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Genes within 1Mb (chr1:63371753:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -221658 sc-eQTL 2.90e-02 0.168 0.0766 0.538 B L1
ENSG00000088035 ALG6 4178 sc-eQTL 7.86e-01 -0.0218 0.0802 0.538 B L1
ENSG00000116641 DOCK7 683367 sc-eQTL 4.41e-01 -0.0618 0.0801 0.538 B L1
ENSG00000125703 ATG4C 587621 sc-eQTL 8.34e-01 -0.0117 0.0558 0.538 B L1
ENSG00000142856 ITGB3BP -221968 sc-eQTL 2.64e-06 -0.407 0.0842 0.538 B L1
ENSG00000162607 USP1 935456 sc-eQTL 2.21e-01 0.0942 0.0768 0.538 B L1
ENSG00000203965 EFCAB7 -151619 sc-eQTL 1.04e-02 -0.231 0.0895 0.538 B L1
ENSG00000079739 PGM1 -221658 sc-eQTL 9.17e-02 0.112 0.0664 0.538 CD4T L1
ENSG00000088035 ALG6 4178 sc-eQTL 8.73e-01 0.0118 0.0737 0.538 CD4T L1
ENSG00000116641 DOCK7 683367 sc-eQTL 5.59e-01 -0.0437 0.0746 0.538 CD4T L1
ENSG00000125703 ATG4C 587621 sc-eQTL 4.68e-01 0.0438 0.0602 0.538 CD4T L1
ENSG00000142856 ITGB3BP -221968 sc-eQTL 3.26e-10 -0.514 0.0779 0.538 CD4T L1
ENSG00000162607 USP1 935456 sc-eQTL 8.05e-02 -0.102 0.0581 0.538 CD4T L1
ENSG00000203965 EFCAB7 -151619 sc-eQTL 4.30e-02 -0.155 0.0761 0.538 CD4T L1
ENSG00000079739 PGM1 -221658 sc-eQTL 5.49e-01 0.0442 0.0736 0.538 CD8T L1
ENSG00000088035 ALG6 4178 sc-eQTL 6.41e-02 -0.15 0.0805 0.538 CD8T L1
ENSG00000116641 DOCK7 683367 sc-eQTL 3.96e-01 0.0698 0.0821 0.538 CD8T L1
ENSG00000125703 ATG4C 587621 sc-eQTL 8.89e-01 0.0109 0.0781 0.538 CD8T L1
ENSG00000142856 ITGB3BP -221968 sc-eQTL 3.03e-08 -0.468 0.0812 0.538 CD8T L1
ENSG00000162607 USP1 935456 sc-eQTL 9.51e-01 -0.0042 0.0681 0.538 CD8T L1
ENSG00000203965 EFCAB7 -151619 sc-eQTL 4.20e-05 -0.35 0.0837 0.538 CD8T L1
ENSG00000079739 PGM1 -221658 sc-eQTL 9.18e-01 -0.0085 0.0822 0.538 DC L1
ENSG00000088035 ALG6 4178 sc-eQTL 8.17e-01 0.0196 0.0848 0.538 DC L1
ENSG00000116641 DOCK7 683367 sc-eQTL 6.25e-01 0.0425 0.0869 0.538 DC L1
ENSG00000125703 ATG4C 587621 sc-eQTL 7.10e-01 0.0253 0.068 0.538 DC L1
ENSG00000142856 ITGB3BP -221968 sc-eQTL 9.98e-01 -0.000266 0.0951 0.538 DC L1
ENSG00000162607 USP1 935456 sc-eQTL 7.97e-01 0.0214 0.083 0.538 DC L1
ENSG00000203965 EFCAB7 -151619 sc-eQTL 2.46e-01 -0.0959 0.0825 0.538 DC L1
ENSG00000079739 PGM1 -221658 sc-eQTL 9.68e-01 0.00318 0.0803 0.538 Mono L1
ENSG00000088035 ALG6 4178 sc-eQTL 1.96e-01 0.108 0.0834 0.538 Mono L1
ENSG00000116641 DOCK7 683367 sc-eQTL 4.07e-01 -0.0672 0.0809 0.538 Mono L1
ENSG00000125703 ATG4C 587621 sc-eQTL 4.72e-01 0.0394 0.0547 0.538 Mono L1
ENSG00000142856 ITGB3BP -221968 sc-eQTL 3.43e-06 -0.392 0.0822 0.538 Mono L1
ENSG00000162607 USP1 935456 sc-eQTL 3.28e-01 -0.0694 0.0709 0.538 Mono L1
ENSG00000079739 PGM1 -221658 sc-eQTL 2.21e-01 0.0837 0.0681 0.536 NK L1
ENSG00000088035 ALG6 4178 sc-eQTL 9.32e-01 -0.00684 0.0801 0.536 NK L1
ENSG00000116641 DOCK7 683367 sc-eQTL 2.21e-01 0.0806 0.0658 0.536 NK L1
ENSG00000125703 ATG4C 587621 sc-eQTL 2.46e-01 0.0821 0.0706 0.536 NK L1
ENSG00000142856 ITGB3BP -221968 sc-eQTL 1.11e-03 -0.284 0.0859 0.536 NK L1
