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Genes within 1Mb (chr1:63402938:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -190473 sc-eQTL 2.02e-01 0.0925 0.0723 0.421 B L1
ENSG00000088035 ALG6 35363 sc-eQTL 3.93e-01 0.0642 0.075 0.421 B L1
ENSG00000116641 DOCK7 714552 sc-eQTL 2.83e-01 -0.0806 0.075 0.421 B L1
ENSG00000125703 ATG4C 618806 sc-eQTL 4.79e-01 -0.037 0.0522 0.421 B L1
ENSG00000142856 ITGB3BP -190783 sc-eQTL 1.17e-07 -0.427 0.0778 0.421 B L1
ENSG00000162607 USP1 966641 sc-eQTL 6.75e-01 0.0302 0.0721 0.421 B L1
ENSG00000203965 EFCAB7 -120434 sc-eQTL 1.65e-04 -0.316 0.0823 0.421 B L1
ENSG00000079739 PGM1 -190473 sc-eQTL 2.91e-01 0.066 0.0623 0.421 CD4T L1
ENSG00000088035 ALG6 35363 sc-eQTL 3.13e-01 0.0696 0.0688 0.421 CD4T L1
ENSG00000116641 DOCK7 714552 sc-eQTL 6.89e-01 -0.028 0.0698 0.421 CD4T L1
ENSG00000125703 ATG4C 618806 sc-eQTL 7.61e-01 0.0171 0.0564 0.421 CD4T L1
ENSG00000142856 ITGB3BP -190783 sc-eQTL 1.80e-08 -0.435 0.0742 0.421 CD4T L1
ENSG00000162607 USP1 966641 sc-eQTL 2.30e-01 -0.0656 0.0545 0.421 CD4T L1
ENSG00000203965 EFCAB7 -120434 sc-eQTL 2.71e-03 -0.213 0.0703 0.421 CD4T L1
ENSG00000079739 PGM1 -190473 sc-eQTL 7.69e-01 0.0204 0.0692 0.421 CD8T L1
ENSG00000088035 ALG6 35363 sc-eQTL 7.19e-01 -0.0275 0.0763 0.421 CD8T L1
ENSG00000116641 DOCK7 714552 sc-eQTL 5.05e-01 -0.0515 0.0772 0.421 CD8T L1
ENSG00000125703 ATG4C 618806 sc-eQTL 7.36e-01 0.0248 0.0734 0.421 CD8T L1
ENSG00000142856 ITGB3BP -190783 sc-eQTL 9.05e-10 -0.482 0.0751 0.421 CD8T L1
ENSG00000162607 USP1 966641 sc-eQTL 9.18e-01 0.00658 0.064 0.421 CD8T L1
ENSG00000203965 EFCAB7 -120434 sc-eQTL 7.45e-05 -0.319 0.0789 0.421 CD8T L1
ENSG00000079739 PGM1 -190473 sc-eQTL 2.39e-01 0.0898 0.0761 0.421 DC L1
ENSG00000088035 ALG6 35363 sc-eQTL 1.75e-01 0.107 0.0785 0.421 DC L1
ENSG00000116641 DOCK7 714552 sc-eQTL 9.33e-01 0.00678 0.0808 0.421 DC L1
ENSG00000125703 ATG4C 618806 sc-eQTL 8.12e-01 -0.015 0.0632 0.421 DC L1
ENSG00000142856 ITGB3BP -190783 sc-eQTL 4.57e-01 -0.0658 0.0882 0.421 DC L1
ENSG00000162607 USP1 966641 sc-eQTL 1.79e-01 0.104 0.0768 0.421 DC L1
ENSG00000203965 EFCAB7 -120434 sc-eQTL 1.48e-01 -0.111 0.0765 0.421 DC L1
ENSG00000079739 PGM1 -190473 sc-eQTL 4.49e-01 0.0567 0.0748 0.421 Mono L1
ENSG00000088035 ALG6 35363 sc-eQTL 4.56e-01 0.0582 0.078 0.421 Mono L1
ENSG00000116641 DOCK7 714552 sc-eQTL 1.51e-01 -0.108 0.0752 0.421 Mono L1
ENSG00000125703 ATG4C 618806 sc-eQTL 4.99e-01 0.0346 0.051 0.421 Mono L1
ENSG00000142856 ITGB3BP -190783 sc-eQTL 5.97e-04 -0.274 0.0785 0.421 Mono L1
ENSG00000162607 USP1 966641 sc-eQTL 8.29e-01 -0.0143 0.0663 0.421 Mono L1
ENSG00000079739 PGM1 -190473 sc-eQTL 5.99e-01 0.0336 0.0637 0.421 NK L1
ENSG00000088035 ALG6 35363 sc-eQTL 9.46e-02 0.125 0.0743 0.421 NK L1
ENSG00000116641 DOCK7 714552 sc-eQTL 5.20e-01 0.0397 0.0615 0.421 NK L1
ENSG00000125703 ATG4C 618806 sc-eQTL 9.01e-01 -0.00824 0.0661 0.421 NK L1
ENSG00000142856 ITGB3BP -190783 sc-eQTL 4.78e-04 -0.283 0.0799 0.421 NK L1
