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Genes within 1Mb (chr1:63381385:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -212026 sc-eQTL 2.38e-01 0.0858 0.0724 0.421 B L1
ENSG00000088035 ALG6 13810 sc-eQTL 4.92e-01 0.0518 0.0752 0.421 B L1
ENSG00000116641 DOCK7 692999 sc-eQTL 2.54e-01 -0.0859 0.0751 0.421 B L1
ENSG00000125703 ATG4C 597253 sc-eQTL 5.72e-01 -0.0296 0.0523 0.421 B L1
ENSG00000142856 ITGB3BP -212336 sc-eQTL 9.55e-08 -0.43 0.0778 0.421 B L1
ENSG00000162607 USP1 945088 sc-eQTL 5.73e-01 0.0407 0.0722 0.421 B L1
ENSG00000203965 EFCAB7 -141987 sc-eQTL 1.46e-04 -0.319 0.0824 0.421 B L1
ENSG00000079739 PGM1 -212026 sc-eQTL 2.91e-01 0.066 0.0624 0.421 CD4T L1
ENSG00000088035 ALG6 13810 sc-eQTL 2.70e-01 0.0761 0.0688 0.421 CD4T L1
ENSG00000116641 DOCK7 692999 sc-eQTL 5.72e-01 -0.0396 0.0698 0.421 CD4T L1
ENSG00000125703 ATG4C 597253 sc-eQTL 7.96e-01 0.0146 0.0564 0.421 CD4T L1
ENSG00000142856 ITGB3BP -212336 sc-eQTL 2.96e-08 -0.429 0.0744 0.421 CD4T L1
ENSG00000162607 USP1 945088 sc-eQTL 2.27e-01 -0.066 0.0545 0.421 CD4T L1
ENSG00000203965 EFCAB7 -141987 sc-eQTL 2.01e-03 -0.22 0.0703 0.421 CD4T L1
ENSG00000079739 PGM1 -212026 sc-eQTL 8.38e-01 0.0141 0.0692 0.421 CD8T L1
ENSG00000088035 ALG6 13810 sc-eQTL 7.51e-01 -0.0243 0.0763 0.421 CD8T L1
ENSG00000116641 DOCK7 692999 sc-eQTL 5.77e-01 -0.0432 0.0773 0.421 CD8T L1
ENSG00000125703 ATG4C 597253 sc-eQTL 7.13e-01 0.027 0.0734 0.421 CD8T L1
ENSG00000142856 ITGB3BP -212336 sc-eQTL 2.48e-09 -0.47 0.0755 0.421 CD8T L1
ENSG00000162607 USP1 945088 sc-eQTL 8.30e-01 0.0137 0.064 0.421 CD8T L1
ENSG00000203965 EFCAB7 -141987 sc-eQTL 1.78e-04 -0.302 0.0792 0.421 CD8T L1
ENSG00000079739 PGM1 -212026 sc-eQTL 2.76e-01 0.0832 0.0762 0.421 DC L1
ENSG00000088035 ALG6 13810 sc-eQTL 1.60e-01 0.111 0.0784 0.421 DC L1
ENSG00000116641 DOCK7 692999 sc-eQTL 8.93e-01 0.0108 0.0808 0.421 DC L1
ENSG00000125703 ATG4C 597253 sc-eQTL 8.25e-01 -0.014 0.0632 0.421 DC L1
ENSG00000142856 ITGB3BP -212336 sc-eQTL 4.51e-01 -0.0667 0.0882 0.421 DC L1
ENSG00000162607 USP1 945088 sc-eQTL 1.92e-01 0.1 0.0768 0.421 DC L1
ENSG00000203965 EFCAB7 -141987 sc-eQTL 1.69e-01 -0.106 0.0766 0.421 DC L1
ENSG00000079739 PGM1 -212026 sc-eQTL 5.10e-01 0.0493 0.0747 0.421 Mono L1
ENSG00000088035 ALG6 13810 sc-eQTL 4.32e-01 0.0614 0.0779 0.421 Mono L1
ENSG00000116641 DOCK7 692999 sc-eQTL 1.29e-01 -0.115 0.0751 0.421 Mono L1
ENSG00000125703 ATG4C 597253 sc-eQTL 5.31e-01 0.032 0.051 0.421 Mono L1
ENSG00000142856 ITGB3BP -212336 sc-eQTL 3.09e-04 -0.287 0.0782 0.421 Mono L1
ENSG00000162607 USP1 945088 sc-eQTL 9.09e-01 -0.00759 0.0662 0.421 Mono L1
ENSG00000079739 PGM1 -212026 sc-eQTL 6.11e-01 0.0324 0.0637 0.421 NK L1
ENSG00000088035 ALG6 13810 sc-eQTL 9.04e-02 0.126 0.0743 0.421 NK L1
ENSG00000116641 DOCK7 692999 sc-eQTL 6.04e-01 0.0319 0.0615 0.421 NK L1
ENSG00000125703 ATG4C 597253 sc-eQTL 8.16e-01 -0.0154 0.0661 0.421 NK L1
ENSG00000142856 ITGB3BP -212336 sc-eQTL 5.99e-04 -0.279 0.0799 0.421 NK L1
