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Genes within 1Mb (chr1:63398717:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -194694 sc-eQTL 1.66e-01 0.105 0.0759 0.382 B L1
ENSG00000088035 ALG6 31142 sc-eQTL 3.63e-01 0.0719 0.0789 0.382 B L1
ENSG00000116641 DOCK7 710331 sc-eQTL 2.77e-01 -0.0859 0.0788 0.382 B L1
ENSG00000125703 ATG4C 614585 sc-eQTL 9.76e-01 -0.00164 0.0549 0.382 B L1
ENSG00000142856 ITGB3BP -195004 sc-eQTL 3.97e-07 -0.431 0.0822 0.382 B L1
ENSG00000162607 USP1 962420 sc-eQTL 5.62e-01 0.044 0.0758 0.382 B L1
ENSG00000203965 EFCAB7 -124655 sc-eQTL 6.62e-05 -0.351 0.0862 0.382 B L1
ENSG00000079739 PGM1 -194694 sc-eQTL 2.74e-01 0.0711 0.0648 0.382 CD4T L1
ENSG00000088035 ALG6 31142 sc-eQTL 3.91e-01 0.0616 0.0716 0.382 CD4T L1
ENSG00000116641 DOCK7 710331 sc-eQTL 5.64e-01 -0.0419 0.0726 0.382 CD4T L1
ENSG00000125703 ATG4C 614585 sc-eQTL 4.55e-01 0.0439 0.0586 0.382 CD4T L1
ENSG00000142856 ITGB3BP -195004 sc-eQTL 6.77e-06 -0.366 0.0794 0.382 CD4T L1
ENSG00000162607 USP1 962420 sc-eQTL 1.29e-01 -0.0863 0.0566 0.382 CD4T L1
ENSG00000203965 EFCAB7 -124655 sc-eQTL 2.93e-03 -0.22 0.0732 0.382 CD4T L1
ENSG00000079739 PGM1 -194694 sc-eQTL 8.77e-01 0.0111 0.0717 0.382 CD8T L1
ENSG00000088035 ALG6 31142 sc-eQTL 4.19e-01 -0.0639 0.0789 0.382 CD8T L1
ENSG00000116641 DOCK7 710331 sc-eQTL 6.93e-01 -0.0316 0.0801 0.382 CD8T L1
ENSG00000125703 ATG4C 614585 sc-eQTL 2.64e-01 0.0849 0.0759 0.382 CD8T L1
ENSG00000142856 ITGB3BP -195004 sc-eQTL 2.20e-07 -0.428 0.0798 0.382 CD8T L1
ENSG00000162607 USP1 962420 sc-eQTL 5.46e-01 -0.04 0.0662 0.382 CD8T L1
ENSG00000203965 EFCAB7 -124655 sc-eQTL 5.33e-04 -0.29 0.0824 0.382 CD8T L1
ENSG00000079739 PGM1 -194694 sc-eQTL 4.84e-01 0.0563 0.0804 0.381 DC L1
ENSG00000088035 ALG6 31142 sc-eQTL 5.73e-02 0.157 0.0823 0.381 DC L1
ENSG00000116641 DOCK7 710331 sc-eQTL 7.37e-01 -0.0286 0.0851 0.381 DC L1
ENSG00000125703 ATG4C 614585 sc-eQTL 8.74e-01 -0.0106 0.0666 0.381 DC L1
ENSG00000142856 ITGB3BP -195004 sc-eQTL 2.63e-01 -0.104 0.0928 0.381 DC L1
ENSG00000162607 USP1 962420 sc-eQTL 2.60e-01 0.0916 0.081 0.381 DC L1
ENSG00000203965 EFCAB7 -124655 sc-eQTL 2.49e-01 -0.0933 0.0808 0.381 DC L1
ENSG00000079739 PGM1 -194694 sc-eQTL 7.43e-01 0.0254 0.0772 0.382 Mono L1
ENSG00000088035 ALG6 31142 sc-eQTL 5.44e-01 0.049 0.0805 0.382 Mono L1
ENSG00000116641 DOCK7 710331 sc-eQTL 8.50e-02 -0.134 0.0774 0.382 Mono L1
ENSG00000125703 ATG4C 614585 sc-eQTL 1.06e-01 0.085 0.0524 0.382 Mono L1
ENSG00000142856 ITGB3BP -195004 sc-eQTL 1.84e-03 -0.257 0.0814 0.382 Mono L1
ENSG00000162607 USP1 962420 sc-eQTL 8.18e-01 -0.0157 0.0684 0.382 Mono L1
ENSG00000079739 PGM1 -194694 sc-eQTL 5.49e-01 0.0396 0.0661 0.382 NK L1
ENSG00000088035 ALG6 31142 sc-eQTL 3.20e-02 0.166 0.0768 0.382 NK L1
ENSG00000116641 DOCK7 710331 sc-eQTL 6.90e-01 0.0255 0.0639 0.382 NK L1
ENSG00000125703 ATG4C 614585 sc-eQTL 9.73e-01 0.00229 0.0686 0.382 NK L1
ENSG00000142856 ITGB3BP -195004 sc-eQTL 1.42e-03 -0.269 0.0833 0.382 NK L1
