e-01 -0.087 0.0729 0.421 CD4_TCM L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 8.76e-05 -0.333 0.0832 0.421 CD4_TCM L2
ENSG00000162607 USP1 986598 sc-eQTL 2.69e-01 -0.0782 0.0705 0.421 CD4_TCM L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 1.70e-03 -0.259 0.0816 0.421 CD4_TCM L2
ENSG00000079739 PGM1 -170516 sc-eQTL 7.24e-03 0.229 0.0843 0.421 CD4_TEM L2
ENSG00000088035 ALG6 55320 sc-eQTL 6.54e-01 0.0387 0.0861 0.421 CD4_TEM L2
ENSG00000116641 DOCK7 734509 sc-eQTL 8.99e-01 0.0106 0.084 0.421 CD4_TEM L2
ENSG00000125703 ATG4C 638763 sc-eQTL 3.77e-01 0.0721 0.0814 0.421 CD4_TEM L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 7.45e-03 -0.224 0.0828 0.421 CD4_TEM L2
ENSG00000162607 USP1 986598 sc-eQTL 5.42e-03 -0.22 0.0783 0.421 CD4_TEM L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 1.39e-01 -0.129 0.0868 0.421 CD4_TEM L2
ENSG00000079739 PGM1 -170516 sc-eQTL 6.96e-01 0.0307 0.0783 0.421 CD8_CTL L2
ENSG00000088035 ALG6 55320 sc-eQTL 3.05e-01 -0.0854 0.0831 0.421 CD8_CTL L2
ENSG00000116641 DOCK7 734509 sc-eQTL 3.72e-01 -0.0706 0.0789 0.421 CD8_CTL L2
ENSG00000125703 ATG4C 638763 sc-eQTL 9.12e-02 0.142 0.0836 0.421 CD8_CTL L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 2.83e-02 -0.191 0.0865 0.421 CD8_CTL L2
ENSG00000162607 USP1 986598 sc-eQTL 4.68e-01 0.0569 0.0783 0.421 CD8_CTL L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 1.88e-01 -0.118 0.0893 0.421 CD8_CTL L2
ENSG00000079739 PGM1 -170516 sc-eQTL 1.09e-01 0.127 0.0792 0.421 CD8_Naive L2
ENSG00000088035 ALG6 55320 sc-eQTL 8.20e-01 0.0188 0.0824 0.421 CD8_Naive L2
ENSG00000116641 DOCK7 734509 sc-eQTL 9.45e-01 -0.00591 0.0852 0.421 CD8_Naive L2
ENSG00000125703 ATG4C 638763 sc-eQTL 6.92e-01 -0.0325 0.0818 0.421 CD8_Naive L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 7.30e-08 -0.432 0.0774 0.421 CD8_Naive L2
ENSG00000162607 USP1 986598 sc-eQTL 1.35e-01 -0.104 0.0697 0.421 CD8_Naive L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 2.95e-02 -0.169 0.0772 0.421 CD8_Naive L2
ENSG00000079739 PGM1 -170516 sc-eQTL 9.29e-01 -0.00773 0.0867 0.424 CD8_TCM L2
ENSG00000088035 ALG6 55320 sc-eQTL 5.75e-01 -0.0492 0.0877 0.424 CD8_TCM L2
ENSG00000116641 DOCK7 734509 sc-eQTL 6.05e-01 -0.0443 0.0856 0.424 CD8_TCM L2
ENSG00000125703 ATG4C 638763 sc-eQTL 5.86e-01 -0.0477 0.0876 0.424 CD8_TCM L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 8.80e-02 -0.145 0.0845 0.424 CD8_TCM L2
ENSG00000162607 USP1 986598 sc-eQTL 6.62e-01 -0.0359 0.0819 0.424 CD8_TCM L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 1.19e-01 -0.135 0.0863 0.424 CD8_TCM L2