ENSG00000162607 USP1 945088 sc-eQTL 7.31e-01 0.0253 0.0734 0.421 NK L1
ENSG00000203965 EFCAB7 -141987 sc-eQTL 3.06e-01 -0.0914 0.089 0.421 NK L1
ENSG00000079739 PGM1 -212026 sc-eQTL 3.25e-01 -0.0717 0.0728 0.421 Other_T L1
ENSG00000088035 ALG6 13810 sc-eQTL 9.59e-01 -0.00379 0.0733 0.421 Other_T L1
ENSG00000116641 DOCK7 692999 sc-eQTL 7.37e-01 0.0251 0.0748 0.421 Other_T L1
ENSG00000125703 ATG4C 597253 sc-eQTL 1.39e-02 0.158 0.0638 0.421 Other_T L1
ENSG00000142856 ITGB3BP -212336 sc-eQTL 2.56e-02 -0.128 0.0567 0.421 Other_T L1
ENSG00000162607 USP1 945088 sc-eQTL 4.99e-01 -0.0337 0.0497 0.421 Other_T L1
ENSG00000203965 EFCAB7 -141987 sc-eQTL 3.66e-01 -0.0801 0.0884 0.421 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -212026 sc-eQTL 3.59e-01 0.0905 0.0984 0.418 B_Activated L2
ENSG00000088035 ALG6 13810 sc-eQTL 2.28e-01 0.114 0.0941 0.418 B_Activated L2
ENSG00000116641 DOCK7 692999 sc-eQTL 2.44e-01 0.102 0.0876 0.418 B_Activated L2
ENSG00000125703 ATG4C 597253 sc-eQTL 6.54e-01 0.0415 0.0925 0.418 B_Activated L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 8.25e-02 -0.156 0.0896 0.418 B_Activated L2
ENSG00000162607 USP1 945088 sc-eQTL 5.92e-01 -0.0526 0.0979 0.418 B_Activated L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 3.61e-01 -0.0781 0.0854 0.418 B_Activated L2
ENSG00000079739 PGM1 -212026 sc-eQTL 3.17e-01 0.0854 0.0852 0.421 B_Intermediate L2
ENSG00000088035 ALG6 13810 sc-eQTL 3.57e-01 -0.0799 0.0866 0.421 B_Intermediate L2
ENSG00000116641 DOCK7 692999 sc-eQTL 7.13e-01 0.0306 0.0829 0.421 B_Intermediate L2
ENSG00000125703 ATG4C 597253 sc-eQTL 2.38e-02 0.158 0.0693 0.421 B_Intermediate L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 4.48e-03 -0.236 0.082 0.421 B_Intermediate L2
ENSG00000162607 USP1 945088 sc-eQTL 7.05e-01 -0.0316 0.0834 0.421 B_Intermediate L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 3.85e-03 -0.237 0.0812 0.421 B_Intermediate L2
ENSG00000079739 PGM1 -212026 sc-eQTL 7.39e-01 -0.0282 0.0844 0.42 B_Memory L2
ENSG00000088035 ALG6 13810 sc-eQTL 6.21e-01 0.0424 0.0858 0.42 B_Memory L2
ENSG00000116641 DOCK7 692999 sc-eQTL 8.95e-02 -0.136 0.0799 0.42 B_Memory L2
ENSG00000125703 ATG4C 597253 sc-eQTL 7.39e-01 -0.0255 0.0765 0.42 B_Memory L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 6.77e-02 -0.159 0.0868 0.42 B_Memory L2
ENSG00000162607 USP1 945088 sc-eQTL 1.86e-01 -0.117 0.0879 0.42 B_Memory L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 3.19e-02 -0.186 0.0859 0.42 B_Memory L2
ENSG00000079739 PGM1 -212026 sc-eQTL 1.74e-01 0.117 0.0857 0.421 B_Naive1 L2
ENSG00000088035 ALG6 13810 sc-eQTL 8.51e-01 0.0162 0.0864 0.421 B_Naive1 L2
ENSG00000116641 DOCK7 692999 sc-eQTL 9.64e-01 -0.00378 0.0828 0.421 B_Naive1 L2
ENSG00000125703 ATG4C 597253 sc-eQTL 8.39e-01 -0.013 0.0637 0.421 B_Naive1 L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 7.13e-06 -0.371 0.0806 0.421 B_Naive1 L2