ENSG00000162607 USP1 966641 sc-eQTL 7.80e-01 0.0206 0.0735 0.421 NK L1
ENSG00000203965 EFCAB7 -120434 sc-eQTL 2.72e-01 -0.0981 0.089 0.421 NK L1
ENSG00000079739 PGM1 -190473 sc-eQTL 3.78e-01 -0.0643 0.0728 0.421 Other_T L1
ENSG00000088035 ALG6 35363 sc-eQTL 9.91e-01 -0.000799 0.0733 0.421 Other_T L1
ENSG00000116641 DOCK7 714552 sc-eQTL 7.84e-01 0.0205 0.0748 0.421 Other_T L1
ENSG00000125703 ATG4C 618806 sc-eQTL 1.33e-02 0.159 0.0639 0.421 Other_T L1
ENSG00000142856 ITGB3BP -190783 sc-eQTL 3.19e-02 -0.123 0.0568 0.421 Other_T L1
ENSG00000162607 USP1 966641 sc-eQTL 5.14e-01 -0.0325 0.0497 0.421 Other_T L1
ENSG00000203965 EFCAB7 -120434 sc-eQTL 3.15e-01 -0.0891 0.0884 0.421 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -190473 sc-eQTL 3.03e-01 0.101 0.0978 0.421 B_Activated L2
ENSG00000088035 ALG6 35363 sc-eQTL 1.92e-01 0.122 0.0935 0.421 B_Activated L2
ENSG00000116641 DOCK7 714552 sc-eQTL 2.75e-01 0.0955 0.0872 0.421 B_Activated L2
ENSG00000125703 ATG4C 618806 sc-eQTL 7.24e-01 0.0326 0.092 0.421 B_Activated L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 7.16e-02 -0.161 0.0891 0.421 B_Activated L2
ENSG00000162607 USP1 966641 sc-eQTL 6.49e-01 -0.0444 0.0974 0.421 B_Activated L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 5.58e-01 -0.0498 0.085 0.421 B_Activated L2
ENSG00000079739 PGM1 -190473 sc-eQTL 2.57e-01 0.0968 0.0852 0.421 B_Intermediate L2
ENSG00000088035 ALG6 35363 sc-eQTL 3.98e-01 -0.0733 0.0866 0.421 B_Intermediate L2
ENSG00000116641 DOCK7 714552 sc-eQTL 7.00e-01 0.032 0.0828 0.421 B_Intermediate L2
ENSG00000125703 ATG4C 618806 sc-eQTL 4.50e-02 0.14 0.0695 0.421 B_Intermediate L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 7.90e-03 -0.22 0.0822 0.421 B_Intermediate L2
ENSG00000162607 USP1 966641 sc-eQTL 7.12e-01 -0.0309 0.0834 0.421 B_Intermediate L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 1.92e-03 -0.254 0.0809 0.421 B_Intermediate L2
ENSG00000079739 PGM1 -190473 sc-eQTL 6.33e-01 -0.0403 0.0843 0.42 B_Memory L2
ENSG00000088035 ALG6 35363 sc-eQTL 6.54e-01 0.0385 0.0857 0.42 B_Memory L2
ENSG00000116641 DOCK7 714552 sc-eQTL 1.35e-01 -0.12 0.08 0.42 B_Memory L2
ENSG00000125703 ATG4C 618806 sc-eQTL 8.67e-01 -0.0128 0.0764 0.42 B_Memory L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 6.95e-02 -0.158 0.0868 0.42 B_Memory L2
ENSG00000162607 USP1 966641 sc-eQTL 1.44e-01 -0.129 0.0878 0.42 B_Memory L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 6.13e-02 -0.162 0.0861 0.42 B_Memory L2
ENSG00000079739 PGM1 -190473 sc-eQTL 1.69e-01 0.118 0.0855 0.421 B_Naive1 L2
ENSG00000088035 ALG6 35363 sc-eQTL 8.28e-01 0.0188 0.0863 0.421 B_Naive1 L2
ENSG00000116641 DOCK7 714552 sc-eQTL 9.85e-01 -0.00154 0.0827 0.421 B_Naive1 L2
ENSG00000125703 ATG4C 618806 sc-eQTL 7.80e-01 -0.0178 0.0637 0.421 B_Naive1 L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 7.83e-06 -0.369 0.0805 0.421 B_Naive1 L2
