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Genes within 1Mb (chr1:63399384:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -194027 sc-eQTL 2.09e-01 0.0916 0.0727 0.417 B L1
ENSG00000088035 ALG6 31809 sc-eQTL 4.39e-01 0.0586 0.0755 0.417 B L1
ENSG00000116641 DOCK7 710998 sc-eQTL 2.79e-01 -0.0819 0.0754 0.417 B L1
ENSG00000125703 ATG4C 615252 sc-eQTL 5.96e-01 -0.0279 0.0526 0.417 B L1
ENSG00000142856 ITGB3BP -194337 sc-eQTL 1.46e-07 -0.426 0.0784 0.417 B L1
ENSG00000162607 USP1 963087 sc-eQTL 7.38e-01 0.0244 0.0726 0.417 B L1
ENSG00000203965 EFCAB7 -123988 sc-eQTL 8.23e-05 -0.332 0.0826 0.417 B L1
ENSG00000079739 PGM1 -194027 sc-eQTL 4.17e-01 0.051 0.0627 0.417 CD4T L1
ENSG00000088035 ALG6 31809 sc-eQTL 2.33e-01 0.0827 0.0691 0.417 CD4T L1
ENSG00000116641 DOCK7 710998 sc-eQTL 6.47e-01 -0.0322 0.0701 0.417 CD4T L1
ENSG00000125703 ATG4C 615252 sc-eQTL 8.38e-01 0.0116 0.0567 0.417 CD4T L1
ENSG00000142856 ITGB3BP -194337 sc-eQTL 5.37e-08 -0.423 0.075 0.417 CD4T L1
ENSG00000162607 USP1 963087 sc-eQTL 2.03e-01 -0.0699 0.0548 0.417 CD4T L1
ENSG00000203965 EFCAB7 -123988 sc-eQTL 3.71e-03 -0.208 0.0708 0.417 CD4T L1
ENSG00000079739 PGM1 -194027 sc-eQTL 7.32e-01 0.0238 0.0694 0.417 CD8T L1
ENSG00000088035 ALG6 31809 sc-eQTL 6.85e-01 -0.031 0.0765 0.417 CD8T L1
ENSG00000116641 DOCK7 710998 sc-eQTL 4.54e-01 -0.0581 0.0774 0.417 CD8T L1
ENSG00000125703 ATG4C 615252 sc-eQTL 7.33e-01 0.0252 0.0736 0.417 CD8T L1
ENSG00000142856 ITGB3BP -194337 sc-eQTL 1.73e-09 -0.476 0.0756 0.417 CD8T L1
ENSG00000162607 USP1 963087 sc-eQTL 9.12e-01 0.00713 0.0642 0.417 CD8T L1
ENSG00000203965 EFCAB7 -123988 sc-eQTL 1.42e-04 -0.307 0.0793 0.417 CD8T L1
ENSG00000079739 PGM1 -194027 sc-eQTL 2.46e-01 0.0889 0.0765 0.417 DC L1
ENSG00000088035 ALG6 31809 sc-eQTL 2.44e-01 0.0922 0.0789 0.417 DC L1
ENSG00000116641 DOCK7 710998 sc-eQTL 8.88e-01 0.0115 0.0811 0.417 DC L1
ENSG00000125703 ATG4C 615252 sc-eQTL 8.73e-01 -0.0102 0.0635 0.417 DC L1
ENSG00000142856 ITGB3BP -194337 sc-eQTL 4.19e-01 -0.0717 0.0886 0.417 DC L1
ENSG00000162607 USP1 963087 sc-eQTL 1.90e-01 0.102 0.0772 0.417 DC L1
ENSG00000203965 EFCAB7 -123988 sc-eQTL 1.58e-01 -0.109 0.0769 0.417 DC L1
ENSG00000079739 PGM1 -194027 sc-eQTL 5.68e-01 0.0429 0.0751 0.417 Mono L1
ENSG00000088035 ALG6 31809 sc-eQTL 4.50e-01 0.0592 0.0783 0.417 Mono L1
ENSG00000116641 DOCK7 710998 sc-eQTL 1.90e-01 -0.0993 0.0755 0.417 Mono L1
ENSG00000125703 ATG4C 615252 sc-eQTL 4.89e-01 0.0355 0.0512 0.417 Mono L1
ENSG00000142856 ITGB3BP -194337 sc-eQTL 1.16e-03 -0.26 0.079 0.417 Mono L1
ENSG00000162607 USP1 963087 sc-eQTL 6.59e-01 -0.0293 0.0665 0.417 Mono L1
ENSG00000079739 PGM1 -194027 sc-eQTL 6.50e-01 0.0291 0.0639 0.416 NK L1
ENSG00000088035 ALG6 31809 sc-eQTL 7.87e-02 0.131 0.0744 0.416 NK L1
ENSG00000116641 DOCK7 710998 sc-eQTL 4.73e-01 0.0443 0.0617 0.416 NK L1
ENSG00000125703 ATG4C 615252 sc-eQTL 9.39e-01 -0.0051 0.0663 0.416 NK L1
ENSG00000142856 ITGB3BP -194337 sc-eQTL 6.45e-04 -0.278 0.0802 0.416 NK L1