ENSG00000162607 USP1 945088 sc-eQTL 4.11e-01 0.0612 0.0742 0.421 B_Naive1 L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 4.10e-03 -0.257 0.0885 0.421 B_Naive1 L2
ENSG00000079739 PGM1 -212026 sc-eQTL 6.07e-01 0.0438 0.085 0.421 B_Naive2 L2
ENSG00000088035 ALG6 13810 sc-eQTL 5.46e-01 0.0536 0.0886 0.421 B_Naive2 L2
ENSG00000116641 DOCK7 692999 sc-eQTL 9.86e-01 0.0015 0.0853 0.421 B_Naive2 L2
ENSG00000125703 ATG4C 597253 sc-eQTL 2.86e-01 -0.0875 0.0819 0.421 B_Naive2 L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 1.07e-05 -0.383 0.085 0.421 B_Naive2 L2
ENSG00000162607 USP1 945088 sc-eQTL 5.93e-01 0.0453 0.0847 0.421 B_Naive2 L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 2.39e-01 0.104 0.0883 0.421 B_Naive2 L2
ENSG00000079739 PGM1 -212026 sc-eQTL 8.30e-01 -0.0184 0.0856 0.418 CD4_CTL L2
ENSG00000088035 ALG6 13810 sc-eQTL 7.83e-01 -0.025 0.0905 0.418 CD4_CTL L2
ENSG00000116641 DOCK7 692999 sc-eQTL 3.76e-01 0.0701 0.079 0.418 CD4_CTL L2
ENSG00000125703 ATG4C 597253 sc-eQTL 8.70e-01 0.0134 0.0819 0.418 CD4_CTL L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 6.31e-01 -0.0421 0.0875 0.418 CD4_CTL L2
ENSG00000162607 USP1 945088 sc-eQTL 8.01e-01 -0.0211 0.0833 0.418 CD4_CTL L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 8.22e-01 0.0187 0.0832 0.418 CD4_CTL L2
ENSG00000079739 PGM1 -212026 sc-eQTL 2.29e-01 0.0841 0.0697 0.421 CD4_Naive L2
ENSG00000088035 ALG6 13810 sc-eQTL 3.83e-01 0.0664 0.0759 0.421 CD4_Naive L2
ENSG00000116641 DOCK7 692999 sc-eQTL 8.18e-01 -0.0172 0.0747 0.421 CD4_Naive L2
ENSG00000125703 ATG4C 597253 sc-eQTL 6.84e-01 0.0269 0.066 0.421 CD4_Naive L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 2.47e-07 -0.404 0.0758 0.421 CD4_Naive L2
ENSG00000162607 USP1 945088 sc-eQTL 3.77e-01 -0.0545 0.0615 0.421 CD4_Naive L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 2.32e-02 -0.181 0.0792 0.421 CD4_Naive L2
ENSG00000079739 PGM1 -212026 sc-eQTL 9.96e-01 -0.000403 0.073 0.421 CD4_TCM L2
ENSG00000088035 ALG6 13810 sc-eQTL 8.67e-01 0.0142 0.0848 0.421 CD4_TCM L2
ENSG00000116641 DOCK7 692999 sc-eQTL 1.18e-01 -0.117 0.0747 0.421 CD4_TCM L2
ENSG00000125703 ATG4C 597253 sc-eQTL 2.10e-01 -0.0917 0.0729 0.421 CD4_TCM L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 7.25e-05 -0.336 0.083 0.421 CD4_TCM L2
ENSG00000162607 USP1 945088 sc-eQTL 1.84e-01 -0.0938 0.0704 0.421 CD4_TCM L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 1.51e-03 -0.262 0.0815 0.421 CD4_TCM L2
ENSG00000079739 PGM1 -212026 sc-eQTL 9.87e-03 0.22 0.0843 0.421 CD4_TEM L2
ENSG00000088035 ALG6 13810 sc-eQTL 6.88e-01 0.0346 0.0861 0.421 CD4_TEM L2
ENSG00000116641 DOCK7 692999 sc-eQTL 8.38e-01 0.0172 0.0839 0.421 CD4_TEM L2
ENSG00000125703 ATG4C 597253 sc-eQTL 4.42e-01 0.0628 0.0814 0.421 CD4_TEM L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 8.25e-03 -0.221 0.0828 0.421 CD4_TEM L2
ENSG00000162607 USP1 945088 sc-eQTL 6.84e-03 -0.214 0.0783 0.421 CD4_TEM L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 1.77e-01 -0.118 0.0868 0.421 CD4_TEM L2