ENSG00000079739 PGM1 -170516 sc-eQTL 1.29e-01 -0.135 0.0885 0.406 CD8_TEM L2
ENSG00000088035 ALG6 55320 sc-eQTL 5.93e-01 0.0479 0.0893 0.406 CD8_TEM L2
ENSG00000116641 DOCK7 734509 sc-eQTL 3.74e-01 -0.0771 0.0865 0.406 CD8_TEM L2
ENSG00000125703 ATG4C 638763 sc-eQTL 2.57e-02 0.185 0.0822 0.406 CD8_TEM L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 2.71e-02 -0.198 0.089 0.406 CD8_TEM L2
ENSG00000162607 USP1 986598 sc-eQTL 5.63e-01 0.0498 0.086 0.406 CD8_TEM L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 5.01e-02 -0.171 0.0866 0.406 CD8_TEM L2
ENSG00000079739 PGM1 -170516 sc-eQTL 5.00e-01 -0.0573 0.0848 0.42 MAIT L2
ENSG00000088035 ALG6 55320 sc-eQTL 5.44e-01 -0.0511 0.0839 0.42 MAIT L2
ENSG00000116641 DOCK7 734509 sc-eQTL 7.56e-01 0.0251 0.0805 0.42 MAIT L2
ENSG00000125703 ATG4C 638763 sc-eQTL 8.09e-02 0.148 0.0843 0.42 MAIT L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 6.67e-03 -0.229 0.0835 0.42 MAIT L2
ENSG00000162607 USP1 986598 sc-eQTL 2.33e-01 -0.101 0.0841 0.42 MAIT L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 9.01e-01 -0.0109 0.0875 0.42 MAIT L2
ENSG00000079739 PGM1 -170516 sc-eQTL 7.64e-01 0.0256 0.0852 0.42 NK_CD56bright L2
ENSG00000088035 ALG6 55320 sc-eQTL 1.09e-01 0.14 0.0868 0.42 NK_CD56bright L2
ENSG00000116641 DOCK7 734509 sc-eQTL 5.23e-01 0.0483 0.0756 0.42 NK_CD56bright L2
ENSG00000125703 ATG4C 638763 sc-eQTL 9.99e-01 -0.000108 0.0845 0.42 NK_CD56bright L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 5.72e-01 -0.0498 0.088 0.42 NK_CD56bright L2
ENSG00000162607 USP1 986598 sc-eQTL 7.94e-01 -0.0238 0.0908 0.42 NK_CD56bright L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 7.65e-02 -0.153 0.0862 0.42 NK_CD56bright L2
ENSG00000079739 PGM1 -170516 sc-eQTL 9.52e-01 0.00398 0.0661 0.42 NK_CD56dim L2
ENSG00000088035 ALG6 55320 sc-eQTL 4.68e-01 0.0609 0.0838 0.42 NK_CD56dim L2
ENSG00000116641 DOCK7 734509 sc-eQTL 8.05e-01 -0.018 0.073 0.42 NK_CD56dim L2
ENSG00000125703 ATG4C 638763 sc-eQTL 2.31e-02 -0.168 0.0733 0.42 NK_CD56dim L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 1.40e-01 -0.124 0.084 0.42 NK_CD56dim L2
ENSG00000162607 USP1 986598 sc-eQTL 6.62e-01 0.0358 0.0818 0.42 NK_CD56dim L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 4.99e-01 -0.0617 0.0911 0.42 NK_CD56dim L2
ENSG00000079739 PGM1 -170516 sc-eQTL 7.71e-01 -0.0267 0.0915 0.425 NK_HLA L2
ENSG00000088035 ALG6 55320 sc-eQTL 3.05e-01 0.0973 0.0946 0.425 NK_HLA L2
ENSG00000116641 DOCK7 734509 sc-eQTL 4.78e-01 -0.0516 0.0725 0.425 NK_HLA L2
ENSG00000125703 ATG4C 638763 sc-eQTL 7.57e-01 0.0261 0.0844 0.425 NK_HLA L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 7.32e-02 -0.158 0.0879 0.425 NK_HLA L2