ENSG00000162607 USP1 935456 sc-eQTL 8.08e-01 -0.0191 0.0787 0.536 NK L1
ENSG00000203965 EFCAB7 -151619 sc-eQTL 1.00e-01 -0.157 0.095 0.536 NK L1
ENSG00000079739 PGM1 -221658 sc-eQTL 7.29e-01 -0.0269 0.0776 0.538 Other_T L1
ENSG00000088035 ALG6 4178 sc-eQTL 4.08e-01 -0.0645 0.0778 0.538 Other_T L1
ENSG00000116641 DOCK7 683367 sc-eQTL 2.75e-01 0.0869 0.0794 0.538 Other_T L1
ENSG00000125703 ATG4C 587621 sc-eQTL 4.01e-02 0.141 0.0682 0.538 Other_T L1
ENSG00000142856 ITGB3BP -221968 sc-eQTL 1.88e-02 -0.143 0.0603 0.538 Other_T L1
ENSG00000162607 USP1 935456 sc-eQTL 7.93e-01 -0.0139 0.053 0.538 Other_T L1
ENSG00000203965 EFCAB7 -151619 sc-eQTL 2.96e-01 -0.0985 0.094 0.538 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -221658 sc-eQTL 1.87e-01 0.135 0.102 0.543 B_Activated L2
ENSG00000088035 ALG6 4178 sc-eQTL 3.06e-02 0.212 0.097 0.543 B_Activated L2
ENSG00000116641 DOCK7 683367 sc-eQTL 8.22e-01 0.0207 0.0916 0.543 B_Activated L2
ENSG00000125703 ATG4C 587621 sc-eQTL 6.20e-01 0.0478 0.0962 0.543 B_Activated L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 1.32e-03 -0.298 0.0913 0.543 B_Activated L2
ENSG00000162607 USP1 935456 sc-eQTL 6.87e-01 -0.0412 0.102 0.543 B_Activated L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 1.63e-02 -0.212 0.0876 0.543 B_Activated L2
ENSG00000079739 PGM1 -221658 sc-eQTL 1.13e-01 0.146 0.0916 0.536 B_Intermediate L2
ENSG00000088035 ALG6 4178 sc-eQTL 2.98e-02 -0.202 0.0925 0.536 B_Intermediate L2
ENSG00000116641 DOCK7 683367 sc-eQTL 9.21e-01 0.00888 0.0894 0.536 B_Intermediate L2
ENSG00000125703 ATG4C 587621 sc-eQTL 5.37e-02 0.145 0.075 0.536 B_Intermediate L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 4.90e-03 -0.251 0.0884 0.536 B_Intermediate L2
ENSG00000162607 USP1 935456 sc-eQTL 6.26e-01 0.0439 0.0899 0.536 B_Intermediate L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 3.73e-03 -0.257 0.0875 0.536 B_Intermediate L2
ENSG00000079739 PGM1 -221658 sc-eQTL 4.52e-01 0.0688 0.0914 0.539 B_Memory L2
ENSG00000088035 ALG6 4178 sc-eQTL 6.00e-01 0.0488 0.0929 0.539 B_Memory L2
ENSG00000116641 DOCK7 683367 sc-eQTL 2.03e-01 -0.111 0.0869 0.539 B_Memory L2
ENSG00000125703 ATG4C 587621 sc-eQTL 2.80e-01 -0.0896 0.0827 0.539 B_Memory L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 8.33e-02 -0.164 0.0942 0.539 B_Memory L2
ENSG00000162607 USP1 935456 sc-eQTL 4.75e-01 -0.0684 0.0956 0.539 B_Memory L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 9.35e-02 -0.158 0.0935 0.539 B_Memory L2
ENSG00000079739 PGM1 -221658 sc-eQTL 3.61e-02 0.191 0.0903 0.538 B_Naive1 L2
ENSG00000088035 ALG6 4178 sc-eQTL 5.87e-01 -0.0498 0.0916 0.538 B_Naive1 L2
ENSG00000116641 DOCK7 683367 sc-eQTL 7.91e-01 -0.0233 0.0878 0.538 B_Naive1 L2
ENSG00000125703 ATG4C 587621 sc-eQTL 7.45e-01 0.022 0.0676 0.538 B_Naive1 L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 7.76e-04 -0.298 0.0873 0.538 B_Naive1 L2