ENSG00000079739 PGM1 -212026 sc-eQTL 6.52e-01 0.0354 0.0783 0.421 CD8_CTL L2
ENSG00000088035 ALG6 13810 sc-eQTL 3.92e-01 -0.0714 0.0831 0.421 CD8_CTL L2
ENSG00000116641 DOCK7 692999 sc-eQTL 3.08e-01 -0.0805 0.0788 0.421 CD8_CTL L2
ENSG00000125703 ATG4C 597253 sc-eQTL 9.68e-02 0.139 0.0836 0.421 CD8_CTL L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 3.28e-02 -0.186 0.0865 0.421 CD8_CTL L2
ENSG00000162607 USP1 945088 sc-eQTL 4.19e-01 0.0634 0.0782 0.421 CD8_CTL L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 1.47e-01 -0.13 0.0892 0.421 CD8_CTL L2
ENSG00000079739 PGM1 -212026 sc-eQTL 1.87e-01 0.105 0.0794 0.421 CD8_Naive L2
ENSG00000088035 ALG6 13810 sc-eQTL 6.83e-01 0.0338 0.0825 0.421 CD8_Naive L2
ENSG00000116641 DOCK7 692999 sc-eQTL 9.49e-01 -0.00547 0.0853 0.421 CD8_Naive L2
ENSG00000125703 ATG4C 597253 sc-eQTL 6.47e-01 -0.0375 0.0818 0.421 CD8_Naive L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 9.51e-08 -0.428 0.0775 0.421 CD8_Naive L2
ENSG00000162607 USP1 945088 sc-eQTL 1.70e-01 -0.096 0.0698 0.421 CD8_Naive L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 4.88e-02 -0.154 0.0774 0.421 CD8_Naive L2
ENSG00000079739 PGM1 -212026 sc-eQTL 9.33e-01 -0.0073 0.0862 0.424 CD8_TCM L2
ENSG00000088035 ALG6 13810 sc-eQTL 5.06e-01 -0.0581 0.0872 0.424 CD8_TCM L2
ENSG00000116641 DOCK7 692999 sc-eQTL 6.66e-01 -0.0368 0.0851 0.424 CD8_TCM L2
ENSG00000125703 ATG4C 597253 sc-eQTL 5.24e-01 -0.0556 0.087 0.424 CD8_TCM L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 1.14e-01 -0.134 0.0841 0.424 CD8_TCM L2
ENSG00000162607 USP1 945088 sc-eQTL 7.39e-01 -0.0272 0.0814 0.424 CD8_TCM L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 1.36e-01 -0.128 0.0858 0.424 CD8_TCM L2
ENSG00000079739 PGM1 -212026 sc-eQTL 1.54e-01 -0.126 0.0884 0.406 CD8_TEM L2
ENSG00000088035 ALG6 13810 sc-eQTL 7.63e-01 0.0269 0.0892 0.406 CD8_TEM L2
ENSG00000116641 DOCK7 692999 sc-eQTL 3.00e-01 -0.0896 0.0863 0.406 CD8_TEM L2
ENSG00000125703 ATG4C 597253 sc-eQTL 4.10e-02 0.169 0.0823 0.406 CD8_TEM L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 2.30e-02 -0.204 0.0888 0.406 CD8_TEM L2
ENSG00000162607 USP1 945088 sc-eQTL 4.06e-01 0.0714 0.0857 0.406 CD8_TEM L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 7.12e-02 -0.157 0.0866 0.406 CD8_TEM L2
ENSG00000079739 PGM1 -212026 sc-eQTL 5.75e-01 -0.0476 0.0848 0.42 MAIT L2
ENSG00000088035 ALG6 13810 sc-eQTL 5.03e-01 -0.0564 0.0839 0.42 MAIT L2
ENSG00000116641 DOCK7 692999 sc-eQTL 7.56e-01 0.025 0.0805 0.42 MAIT L2
ENSG00000125703 ATG4C 597253 sc-eQTL 6.39e-02 0.157 0.0842 0.42 MAIT L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 9.90e-03 -0.218 0.0837 0.42 MAIT L2
ENSG00000162607 USP1 945088 sc-eQTL 3.39e-01 -0.0808 0.0842 0.42 MAIT L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 9.90e-01 -0.00105 0.0876 0.42 MAIT L2
ENSG00000079739 PGM1 -212026 sc-eQTL 8.93e-01 0.0113 0.0844 0.42 NK_CD56bright L2
ENSG00000088035 ALG6 13810 sc-eQTL 9.01e-02 0.146 0.0859 0.42 NK_CD56bright L2