ENSG00000162607 USP1 962420 sc-eQTL 9.69e-01 0.00301 0.0762 0.382 NK L1
ENSG00000203965 EFCAB7 -124655 sc-eQTL 4.79e-01 -0.0657 0.0925 0.382 NK L1
ENSG00000079739 PGM1 -194694 sc-eQTL 5.65e-01 -0.0434 0.0753 0.382 Other_T L1
ENSG00000088035 ALG6 31142 sc-eQTL 7.49e-01 -0.0243 0.0757 0.382 Other_T L1
ENSG00000116641 DOCK7 710331 sc-eQTL 6.11e-01 0.0394 0.0772 0.382 Other_T L1
ENSG00000125703 ATG4C 614585 sc-eQTL 1.95e-02 0.155 0.066 0.382 Other_T L1
ENSG00000142856 ITGB3BP -195004 sc-eQTL 2.79e-01 -0.0643 0.0591 0.382 Other_T L1
ENSG00000162607 USP1 962420 sc-eQTL 4.31e-01 -0.0405 0.0513 0.382 Other_T L1
ENSG00000203965 EFCAB7 -124655 sc-eQTL 9.08e-01 -0.0106 0.0915 0.382 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -194694 sc-eQTL 3.73e-01 0.0914 0.102 0.378 B_Activated L2
ENSG00000088035 ALG6 31142 sc-eQTL 2.73e-01 0.108 0.098 0.378 B_Activated L2
ENSG00000116641 DOCK7 710331 sc-eQTL 5.98e-01 0.0484 0.0914 0.378 B_Activated L2
ENSG00000125703 ATG4C 614585 sc-eQTL 7.01e-01 0.037 0.0962 0.378 B_Activated L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 1.30e-01 -0.142 0.0934 0.378 B_Activated L2
ENSG00000162607 USP1 962420 sc-eQTL 4.49e-01 -0.0773 0.102 0.378 B_Activated L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 3.78e-01 -0.0784 0.0888 0.378 B_Activated L2
ENSG00000079739 PGM1 -194694 sc-eQTL 9.99e-02 0.146 0.0883 0.382 B_Intermediate L2
ENSG00000088035 ALG6 31142 sc-eQTL 3.16e-01 -0.0906 0.09 0.382 B_Intermediate L2
ENSG00000116641 DOCK7 710331 sc-eQTL 8.75e-01 0.0136 0.0862 0.382 B_Intermediate L2
ENSG00000125703 ATG4C 614585 sc-eQTL 8.04e-02 0.127 0.0724 0.382 B_Intermediate L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 1.06e-02 -0.221 0.0856 0.382 B_Intermediate L2
ENSG00000162607 USP1 962420 sc-eQTL 5.15e-01 -0.0566 0.0867 0.382 B_Intermediate L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 1.21e-03 -0.275 0.084 0.382 B_Intermediate L2
ENSG00000079739 PGM1 -194694 sc-eQTL 9.00e-01 -0.011 0.0873 0.381 B_Memory L2
ENSG00000088035 ALG6 31142 sc-eQTL 3.47e-01 0.0835 0.0886 0.381 B_Memory L2
ENSG00000116641 DOCK7 710331 sc-eQTL 1.25e-01 -0.127 0.0828 0.381 B_Memory L2
ENSG00000125703 ATG4C 614585 sc-eQTL 9.27e-01 -0.00729 0.0791 0.381 B_Memory L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 1.36e-01 -0.135 0.0901 0.381 B_Memory L2
ENSG00000162607 USP1 962420 sc-eQTL 9.07e-02 -0.154 0.0907 0.381 B_Memory L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 5.24e-02 -0.174 0.0891 0.381 B_Memory L2
ENSG00000079739 PGM1 -194694 sc-eQTL 2.00e-01 0.115 0.0898 0.382 B_Naive1 L2
ENSG00000088035 ALG6 31142 sc-eQTL 7.41e-01 0.03 0.0905 0.382 B_Naive1 L2
ENSG00000116641 DOCK7 710331 sc-eQTL 7.02e-01 -0.0333 0.0867 0.382 B_Naive1 L2
ENSG00000125703 ATG4C 614585 sc-eQTL 7.61e-01 0.0203 0.0668 0.382 B_Naive1 L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 1.64e-04 -0.329 0.0857 0.382 B_Naive1 L2