ENSG00000162607 USP1 935456 sc-eQTL 7.49e-01 0.0253 0.0789 0.538 B_Naive1 L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 2.13e-01 -0.119 0.0954 0.538 B_Naive1 L2
ENSG00000079739 PGM1 -221658 sc-eQTL 2.79e-01 0.0976 0.0899 0.539 B_Naive2 L2
ENSG00000088035 ALG6 4178 sc-eQTL 1.51e-01 0.135 0.0935 0.539 B_Naive2 L2
ENSG00000116641 DOCK7 683367 sc-eQTL 6.11e-01 -0.046 0.0903 0.539 B_Naive2 L2
ENSG00000125703 ATG4C 587621 sc-eQTL 8.06e-02 -0.152 0.0863 0.539 B_Naive2 L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 5.73e-06 -0.418 0.0898 0.539 B_Naive2 L2
ENSG00000162607 USP1 935456 sc-eQTL 1.69e-01 0.123 0.0894 0.539 B_Naive2 L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 4.20e-01 0.0757 0.0937 0.539 B_Naive2 L2
ENSG00000079739 PGM1 -221658 sc-eQTL 6.79e-01 0.0378 0.0911 0.534 CD4_CTL L2
ENSG00000088035 ALG6 4178 sc-eQTL 8.42e-01 0.0192 0.0963 0.534 CD4_CTL L2
ENSG00000116641 DOCK7 683367 sc-eQTL 5.49e-01 0.0505 0.0841 0.534 CD4_CTL L2
ENSG00000125703 ATG4C 587621 sc-eQTL 9.90e-02 0.143 0.0865 0.534 CD4_CTL L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 5.86e-01 -0.0508 0.0931 0.534 CD4_CTL L2
ENSG00000162607 USP1 935456 sc-eQTL 6.79e-01 -0.0367 0.0887 0.534 CD4_CTL L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 8.21e-01 0.0201 0.0885 0.534 CD4_CTL L2
ENSG00000079739 PGM1 -221658 sc-eQTL 1.78e-01 0.1 0.0743 0.538 CD4_Naive L2
ENSG00000088035 ALG6 4178 sc-eQTL 8.80e-01 -0.0122 0.081 0.538 CD4_Naive L2
ENSG00000116641 DOCK7 683367 sc-eQTL 6.29e-01 -0.0385 0.0796 0.538 CD4_Naive L2
ENSG00000125703 ATG4C 587621 sc-eQTL 7.30e-01 0.0243 0.0704 0.538 CD4_Naive L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 1.07e-09 -0.503 0.0787 0.538 CD4_Naive L2
ENSG00000162607 USP1 935456 sc-eQTL 3.51e-01 -0.0613 0.0656 0.538 CD4_Naive L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 1.94e-01 -0.111 0.0851 0.538 CD4_Naive L2
ENSG00000079739 PGM1 -221658 sc-eQTL 8.95e-01 0.0103 0.0781 0.538 CD4_TCM L2
ENSG00000088035 ALG6 4178 sc-eQTL 6.79e-01 0.0376 0.0906 0.538 CD4_TCM L2
ENSG00000116641 DOCK7 683367 sc-eQTL 1.31e-01 -0.121 0.0799 0.538 CD4_TCM L2
ENSG00000125703 ATG4C 587621 sc-eQTL 1.68e-01 -0.108 0.0779 0.538 CD4_TCM L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 1.15e-05 -0.396 0.0881 0.538 CD4_TCM L2
ENSG00000162607 USP1 935456 sc-eQTL 7.75e-02 -0.133 0.0751 0.538 CD4_TCM L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 7.31e-03 -0.238 0.0877 0.538 CD4_TCM L2
ENSG00000079739 PGM1 -221658 sc-eQTL 3.29e-02 0.195 0.0906 0.538 CD4_TEM L2
ENSG00000088035 ALG6 4178 sc-eQTL 4.89e-01 0.0637 0.092 0.538 CD4_TEM L2
ENSG00000116641 DOCK7 683367 sc-eQTL 8.99e-01 -0.0115 0.0897 0.538 CD4_TEM L2
ENSG00000125703 ATG4C 587621 sc-eQTL 1.49e-01 0.126 0.0867 0.538 CD4_TEM L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 1.94e-02 -0.209 0.0888 0.538 CD4_TEM L2
ENSG00000162607 USP1 935456 sc-eQTL 1.34e-01 -0.128 0.0848 0.538 CD4_TEM L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 5.54e-01 -0.0552 0.0931 0.538 CD4_TEM L2