ENSG00000162607 USP1 966641 sc-eQTL 5.56e-01 0.0437 0.0742 0.421 B_Naive1 L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 2.29e-03 -0.272 0.0881 0.421 B_Naive1 L2
ENSG00000079739 PGM1 -190473 sc-eQTL 5.05e-01 0.0568 0.0849 0.421 B_Naive2 L2
ENSG00000088035 ALG6 35363 sc-eQTL 3.94e-01 0.0756 0.0885 0.421 B_Naive2 L2
ENSG00000116641 DOCK7 714552 sc-eQTL 9.98e-01 0.000245 0.0852 0.421 B_Naive2 L2
ENSG00000125703 ATG4C 618806 sc-eQTL 3.27e-01 -0.0804 0.0819 0.421 B_Naive2 L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 5.18e-06 -0.396 0.0847 0.421 B_Naive2 L2
ENSG00000162607 USP1 966641 sc-eQTL 5.30e-01 0.0533 0.0846 0.421 B_Naive2 L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 1.39e-01 0.131 0.0881 0.421 B_Naive2 L2
ENSG00000079739 PGM1 -190473 sc-eQTL 8.36e-01 -0.0178 0.0856 0.418 CD4_CTL L2
ENSG00000088035 ALG6 35363 sc-eQTL 7.41e-01 -0.03 0.0905 0.418 CD4_CTL L2
ENSG00000116641 DOCK7 714552 sc-eQTL 3.18e-01 0.0791 0.079 0.418 CD4_CTL L2
ENSG00000125703 ATG4C 618806 sc-eQTL 8.04e-01 0.0203 0.0819 0.418 CD4_CTL L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 5.66e-01 -0.0503 0.0875 0.418 CD4_CTL L2
ENSG00000162607 USP1 966641 sc-eQTL 8.27e-01 -0.0183 0.0834 0.418 CD4_CTL L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 8.19e-01 0.0191 0.0832 0.418 CD4_CTL L2
ENSG00000079739 PGM1 -190473 sc-eQTL 2.26e-01 0.0847 0.0697 0.421 CD4_Naive L2
ENSG00000088035 ALG6 35363 sc-eQTL 4.07e-01 0.0631 0.0759 0.421 CD4_Naive L2
ENSG00000116641 DOCK7 714552 sc-eQTL 9.41e-01 -0.00551 0.0747 0.421 CD4_Naive L2
ENSG00000125703 ATG4C 618806 sc-eQTL 7.38e-01 0.0221 0.066 0.421 CD4_Naive L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 1.04e-07 -0.415 0.0754 0.421 CD4_Naive L2
ENSG00000162607 USP1 966641 sc-eQTL 3.53e-01 -0.0573 0.0615 0.421 CD4_Naive L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 3.29e-02 -0.17 0.0792 0.421 CD4_Naive L2
ENSG00000079739 PGM1 -190473 sc-eQTL 9.55e-01 -0.00412 0.073 0.421 CD4_TCM L2
ENSG00000088035 ALG6 35363 sc-eQTL 8.93e-01 0.0114 0.0848 0.421 CD4_TCM L2
ENSG00000116641 DOCK7 714552 sc-eQTL 1.48e-01 -0.109 0.0748 0.421 CD4_TCM L2
ENSG00000125703 ATG4C 618806 sc-eQTL 2.52e-01 -0.0838 0.0729 0.421 CD4_TCM L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 7.57e-05 -0.336 0.0831 0.421 CD4_TCM L2
ENSG00000162607 USP1 966641 sc-eQTL 2.34e-01 -0.084 0.0705 0.421 CD4_TCM L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 1.37e-03 -0.264 0.0815 0.421 CD4_TCM L2
ENSG00000079739 PGM1 -190473 sc-eQTL 6.41e-03 0.232 0.0842 0.421 CD4_TEM L2
ENSG00000088035 ALG6 35363 sc-eQTL 6.19e-01 0.0429 0.0861 0.421 CD4_TEM L2
ENSG00000116641 DOCK7 714552 sc-eQTL 8.91e-01 0.0115 0.0839 0.421 CD4_TEM L2
ENSG00000125703 ATG4C 618806 sc-eQTL 3.75e-01 0.0723 0.0814 0.421 CD4_TEM L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 7.15e-03 -0.225 0.0827 0.421 CD4_TEM L2
ENSG00000162607 USP1 966641 sc-eQTL 5.52e-03 -0.22 0.0783 0.421 CD4_TEM L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 1.80e-01 -0.117 0.0868 0.421 CD4_TEM L2