ENSG00000162607 USP1 962420 sc-eQTL 2.49e-01 0.0899 0.0777 0.382 B_Naive1 L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 1.90e-03 -0.291 0.0924 0.382 B_Naive1 L2
ENSG00000079739 PGM1 -194694 sc-eQTL 6.01e-01 0.047 0.0897 0.382 B_Naive2 L2
ENSG00000088035 ALG6 31142 sc-eQTL 4.82e-01 0.0658 0.0935 0.382 B_Naive2 L2
ENSG00000116641 DOCK7 710331 sc-eQTL 7.28e-01 0.0313 0.09 0.382 B_Naive2 L2
ENSG00000125703 ATG4C 614585 sc-eQTL 8.91e-01 -0.0118 0.0866 0.382 B_Naive2 L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 5.13e-06 -0.418 0.0894 0.382 B_Naive2 L2
ENSG00000162607 USP1 962420 sc-eQTL 5.36e-01 0.0554 0.0893 0.382 B_Naive2 L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 1.65e-01 0.13 0.093 0.382 B_Naive2 L2
ENSG00000079739 PGM1 -194694 sc-eQTL 8.79e-01 -0.0136 0.0887 0.382 CD4_CTL L2
ENSG00000088035 ALG6 31142 sc-eQTL 3.72e-01 -0.0837 0.0936 0.382 CD4_CTL L2
ENSG00000116641 DOCK7 710331 sc-eQTL 2.06e-01 0.104 0.0817 0.382 CD4_CTL L2
ENSG00000125703 ATG4C 614585 sc-eQTL 6.33e-01 -0.0405 0.0848 0.382 CD4_CTL L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 6.22e-01 -0.0447 0.0907 0.382 CD4_CTL L2
ENSG00000162607 USP1 962420 sc-eQTL 3.59e-01 -0.0792 0.0862 0.382 CD4_CTL L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 6.26e-01 0.0421 0.0862 0.382 CD4_CTL L2
ENSG00000079739 PGM1 -194694 sc-eQTL 1.50e-01 0.104 0.0723 0.382 CD4_Naive L2
ENSG00000088035 ALG6 31142 sc-eQTL 6.02e-01 0.0412 0.0789 0.382 CD4_Naive L2
ENSG00000116641 DOCK7 710331 sc-eQTL 8.64e-01 -0.0133 0.0776 0.382 CD4_Naive L2
ENSG00000125703 ATG4C 614585 sc-eQTL 5.25e-01 0.0436 0.0685 0.382 CD4_Naive L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 4.25e-05 -0.337 0.0805 0.382 CD4_Naive L2
ENSG00000162607 USP1 962420 sc-eQTL 3.00e-01 -0.0664 0.0639 0.382 CD4_Naive L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 2.60e-02 -0.184 0.0823 0.382 CD4_Naive L2
ENSG00000079739 PGM1 -194694 sc-eQTL 8.21e-01 -0.0172 0.0758 0.382 CD4_TCM L2
ENSG00000088035 ALG6 31142 sc-eQTL 7.18e-01 0.0318 0.088 0.382 CD4_TCM L2
ENSG00000116641 DOCK7 710331 sc-eQTL 3.09e-02 -0.168 0.0771 0.382 CD4_TCM L2
ENSG00000125703 ATG4C 614585 sc-eQTL 3.51e-01 -0.0707 0.0758 0.382 CD4_TCM L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 1.06e-03 -0.29 0.0872 0.382 CD4_TCM L2
ENSG00000162607 USP1 962420 sc-eQTL 1.37e-01 -0.109 0.073 0.382 CD4_TCM L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 3.48e-03 -0.251 0.0849 0.382 CD4_TCM L2
ENSG00000079739 PGM1 -194694 sc-eQTL 7.34e-02 0.159 0.0882 0.382 CD4_TEM L2
ENSG00000088035 ALG6 31142 sc-eQTL 7.32e-01 0.0307 0.0893 0.382 CD4_TEM L2
ENSG00000116641 DOCK7 710331 sc-eQTL 7.92e-01 0.023 0.087 0.382 CD4_TEM L2
ENSG00000125703 ATG4C 614585 sc-eQTL 2.32e-01 0.101 0.0843 0.382 CD4_TEM L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 3.44e-03 -0.253 0.0855 0.382 CD4_TEM L2
ENSG00000162607 USP1 962420 sc-eQTL 2.97e-04 -0.295 0.0801 0.382 CD4_TEM L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 6.74e-01 -0.038 0.0904 0.382 CD4_TEM L2