ENSG00000079739 PGM1 -221658 sc-eQTL 9.59e-01 0.00432 0.0838 0.538 CD8_CTL L2
ENSG00000088035 ALG6 4178 sc-eQTL 2.83e-02 -0.194 0.0881 0.538 CD8_CTL L2
ENSG00000116641 DOCK7 683367 sc-eQTL 7.81e-01 0.0235 0.0845 0.538 CD8_CTL L2
ENSG00000125703 ATG4C 587621 sc-eQTL 2.91e-02 0.195 0.089 0.538 CD8_CTL L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 7.25e-03 -0.249 0.092 0.538 CD8_CTL L2
ENSG00000162607 USP1 935456 sc-eQTL 3.51e-01 0.0781 0.0836 0.538 CD8_CTL L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 3.88e-02 -0.197 0.0949 0.538 CD8_CTL L2
ENSG00000079739 PGM1 -221658 sc-eQTL 3.39e-02 0.179 0.0837 0.538 CD8_Naive L2
ENSG00000088035 ALG6 4178 sc-eQTL 6.02e-01 -0.0457 0.0875 0.538 CD8_Naive L2
ENSG00000116641 DOCK7 683367 sc-eQTL 4.35e-01 0.0706 0.0904 0.538 CD8_Naive L2
ENSG00000125703 ATG4C 587621 sc-eQTL 2.15e-01 -0.108 0.0865 0.538 CD8_Naive L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 4.21e-07 -0.432 0.0828 0.538 CD8_Naive L2
ENSG00000162607 USP1 935456 sc-eQTL 1.24e-01 -0.114 0.0739 0.538 CD8_Naive L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 3.49e-01 -0.0776 0.0828 0.538 CD8_Naive L2
ENSG00000079739 PGM1 -221658 sc-eQTL 8.04e-01 0.0232 0.0933 0.544 CD8_TCM L2
ENSG00000088035 ALG6 4178 sc-eQTL 6.68e-01 -0.0406 0.0945 0.544 CD8_TCM L2
ENSG00000116641 DOCK7 683367 sc-eQTL 9.84e-01 -0.00186 0.0922 0.544 CD8_TCM L2
ENSG00000125703 ATG4C 587621 sc-eQTL 4.72e-01 -0.0679 0.0942 0.544 CD8_TCM L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 2.97e-02 -0.198 0.0906 0.544 CD8_TCM L2
ENSG00000162607 USP1 935456 sc-eQTL 8.09e-02 -0.154 0.0875 0.544 CD8_TCM L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 1.03e-01 -0.152 0.0928 0.544 CD8_TCM L2
ENSG00000079739 PGM1 -221658 sc-eQTL 9.48e-02 -0.156 0.0931 0.525 CD8_TEM L2
ENSG00000088035 ALG6 4178 sc-eQTL 4.34e-01 -0.0737 0.0939 0.525 CD8_TEM L2
ENSG00000116641 DOCK7 683367 sc-eQTL 7.06e-01 -0.0345 0.0912 0.525 CD8_TEM L2
ENSG00000125703 ATG4C 587621 sc-eQTL 1.12e-01 0.139 0.0871 0.525 CD8_TEM L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 6.18e-01 -0.0474 0.0949 0.525 CD8_TEM L2
ENSG00000162607 USP1 935456 sc-eQTL 2.93e-01 0.0952 0.0903 0.525 CD8_TEM L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 8.07e-02 -0.16 0.0913 0.525 CD8_TEM L2
ENSG00000079739 PGM1 -221658 sc-eQTL 7.40e-01 -0.03 0.0903 0.535 MAIT L2
ENSG00000088035 ALG6 4178 sc-eQTL 6.87e-01 -0.0361 0.0894 0.535 MAIT L2
ENSG00000116641 DOCK7 683367 sc-eQTL 6.81e-01 0.0352 0.0856 0.535 MAIT L2
ENSG00000125703 ATG4C 587621 sc-eQTL 5.43e-02 0.173 0.0895 0.535 MAIT L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 1.41e-02 -0.221 0.0892 0.535 MAIT L2
ENSG00000162607 USP1 935456 sc-eQTL 7.70e-01 0.0263 0.0898 0.535 MAIT L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 7.48e-01 -0.03 0.0932 0.535 MAIT L2
ENSG00000079739 PGM1 -221658 sc-eQTL 6.39e-01 0.0423 0.0899 0.54 NK_CD56bright L2