ENSG00000116641 DOCK7 692999 sc-eQTL 6.01e-01 0.0392 0.0749 0.42 NK_CD56bright L2
ENSG00000125703 ATG4C 597253 sc-eQTL 9.74e-01 -0.00278 0.0838 0.42 NK_CD56bright L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 5.94e-01 -0.0466 0.0871 0.42 NK_CD56bright L2
ENSG00000162607 USP1 945088 sc-eQTL 8.39e-01 -0.0183 0.0899 0.42 NK_CD56bright L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 8.22e-02 -0.149 0.0854 0.42 NK_CD56bright L2
ENSG00000079739 PGM1 -212026 sc-eQTL 8.38e-01 0.0135 0.0661 0.42 NK_CD56dim L2
ENSG00000088035 ALG6 13810 sc-eQTL 5.36e-01 0.052 0.0838 0.42 NK_CD56dim L2
ENSG00000116641 DOCK7 692999 sc-eQTL 7.69e-01 -0.0215 0.073 0.42 NK_CD56dim L2
ENSG00000125703 ATG4C 597253 sc-eQTL 2.66e-02 -0.164 0.0733 0.42 NK_CD56dim L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 1.63e-01 -0.118 0.084 0.42 NK_CD56dim L2
ENSG00000162607 USP1 945088 sc-eQTL 8.44e-01 0.0161 0.0818 0.42 NK_CD56dim L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 5.83e-01 -0.0501 0.0911 0.42 NK_CD56dim L2
ENSG00000079739 PGM1 -212026 sc-eQTL 9.28e-01 -0.00824 0.0908 0.425 NK_HLA L2
ENSG00000088035 ALG6 13810 sc-eQTL 3.39e-01 0.09 0.094 0.425 NK_HLA L2
ENSG00000116641 DOCK7 692999 sc-eQTL 6.18e-01 -0.0359 0.072 0.425 NK_HLA L2
ENSG00000125703 ATG4C 597253 sc-eQTL 7.72e-01 0.0243 0.0838 0.425 NK_HLA L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 9.35e-02 -0.147 0.0873 0.425 NK_HLA L2
ENSG00000162607 USP1 945088 sc-eQTL 7.13e-01 -0.0338 0.092 0.425 NK_HLA L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 3.87e-01 0.0726 0.0836 0.425 NK_HLA L2
ENSG00000079739 PGM1 -212026 sc-eQTL 3.25e-01 0.0716 0.0725 0.42 NK_cytokine L2
ENSG00000088035 ALG6 13810 sc-eQTL 8.34e-01 0.0172 0.0822 0.42 NK_cytokine L2
ENSG00000116641 DOCK7 692999 sc-eQTL 7.39e-01 0.0254 0.0761 0.42 NK_cytokine L2
ENSG00000125703 ATG4C 597253 sc-eQTL 1.18e-01 0.122 0.0774 0.42 NK_cytokine L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 2.29e-03 -0.244 0.0789 0.42 NK_cytokine L2
ENSG00000162607 USP1 945088 sc-eQTL 1.78e-01 0.114 0.0844 0.42 NK_cytokine L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 9.27e-01 0.00792 0.0859 0.42 NK_cytokine L2
ENSG00000079739 PGM1 -212026 sc-eQTL 2.66e-01 -0.12 0.107 0.415 PB L2
ENSG00000088035 ALG6 13810 sc-eQTL 7.65e-01 0.0338 0.113 0.415 PB L2
ENSG00000116641 DOCK7 692999 sc-eQTL 8.73e-02 -0.206 0.119 0.415 PB L2
ENSG00000125703 ATG4C 597253 sc-eQTL 7.25e-01 0.0371 0.105 0.415 PB L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 7.09e-02 -0.189 0.104 0.415 PB L2
ENSG00000162607 USP1 945088 sc-eQTL 5.64e-01 0.0604 0.104 0.415 PB L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 1.12e-01 -0.183 0.114 0.415 PB L2
ENSG00000079739 PGM1 -212026 sc-eQTL 3.81e-01 -0.0695 0.0792 0.42 Pro_T L2
ENSG00000088035 ALG6 13810 sc-eQTL 9.14e-01 0.00873 0.0808 0.42 Pro_T L2
ENSG00000116641 DOCK7 692999 sc-eQTL 2.38e-01 -0.0956 0.0808 0.42 Pro_T L2