ENSG00000079739 PGM1 -194694 sc-eQTL 9.44e-01 0.00577 0.0818 0.382 CD8_CTL L2
ENSG00000088035 ALG6 31142 sc-eQTL 7.90e-02 -0.152 0.0863 0.382 CD8_CTL L2
ENSG00000116641 DOCK7 710331 sc-eQTL 5.70e-01 -0.0469 0.0825 0.382 CD8_CTL L2
ENSG00000125703 ATG4C 614585 sc-eQTL 5.05e-02 0.171 0.087 0.382 CD8_CTL L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 6.82e-02 -0.166 0.0906 0.382 CD8_CTL L2
ENSG00000162607 USP1 962420 sc-eQTL 9.11e-01 0.00915 0.0818 0.382 CD8_CTL L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 2.02e-01 -0.119 0.0932 0.382 CD8_CTL L2
ENSG00000079739 PGM1 -194694 sc-eQTL 1.45e-01 0.12 0.0817 0.382 CD8_Naive L2
ENSG00000088035 ALG6 31142 sc-eQTL 8.11e-01 0.0203 0.0849 0.382 CD8_Naive L2
ENSG00000116641 DOCK7 710331 sc-eQTL 6.25e-01 -0.0429 0.0878 0.382 CD8_Naive L2
ENSG00000125703 ATG4C 614585 sc-eQTL 9.79e-01 -0.00224 0.0843 0.382 CD8_Naive L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 5.94e-07 -0.414 0.0805 0.382 CD8_Naive L2
ENSG00000162607 USP1 962420 sc-eQTL 8.22e-02 -0.125 0.0717 0.382 CD8_Naive L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 8.39e-02 -0.139 0.0799 0.382 CD8_Naive L2
ENSG00000079739 PGM1 -194694 sc-eQTL 9.53e-01 -0.00531 0.0892 0.384 CD8_TCM L2
ENSG00000088035 ALG6 31142 sc-eQTL 6.09e-01 -0.0463 0.0902 0.384 CD8_TCM L2
ENSG00000116641 DOCK7 710331 sc-eQTL 6.28e-01 -0.0428 0.0881 0.384 CD8_TCM L2
ENSG00000125703 ATG4C 614585 sc-eQTL 9.04e-01 -0.0109 0.0901 0.384 CD8_TCM L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 1.78e-01 -0.118 0.0872 0.384 CD8_TCM L2
ENSG00000162607 USP1 962420 sc-eQTL 8.17e-01 -0.0195 0.0843 0.384 CD8_TCM L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 9.74e-02 -0.148 0.0886 0.384 CD8_TCM L2
ENSG00000079739 PGM1 -194694 sc-eQTL 7.50e-02 -0.163 0.0909 0.37 CD8_TEM L2
ENSG00000088035 ALG6 31142 sc-eQTL 6.24e-01 0.0451 0.0919 0.37 CD8_TEM L2
ENSG00000116641 DOCK7 710331 sc-eQTL 3.50e-01 -0.0833 0.0889 0.37 CD8_TEM L2
ENSG00000125703 ATG4C 614585 sc-eQTL 3.55e-02 0.179 0.0847 0.37 CD8_TEM L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 9.25e-02 -0.156 0.0921 0.37 CD8_TEM L2
ENSG00000162607 USP1 962420 sc-eQTL 7.19e-01 0.0319 0.0885 0.37 CD8_TEM L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 6.06e-02 -0.168 0.0891 0.37 CD8_TEM L2
ENSG00000079739 PGM1 -194694 sc-eQTL 8.53e-01 -0.0163 0.0879 0.381 MAIT L2
ENSG00000088035 ALG6 31142 sc-eQTL 1.87e-01 -0.115 0.0866 0.381 MAIT L2
ENSG00000116641 DOCK7 710331 sc-eQTL 5.91e-01 0.0448 0.0833 0.381 MAIT L2
ENSG00000125703 ATG4C 614585 sc-eQTL 4.52e-02 0.175 0.0871 0.381 MAIT L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 6.63e-02 -0.161 0.0873 0.381 MAIT L2
ENSG00000162607 USP1 962420 sc-eQTL 6.21e-01 -0.0433 0.0873 0.381 MAIT L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 4.34e-01 0.071 0.0905 0.381 MAIT L2
ENSG00000079739 PGM1 -194694 sc-eQTL 5.12e-01 0.0574 0.0874 0.384 NK_CD56bright L2