ENSG00000088035 ALG6 4178 sc-eQTL 7.20e-02 0.165 0.0915 0.54 NK_CD56bright L2
ENSG00000116641 DOCK7 683367 sc-eQTL 4.01e-01 0.0671 0.0798 0.54 NK_CD56bright L2
ENSG00000125703 ATG4C 587621 sc-eQTL 8.25e-01 0.0197 0.0893 0.54 NK_CD56bright L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 4.42e-01 -0.0716 0.0928 0.54 NK_CD56bright L2
ENSG00000162607 USP1 935456 sc-eQTL 6.96e-01 -0.0375 0.0958 0.54 NK_CD56bright L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 1.70e-01 -0.126 0.0913 0.54 NK_CD56bright L2
ENSG00000079739 PGM1 -221658 sc-eQTL 1.89e-01 0.093 0.0706 0.537 NK_CD56dim L2
ENSG00000088035 ALG6 4178 sc-eQTL 1.81e-01 -0.12 0.0896 0.537 NK_CD56dim L2
ENSG00000116641 DOCK7 683367 sc-eQTL 5.31e-01 0.0491 0.0782 0.537 NK_CD56dim L2
ENSG00000125703 ATG4C 587621 sc-eQTL 5.20e-01 -0.0512 0.0795 0.537 NK_CD56dim L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 8.66e-02 -0.155 0.0899 0.537 NK_CD56dim L2
ENSG00000162607 USP1 935456 sc-eQTL 7.12e-01 -0.0325 0.0877 0.537 NK_CD56dim L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 3.44e-01 -0.0925 0.0975 0.537 NK_CD56dim L2
ENSG00000079739 PGM1 -221658 sc-eQTL 5.24e-01 -0.0623 0.0976 0.541 NK_HLA L2
ENSG00000088035 ALG6 4178 sc-eQTL 3.07e-01 0.104 0.101 0.541 NK_HLA L2
ENSG00000116641 DOCK7 683367 sc-eQTL 7.26e-01 -0.0272 0.0775 0.541 NK_HLA L2
ENSG00000125703 ATG4C 587621 sc-eQTL 2.40e-01 0.106 0.0898 0.541 NK_HLA L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 6.67e-02 -0.173 0.0938 0.541 NK_HLA L2
ENSG00000162607 USP1 935456 sc-eQTL 7.41e-01 0.0328 0.099 0.541 NK_HLA L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 8.10e-01 0.0217 0.0901 0.541 NK_HLA L2
ENSG00000079739 PGM1 -221658 sc-eQTL 6.31e-01 0.0375 0.078 0.537 NK_cytokine L2
ENSG00000088035 ALG6 4178 sc-eQTL 9.66e-01 -0.00374 0.0882 0.537 NK_cytokine L2
ENSG00000116641 DOCK7 683367 sc-eQTL 3.67e-01 0.0738 0.0816 0.537 NK_cytokine L2
ENSG00000125703 ATG4C 587621 sc-eQTL 9.89e-02 0.138 0.083 0.537 NK_cytokine L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 3.71e-03 -0.249 0.0848 0.537 NK_cytokine L2
ENSG00000162607 USP1 935456 sc-eQTL 1.71e-01 0.125 0.0906 0.537 NK_cytokine L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 2.90e-01 -0.0976 0.092 0.537 NK_cytokine L2
ENSG00000079739 PGM1 -221658 sc-eQTL 4.80e-02 -0.218 0.109 0.552 PB L2
ENSG00000088035 ALG6 4178 sc-eQTL 3.82e-01 0.102 0.116 0.552 PB L2
ENSG00000116641 DOCK7 683367 sc-eQTL 3.02e-01 -0.129 0.124 0.552 PB L2
ENSG00000125703 ATG4C 587621 sc-eQTL 2.79e-01 0.118 0.108 0.552 PB L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 1.42e-01 -0.159 0.108 0.552 PB L2
ENSG00000162607 USP1 935456 sc-eQTL 9.72e-01 0.0038 0.108 0.552 PB L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 3.72e-01 -0.106 0.119 0.552 PB L2
ENSG00000079739 PGM1 -221658 sc-eQTL 7.60e-01 0.0257 0.084 0.537 Pro_T L2
ENSG00000088035 ALG6 4178 sc-eQTL 9.81e-01 0.00204 0.0854 0.537 Pro_T L2