ENSG00000162607 USP1 963087 sc-eQTL 8.78e-01 0.0113 0.0737 0.416 NK L1
ENSG00000203965 EFCAB7 -123988 sc-eQTL 3.75e-01 -0.0794 0.0893 0.416 NK L1
ENSG00000079739 PGM1 -194027 sc-eQTL 3.24e-01 -0.0722 0.073 0.417 Other_T L1
ENSG00000088035 ALG6 31809 sc-eQTL 8.32e-01 -0.0156 0.0735 0.417 Other_T L1
ENSG00000116641 DOCK7 710998 sc-eQTL 7.82e-01 0.0208 0.0751 0.417 Other_T L1
ENSG00000125703 ATG4C 615252 sc-eQTL 1.12e-02 0.164 0.064 0.417 Other_T L1
ENSG00000142856 ITGB3BP -194337 sc-eQTL 2.92e-02 -0.125 0.057 0.417 Other_T L1
ENSG00000162607 USP1 963087 sc-eQTL 4.18e-01 -0.0405 0.0499 0.417 Other_T L1
ENSG00000203965 EFCAB7 -123988 sc-eQTL 3.77e-01 -0.0786 0.0888 0.417 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -194027 sc-eQTL 3.61e-01 0.0899 0.0982 0.416 B_Activated L2
ENSG00000088035 ALG6 31809 sc-eQTL 2.24e-01 0.115 0.0939 0.416 B_Activated L2
ENSG00000116641 DOCK7 710998 sc-eQTL 2.06e-01 0.111 0.0874 0.416 B_Activated L2
ENSG00000125703 ATG4C 615252 sc-eQTL 6.23e-01 0.0454 0.0923 0.416 B_Activated L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 1.14e-01 -0.142 0.0896 0.416 B_Activated L2
ENSG00000162607 USP1 963087 sc-eQTL 6.21e-01 -0.0484 0.0978 0.416 B_Activated L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 3.22e-01 -0.0845 0.0852 0.416 B_Activated L2
ENSG00000079739 PGM1 -194027 sc-eQTL 3.10e-01 0.087 0.0856 0.416 B_Intermediate L2
ENSG00000088035 ALG6 31809 sc-eQTL 4.20e-01 -0.0703 0.087 0.416 B_Intermediate L2
ENSG00000116641 DOCK7 710998 sc-eQTL 6.49e-01 0.0379 0.0832 0.416 B_Intermediate L2
ENSG00000125703 ATG4C 615252 sc-eQTL 3.80e-02 0.146 0.0697 0.416 B_Intermediate L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 6.55e-03 -0.226 0.0824 0.416 B_Intermediate L2
ENSG00000162607 USP1 963087 sc-eQTL 6.40e-01 -0.0392 0.0837 0.416 B_Intermediate L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 2.03e-03 -0.254 0.0813 0.416 B_Intermediate L2
ENSG00000079739 PGM1 -194027 sc-eQTL 7.28e-01 -0.0295 0.0847 0.416 B_Memory L2
ENSG00000088035 ALG6 31809 sc-eQTL 5.95e-01 0.0459 0.0861 0.416 B_Memory L2
ENSG00000116641 DOCK7 710998 sc-eQTL 1.20e-01 -0.125 0.0804 0.416 B_Memory L2
ENSG00000125703 ATG4C 615252 sc-eQTL 9.15e-01 -0.00818 0.0768 0.416 B_Memory L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 7.41e-02 -0.157 0.0872 0.416 B_Memory L2
ENSG00000162607 USP1 963087 sc-eQTL 1.35e-01 -0.132 0.0882 0.416 B_Memory L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 4.43e-02 -0.175 0.0864 0.416 B_Memory L2
ENSG00000079739 PGM1 -194027 sc-eQTL 1.78e-01 0.116 0.0859 0.417 B_Naive1 L2
ENSG00000088035 ALG6 31809 sc-eQTL 8.66e-01 0.0146 0.0866 0.417 B_Naive1 L2
ENSG00000116641 DOCK7 710998 sc-eQTL 8.55e-01 -0.0152 0.083 0.417 B_Naive1 L2
ENSG00000125703 ATG4C 615252 sc-eQTL 8.33e-01 -0.0135 0.0639 0.417 B_Naive1 L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 8.05e-06 -0.37 0.0809 0.417 B_Naive1 L2