ENSG00000162607 USP1 986598 sc-eQTL 5.73e-01 -0.0523 0.0926 0.425 NK_HLA L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 4.27e-01 0.067 0.0842 0.425 NK_HLA L2
ENSG00000079739 PGM1 -170516 sc-eQTL 4.87e-01 0.0507 0.0728 0.42 NK_cytokine L2
ENSG00000088035 ALG6 55320 sc-eQTL 6.33e-01 0.0394 0.0823 0.42 NK_cytokine L2
ENSG00000116641 DOCK7 734509 sc-eQTL 8.77e-01 0.0119 0.0763 0.42 NK_cytokine L2
ENSG00000125703 ATG4C 638763 sc-eQTL 1.12e-01 0.124 0.0776 0.42 NK_cytokine L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 2.05e-03 -0.247 0.079 0.42 NK_cytokine L2
ENSG00000162607 USP1 986598 sc-eQTL 2.61e-01 0.0956 0.0848 0.42 NK_cytokine L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 8.87e-01 -0.0122 0.0861 0.42 NK_cytokine L2
ENSG00000079739 PGM1 -170516 sc-eQTL 2.70e-01 -0.117 0.106 0.419 PB L2
ENSG00000088035 ALG6 55320 sc-eQTL 7.71e-01 0.0326 0.112 0.419 PB L2
ENSG00000116641 DOCK7 734509 sc-eQTL 7.45e-02 -0.212 0.118 0.419 PB L2
ENSG00000125703 ATG4C 638763 sc-eQTL 7.86e-01 0.0284 0.104 0.419 PB L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 5.94e-02 -0.195 0.102 0.419 PB L2
ENSG00000162607 USP1 986598 sc-eQTL 5.63e-01 0.06 0.103 0.419 PB L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 1.05e-01 -0.184 0.113 0.419 PB L2
ENSG00000079739 PGM1 -170516 sc-eQTL 3.21e-01 -0.0789 0.0793 0.42 Pro_T L2
ENSG00000088035 ALG6 55320 sc-eQTL 9.75e-01 0.00257 0.0808 0.42 Pro_T L2
ENSG00000116641 DOCK7 734509 sc-eQTL 2.67e-01 -0.09 0.0809 0.42 Pro_T L2
ENSG00000125703 ATG4C 638763 sc-eQTL 3.19e-01 -0.0708 0.0708 0.42 Pro_T L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 1.56e-01 0.101 0.0709 0.42 Pro_T L2
ENSG00000162607 USP1 986598 sc-eQTL 4.39e-01 -0.0379 0.0489 0.42 Pro_T L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 7.72e-01 0.024 0.0827 0.42 Pro_T L2
ENSG00000079739 PGM1 -170516 sc-eQTL 7.61e-01 -0.0254 0.0834 0.421 Treg L2
ENSG00000088035 ALG6 55320 sc-eQTL 1.14e-01 0.141 0.0887 0.421 Treg L2
ENSG00000116641 DOCK7 734509 sc-eQTL 7.40e-01 0.0272 0.0819 0.421 Treg L2
ENSG00000125703 ATG4C 638763 sc-eQTL 5.83e-01 0.046 0.0836 0.421 Treg L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 6.34e-01 0.0417 0.0875 0.421 Treg L2
ENSG00000162607 USP1 986598 sc-eQTL 4.11e-01 0.0697 0.0845 0.421 Treg L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 9.09e-01 -0.00961 0.0837 0.421 Treg L2
ENSG00000079739 PGM1 -170516 sc-eQTL 8.38e-01 0.017 0.0829 0.415 cDC L2
ENSG00000088035 ALG6 55320 sc-eQTL 5.97e-01 -0.0445 0.084 0.415 cDC L2
ENSG00000116641 DOCK7 734509 sc-eQTL 6.45e-01 0.0381 0.0825 0.415 cDC L2