ENSG00000088035 ALG6 31142 sc-eQTL 2.02e-01 0.114 0.0894 0.384 NK_CD56bright L2
ENSG00000116641 DOCK7 710331 sc-eQTL 7.01e-01 0.0298 0.0777 0.384 NK_CD56bright L2
ENSG00000125703 ATG4C 614585 sc-eQTL 5.52e-01 0.0517 0.0868 0.384 NK_CD56bright L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 6.30e-01 -0.0437 0.0904 0.384 NK_CD56bright L2
ENSG00000162607 USP1 962420 sc-eQTL 8.30e-01 -0.0201 0.0933 0.384 NK_CD56bright L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 9.65e-02 -0.148 0.0886 0.384 NK_CD56bright L2
ENSG00000079739 PGM1 -194694 sc-eQTL 7.66e-01 0.0204 0.0684 0.384 NK_CD56dim L2
ENSG00000088035 ALG6 31142 sc-eQTL 3.12e-01 0.0877 0.0866 0.384 NK_CD56dim L2
ENSG00000116641 DOCK7 710331 sc-eQTL 8.25e-01 -0.0167 0.0755 0.384 NK_CD56dim L2
ENSG00000125703 ATG4C 614585 sc-eQTL 3.39e-02 -0.162 0.0759 0.384 NK_CD56dim L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 1.54e-01 -0.124 0.0869 0.384 NK_CD56dim L2
ENSG00000162607 USP1 962420 sc-eQTL 6.01e-01 0.0443 0.0846 0.384 NK_CD56dim L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 9.53e-01 0.00558 0.0943 0.384 NK_CD56dim L2
ENSG00000079739 PGM1 -194694 sc-eQTL 9.02e-01 -0.0116 0.094 0.388 NK_HLA L2
ENSG00000088035 ALG6 31142 sc-eQTL 1.17e-01 0.153 0.0969 0.388 NK_HLA L2
ENSG00000116641 DOCK7 710331 sc-eQTL 6.37e-01 -0.0352 0.0745 0.388 NK_HLA L2
ENSG00000125703 ATG4C 614585 sc-eQTL 3.94e-01 0.074 0.0866 0.388 NK_HLA L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 1.42e-01 -0.134 0.0906 0.388 NK_HLA L2
ENSG00000162607 USP1 962420 sc-eQTL 7.01e-01 -0.0366 0.0953 0.388 NK_HLA L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 2.23e-01 0.106 0.0864 0.388 NK_HLA L2
ENSG00000079739 PGM1 -194694 sc-eQTL 5.46e-01 0.0457 0.0755 0.384 NK_cytokine L2
ENSG00000088035 ALG6 31142 sc-eQTL 5.66e-01 0.049 0.0854 0.384 NK_cytokine L2
ENSG00000116641 DOCK7 710331 sc-eQTL 7.45e-01 0.0257 0.0791 0.384 NK_cytokine L2
ENSG00000125703 ATG4C 614585 sc-eQTL 2.13e-01 0.101 0.0807 0.384 NK_cytokine L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 9.68e-03 -0.215 0.0825 0.384 NK_cytokine L2
ENSG00000162607 USP1 962420 sc-eQTL 7.35e-01 0.0298 0.0881 0.384 NK_cytokine L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 8.67e-01 -0.015 0.0893 0.384 NK_cytokine L2
ENSG00000079739 PGM1 -194694 sc-eQTL 1.57e-01 -0.155 0.109 0.378 PB L2
ENSG00000088035 ALG6 31142 sc-eQTL 7.55e-01 0.0361 0.115 0.378 PB L2
ENSG00000116641 DOCK7 710331 sc-eQTL 4.00e-02 -0.252 0.121 0.378 PB L2
ENSG00000125703 ATG4C 614585 sc-eQTL 4.20e-01 0.0869 0.107 0.378 PB L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 1.31e-01 -0.162 0.106 0.378 PB L2
ENSG00000162607 USP1 962420 sc-eQTL 3.13e-01 0.108 0.107 0.378 PB L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 1.03e-01 -0.192 0.117 0.378 PB L2
ENSG00000079739 PGM1 -194694 sc-eQTL 4.47e-01 -0.0623 0.0819 0.383 Pro_T L2
ENSG00000088035 ALG6 31142 sc-eQTL 7.94e-01 0.0218 0.0834 0.383 Pro_T L2