ENSG00000162607 USP1 963087 sc-eQTL 5.90e-01 0.0402 0.0745 0.417 B_Naive1 L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 2.36e-03 -0.273 0.0885 0.417 B_Naive1 L2
ENSG00000079739 PGM1 -194027 sc-eQTL 4.99e-01 0.0577 0.0853 0.416 B_Naive2 L2
ENSG00000088035 ALG6 31809 sc-eQTL 5.19e-01 0.0574 0.0889 0.416 B_Naive2 L2
ENSG00000116641 DOCK7 710998 sc-eQTL 9.98e-01 -0.000254 0.0856 0.416 B_Naive2 L2
ENSG00000125703 ATG4C 615252 sc-eQTL 3.58e-01 -0.0758 0.0822 0.416 B_Naive2 L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 8.72e-06 -0.389 0.0852 0.416 B_Naive2 L2
ENSG00000162607 USP1 963087 sc-eQTL 5.61e-01 0.0495 0.085 0.416 B_Naive2 L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 1.99e-01 0.114 0.0886 0.416 B_Naive2 L2
ENSG00000079739 PGM1 -194027 sc-eQTL 7.80e-01 -0.024 0.0859 0.414 CD4_CTL L2
ENSG00000088035 ALG6 31809 sc-eQTL 7.73e-01 -0.0262 0.0908 0.414 CD4_CTL L2
ENSG00000116641 DOCK7 710998 sc-eQTL 3.16e-01 0.0797 0.0792 0.414 CD4_CTL L2
ENSG00000125703 ATG4C 615252 sc-eQTL 8.66e-01 0.0139 0.0822 0.414 CD4_CTL L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 6.26e-01 -0.0429 0.0878 0.414 CD4_CTL L2
ENSG00000162607 USP1 963087 sc-eQTL 8.34e-01 -0.0176 0.0836 0.414 CD4_CTL L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 8.78e-01 0.0128 0.0835 0.414 CD4_CTL L2
ENSG00000079739 PGM1 -194027 sc-eQTL 3.45e-01 0.0664 0.0701 0.417 CD4_Naive L2
ENSG00000088035 ALG6 31809 sc-eQTL 3.93e-01 0.0652 0.0762 0.417 CD4_Naive L2
ENSG00000116641 DOCK7 710998 sc-eQTL 9.01e-01 -0.00931 0.075 0.417 CD4_Naive L2
ENSG00000125703 ATG4C 615252 sc-eQTL 7.30e-01 0.0229 0.0663 0.417 CD4_Naive L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 2.50e-07 -0.406 0.0761 0.417 CD4_Naive L2
ENSG00000162607 USP1 963087 sc-eQTL 2.98e-01 -0.0645 0.0618 0.417 CD4_Naive L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 3.11e-02 -0.173 0.0796 0.417 CD4_Naive L2
ENSG00000079739 PGM1 -194027 sc-eQTL 9.69e-01 -0.00282 0.0734 0.417 CD4_TCM L2
ENSG00000088035 ALG6 31809 sc-eQTL 6.88e-01 0.0343 0.0852 0.417 CD4_TCM L2
ENSG00000116641 DOCK7 710998 sc-eQTL 1.16e-01 -0.119 0.0751 0.417 CD4_TCM L2
ENSG00000125703 ATG4C 615252 sc-eQTL 1.88e-01 -0.0966 0.0732 0.417 CD4_TCM L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 1.65e-04 -0.321 0.0838 0.417 CD4_TCM L2
ENSG00000162607 USP1 963087 sc-eQTL 1.95e-01 -0.092 0.0708 0.417 CD4_TCM L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 2.63e-03 -0.25 0.0821 0.417 CD4_TCM L2
ENSG00000079739 PGM1 -194027 sc-eQTL 1.02e-02 0.219 0.0846 0.417 CD4_TEM L2
ENSG00000088035 ALG6 31809 sc-eQTL 6.15e-01 0.0435 0.0863 0.417 CD4_TEM L2
ENSG00000116641 DOCK7 710998 sc-eQTL 8.13e-01 0.0199 0.0842 0.417 CD4_TEM L2
ENSG00000125703 ATG4C 615252 sc-eQTL 3.94e-01 0.0697 0.0817 0.417 CD4_TEM L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 1.05e-02 -0.215 0.0831 0.417 CD4_TEM L2
ENSG00000162607 USP1 963087 sc-eQTL 4.84e-03 -0.224 0.0785 0.417 CD4_TEM L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 1.88e-01 -0.115 0.0871 0.417 CD4_TEM L2