ENSG00000116641 DOCK7 683367 sc-eQTL 2.88e-01 -0.091 0.0855 0.537 Pro_T L2
ENSG00000125703 ATG4C 587621 sc-eQTL 6.60e-01 -0.033 0.075 0.537 Pro_T L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 1.97e-01 0.0971 0.075 0.537 Pro_T L2
ENSG00000162607 USP1 935456 sc-eQTL 9.80e-01 0.0013 0.0518 0.537 Pro_T L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 6.12e-01 0.0444 0.0874 0.537 Pro_T L2
ENSG00000079739 PGM1 -221658 sc-eQTL 3.58e-01 0.0804 0.0873 0.538 Treg L2
ENSG00000088035 ALG6 4178 sc-eQTL 2.36e-01 0.111 0.0932 0.538 Treg L2
ENSG00000116641 DOCK7 683367 sc-eQTL 1.07e-01 0.138 0.0854 0.538 Treg L2
ENSG00000125703 ATG4C 587621 sc-eQTL 3.08e-01 0.0894 0.0875 0.538 Treg L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 6.24e-01 -0.0451 0.0918 0.538 Treg L2
ENSG00000162607 USP1 935456 sc-eQTL 2.01e-01 0.113 0.0885 0.538 Treg L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 6.23e-01 -0.0433 0.0878 0.538 Treg L2
ENSG00000079739 PGM1 -221658 sc-eQTL 9.24e-01 -0.0083 0.0874 0.537 cDC L2
ENSG00000088035 ALG6 4178 sc-eQTL 1.72e-01 -0.121 0.0882 0.537 cDC L2
ENSG00000116641 DOCK7 683367 sc-eQTL 4.85e-01 0.0607 0.0869 0.537 cDC L2
ENSG00000125703 ATG4C 587621 sc-eQTL 3.21e-01 0.075 0.0753 0.537 cDC L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 4.02e-01 0.0803 0.0955 0.537 cDC L2
ENSG00000162607 USP1 935456 sc-eQTL 2.94e-01 -0.0894 0.085 0.537 cDC L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 4.10e-01 -0.0634 0.0768 0.537 cDC L2
ENSG00000079739 PGM1 -221658 sc-eQTL 8.03e-01 -0.0208 0.0829 0.538 cMono_IL1B L2
ENSG00000088035 ALG6 4178 sc-eQTL 4.00e-01 0.0699 0.0829 0.538 cMono_IL1B L2
ENSG00000116641 DOCK7 683367 sc-eQTL 3.15e-01 -0.0879 0.0873 0.538 cMono_IL1B L2
ENSG00000125703 ATG4C 587621 sc-eQTL 4.21e-01 0.0495 0.0615 0.538 cMono_IL1B L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 7.25e-06 -0.383 0.0831 0.538 cMono_IL1B L2
ENSG00000162607 USP1 935456 sc-eQTL 7.05e-01 -0.0291 0.0769 0.538 cMono_IL1B L2
ENSG00000079739 PGM1 -221658 sc-eQTL 5.68e-01 0.053 0.0926 0.538 cMono_S100A L2
ENSG00000088035 ALG6 4178 sc-eQTL 6.74e-01 0.0395 0.0939 0.538 cMono_S100A L2
ENSG00000116641 DOCK7 683367 sc-eQTL 3.83e-01 0.0759 0.0869 0.538 cMono_S100A L2
ENSG00000125703 ATG4C 587621 sc-eQTL 6.31e-01 0.0362 0.0753 0.538 cMono_S100A L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 7.90e-02 -0.149 0.0844 0.538 cMono_S100A L2
ENSG00000162607 USP1 935456 sc-eQTL 9.83e-02 -0.144 0.087 0.538 cMono_S100A L2
ENSG00000079739 PGM1 -221658 sc-eQTL 4.54e-01 0.0776 0.103 0.548 gdT L2
ENSG00000088035 ALG6 4178 sc-eQTL 4.60e-01 -0.0818 0.11 0.548 gdT L2
ENSG00000116641 DOCK7 683367 sc-eQTL 4.59e-02 0.215 0.107 0.548 gdT L2
ENSG00000125703 ATG4C 587621 sc-eQTL 3.58e-01 0.0952 0.103 0.548 gdT L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 9.30e-02 -0.184 0.109 0.548 gdT L2
ENSG00000162607 USP1 935456 sc-eQTL 4.96e-01 -0.071 0.104 0.548 gdT L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 5.44e-01 0.0658 0.108 0.548 gdT L2