ENSG00000125703 ATG4C 597253 sc-eQTL 3.05e-01 -0.0728 0.0708 0.42 Pro_T L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 1.44e-01 0.104 0.0708 0.42 Pro_T L2
ENSG00000162607 USP1 945088 sc-eQTL 3.70e-01 -0.0439 0.0488 0.42 Pro_T L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 7.58e-01 0.0255 0.0827 0.42 Pro_T L2
ENSG00000079739 PGM1 -212026 sc-eQTL 7.76e-01 -0.0237 0.0833 0.421 Treg L2
ENSG00000088035 ALG6 13810 sc-eQTL 1.60e-01 0.125 0.0887 0.421 Treg L2
ENSG00000116641 DOCK7 692999 sc-eQTL 6.78e-01 0.034 0.0817 0.421 Treg L2
ENSG00000125703 ATG4C 597253 sc-eQTL 5.10e-01 0.0551 0.0835 0.421 Treg L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 6.92e-01 0.0347 0.0874 0.421 Treg L2
ENSG00000162607 USP1 945088 sc-eQTL 4.52e-01 0.0637 0.0845 0.421 Treg L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 7.58e-01 -0.0258 0.0836 0.421 Treg L2
ENSG00000079739 PGM1 -212026 sc-eQTL 8.73e-01 0.0132 0.0824 0.417 cDC L2
ENSG00000088035 ALG6 13810 sc-eQTL 7.11e-01 -0.031 0.0835 0.417 cDC L2
ENSG00000116641 DOCK7 692999 sc-eQTL 6.24e-01 0.0402 0.0819 0.417 cDC L2
ENSG00000125703 ATG4C 597253 sc-eQTL 7.45e-01 -0.0232 0.0712 0.417 cDC L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 3.72e-01 -0.0805 0.09 0.417 cDC L2
ENSG00000162607 USP1 945088 sc-eQTL 6.44e-01 -0.0371 0.0803 0.417 cDC L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 6.89e-01 -0.0291 0.0725 0.417 cDC L2
ENSG00000079739 PGM1 -212026 sc-eQTL 2.70e-01 0.0856 0.0774 0.421 cMono_IL1B L2
ENSG00000088035 ALG6 13810 sc-eQTL 5.32e-01 0.0486 0.0776 0.421 cMono_IL1B L2
ENSG00000116641 DOCK7 692999 sc-eQTL 6.64e-02 -0.15 0.0813 0.421 cMono_IL1B L2
ENSG00000125703 ATG4C 597253 sc-eQTL 9.20e-01 -0.00579 0.0576 0.421 cMono_IL1B L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 4.83e-05 -0.326 0.0785 0.421 cMono_IL1B L2
ENSG00000162607 USP1 945088 sc-eQTL 5.89e-01 0.0389 0.0719 0.421 cMono_IL1B L2
ENSG00000079739 PGM1 -212026 sc-eQTL 8.80e-01 0.0131 0.0865 0.421 cMono_S100A L2
ENSG00000088035 ALG6 13810 sc-eQTL 9.25e-01 -0.00821 0.0876 0.421 cMono_S100A L2
ENSG00000116641 DOCK7 692999 sc-eQTL 6.31e-01 0.039 0.0812 0.421 cMono_S100A L2
ENSG00000125703 ATG4C 597253 sc-eQTL 1.59e-01 0.099 0.07 0.421 cMono_S100A L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 3.46e-01 -0.0747 0.0792 0.421 cMono_S100A L2
ENSG00000162607 USP1 945088 sc-eQTL 6.28e-02 -0.152 0.081 0.421 cMono_S100A L2
ENSG00000079739 PGM1 -212026 sc-eQTL 7.45e-01 0.0304 0.0932 0.433 gdT L2
ENSG00000088035 ALG6 13810 sc-eQTL 9.55e-01 -0.00562 0.0994 0.433 gdT L2
ENSG00000116641 DOCK7 692999 sc-eQTL 1.58e-01 0.137 0.0968 0.433 gdT L2
ENSG00000125703 ATG4C 597253 sc-eQTL 3.23e-01 0.092 0.0928 0.433 gdT L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 1.53e-01 -0.141 0.0982 0.433 gdT L2
ENSG00000162607 USP1 945088 sc-eQTL 8.00e-01 -0.0237 0.0936 0.433 gdT L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 8.89e-01 0.0136 0.0973 0.433 gdT L2