ENSG00000079739 PGM1 -194027 sc-eQTL 5.96e-01 0.0417 0.0784 0.417 CD8_CTL L2
ENSG00000088035 ALG6 31809 sc-eQTL 3.85e-01 -0.0724 0.0833 0.417 CD8_CTL L2
ENSG00000116641 DOCK7 710998 sc-eQTL 4.06e-01 -0.0659 0.079 0.417 CD8_CTL L2
ENSG00000125703 ATG4C 615252 sc-eQTL 8.29e-02 0.146 0.0837 0.417 CD8_CTL L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 2.58e-02 -0.194 0.0866 0.417 CD8_CTL L2
ENSG00000162607 USP1 963087 sc-eQTL 4.37e-01 0.061 0.0784 0.417 CD8_CTL L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 2.05e-01 -0.114 0.0894 0.417 CD8_CTL L2
ENSG00000079739 PGM1 -194027 sc-eQTL 1.55e-01 0.113 0.0795 0.417 CD8_Naive L2
ENSG00000088035 ALG6 31809 sc-eQTL 7.65e-01 0.0247 0.0827 0.417 CD8_Naive L2
ENSG00000116641 DOCK7 710998 sc-eQTL 8.23e-01 -0.0192 0.0855 0.417 CD8_Naive L2
ENSG00000125703 ATG4C 615252 sc-eQTL 5.87e-01 -0.0446 0.082 0.417 CD8_Naive L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 7.79e-08 -0.432 0.0776 0.417 CD8_Naive L2
ENSG00000162607 USP1 963087 sc-eQTL 1.46e-01 -0.102 0.0699 0.417 CD8_Naive L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 5.89e-02 -0.147 0.0777 0.417 CD8_Naive L2
ENSG00000079739 PGM1 -194027 sc-eQTL 9.97e-01 -0.000362 0.0865 0.419 CD8_TCM L2
ENSG00000088035 ALG6 31809 sc-eQTL 5.70e-01 -0.0498 0.0875 0.419 CD8_TCM L2
ENSG00000116641 DOCK7 710998 sc-eQTL 5.90e-01 -0.0461 0.0854 0.419 CD8_TCM L2
ENSG00000125703 ATG4C 615252 sc-eQTL 5.27e-01 -0.0553 0.0873 0.419 CD8_TCM L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 9.86e-02 -0.14 0.0843 0.419 CD8_TCM L2
ENSG00000162607 USP1 963087 sc-eQTL 6.45e-01 -0.0377 0.0817 0.419 CD8_TCM L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 9.28e-02 -0.145 0.0859 0.419 CD8_TCM L2
ENSG00000079739 PGM1 -194027 sc-eQTL 1.46e-01 -0.13 0.0889 0.402 CD8_TEM L2
ENSG00000088035 ALG6 31809 sc-eQTL 6.55e-01 0.0401 0.0897 0.402 CD8_TEM L2
ENSG00000116641 DOCK7 710998 sc-eQTL 2.79e-01 -0.0941 0.0867 0.402 CD8_TEM L2
ENSG00000125703 ATG4C 615252 sc-eQTL 3.64e-02 0.174 0.0827 0.402 CD8_TEM L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 2.36e-02 -0.204 0.0893 0.402 CD8_TEM L2
ENSG00000162607 USP1 963087 sc-eQTL 6.27e-01 0.042 0.0863 0.402 CD8_TEM L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 4.63e-02 -0.174 0.0869 0.402 CD8_TEM L2
ENSG00000079739 PGM1 -194027 sc-eQTL 5.76e-01 -0.0477 0.0852 0.416 MAIT L2
ENSG00000088035 ALG6 31809 sc-eQTL 4.42e-01 -0.065 0.0842 0.416 MAIT L2
ENSG00000116641 DOCK7 710998 sc-eQTL 8.21e-01 0.0183 0.0808 0.416 MAIT L2
ENSG00000125703 ATG4C 615252 sc-eQTL 6.06e-02 0.159 0.0845 0.416 MAIT L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 1.20e-02 -0.213 0.0841 0.416 MAIT L2
ENSG00000162607 USP1 963087 sc-eQTL 2.95e-01 -0.0887 0.0845 0.416 MAIT L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 9.61e-01 -0.00432 0.0879 0.416 MAIT L2
ENSG00000079739 PGM1 -194027 sc-eQTL 8.25e-01 0.0188 0.0846 0.416 NK_CD56bright L2
ENSG00000088035 ALG6 31809 sc-eQTL 1.03e-01 0.141 0.0862 0.416 NK_CD56bright L2