ENSG00000125703 ATG4C 638763 sc-eQTL 7.28e-01 -0.0249 0.0716 0.415 cDC L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 4.40e-01 -0.0702 0.0907 0.415 cDC L2
ENSG00000162607 USP1 986598 sc-eQTL 7.21e-01 -0.029 0.0808 0.415 cDC L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 6.09e-01 -0.0374 0.0729 0.415 cDC L2
ENSG00000079739 PGM1 -170516 sc-eQTL 2.92e-01 0.0819 0.0776 0.421 cMono_IL1B L2
ENSG00000088035 ALG6 55320 sc-eQTL 6.49e-01 0.0354 0.0778 0.421 cMono_IL1B L2
ENSG00000116641 DOCK7 734509 sc-eQTL 7.64e-02 -0.145 0.0815 0.421 cMono_IL1B L2
ENSG00000125703 ATG4C 638763 sc-eQTL 9.43e-01 -0.00415 0.0577 0.421 cMono_IL1B L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 7.17e-05 -0.319 0.0788 0.421 cMono_IL1B L2
ENSG00000162607 USP1 986598 sc-eQTL 6.61e-01 0.0317 0.0721 0.421 cMono_IL1B L2
ENSG00000079739 PGM1 -170516 sc-eQTL 8.26e-01 0.019 0.0866 0.421 cMono_S100A L2
ENSG00000088035 ALG6 55320 sc-eQTL 8.95e-01 -0.0116 0.0878 0.421 cMono_S100A L2
ENSG00000116641 DOCK7 734509 sc-eQTL 7.25e-01 0.0287 0.0813 0.421 cMono_S100A L2
ENSG00000125703 ATG4C 638763 sc-eQTL 1.64e-01 0.0979 0.0701 0.421 cMono_S100A L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 4.76e-01 -0.0567 0.0794 0.421 cMono_S100A L2
ENSG00000162607 USP1 986598 sc-eQTL 8.08e-02 -0.142 0.0812 0.421 cMono_S100A L2
ENSG00000079739 PGM1 -170516 sc-eQTL 7.60e-01 0.0289 0.0942 0.43 gdT L2
ENSG00000088035 ALG6 55320 sc-eQTL 9.61e-01 -0.00493 0.1 0.43 gdT L2
ENSG00000116641 DOCK7 734509 sc-eQTL 1.50e-01 0.142 0.0978 0.43 gdT L2
ENSG00000125703 ATG4C 638763 sc-eQTL 2.97e-01 0.0981 0.0937 0.43 gdT L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 1.83e-01 -0.133 0.0993 0.43 gdT L2
ENSG00000162607 USP1 986598 sc-eQTL 7.68e-01 -0.0279 0.0945 0.43 gdT L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 8.18e-01 0.0226 0.0983 0.43 gdT L2
ENSG00000079739 PGM1 -170516 sc-eQTL 7.92e-02 0.154 0.0871 0.418 intMono L2
ENSG00000088035 ALG6 55320 sc-eQTL 6.20e-01 0.0405 0.0817 0.418 intMono L2
ENSG00000116641 DOCK7 734509 sc-eQTL 7.12e-01 0.0308 0.0834 0.418 intMono L2
ENSG00000125703 ATG4C 638763 sc-eQTL 3.12e-01 0.0806 0.0795 0.418 intMono L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 4.05e-03 -0.25 0.086 0.418 intMono L2
ENSG00000162607 USP1 986598 sc-eQTL 7.97e-01 0.023 0.0892 0.418 intMono L2
ENSG00000079739 PGM1 -170516 sc-eQTL 8.25e-01 0.0172 0.0777 0.419 ncMono L2
ENSG00000088035 ALG6 55320 sc-eQTL 2.90e-01 -0.0903 0.0852 0.419 ncMono L2
ENSG00000116641 DOCK7 734509 sc-eQTL 2.02e-01 -0.107 0.0837 0.419 ncMono L2