ENSG00000079739 PGM1 -190473 sc-eQTL 5.86e-01 0.0426 0.0782 0.421 CD8_CTL L2
ENSG00000088035 ALG6 35363 sc-eQTL 3.74e-01 -0.0739 0.0831 0.421 CD8_CTL L2
ENSG00000116641 DOCK7 714552 sc-eQTL 4.10e-01 -0.0652 0.0788 0.421 CD8_CTL L2
ENSG00000125703 ATG4C 618806 sc-eQTL 7.91e-02 0.147 0.0834 0.421 CD8_CTL L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 1.57e-02 -0.21 0.0862 0.421 CD8_CTL L2
ENSG00000162607 USP1 966641 sc-eQTL 4.37e-01 0.0609 0.0782 0.421 CD8_CTL L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 2.06e-01 -0.113 0.0892 0.421 CD8_CTL L2
ENSG00000079739 PGM1 -190473 sc-eQTL 1.67e-01 0.11 0.0792 0.421 CD8_Naive L2
ENSG00000088035 ALG6 35363 sc-eQTL 7.62e-01 0.025 0.0824 0.421 CD8_Naive L2
ENSG00000116641 DOCK7 714552 sc-eQTL 8.83e-01 -0.0125 0.0852 0.421 CD8_Naive L2
ENSG00000125703 ATG4C 618806 sc-eQTL 5.80e-01 -0.0453 0.0817 0.421 CD8_Naive L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 6.93e-08 -0.432 0.0773 0.421 CD8_Naive L2
ENSG00000162607 USP1 966641 sc-eQTL 1.27e-01 -0.107 0.0696 0.421 CD8_Naive L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 3.51e-02 -0.164 0.0772 0.421 CD8_Naive L2
ENSG00000079739 PGM1 -190473 sc-eQTL 8.78e-01 -0.0132 0.0863 0.424 CD8_TCM L2
ENSG00000088035 ALG6 35363 sc-eQTL 6.21e-01 -0.0433 0.0873 0.424 CD8_TCM L2
ENSG00000116641 DOCK7 714552 sc-eQTL 5.66e-01 -0.049 0.0852 0.424 CD8_TCM L2
ENSG00000125703 ATG4C 618806 sc-eQTL 5.38e-01 -0.0537 0.0871 0.424 CD8_TCM L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 8.62e-02 -0.145 0.0841 0.424 CD8_TCM L2
ENSG00000162607 USP1 966641 sc-eQTL 6.30e-01 -0.0394 0.0815 0.424 CD8_TCM L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 9.43e-02 -0.144 0.0857 0.424 CD8_TCM L2
ENSG00000079739 PGM1 -190473 sc-eQTL 1.18e-01 -0.139 0.0884 0.406 CD8_TEM L2
ENSG00000088035 ALG6 35363 sc-eQTL 6.53e-01 0.0402 0.0893 0.406 CD8_TEM L2
ENSG00000116641 DOCK7 714552 sc-eQTL 3.10e-01 -0.0879 0.0864 0.406 CD8_TEM L2
ENSG00000125703 ATG4C 618806 sc-eQTL 3.56e-02 0.174 0.0823 0.406 CD8_TEM L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 2.33e-02 -0.203 0.0889 0.406 CD8_TEM L2
ENSG00000162607 USP1 966641 sc-eQTL 5.71e-01 0.0488 0.0859 0.406 CD8_TEM L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 6.09e-02 -0.163 0.0866 0.406 CD8_TEM L2
ENSG00000079739 PGM1 -190473 sc-eQTL 6.53e-01 -0.0382 0.085 0.42 MAIT L2
ENSG00000088035 ALG6 35363 sc-eQTL 4.89e-01 -0.0583 0.0841 0.42 MAIT L2
ENSG00000116641 DOCK7 714552 sc-eQTL 8.13e-01 0.0191 0.0806 0.42 MAIT L2
ENSG00000125703 ATG4C 618806 sc-eQTL 5.11e-02 0.165 0.0842 0.42 MAIT L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 1.31e-02 -0.21 0.0839 0.42 MAIT L2
ENSG00000162607 USP1 966641 sc-eQTL 3.60e-01 -0.0774 0.0843 0.42 MAIT L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 9.25e-01 -0.0083 0.0877 0.42 MAIT L2
ENSG00000079739 PGM1 -190473 sc-eQTL 8.86e-01 0.0121 0.0845 0.42 NK_CD56bright L2