ENSG00000079739 PGM1 -221658 sc-eQTL 5.03e-01 0.0629 0.0939 0.538 intMono L2
ENSG00000088035 ALG6 4178 sc-eQTL 6.54e-01 -0.0393 0.0875 0.538 intMono L2
ENSG00000116641 DOCK7 683367 sc-eQTL 5.30e-01 -0.0561 0.0893 0.538 intMono L2
ENSG00000125703 ATG4C 587621 sc-eQTL 1.90e-01 0.112 0.085 0.538 intMono L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 3.62e-02 -0.196 0.093 0.538 intMono L2
ENSG00000162607 USP1 935456 sc-eQTL 7.95e-01 -0.0248 0.0956 0.538 intMono L2
ENSG00000079739 PGM1 -221658 sc-eQTL 7.17e-01 0.0308 0.0848 0.543 ncMono L2
ENSG00000088035 ALG6 4178 sc-eQTL 4.61e-01 -0.0688 0.0931 0.543 ncMono L2
ENSG00000116641 DOCK7 683367 sc-eQTL 8.40e-01 0.0185 0.0917 0.543 ncMono L2
ENSG00000125703 ATG4C 587621 sc-eQTL 3.43e-01 -0.0813 0.0855 0.543 ncMono L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 5.10e-02 -0.174 0.0888 0.543 ncMono L2
ENSG00000162607 USP1 935456 sc-eQTL 5.09e-01 0.0605 0.0915 0.543 ncMono L2
ENSG00000079739 PGM1 -221658 sc-eQTL 5.24e-01 -0.0645 0.101 0.531 pDC L2
ENSG00000088035 ALG6 4178 sc-eQTL 5.21e-01 0.0631 0.0982 0.531 pDC L2
ENSG00000116641 DOCK7 683367 sc-eQTL 5.43e-01 -0.0612 0.1 0.531 pDC L2
ENSG00000125703 ATG4C 587621 sc-eQTL 9.52e-01 -0.00542 0.0901 0.531 pDC L2
ENSG00000142856 ITGB3BP -221968 sc-eQTL 6.65e-01 -0.0438 0.101 0.531 pDC L2
ENSG00000162607 USP1 935456 sc-eQTL 1.77e-01 0.139 0.102 0.531 pDC L2
ENSG00000203965 EFCAB7 -151619 sc-eQTL 7.74e-01 -0.0257 0.0895 0.531 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -221658 sc-eQTL 1.11e-01 0.137 0.0857 0.538 B_Memory LOneK1K
ENSG00000088035 ALG6 4178 sc-eQTL 3.26e-01 -0.0937 0.0951 0.538 B_Memory LOneK1K
ENSG00000116641 DOCK7 683367 sc-eQTL 3.79e-01 -0.0727 0.0826 0.538 B_Memory LOneK1K
ENSG00000125703 ATG4C 587621 sc-eQTL 2.64e-01 0.0747 0.0667 0.538 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -221968 sc-eQTL 2.20e-03 -0.266 0.0859 0.538 B_Memory LOneK1K
ENSG00000162607 USP1 935456 sc-eQTL 7.75e-01 0.0244 0.0853 0.538 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -151619 sc-eQTL 4.45e-05 -0.367 0.088 0.538 B_Memory LOneK1K
ENSG00000079739 PGM1 -221658 sc-eQTL 3.00e-02 0.193 0.0882 0.538 B_Naive LOneK1K
ENSG00000088035 ALG6 4178 sc-eQTL 8.29e-01 0.0198 0.0918 0.538 B_Naive LOneK1K
ENSG00000116641 DOCK7 683367 sc-eQTL 5.02e-01 -0.0575 0.0856 0.538 B_Naive LOneK1K
ENSG00000125703 ATG4C 587621 sc-eQTL 4.10e-01 -0.0539 0.0653 0.538 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -221968 sc-eQTL 4.07e-05 -0.372 0.0889 0.538 B_Naive LOneK1K
ENSG00000162607 USP1 935456 sc-eQTL 2.32e-01 0.0949 0.0792 0.538 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -151619 sc-eQTL 5.82e-01 -0.0512 0.0929 0.538 B_Naive LOneK1K
ENSG00000079739 PGM1 -221658 sc-eQTL 9.03e-01 0.0104 0.0852 0.538 CD14_Mono LOneK1K