ENSG00000079739 PGM1 -212026 sc-eQTL 4.30e-02 0.176 0.0865 0.418 intMono L2
ENSG00000088035 ALG6 13810 sc-eQTL 4.98e-01 0.0552 0.0813 0.418 intMono L2
ENSG00000116641 DOCK7 692999 sc-eQTL 9.10e-01 0.00939 0.0832 0.418 intMono L2
ENSG00000125703 ATG4C 597253 sc-eQTL 3.08e-01 0.0809 0.0792 0.418 intMono L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 3.45e-03 -0.253 0.0856 0.418 intMono L2
ENSG00000162607 USP1 945088 sc-eQTL 9.59e-01 -0.00453 0.0889 0.418 intMono L2
ENSG00000079739 PGM1 -212026 sc-eQTL 7.90e-01 0.0206 0.0773 0.421 ncMono L2
ENSG00000088035 ALG6 13810 sc-eQTL 2.48e-01 -0.098 0.0846 0.421 ncMono L2
ENSG00000116641 DOCK7 692999 sc-eQTL 1.86e-01 -0.11 0.0832 0.421 ncMono L2
ENSG00000125703 ATG4C 597253 sc-eQTL 3.86e-01 -0.0678 0.0779 0.421 ncMono L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 1.96e-01 -0.106 0.0813 0.421 ncMono L2
ENSG00000162607 USP1 945088 sc-eQTL 7.16e-01 0.0304 0.0834 0.421 ncMono L2
ENSG00000079739 PGM1 -212026 sc-eQTL 9.58e-01 -0.0049 0.0936 0.418 pDC L2
ENSG00000088035 ALG6 13810 sc-eQTL 2.89e-01 0.0967 0.0908 0.418 pDC L2
ENSG00000116641 DOCK7 692999 sc-eQTL 1.15e-01 -0.146 0.0923 0.418 pDC L2
ENSG00000125703 ATG4C 597253 sc-eQTL 6.44e-01 0.0386 0.0835 0.418 pDC L2
ENSG00000142856 ITGB3BP -212336 sc-eQTL 6.22e-01 -0.0463 0.0937 0.418 pDC L2
ENSG00000162607 USP1 945088 sc-eQTL 1.90e-01 0.125 0.095 0.418 pDC L2
ENSG00000203965 EFCAB7 -141987 sc-eQTL 5.95e-01 -0.0442 0.0829 0.418 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -212026 sc-eQTL 6.52e-01 0.0363 0.0804 0.421 B_Memory LOneK1K
ENSG00000088035 ALG6 13810 sc-eQTL 6.93e-01 -0.0352 0.0889 0.421 B_Memory LOneK1K
ENSG00000116641 DOCK7 692999 sc-eQTL 4.98e-01 -0.0523 0.0771 0.421 B_Memory LOneK1K
ENSG00000125703 ATG4C 597253 sc-eQTL 7.70e-02 0.11 0.062 0.421 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -212336 sc-eQTL 1.66e-03 -0.255 0.0801 0.421 B_Memory LOneK1K
ENSG00000162607 USP1 945088 sc-eQTL 4.95e-01 -0.0543 0.0795 0.421 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -141987 sc-eQTL 2.53e-05 -0.353 0.0819 0.421 B_Memory LOneK1K
ENSG00000079739 PGM1 -212026 sc-eQTL 1.62e-01 0.117 0.0837 0.421 B_Naive LOneK1K
ENSG00000088035 ALG6 13810 sc-eQTL 6.26e-01 0.0422 0.0865 0.421 B_Naive LOneK1K
ENSG00000116641 DOCK7 692999 sc-eQTL 7.58e-01 -0.0249 0.0808 0.421 B_Naive LOneK1K
ENSG00000125703 ATG4C 597253 sc-eQTL 2.42e-01 -0.0721 0.0615 0.421 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -212336 sc-eQTL 2.12e-07 -0.439 0.0818 0.421 B_Naive LOneK1K
ENSG00000162607 USP1 945088 sc-eQTL 1.69e-01 0.103 0.0746 0.421 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -141987 sc-eQTL 9.50e-02 -0.146 0.0871 0.421 B_Naive LOneK1K
ENSG00000079739 PGM1 -212026 sc-eQTL 5.57e-01 0.0467 0.0794 0.421 CD14_Mono LOneK1K
ENSG00000088035 ALG6 13810 sc-eQTL 6.76e-01 0.0322 0.0769 0.421 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 692999 sc-eQTL 1.29e-01 -0.117 0.077 0.421 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 597253 sc-eQTL 3.97e-01 0.0453 0.0534 0.421 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -212336 sc-eQTL 1.07e-03 -0.256 0.0772 0.421 CD14_Mono LOneK1K