ENSG00000088035 ALG6 35363 sc-eQTL 9.12e-02 0.146 0.086 0.42 NK_CD56bright L2
ENSG00000116641 DOCK7 714552 sc-eQTL 5.60e-01 0.0437 0.075 0.42 NK_CD56bright L2
ENSG00000125703 ATG4C 618806 sc-eQTL 9.57e-01 0.00448 0.0838 0.42 NK_CD56bright L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 6.23e-01 -0.043 0.0872 0.42 NK_CD56bright L2
ENSG00000162607 USP1 966641 sc-eQTL 6.77e-01 -0.0376 0.09 0.42 NK_CD56bright L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 6.67e-02 -0.157 0.0854 0.42 NK_CD56bright L2
ENSG00000079739 PGM1 -190473 sc-eQTL 7.64e-01 0.0199 0.0661 0.42 NK_CD56dim L2
ENSG00000088035 ALG6 35363 sc-eQTL 5.84e-01 0.046 0.0838 0.42 NK_CD56dim L2
ENSG00000116641 DOCK7 714552 sc-eQTL 8.25e-01 -0.0162 0.0729 0.42 NK_CD56dim L2
ENSG00000125703 ATG4C 618806 sc-eQTL 3.38e-02 -0.157 0.0733 0.42 NK_CD56dim L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 1.35e-01 -0.126 0.0839 0.42 NK_CD56dim L2
ENSG00000162607 USP1 966641 sc-eQTL 7.84e-01 0.0224 0.0818 0.42 NK_CD56dim L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 5.70e-01 -0.0518 0.091 0.42 NK_CD56dim L2
ENSG00000079739 PGM1 -190473 sc-eQTL 9.37e-01 -0.0072 0.0911 0.425 NK_HLA L2
ENSG00000088035 ALG6 35363 sc-eQTL 3.33e-01 0.0915 0.0942 0.425 NK_HLA L2
ENSG00000116641 DOCK7 714552 sc-eQTL 6.55e-01 -0.0323 0.0722 0.425 NK_HLA L2
ENSG00000125703 ATG4C 618806 sc-eQTL 8.53e-01 0.0156 0.084 0.425 NK_HLA L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 7.23e-02 -0.158 0.0874 0.425 NK_HLA L2
ENSG00000162607 USP1 966641 sc-eQTL 6.32e-01 -0.0443 0.0922 0.425 NK_HLA L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 4.24e-01 0.0672 0.0838 0.425 NK_HLA L2
ENSG00000079739 PGM1 -190473 sc-eQTL 4.03e-01 0.0609 0.0726 0.42 NK_cytokine L2
ENSG00000088035 ALG6 35363 sc-eQTL 8.16e-01 0.0191 0.0821 0.42 NK_cytokine L2
ENSG00000116641 DOCK7 714552 sc-eQTL 7.46e-01 0.0247 0.0761 0.42 NK_cytokine L2
ENSG00000125703 ATG4C 618806 sc-eQTL 1.27e-01 0.119 0.0774 0.42 NK_cytokine L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 1.80e-03 -0.249 0.0788 0.42 NK_cytokine L2
ENSG00000162607 USP1 966641 sc-eQTL 2.19e-01 0.104 0.0845 0.42 NK_cytokine L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 9.87e-01 -0.00145 0.0859 0.42 NK_cytokine L2
ENSG00000079739 PGM1 -190473 sc-eQTL 2.66e-01 -0.12 0.107 0.415 PB L2
ENSG00000088035 ALG6 35363 sc-eQTL 7.65e-01 0.0338 0.113 0.415 PB L2
ENSG00000116641 DOCK7 714552 sc-eQTL 8.73e-02 -0.206 0.119 0.415 PB L2
ENSG00000125703 ATG4C 618806 sc-eQTL 7.25e-01 0.0371 0.105 0.415 PB L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 7.09e-02 -0.189 0.104 0.415 PB L2
ENSG00000162607 USP1 966641 sc-eQTL 5.64e-01 0.0604 0.104 0.415 PB L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 1.12e-01 -0.183 0.114 0.415 PB L2
ENSG00000079739 PGM1 -190473 sc-eQTL 3.69e-01 -0.0714 0.0793 0.42 Pro_T L2
ENSG00000088035 ALG6 35363 sc-eQTL 9.62e-01 0.00388 0.0808 0.42 Pro_T L2
ENSG00000116641 DOCK7 714552 sc-eQTL 2.16e-01 -0.1 0.0808 0.42 Pro_T L2