ENSG00000116641 DOCK7 710331 sc-eQTL 2.25e-01 -0.101 0.0834 0.383 Pro_T L2
ENSG00000125703 ATG4C 614585 sc-eQTL 1.72e-01 -0.1 0.0729 0.383 Pro_T L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 6.95e-02 0.133 0.0729 0.383 Pro_T L2
ENSG00000162607 USP1 962420 sc-eQTL 5.76e-01 -0.0282 0.0505 0.383 Pro_T L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 4.30e-01 0.0674 0.0852 0.383 Pro_T L2
ENSG00000079739 PGM1 -194694 sc-eQTL 7.89e-01 -0.0232 0.0865 0.382 Treg L2
ENSG00000088035 ALG6 31142 sc-eQTL 1.15e-01 0.146 0.092 0.382 Treg L2
ENSG00000116641 DOCK7 710331 sc-eQTL 5.50e-01 0.0507 0.0849 0.382 Treg L2
ENSG00000125703 ATG4C 614585 sc-eQTL 2.29e-01 0.104 0.0865 0.382 Treg L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 3.16e-01 0.0911 0.0906 0.382 Treg L2
ENSG00000162607 USP1 962420 sc-eQTL 6.56e-01 0.0392 0.0878 0.382 Treg L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 5.40e-01 -0.0533 0.0868 0.382 Treg L2
ENSG00000079739 PGM1 -194694 sc-eQTL 9.45e-01 0.00601 0.0863 0.38 cDC L2
ENSG00000088035 ALG6 31142 sc-eQTL 8.38e-01 0.018 0.0875 0.38 cDC L2
ENSG00000116641 DOCK7 710331 sc-eQTL 9.86e-01 -0.00154 0.0858 0.38 cDC L2
ENSG00000125703 ATG4C 614585 sc-eQTL 8.59e-01 0.0133 0.0745 0.38 cDC L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 3.36e-01 -0.0909 0.0943 0.38 cDC L2
ENSG00000162607 USP1 962420 sc-eQTL 8.27e-01 -0.0184 0.0841 0.38 cDC L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 7.98e-01 -0.0195 0.0759 0.38 cDC L2
ENSG00000079739 PGM1 -194694 sc-eQTL 4.40e-01 0.0621 0.0803 0.382 cMono_IL1B L2
ENSG00000088035 ALG6 31142 sc-eQTL 7.81e-01 0.0224 0.0805 0.382 cMono_IL1B L2
ENSG00000116641 DOCK7 710331 sc-eQTL 7.99e-02 -0.148 0.0842 0.382 cMono_IL1B L2
ENSG00000125703 ATG4C 614585 sc-eQTL 4.22e-01 0.048 0.0596 0.382 cMono_IL1B L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 8.71e-04 -0.278 0.0823 0.382 cMono_IL1B L2
ENSG00000162607 USP1 962420 sc-eQTL 6.43e-01 0.0346 0.0745 0.382 cMono_IL1B L2
ENSG00000079739 PGM1 -194694 sc-eQTL 9.10e-01 -0.0102 0.0898 0.382 cMono_S100A L2
ENSG00000088035 ALG6 31142 sc-eQTL 8.26e-01 -0.0201 0.091 0.382 cMono_S100A L2
ENSG00000116641 DOCK7 710331 sc-eQTL 8.39e-01 0.0172 0.0844 0.382 cMono_S100A L2
ENSG00000125703 ATG4C 614585 sc-eQTL 1.25e-01 0.112 0.0726 0.382 cMono_S100A L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 5.05e-01 -0.055 0.0823 0.382 cMono_S100A L2
ENSG00000162607 USP1 962420 sc-eQTL 7.91e-02 -0.149 0.0842 0.382 cMono_S100A L2
ENSG00000079739 PGM1 -194694 sc-eQTL 9.55e-01 -0.00549 0.0963 0.4 gdT L2
ENSG00000088035 ALG6 31142 sc-eQTL 7.05e-01 -0.0389 0.103 0.4 gdT L2
ENSG00000116641 DOCK7 710331 sc-eQTL 9.44e-02 0.168 0.0997 0.4 gdT L2
ENSG00000125703 ATG4C 614585 sc-eQTL 7.62e-01 0.0292 0.0962 0.4 gdT L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 3.52e-01 -0.0951 0.102 0.4 gdT L2
ENSG00000162607 USP1 962420 sc-eQTL 2.46e-01 -0.112 0.0962 0.4 gdT L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 6.65e-01 0.0436 0.1 0.4 gdT L2