ENSG00000088035 ALG6 4178 sc-eQTL 4.35e-01 0.0644 0.0824 0.538 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 683367 sc-eQTL 6.52e-01 -0.0375 0.0831 0.538 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 587621 sc-eQTL 4.68e-01 0.0417 0.0574 0.538 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -221968 sc-eQTL 1.90e-05 -0.356 0.0814 0.538 CD14_Mono LOneK1K
ENSG00000162607 USP1 935456 sc-eQTL 9.90e-02 -0.12 0.0721 0.538 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -221658 sc-eQTL 6.34e-01 0.0392 0.0821 0.537 CD16_Mono LOneK1K
ENSG00000088035 ALG6 4178 sc-eQTL 8.82e-01 -0.0139 0.0932 0.537 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 683367 sc-eQTL 3.34e-01 -0.0892 0.092 0.537 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 587621 sc-eQTL 9.11e-01 0.00883 0.0786 0.537 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -221968 sc-eQTL 1.85e-03 -0.281 0.0892 0.537 CD16_Mono LOneK1K
ENSG00000162607 USP1 935456 sc-eQTL 9.29e-01 -0.00767 0.0858 0.537 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -221658 sc-eQTL 3.84e-01 0.0605 0.0693 0.537 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 4178 sc-eQTL 5.54e-01 -0.0494 0.0833 0.537 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 683367 sc-eQTL 2.52e-01 0.0856 0.0744 0.537 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 587621 sc-eQTL 2.86e-01 0.0795 0.0743 0.537 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -221968 sc-eQTL 1.09e-03 -0.285 0.0861 0.537 NK_CD56dim LOneK1K
ENSG00000162607 USP1 935456 sc-eQTL 8.01e-01 0.0202 0.0802 0.537 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -151619 sc-eQTL 1.63e-01 -0.136 0.0971 0.537 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -221658 eQTL 2.63e-13 0.127 0.0171 0.0 0.0 0.47
ENSG00000088035 ALG6 4178 eQTL 8.98e-05 0.0511 0.013 0.0 0.0 0.47
ENSG00000116641 DOCK7 683385 eQTL 0.00448 -0.062 0.0218 0.00288 0.0 0.47
ENSG00000116652 DLEU2L -175329 eQTL 0.0431 -0.0518 0.0256 0.0 0.0 0.47
ENSG00000185483 ROR1 -402264 pQTL 0.0259 0.0292 0.0131 0.0 0.0 0.465
ENSG00000203965 EFCAB7 -151619 eQTL 3.38e-04 -0.0847 0.0236 0.0 0.0 0.47

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -221658 2.04e-06 2.42e-06 4.65e-07 1.64e-06 6.3e-07 7.92e-07 1.41e-06 7.56e-07 1.85e-06 9.12e-07 2.1e-06 1.34e-06 3.47e-06 1.12e-06 8.73e-07 1.62e-06 1.14e-06 2.18e-06 1.29e-06 1.3e-06 1.14e-06 2.91e-06 2.11e-06 9.73e-07 2.84e-06 1.21e-06 1.29e-06 1.46e-06 1.94e-06 1.86e-06 1.21e-06 3.8e-07 5.96e-07 1.18e-06 9.93e-07 9.73e-07 7.48e-07 4.39e-07 1.14e-06 4.35e-07 2.22e-07 2.9e-06 4.93e-07 1.89e-07 3.69e-07 3.34e-07 8.22e-07 1.95e-07 1.77e-07
ENSG00000162607 \N 935456 2.76e-07 1.27e-07 5.72e-08 1.82e-07 1.03e-07 9.48e-08 1.67e-07 5.75e-08 1.47e-07 6.4e-08 1.63e-07 1.08e-07 1.59e-07 7.37e-08 6.25e-08 7.74e-08 4.24e-08 1.51e-07 6.75e-08 4.78e-08 1.25e-07 1.25e-07 1.44e-07 2.87e-08 1.55e-07 1.22e-07 1.18e-07 9.92e-08 1.22e-07 9.49e-08 1.06e-07 2.96e-08 3.51e-08 8.89e-08 4.84e-08 3.28e-08 5.29e-08 8.72e-08 6.86e-08 4.55e-08 5.41e-08 1.4e-07 5.27e-08 1.55e-08 3.83e-08 1.89e-08 1.11e-07 1.89e-09 4.8e-08