ENSG00000125703 ATG4C 618806 sc-eQTL 3.14e-01 -0.0716 0.0708 0.42 Pro_T L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 1.69e-01 0.0979 0.0709 0.42 Pro_T L2
ENSG00000162607 USP1 966641 sc-eQTL 4.62e-01 -0.036 0.0489 0.42 Pro_T L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 7.04e-01 0.0315 0.0827 0.42 Pro_T L2
ENSG00000079739 PGM1 -190473 sc-eQTL 7.21e-01 -0.0298 0.0833 0.421 Treg L2
ENSG00000088035 ALG6 35363 sc-eQTL 1.87e-01 0.117 0.0887 0.421 Treg L2
ENSG00000116641 DOCK7 714552 sc-eQTL 6.47e-01 0.0375 0.0817 0.421 Treg L2
ENSG00000125703 ATG4C 618806 sc-eQTL 5.73e-01 0.0472 0.0835 0.421 Treg L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 5.36e-01 0.0542 0.0874 0.421 Treg L2
ENSG00000162607 USP1 966641 sc-eQTL 5.25e-01 0.0539 0.0845 0.421 Treg L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 6.80e-01 -0.0345 0.0836 0.421 Treg L2
ENSG00000079739 PGM1 -190473 sc-eQTL 7.36e-01 0.0278 0.0823 0.417 cDC L2
ENSG00000088035 ALG6 35363 sc-eQTL 6.18e-01 -0.0416 0.0834 0.417 cDC L2
ENSG00000116641 DOCK7 714552 sc-eQTL 6.21e-01 0.0406 0.0818 0.417 cDC L2
ENSG00000125703 ATG4C 618806 sc-eQTL 7.62e-01 -0.0215 0.0711 0.417 cDC L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 4.34e-01 -0.0706 0.09 0.417 cDC L2
ENSG00000162607 USP1 966641 sc-eQTL 7.27e-01 -0.028 0.0802 0.417 cDC L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 5.88e-01 -0.0392 0.0724 0.417 cDC L2
ENSG00000079739 PGM1 -190473 sc-eQTL 2.38e-01 0.0916 0.0774 0.421 cMono_IL1B L2
ENSG00000088035 ALG6 35363 sc-eQTL 5.89e-01 0.042 0.0777 0.421 cMono_IL1B L2
ENSG00000116641 DOCK7 714552 sc-eQTL 7.47e-02 -0.146 0.0813 0.421 cMono_IL1B L2
ENSG00000125703 ATG4C 618806 sc-eQTL 9.89e-01 -0.000778 0.0576 0.421 cMono_IL1B L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 5.64e-05 -0.323 0.0785 0.421 cMono_IL1B L2
ENSG00000162607 USP1 966641 sc-eQTL 6.98e-01 0.028 0.072 0.421 cMono_IL1B L2
ENSG00000079739 PGM1 -190473 sc-eQTL 7.74e-01 0.0249 0.0865 0.421 cMono_S100A L2
ENSG00000088035 ALG6 35363 sc-eQTL 9.10e-01 -0.00993 0.0877 0.421 cMono_S100A L2
ENSG00000116641 DOCK7 714552 sc-eQTL 6.23e-01 0.04 0.0813 0.421 cMono_S100A L2
ENSG00000125703 ATG4C 618806 sc-eQTL 1.33e-01 0.106 0.07 0.421 cMono_S100A L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 4.83e-01 -0.0558 0.0794 0.421 cMono_S100A L2
ENSG00000162607 USP1 966641 sc-eQTL 4.71e-02 -0.162 0.081 0.421 cMono_S100A L2
ENSG00000079739 PGM1 -190473 sc-eQTL 7.37e-01 0.0314 0.0936 0.433 gdT L2
ENSG00000088035 ALG6 35363 sc-eQTL 9.33e-01 0.00847 0.0998 0.433 gdT L2
ENSG00000116641 DOCK7 714552 sc-eQTL 1.42e-01 0.144 0.0972 0.433 gdT L2
ENSG00000125703 ATG4C 618806 sc-eQTL 3.55e-01 0.0866 0.0933 0.433 gdT L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 1.91e-01 -0.13 0.0988 0.433 gdT L2
ENSG00000162607 USP1 966641 sc-eQTL 7.15e-01 -0.0344 0.094 0.433 gdT L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 8.78e-01 0.015 0.0978 0.433 gdT L2