ENSG00000125703 ATG4C 638763 sc-eQTL 3.73e-01 -0.0699 0.0784 0.419 ncMono L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 2.42e-01 -0.0961 0.0819 0.419 ncMono L2
ENSG00000162607 USP1 986598 sc-eQTL 7.45e-01 0.0274 0.0839 0.419 ncMono L2
ENSG00000079739 PGM1 -170516 sc-eQTL 8.70e-01 -0.0154 0.0944 0.415 pDC L2
ENSG00000088035 ALG6 55320 sc-eQTL 2.95e-01 0.0962 0.0916 0.415 pDC L2
ENSG00000116641 DOCK7 734509 sc-eQTL 9.45e-02 -0.156 0.093 0.415 pDC L2
ENSG00000125703 ATG4C 638763 sc-eQTL 7.04e-01 0.0321 0.0842 0.415 pDC L2
ENSG00000142856 ITGB3BP -170826 sc-eQTL 6.47e-01 -0.0433 0.0945 0.415 pDC L2
ENSG00000162607 USP1 986598 sc-eQTL 2.03e-01 0.123 0.0958 0.415 pDC L2
ENSG00000203965 EFCAB7 -100477 sc-eQTL 6.63e-01 -0.0365 0.0836 0.415 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -170516 sc-eQTL 6.06e-01 0.0419 0.0811 0.421 B_Memory LOneK1K
ENSG00000088035 ALG6 55320 sc-eQTL 7.86e-01 -0.0244 0.0897 0.421 B_Memory LOneK1K
ENSG00000116641 DOCK7 734509 sc-eQTL 6.22e-01 -0.0385 0.0778 0.421 B_Memory LOneK1K
ENSG00000125703 ATG4C 638763 sc-eQTL 9.41e-02 0.105 0.0625 0.421 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -170826 sc-eQTL 2.10e-03 -0.252 0.0809 0.421 B_Memory LOneK1K
ENSG00000162607 USP1 986598 sc-eQTL 4.88e-01 -0.0557 0.0802 0.421 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -100477 sc-eQTL 1.54e-05 -0.365 0.0825 0.421 B_Memory LOneK1K
ENSG00000079739 PGM1 -170516 sc-eQTL 1.63e-01 0.117 0.0836 0.421 B_Naive LOneK1K
ENSG00000088035 ALG6 55320 sc-eQTL 7.26e-01 0.0304 0.0865 0.421 B_Naive LOneK1K
ENSG00000116641 DOCK7 734509 sc-eQTL 8.64e-01 -0.0138 0.0808 0.421 B_Naive LOneK1K
ENSG00000125703 ATG4C 638763 sc-eQTL 2.02e-01 -0.0786 0.0614 0.421 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -170826 sc-eQTL 2.34e-07 -0.437 0.0818 0.421 B_Naive LOneK1K
ENSG00000162607 USP1 986598 sc-eQTL 2.70e-01 0.0826 0.0747 0.421 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -100477 sc-eQTL 1.00e-01 -0.144 0.0871 0.421 B_Naive LOneK1K
ENSG00000079739 PGM1 -170516 sc-eQTL 5.61e-01 0.0463 0.0795 0.421 CD14_Mono LOneK1K
ENSG00000088035 ALG6 55320 sc-eQTL 7.73e-01 0.0223 0.077 0.421 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 734509 sc-eQTL 1.29e-01 -0.118 0.0772 0.421 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 638763 sc-eQTL 3.94e-01 0.0458 0.0535 0.421 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -170826 sc-eQTL 2.15e-03 -0.241 0.0776 0.421 CD14_Mono LOneK1K
ENSG00000162607 USP1 986598 sc-eQTL 3.93e-01 -0.0579 0.0677 0.421 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -170516 sc-eQTL 2.27e-01 0.0914 0.0755 0.42 CD16_Mono LOneK1K