ENSG00000116641 DOCK7 710998 sc-eQTL 5.10e-01 0.0496 0.0751 0.416 NK_CD56bright L2
ENSG00000125703 ATG4C 615252 sc-eQTL 9.34e-01 0.007 0.084 0.416 NK_CD56bright L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 5.88e-01 -0.0475 0.0874 0.416 NK_CD56bright L2
ENSG00000162607 USP1 963087 sc-eQTL 7.59e-01 -0.0277 0.0901 0.416 NK_CD56bright L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 9.13e-02 -0.145 0.0856 0.416 NK_CD56bright L2
ENSG00000079739 PGM1 -194027 sc-eQTL 8.74e-01 0.0105 0.0663 0.416 NK_CD56dim L2
ENSG00000088035 ALG6 31809 sc-eQTL 5.23e-01 0.0538 0.084 0.416 NK_CD56dim L2
ENSG00000116641 DOCK7 710998 sc-eQTL 9.39e-01 -0.00564 0.0732 0.416 NK_CD56dim L2
ENSG00000125703 ATG4C 615252 sc-eQTL 3.00e-02 -0.161 0.0735 0.416 NK_CD56dim L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 1.99e-01 -0.108 0.0842 0.416 NK_CD56dim L2
ENSG00000162607 USP1 963087 sc-eQTL 9.69e-01 0.00322 0.082 0.416 NK_CD56dim L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 6.56e-01 -0.0407 0.0913 0.416 NK_CD56dim L2
ENSG00000079739 PGM1 -194027 sc-eQTL 9.43e-01 -0.00655 0.0913 0.42 NK_HLA L2
ENSG00000088035 ALG6 31809 sc-eQTL 3.25e-01 0.0932 0.0944 0.42 NK_HLA L2
ENSG00000116641 DOCK7 710998 sc-eQTL 5.26e-01 -0.0459 0.0723 0.42 NK_HLA L2
ENSG00000125703 ATG4C 615252 sc-eQTL 8.42e-01 0.0168 0.0842 0.42 NK_HLA L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 6.41e-02 -0.163 0.0876 0.42 NK_HLA L2
ENSG00000162607 USP1 963087 sc-eQTL 6.42e-01 -0.0431 0.0925 0.42 NK_HLA L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 3.45e-01 0.0795 0.084 0.42 NK_HLA L2
ENSG00000079739 PGM1 -194027 sc-eQTL 4.19e-01 0.059 0.0729 0.416 NK_cytokine L2
ENSG00000088035 ALG6 31809 sc-eQTL 7.07e-01 0.0311 0.0825 0.416 NK_cytokine L2
ENSG00000116641 DOCK7 710998 sc-eQTL 6.83e-01 0.0313 0.0764 0.416 NK_cytokine L2
ENSG00000125703 ATG4C 615252 sc-eQTL 1.04e-01 0.127 0.0777 0.416 NK_cytokine L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 2.21e-03 -0.245 0.0792 0.416 NK_cytokine L2
ENSG00000162607 USP1 963087 sc-eQTL 2.36e-01 0.101 0.0849 0.416 NK_cytokine L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 9.29e-01 0.00771 0.0863 0.416 NK_cytokine L2
ENSG00000079739 PGM1 -194027 sc-eQTL 2.66e-01 -0.12 0.107 0.415 PB L2
ENSG00000088035 ALG6 31809 sc-eQTL 7.65e-01 0.0338 0.113 0.415 PB L2
ENSG00000116641 DOCK7 710998 sc-eQTL 8.73e-02 -0.206 0.119 0.415 PB L2
ENSG00000125703 ATG4C 615252 sc-eQTL 7.25e-01 0.0371 0.105 0.415 PB L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 7.09e-02 -0.189 0.104 0.415 PB L2
ENSG00000162607 USP1 963087 sc-eQTL 5.64e-01 0.0604 0.104 0.415 PB L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 1.12e-01 -0.183 0.114 0.415 PB L2
ENSG00000079739 PGM1 -194027 sc-eQTL 3.51e-01 -0.0743 0.0796 0.415 Pro_T L2
ENSG00000088035 ALG6 31809 sc-eQTL 9.14e-01 -0.0088 0.0811 0.415 Pro_T L2
ENSG00000116641 DOCK7 710998 sc-eQTL 2.50e-01 -0.0936 0.0811 0.415 Pro_T L2