ENSG00000079739 PGM1 -194694 sc-eQTL 8.23e-02 0.158 0.0902 0.378 intMono L2
ENSG00000088035 ALG6 31142 sc-eQTL 2.68e-01 0.0937 0.0844 0.378 intMono L2
ENSG00000116641 DOCK7 710331 sc-eQTL 7.28e-01 -0.0301 0.0865 0.378 intMono L2
ENSG00000125703 ATG4C 614585 sc-eQTL 1.51e-01 0.118 0.0821 0.378 intMono L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 4.12e-03 -0.259 0.0891 0.378 intMono L2
ENSG00000162607 USP1 962420 sc-eQTL 8.87e-01 -0.0132 0.0925 0.378 intMono L2
ENSG00000079739 PGM1 -194694 sc-eQTL 7.58e-01 0.0249 0.0807 0.382 ncMono L2
ENSG00000088035 ALG6 31142 sc-eQTL 2.66e-01 -0.0986 0.0884 0.382 ncMono L2
ENSG00000116641 DOCK7 710331 sc-eQTL 1.86e-01 -0.115 0.0869 0.382 ncMono L2
ENSG00000125703 ATG4C 614585 sc-eQTL 4.71e-01 -0.0589 0.0814 0.382 ncMono L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 8.19e-02 -0.148 0.0846 0.382 ncMono L2
ENSG00000162607 USP1 962420 sc-eQTL 6.32e-01 0.0418 0.0871 0.382 ncMono L2
ENSG00000079739 PGM1 -194694 sc-eQTL 7.31e-01 0.0336 0.0975 0.379 pDC L2
ENSG00000088035 ALG6 31142 sc-eQTL 1.27e-01 0.145 0.0943 0.379 pDC L2
ENSG00000116641 DOCK7 710331 sc-eQTL 7.41e-02 -0.173 0.0961 0.379 pDC L2
ENSG00000125703 ATG4C 614585 sc-eQTL 9.17e-01 0.00906 0.0871 0.379 pDC L2
ENSG00000142856 ITGB3BP -195004 sc-eQTL 5.08e-01 -0.0647 0.0976 0.379 pDC L2
ENSG00000162607 USP1 962420 sc-eQTL 1.67e-01 0.137 0.099 0.379 pDC L2
ENSG00000203965 EFCAB7 -124655 sc-eQTL 9.09e-01 -0.00988 0.0865 0.379 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -194694 sc-eQTL 3.64e-01 0.0759 0.0834 0.382 B_Memory LOneK1K
ENSG00000088035 ALG6 31142 sc-eQTL 8.09e-01 -0.0223 0.0924 0.382 B_Memory LOneK1K
ENSG00000116641 DOCK7 710331 sc-eQTL 4.87e-01 -0.0557 0.0801 0.382 B_Memory LOneK1K
ENSG00000125703 ATG4C 614585 sc-eQTL 1.40e-01 0.0956 0.0645 0.382 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -195004 sc-eQTL 7.17e-03 -0.227 0.0837 0.382 B_Memory LOneK1K
ENSG00000162607 USP1 962420 sc-eQTL 2.73e-01 -0.0906 0.0825 0.382 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -124655 sc-eQTL 7.42e-06 -0.389 0.0846 0.382 B_Memory LOneK1K
ENSG00000079739 PGM1 -194694 sc-eQTL 1.73e-01 0.12 0.0878 0.382 B_Naive LOneK1K
ENSG00000088035 ALG6 31142 sc-eQTL 5.08e-01 0.0602 0.0908 0.382 B_Naive LOneK1K
ENSG00000116641 DOCK7 710331 sc-eQTL 7.96e-01 -0.022 0.0848 0.382 B_Naive LOneK1K
ENSG00000125703 ATG4C 614585 sc-eQTL 8.42e-01 -0.013 0.0647 0.382 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -195004 sc-eQTL 2.07e-06 -0.424 0.0868 0.382 B_Naive LOneK1K
ENSG00000162607 USP1 962420 sc-eQTL 8.61e-02 0.135 0.0781 0.382 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -124655 sc-eQTL 6.33e-02 -0.17 0.0912 0.382 B_Naive LOneK1K
ENSG00000079739 PGM1 -194694 sc-eQTL 8.28e-01 0.0179 0.0822 0.382 CD14_Mono LOneK1K