ENSG00000079739 PGM1 -190473 sc-eQTL 6.37e-02 0.162 0.0868 0.418 intMono L2
ENSG00000088035 ALG6 35363 sc-eQTL 5.57e-01 0.0479 0.0815 0.418 intMono L2
ENSG00000116641 DOCK7 714552 sc-eQTL 7.98e-01 0.0213 0.0833 0.418 intMono L2
ENSG00000125703 ATG4C 618806 sc-eQTL 3.79e-01 0.0699 0.0794 0.418 intMono L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 4.74e-03 -0.245 0.0859 0.418 intMono L2
ENSG00000162607 USP1 966641 sc-eQTL 7.88e-01 0.024 0.0891 0.418 intMono L2
ENSG00000079739 PGM1 -190473 sc-eQTL 7.90e-01 0.0206 0.0773 0.421 ncMono L2
ENSG00000088035 ALG6 35363 sc-eQTL 3.05e-01 -0.087 0.0847 0.421 ncMono L2
ENSG00000116641 DOCK7 714552 sc-eQTL 1.73e-01 -0.114 0.0832 0.421 ncMono L2
ENSG00000125703 ATG4C 618806 sc-eQTL 3.50e-01 -0.0729 0.0779 0.421 ncMono L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 2.00e-01 -0.105 0.0813 0.421 ncMono L2
ENSG00000162607 USP1 966641 sc-eQTL 7.44e-01 0.0273 0.0834 0.421 ncMono L2
ENSG00000079739 PGM1 -190473 sc-eQTL 8.55e-01 -0.0171 0.0936 0.418 pDC L2
ENSG00000088035 ALG6 35363 sc-eQTL 2.72e-01 0.1 0.0908 0.418 pDC L2
ENSG00000116641 DOCK7 714552 sc-eQTL 9.53e-02 -0.155 0.0923 0.418 pDC L2
ENSG00000125703 ATG4C 618806 sc-eQTL 7.19e-01 0.03 0.0835 0.418 pDC L2
ENSG00000142856 ITGB3BP -190783 sc-eQTL 5.87e-01 -0.051 0.0937 0.418 pDC L2
ENSG00000162607 USP1 966641 sc-eQTL 2.40e-01 0.112 0.0951 0.418 pDC L2
ENSG00000203965 EFCAB7 -120434 sc-eQTL 6.09e-01 -0.0424 0.0829 0.418 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -190473 sc-eQTL 6.02e-01 0.042 0.0803 0.421 B_Memory LOneK1K
ENSG00000088035 ALG6 35363 sc-eQTL 7.35e-01 -0.0301 0.0889 0.421 B_Memory LOneK1K
ENSG00000116641 DOCK7 714552 sc-eQTL 5.83e-01 -0.0424 0.0771 0.421 B_Memory LOneK1K
ENSG00000125703 ATG4C 618806 sc-eQTL 1.05e-01 0.101 0.062 0.421 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -190783 sc-eQTL 2.79e-03 -0.243 0.0802 0.421 B_Memory LOneK1K
ENSG00000162607 USP1 966641 sc-eQTL 5.01e-01 -0.0536 0.0795 0.421 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -120434 sc-eQTL 3.65e-05 -0.346 0.082 0.421 B_Memory LOneK1K
ENSG00000079739 PGM1 -190473 sc-eQTL 1.37e-01 0.125 0.0835 0.421 B_Naive LOneK1K
ENSG00000088035 ALG6 35363 sc-eQTL 5.18e-01 0.0559 0.0864 0.421 B_Naive LOneK1K
ENSG00000116641 DOCK7 714552 sc-eQTL 7.64e-01 -0.0242 0.0807 0.421 B_Naive LOneK1K
ENSG00000125703 ATG4C 618806 sc-eQTL 2.40e-01 -0.0723 0.0614 0.421 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -190783 sc-eQTL 1.41e-07 -0.444 0.0815 0.421 B_Naive LOneK1K
ENSG00000162607 USP1 966641 sc-eQTL 2.38e-01 0.0883 0.0746 0.421 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -120434 sc-eQTL 9.22e-02 -0.147 0.087 0.421 B_Naive LOneK1K
ENSG00000079739 PGM1 -190473 sc-eQTL 4.72e-01 0.0572 0.0794 0.421 CD14_Mono LOneK1K
ENSG00000088035 ALG6 35363 sc-eQTL 7.42e-01 0.0254 0.0769 0.421 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 714552 sc-eQTL 1.40e-01 -0.114 0.0771 0.421 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 618806 sc-eQTL 3.44e-01 0.0507 0.0535 0.421 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -190783 sc-eQTL 1.83e-03 -0.245 0.0775 0.421 CD14_Mono LOneK1K