ENSG00000125703 ATG4C 615252 sc-eQTL 3.63e-01 -0.0648 0.0711 0.415 Pro_T L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 1.80e-01 0.0957 0.0712 0.415 Pro_T L2
ENSG00000162607 USP1 963087 sc-eQTL 5.03e-01 -0.0329 0.0491 0.415 Pro_T L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 7.13e-01 0.0306 0.083 0.415 Pro_T L2
ENSG00000079739 PGM1 -194027 sc-eQTL 6.09e-01 -0.0428 0.0836 0.417 Treg L2
ENSG00000088035 ALG6 31809 sc-eQTL 1.36e-01 0.133 0.089 0.417 Treg L2
ENSG00000116641 DOCK7 710998 sc-eQTL 5.88e-01 0.0445 0.0821 0.417 Treg L2
ENSG00000125703 ATG4C 615252 sc-eQTL 6.09e-01 0.0429 0.0839 0.417 Treg L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 6.15e-01 0.0442 0.0878 0.417 Treg L2
ENSG00000162607 USP1 963087 sc-eQTL 4.77e-01 0.0604 0.0849 0.417 Treg L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 8.81e-01 -0.0126 0.084 0.417 Treg L2
ENSG00000079739 PGM1 -194027 sc-eQTL 7.36e-01 0.0278 0.0826 0.412 cDC L2
ENSG00000088035 ALG6 31809 sc-eQTL 5.27e-01 -0.0531 0.0837 0.412 cDC L2
ENSG00000116641 DOCK7 710998 sc-eQTL 6.63e-01 0.0358 0.0822 0.412 cDC L2
ENSG00000125703 ATG4C 615252 sc-eQTL 8.96e-01 -0.00932 0.0714 0.412 cDC L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 3.20e-01 -0.0899 0.0902 0.412 cDC L2
ENSG00000162607 USP1 963087 sc-eQTL 7.47e-01 -0.0261 0.0805 0.412 cDC L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 6.37e-01 -0.0344 0.0727 0.412 cDC L2
ENSG00000079739 PGM1 -194027 sc-eQTL 3.21e-01 0.0773 0.0778 0.417 cMono_IL1B L2
ENSG00000088035 ALG6 31809 sc-eQTL 5.86e-01 0.0426 0.078 0.417 cMono_IL1B L2
ENSG00000116641 DOCK7 710998 sc-eQTL 7.82e-02 -0.145 0.0817 0.417 cMono_IL1B L2
ENSG00000125703 ATG4C 615252 sc-eQTL 9.65e-01 0.00251 0.0579 0.417 cMono_IL1B L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 1.00e-04 -0.314 0.0791 0.417 cMono_IL1B L2
ENSG00000162607 USP1 963087 sc-eQTL 8.16e-01 0.0169 0.0723 0.417 cMono_IL1B L2
ENSG00000079739 PGM1 -194027 sc-eQTL 8.37e-01 0.0179 0.0867 0.417 cMono_S100A L2
ENSG00000088035 ALG6 31809 sc-eQTL 7.76e-01 -0.0251 0.0879 0.417 cMono_S100A L2
ENSG00000116641 DOCK7 710998 sc-eQTL 5.63e-01 0.0471 0.0814 0.417 cMono_S100A L2
ENSG00000125703 ATG4C 615252 sc-eQTL 1.47e-01 0.102 0.0702 0.417 cMono_S100A L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 5.22e-01 -0.051 0.0795 0.417 cMono_S100A L2
ENSG00000162607 USP1 963087 sc-eQTL 3.33e-02 -0.174 0.0811 0.417 cMono_S100A L2
ENSG00000079739 PGM1 -194027 sc-eQTL 7.14e-01 0.0345 0.094 0.427 gdT L2
ENSG00000088035 ALG6 31809 sc-eQTL 8.58e-01 -0.0179 0.1 0.427 gdT L2
ENSG00000116641 DOCK7 710998 sc-eQTL 1.52e-01 0.141 0.0977 0.427 gdT L2
ENSG00000125703 ATG4C 615252 sc-eQTL 2.86e-01 0.1 0.0936 0.427 gdT L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 1.60e-01 -0.14 0.0991 0.427 gdT L2
ENSG00000162607 USP1 963087 sc-eQTL 6.49e-01 -0.043 0.0944 0.427 gdT L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 7.90e-01 0.0262 0.0982 0.427 gdT L2