ENSG00000088035 ALG6 31142 sc-eQTL 9.66e-01 0.0034 0.0796 0.382 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 710331 sc-eQTL 1.09e-01 -0.128 0.0797 0.382 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 614585 sc-eQTL 9.02e-02 0.0937 0.0551 0.382 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -195004 sc-eQTL 9.05e-03 -0.213 0.0807 0.382 CD14_Mono LOneK1K
ENSG00000162607 USP1 962420 sc-eQTL 2.82e-01 -0.0753 0.0699 0.382 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -194694 sc-eQTL 8.24e-02 0.136 0.0778 0.381 CD16_Mono LOneK1K
ENSG00000088035 ALG6 31142 sc-eQTL 6.10e-01 0.0454 0.0889 0.381 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 710331 sc-eQTL 3.13e-01 -0.0889 0.0878 0.381 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 614585 sc-eQTL 6.00e-01 -0.0394 0.075 0.381 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -195004 sc-eQTL 1.66e-03 -0.271 0.0851 0.381 CD16_Mono LOneK1K
ENSG00000162607 USP1 962420 sc-eQTL 4.94e-01 0.056 0.0818 0.381 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -194694 sc-eQTL 7.77e-01 0.0191 0.0672 0.384 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 31142 sc-eQTL 7.31e-02 0.144 0.0801 0.384 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 710331 sc-eQTL 7.84e-01 0.0199 0.0723 0.384 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 614585 sc-eQTL 9.10e-01 0.00818 0.0721 0.384 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -195004 sc-eQTL 3.64e-03 -0.246 0.0838 0.384 NK_CD56dim LOneK1K
ENSG00000162607 USP1 962420 sc-eQTL 5.32e-01 0.0485 0.0775 0.384 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -124655 sc-eQTL 9.84e-01 -0.00184 0.0944 0.384 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -194694 eQTL 9.03e-12 0.126 0.0182 0.0 0.0 0.368
ENSG00000088035 ALG6 31142 eQTL 0.000953 0.0457 0.0138 0.0 0.0 0.368
ENSG00000116652 DLEU2L -148365 eQTL 0.00832 -0.0714 0.027 0.00126 0.0 0.368
ENSG00000185483 ROR1 -375300 pQTL 0.0213 0.0321 0.0139 0.0 0.0 0.364
ENSG00000203965 EFCAB7 -124655 eQTL 7.08e-05 -0.0994 0.0249 0.0 0.0 0.368
ENSG00000230798 FOXD3-AS1 74276 eQTL 0.0262 0.0605 0.0272 0.0 0.0 0.368

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -194694 1.88e-06 2.37e-06 3.32e-07 1.53e-06 4.58e-07 8.22e-07 1.31e-06 6.28e-07 1.68e-06 8.34e-07 1.83e-06 1.48e-06 3.07e-06 8.94e-07 5.75e-07 1.19e-06 1.06e-06 1.55e-06 7.09e-07 1.07e-06 9.06e-07 2.24e-06 1.78e-06 9.56e-07 2.62e-06 1.2e-06 1.2e-06 1.34e-06 1.73e-06 1.66e-06 8.36e-07 3.05e-07 5.28e-07 1.1e-06 9.46e-07 8.7e-07 7.42e-07 4.29e-07 9.25e-07 3.32e-07 1.52e-07 2.77e-06 4.24e-07 2.07e-07 3.22e-07 3.08e-07 6.76e-07 2.29e-07 1.9e-07
ENSG00000088035 ALG6 31142 1.2e-05 1.29e-05 2.53e-06 8.21e-06 2.7e-06 6.2e-06 1.76e-05 2.58e-06 1.35e-05 6.78e-06 1.75e-05 6.83e-06 2.38e-05 5.19e-06 4.35e-06 8.95e-06 7.72e-06 1.19e-05 4.15e-06 4.22e-06 7.19e-06 1.26e-05 1.32e-05 5.03e-06 2.32e-05 5.12e-06 7.57e-06 5.64e-06 1.54e-05 1.58e-05 8.75e-06 1.2e-06 1.67e-06 4.69e-06 6.33e-06 3.89e-06 1.97e-06 2.61e-06 3.25e-06 2.23e-06 1.64e-06 1.69e-05 2.15e-06 3.6e-07 1.84e-06 2.45e-06 2.51e-06 1.23e-06 9.94e-07