ENSG00000088035 ALG6 55320 sc-eQTL 9.82e-01 -0.00196 0.086 0.42 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 734509 sc-eQTL 5.51e-01 -0.0508 0.085 0.42 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 638763 sc-eQTL 4.21e-01 -0.0584 0.0724 0.42 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -170826 sc-eQTL 6.30e-03 -0.228 0.0827 0.42 CD16_Mono LOneK1K
ENSG00000162607 USP1 986598 sc-eQTL 4.12e-01 0.0649 0.079 0.42 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -170516 sc-eQTL 8.69e-01 0.0107 0.0649 0.42 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 55320 sc-eQTL 1.94e-01 0.101 0.0776 0.42 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 734509 sc-eQTL 8.78e-01 0.0107 0.0698 0.42 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 638763 sc-eQTL 9.35e-01 -0.00571 0.0697 0.42 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -170826 sc-eQTL 6.35e-04 -0.278 0.0803 0.42 NK_CD56dim LOneK1K
ENSG00000162607 USP1 986598 sc-eQTL 3.20e-01 0.0746 0.0748 0.42 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -100477 sc-eQTL 5.99e-01 -0.048 0.0911 0.42 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -170516 eQTL 1.05e-13 0.131 0.0173 0.00368 0.00402 0.42
ENSG00000088035 ALG6 55320 eQTL 4.81e-06 0.0603 0.0131 0.0 0.0 0.42
ENSG00000116641 DOCK7 734527 eQTL 0.0132 -0.0547 0.022 0.0 0.0 0.42
ENSG00000116652 DLEU2L -124187 eQTL 0.000652 -0.0881 0.0258 0.00478 0.00459 0.42
ENSG00000185483 ROR1 -351122 pQTL 0.00923 0.0348 0.0133 0.00136 0.0 0.418
ENSG00000203965 EFCAB7 -100477 eQTL 1.58e-07 -0.125 0.0237 0.0112 0.0112 0.42
ENSG00000230798 FOXD3-AS1 98454 eQTL 0.0235 0.059 0.026 0.0 0.0 0.42

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -170516 2.68e-06 3.14e-06 3.09e-07 2.07e-06 4.59e-07 7.53e-07 1.92e-06 6.87e-07 1.91e-06 1.11e-06 2.61e-06 1.4e-06 3.64e-06 1.42e-06 8.59e-07 1.63e-06 1.22e-06 2.12e-06 1.05e-06 1.29e-06 1.21e-06 3.09e-06 2.38e-06 1.08e-06 3.74e-06 1.23e-06 1.39e-06 1.81e-06 1.96e-06 1.84e-06 1.82e-06 2.48e-07 5.85e-07 1.23e-06 1.35e-06 9.57e-07 8.12e-07 4.12e-07 9.3e-07 3.35e-07 2.74e-07 3.56e-06 6.27e-07 1.99e-07 3.3e-07 3.14e-07 5.32e-07 2.22e-07 2.41e-07
ENSG00000088035 ALG6 55320 9.17e-06 1.13e-05 1.28e-06 5.54e-06 2.36e-06 4.22e-06 1.07e-05 1.92e-06 9.51e-06 5.03e-06 1.24e-05 5.61e-06 1.51e-05 3.53e-06 2.62e-06 6.52e-06 4.36e-06 6.67e-06 2.6e-06 2.88e-06 5.18e-06 9.49e-06 7.76e-06 3.36e-06 1.39e-05 3.75e-06 4.87e-06 4.09e-06 9.27e-06 8.12e-06 5.51e-06 8.39e-07 1.26e-06 3.01e-06 4.59e-06 2.65e-06 1.71e-06 1.91e-06 1.6e-06 9.79e-07 8.85e-07 1.27e-05 1.38e-06 1.56e-07 7.51e-07 1.73e-06 1.28e-06 8.28e-07 5.22e-07