ENSG00000162607 USP1 945088 sc-eQTL 3.70e-01 -0.0607 0.0675 0.421 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -212026 sc-eQTL 1.20e-01 0.117 0.075 0.42 CD16_Mono LOneK1K
ENSG00000088035 ALG6 13810 sc-eQTL 9.30e-01 0.00758 0.0857 0.42 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 692999 sc-eQTL 4.05e-01 -0.0707 0.0846 0.42 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 597253 sc-eQTL 3.91e-01 -0.062 0.0722 0.42 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -212336 sc-eQTL 4.42e-03 -0.237 0.0823 0.42 CD16_Mono LOneK1K
ENSG00000162607 USP1 945088 sc-eQTL 4.70e-01 0.057 0.0787 0.42 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -212026 sc-eQTL 7.04e-01 0.0247 0.0648 0.42 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 13810 sc-eQTL 2.92e-01 0.082 0.0776 0.42 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 692999 sc-eQTL 8.08e-01 0.017 0.0697 0.42 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 597253 sc-eQTL 9.15e-01 -0.00745 0.0696 0.42 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -212336 sc-eQTL 9.74e-04 -0.269 0.0803 0.42 NK_CD56dim LOneK1K
ENSG00000162607 USP1 945088 sc-eQTL 3.71e-01 0.0669 0.0747 0.42 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -141987 sc-eQTL 7.53e-01 -0.0287 0.091 0.42 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -212026 eQTL 1.59e-12 0.125 0.0175 0.0 0.0 0.422
ENSG00000088035 ALG6 13810 eQTL 1.2e-05 0.0582 0.0132 0.0 0.0 0.422
ENSG00000116641 DOCK7 693017 eQTL 0.0246 -0.05 0.0222 0.0 0.0 0.422
ENSG00000116652 DLEU2L -165697 eQTL 0.000951 -0.0861 0.026 0.00382 0.00329 0.422
ENSG00000185483 ROR1 -392632 pQTL 0.00442 0.0382 0.0134 0.00219 0.0 0.418
ENSG00000203965 EFCAB7 -141987 eQTL 3.50e-07 -0.122 0.0239 0.00538 0.00509 0.422
ENSG00000230798 FOXD3-AS1 56944 eQTL 0.048 0.0519 0.0262 0.0 0.0 0.422

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -212026 2.69e-06 2.53e-06 7.43e-07 2.01e-06 8.7e-07 7.92e-07 2.29e-06 9.52e-07 2.52e-06 1.61e-06 2.72e-06 1.95e-06 3.66e-06 1.4e-06 9.36e-07 2.06e-06 1.63e-06 2.1e-06 1.39e-06 1.05e-06 1.99e-06 3.54e-06 3.01e-06 1.8e-06 3.88e-06 1.3e-06 1.84e-06 1.81e-06 2.83e-06 2.17e-06 1.94e-06 5.26e-07 6.09e-07 1.74e-06 1.54e-06 8.53e-07 9.6e-07 4.73e-07 1.34e-06 3.82e-07 4.36e-07 3.37e-06 5.27e-07 1.93e-07 3.75e-07 3.51e-07 7.44e-07 4.25e-07 3.6e-07
ENSG00000088035 ALG6 13810 2.34e-05 2.8e-05 8.39e-06 1.78e-05 9.39e-06 1.82e-05 4.59e-05 6.99e-06 3.43e-05 1.74e-05 3.92e-05 1.87e-05 5.31e-05 1.54e-05 8.49e-06 2.49e-05 2.14e-05 2.91e-05 1.34e-05 9.06e-06 2.29e-05 3.68e-05 3.24e-05 1.45e-05 5.14e-05 1.33e-05 1.99e-05 1.47e-05 3.76e-05 3.56e-05 2.13e-05 3.79e-06 5.71e-06 1.24e-05 1.47e-05 9.22e-06 6.62e-06 5.61e-06 8.18e-06 5.12e-06 2.54e-06 3.54e-05 5.03e-06 1.24e-06 5.95e-06 6.69e-06 6.16e-06 3.62e-06 3.28e-06