ENSG00000079739 PGM1 -194027 sc-eQTL 6.20e-02 0.163 0.0871 0.413 intMono L2
ENSG00000088035 ALG6 31809 sc-eQTL 4.04e-01 0.0682 0.0816 0.413 intMono L2
ENSG00000116641 DOCK7 710998 sc-eQTL 7.41e-01 0.0276 0.0835 0.413 intMono L2
ENSG00000125703 ATG4C 615252 sc-eQTL 3.95e-01 0.0678 0.0796 0.413 intMono L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 5.92e-03 -0.24 0.0862 0.413 intMono L2
ENSG00000162607 USP1 963087 sc-eQTL 9.68e-01 0.00357 0.0893 0.413 intMono L2
ENSG00000079739 PGM1 -194027 sc-eQTL 9.58e-01 0.00412 0.0776 0.416 ncMono L2
ENSG00000088035 ALG6 31809 sc-eQTL 3.30e-01 -0.083 0.085 0.416 ncMono L2
ENSG00000116641 DOCK7 710998 sc-eQTL 2.54e-01 -0.0956 0.0836 0.416 ncMono L2
ENSG00000125703 ATG4C 615252 sc-eQTL 3.03e-01 -0.0807 0.0781 0.416 ncMono L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 2.64e-01 -0.0916 0.0817 0.416 ncMono L2
ENSG00000162607 USP1 963087 sc-eQTL 6.42e-01 0.039 0.0837 0.416 ncMono L2
ENSG00000079739 PGM1 -194027 sc-eQTL 8.82e-01 -0.0141 0.0943 0.412 pDC L2
ENSG00000088035 ALG6 31809 sc-eQTL 3.37e-01 0.0883 0.0916 0.412 pDC L2
ENSG00000116641 DOCK7 710998 sc-eQTL 1.11e-01 -0.149 0.0931 0.412 pDC L2
ENSG00000125703 ATG4C 615252 sc-eQTL 6.54e-01 0.0378 0.0841 0.412 pDC L2
ENSG00000142856 ITGB3BP -194337 sc-eQTL 6.58e-01 -0.0419 0.0944 0.412 pDC L2
ENSG00000162607 USP1 963087 sc-eQTL 2.40e-01 0.113 0.0959 0.412 pDC L2
ENSG00000203965 EFCAB7 -123988 sc-eQTL 6.42e-01 -0.0389 0.0836 0.412 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -194027 sc-eQTL 6.53e-01 0.0364 0.0808 0.417 B_Memory LOneK1K
ENSG00000088035 ALG6 31809 sc-eQTL 7.82e-01 -0.0248 0.0893 0.417 B_Memory LOneK1K
ENSG00000116641 DOCK7 710998 sc-eQTL 5.98e-01 -0.041 0.0775 0.417 B_Memory LOneK1K
ENSG00000125703 ATG4C 615252 sc-eQTL 8.03e-02 0.109 0.0622 0.417 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -194337 sc-eQTL 2.79e-03 -0.244 0.0806 0.417 B_Memory LOneK1K
ENSG00000162607 USP1 963087 sc-eQTL 4.29e-01 -0.0633 0.0799 0.417 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -123988 sc-eQTL 1.72e-05 -0.361 0.0822 0.417 B_Memory LOneK1K
ENSG00000079739 PGM1 -194027 sc-eQTL 1.34e-01 0.126 0.0839 0.417 B_Naive LOneK1K
ENSG00000088035 ALG6 31809 sc-eQTL 6.28e-01 0.0421 0.0868 0.417 B_Naive LOneK1K
ENSG00000116641 DOCK7 710998 sc-eQTL 6.94e-01 -0.0319 0.0811 0.417 B_Naive LOneK1K
ENSG00000125703 ATG4C 615252 sc-eQTL 2.58e-01 -0.0699 0.0617 0.417 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -194337 sc-eQTL 2.36e-07 -0.439 0.0821 0.417 B_Naive LOneK1K
ENSG00000162607 USP1 963087 sc-eQTL 2.62e-01 0.0844 0.075 0.417 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -123988 sc-eQTL 7.61e-02 -0.156 0.0873 0.417 B_Naive LOneK1K
ENSG00000079739 PGM1 -194027 sc-eQTL 5.83e-01 0.0438 0.0797 0.417 CD14_Mono LOneK1K
ENSG00000088035 ALG6 31809 sc-eQTL 7.89e-01 0.0207 0.0772 0.417 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 710998 sc-eQTL 1.61e-01 -0.109 0.0774 0.417 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 615252 sc-eQTL 3.21e-01 0.0534 0.0536 0.417 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -194337 sc-eQTL 3.10e-03 -0.233 0.0779 0.417 CD14_Mono LOneK1K