ENSG00000162607 USP1 966641 sc-eQTL 2.81e-01 -0.0729 0.0675 0.421 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -190473 sc-eQTL 1.41e-01 0.111 0.0751 0.42 CD16_Mono LOneK1K
ENSG00000088035 ALG6 35363 sc-eQTL 8.63e-01 0.0148 0.0858 0.42 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 714552 sc-eQTL 4.31e-01 -0.0669 0.0847 0.42 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 618806 sc-eQTL 3.54e-01 -0.067 0.0722 0.42 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -190783 sc-eQTL 4.97e-03 -0.234 0.0824 0.42 CD16_Mono LOneK1K
ENSG00000162607 USP1 966641 sc-eQTL 4.39e-01 0.0611 0.0788 0.42 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -190473 sc-eQTL 6.74e-01 0.0273 0.0647 0.42 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 35363 sc-eQTL 2.93e-01 0.0817 0.0775 0.42 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 714552 sc-eQTL 7.30e-01 0.024 0.0696 0.42 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 618806 sc-eQTL 9.58e-01 -0.00362 0.0695 0.42 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -190783 sc-eQTL 6.57e-04 -0.277 0.0801 0.42 NK_CD56dim LOneK1K
ENSG00000162607 USP1 966641 sc-eQTL 3.86e-01 0.0649 0.0747 0.42 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -120434 sc-eQTL 6.87e-01 -0.0367 0.091 0.42 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -190473 eQTL 1.42e-13 0.13 0.0174 0.00301 0.00301 0.419
ENSG00000088035 ALG6 35363 eQTL 7.81e-06 0.059 0.0131 0.0 0.0 0.419
ENSG00000116641 DOCK7 714570 eQTL 0.0117 -0.0558 0.0221 0.0 0.0 0.419
ENSG00000116652 DLEU2L -144144 eQTL 0.000591 -0.0889 0.0258 0.00513 0.005 0.419
ENSG00000185483 ROR1 -371079 pQTL 0.00752 0.0357 0.0133 0.00144 0.0 0.416
ENSG00000203965 EFCAB7 -120434 eQTL 1.01e-07 -0.127 0.0237 0.0181 0.0171 0.419
ENSG00000230798 FOXD3-AS1 78497 eQTL 0.0304 0.0564 0.026 0.0 0.0 0.419

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -190473 4.36e-06 4.74e-06 6.91e-07 2.65e-06 1.63e-06 1.27e-06 4.13e-06 1.09e-06 4.93e-06 2.44e-06 4.96e-06 3.46e-06 7.5e-06 2.43e-06 1.33e-06 3.69e-06 2.09e-06 3.36e-06 1.5e-06 1.15e-06 3.04e-06 4.72e-06 3.67e-06 1.39e-06 5.89e-06 1.96e-06 2.35e-06 1.64e-06 4.48e-06 3.97e-06 2.68e-06 3.85e-07 5.38e-07 1.58e-06 2.16e-06 1.15e-06 1.1e-06 4.24e-07 9.23e-07 5.91e-07 7.78e-07 5.47e-06 4.34e-07 1.55e-07 6.67e-07 1.02e-06 9.5e-07 4.11e-07 5.92e-07
ENSG00000088035 ALG6 35363 1.43e-05 1.86e-05 3.89e-06 1.15e-05 3.8e-06 8.52e-06 2.56e-05 3.72e-06 1.8e-05 9.53e-06 2.31e-05 8.71e-06 3.45e-05 7.61e-06 5.23e-06 1.14e-05 9.14e-06 1.58e-05 6.32e-06 5.52e-06 9.81e-06 1.91e-05 1.84e-05 7.06e-06 3.01e-05 5.97e-06 8.84e-06 8.92e-06 2.14e-05 1.95e-05 1.23e-05 1.65e-06 2.39e-06 6.01e-06 7.8e-06 4.81e-06 3.13e-06 2.97e-06 4e-06 3.11e-06 1.71e-06 2.33e-05 2.69e-06 4.29e-07 2.07e-06 3e-06 3.43e-06 1.52e-06 1.52e-06