ENSG00000162607 USP1 963087 sc-eQTL 2.04e-01 -0.0862 0.0677 0.417 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -194027 sc-eQTL 1.86e-01 0.1 0.0754 0.416 CD16_Mono LOneK1K
ENSG00000088035 ALG6 31809 sc-eQTL 7.48e-01 0.0277 0.086 0.416 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 710998 sc-eQTL 5.47e-01 -0.0512 0.085 0.416 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 615252 sc-eQTL 3.26e-01 -0.0712 0.0724 0.416 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -194337 sc-eQTL 9.37e-03 -0.217 0.0828 0.416 CD16_Mono LOneK1K
ENSG00000162607 USP1 963087 sc-eQTL 5.03e-01 0.053 0.079 0.416 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -194027 sc-eQTL 7.44e-01 0.0212 0.0649 0.416 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 31809 sc-eQTL 2.48e-01 0.0901 0.0778 0.416 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 710998 sc-eQTL 6.84e-01 0.0284 0.0698 0.416 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 615252 sc-eQTL 9.95e-01 -0.000457 0.0698 0.416 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -194337 sc-eQTL 1.07e-03 -0.267 0.0806 0.416 NK_CD56dim LOneK1K
ENSG00000162607 USP1 963087 sc-eQTL 4.77e-01 0.0534 0.075 0.416 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -123988 sc-eQTL 8.22e-01 -0.0206 0.0913 0.416 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -194027 eQTL 1.42e-13 0.13 0.0174 0.00301 0.00301 0.419
ENSG00000088035 ALG6 31809 eQTL 7.81e-06 0.059 0.0131 0.0 0.0 0.419
ENSG00000116641 DOCK7 711016 eQTL 0.0117 -0.0558 0.0221 0.0 0.0 0.419
ENSG00000116652 DLEU2L -147698 eQTL 0.000591 -0.0889 0.0258 0.00513 0.005 0.419
ENSG00000185483 ROR1 -374633 pQTL 0.00752 0.0357 0.0133 0.00144 0.0 0.416
ENSG00000203965 EFCAB7 -123988 eQTL 1.01e-07 -0.127 0.0237 0.0181 0.0171 0.419
ENSG00000230798 FOXD3-AS1 74943 eQTL 0.0304 0.0564 0.026 0.0 0.0 0.419

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -194027 6.46e-06 9.29e-06 1.28e-06 5.34e-06 1.82e-06 3.79e-06 9.75e-06 1.29e-06 7.7e-06 3.55e-06 9.35e-06 4.86e-06 1.13e-05 3.9e-06 2.12e-06 5.5e-06 3.99e-06 5.05e-06 2.57e-06 2.79e-06 5.1e-06 7.92e-06 5.51e-06 1.95e-06 1.15e-05 2.79e-06 3.99e-06 3.25e-06 7.08e-06 7.61e-06 4.07e-06 9.42e-07 1.29e-06 2.69e-06 2.8e-06 2.14e-06 1.79e-06 1.86e-06 1.37e-06 9.95e-07 1e-06 1e-05 1.6e-06 3.78e-07 6.7e-07 1.1e-06 1.3e-06 6.87e-07 5.24e-07
ENSG00000088035 ALG6 31809 3.86e-05 3.47e-05 6.54e-06 1.62e-05 6.62e-06 1.6e-05 4.83e-05 5.4e-06 3.6e-05 1.73e-05 4.33e-05 2.01e-05 5.27e-05 1.54e-05 7.83e-06 2.17e-05 1.96e-05 2.86e-05 8.6e-06 7.53e-06 1.78e-05 3.72e-05 3.45e-05 9.89e-06 4.95e-05 9.17e-06 1.63e-05 1.47e-05 3.49e-05 2.77e-05 2.32e-05 1.71e-06 3.07e-06 7.75e-06 1.28e-05 6.2e-06 3.57e-06 3.37e-06 5.29e-06 3.6e-06 1.78e-06 4.06e-05 3.99e-06 4.43e-07 2.79e-06 4.6e-06 4.55e-06 1.71e-06 1.53e-06