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Genes within 1Mb (chr1:63353151:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -240260 sc-eQTL 2.35e-01 -0.0951 0.0799 0.581 B L1
ENSG00000088035 ALG6 -14424 sc-eQTL 5.46e-01 -0.0501 0.0829 0.581 B L1
ENSG00000116641 DOCK7 664765 sc-eQTL 6.27e-01 0.0404 0.083 0.581 B L1
ENSG00000125703 ATG4C 569019 sc-eQTL 6.77e-01 0.0241 0.0577 0.581 B L1
ENSG00000142856 ITGB3BP -240570 sc-eQTL 3.44e-03 0.266 0.09 0.581 B L1
ENSG00000162607 USP1 916854 sc-eQTL 1.63e-01 -0.111 0.0793 0.581 B L1
ENSG00000203965 EFCAB7 -170221 sc-eQTL 3.74e-02 0.195 0.0931 0.581 B L1
ENSG00000079739 PGM1 -240260 sc-eQTL 2.10e-01 -0.0859 0.0683 0.581 CD4T L1
ENSG00000088035 ALG6 -14424 sc-eQTL 5.96e-01 -0.0402 0.0757 0.581 CD4T L1
ENSG00000116641 DOCK7 664765 sc-eQTL 2.82e-01 0.0825 0.0764 0.581 CD4T L1
ENSG00000125703 ATG4C 569019 sc-eQTL 9.55e-01 -0.00351 0.0619 0.581 CD4T L1
ENSG00000142856 ITGB3BP -240570 sc-eQTL 3.66e-04 0.309 0.0852 0.581 CD4T L1
ENSG00000162607 USP1 916854 sc-eQTL 1.53e-01 0.0856 0.0597 0.581 CD4T L1
ENSG00000203965 EFCAB7 -170221 sc-eQTL 3.33e-03 0.229 0.0773 0.581 CD4T L1
ENSG00000079739 PGM1 -240260 sc-eQTL 4.65e-01 0.0559 0.0763 0.581 CD8T L1
ENSG00000088035 ALG6 -14424 sc-eQTL 2.46e-01 0.0976 0.0839 0.581 CD8T L1
ENSG00000116641 DOCK7 664765 sc-eQTL 6.64e-01 -0.0371 0.0853 0.581 CD8T L1
ENSG00000125703 ATG4C 569019 sc-eQTL 8.43e-01 0.0161 0.081 0.581 CD8T L1
ENSG00000142856 ITGB3BP -240570 sc-eQTL 1.35e-05 0.386 0.0866 0.581 CD8T L1
ENSG00000162607 USP1 916854 sc-eQTL 4.73e-01 -0.0507 0.0705 0.581 CD8T L1
ENSG00000203965 EFCAB7 -170221 sc-eQTL 6.85e-04 0.303 0.0879 0.581 CD8T L1
ENSG00000079739 PGM1 -240260 sc-eQTL 9.85e-01 0.0016 0.0847 0.583 DC L1
ENSG00000088035 ALG6 -14424 sc-eQTL 6.05e-01 -0.0453 0.0874 0.583 DC L1
ENSG00000116641 DOCK7 664765 sc-eQTL 8.76e-01 0.014 0.0896 0.583 DC L1
ENSG00000125703 ATG4C 569019 sc-eQTL 6.48e-01 -0.0321 0.0701 0.583 DC L1
ENSG00000142856 ITGB3BP -240570 sc-eQTL 9.78e-01 -0.00275 0.098 0.583 DC L1
ENSG00000162607 USP1 916854 sc-eQTL 6.34e-01 0.0408 0.0855 0.583 DC L1
ENSG00000203965 EFCAB7 -170221 sc-eQTL 4.98e-01 0.0578 0.0852 0.583 DC L1
ENSG00000079739 PGM1 -240260 sc-eQTL 1.11e-01 0.131 0.0816 0.581 Mono L1
ENSG00000088035 ALG6 -14424 sc-eQTL 6.06e-01 -0.0443 0.0856 0.581 Mono L1
ENSG00000116641 DOCK7 664765 sc-eQTL 4.84e-01 0.0581 0.0828 0.581 Mono L1
ENSG00000125703 ATG4C 569019 sc-eQTL 1.61e-01 -0.0784 0.0557 0.581 Mono L1
ENSG00000142856 ITGB3BP -240570 sc-eQTL 5.10e-04 0.304 0.086 0.581 Mono L1
ENSG00000162607 USP1 916854 sc-eQTL 1.31e-01 0.11 0.0723 0.581 Mono L1
ENSG00000079739 PGM1 -240260 sc-eQTL 8.12e-01 -0.0167 0.07 0.584 NK L1
ENSG00000088035 ALG6 -14424 sc-eQTL 2.52e-01 -0.094 0.0818 0.584 NK L1
ENSG00000116641 DOCK7 664765 sc-eQTL 1.65e-01 -0.0938 0.0673 0.584 NK L1
ENSG00000125703 ATG4C 569019 sc-eQTL 3.95e-01 -0.0618 0.0725 0.584 NK L1
ENSG00000142856 ITGB3BP -240570 sc-eQTL 3.65e-02 0.188 0.0893 0.584 NK L1
ENSG00000162607 USP1 916854 sc-eQTL 4.05e-01 0.0671 0.0805 0.584 NK L1
ENSG00000203965 EFCAB7 -170221 sc-eQTL 2.41e-02 0.22 0.0968 0.584 NK L1
ENSG00000079739 PGM1 -240260 sc-eQTL 7.20e-01 0.0286 0.0797 0.581 Other_T L1
ENSG00000088035 ALG6 -14424 sc-eQTL 4.89e-01 0.0554 0.08 0.581 Other_T L1
ENSG00000116641 DOCK7 664765 sc-eQTL 6.21e-03 -0.222 0.0804 0.581 Other_T L1
ENSG00000125703 ATG4C 569019 sc-eQTL 9.37e-01 -0.00559 0.0708 0.581 Other_T L1
ENSG00000142856 ITGB3BP -240570 sc-eQTL 2.06e-01 0.0794 0.0626 0.581 Other_T L1
ENSG00000162607 USP1 916854 sc-eQTL 5.79e-01 0.0302 0.0544 0.581 Other_T L1
ENSG00000203965 EFCAB7 -170221 sc-eQTL 8.91e-01 -0.0132 0.0969 0.581 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -240260 sc-eQTL 3.01e-01 -0.108 0.104 0.574 B_Activated L2
ENSG00000088035 ALG6 -14424 sc-eQTL 1.45e-02 -0.243 0.0986 0.574 B_Activated L2
ENSG00000116641 DOCK7 664765 sc-eQTL 8.59e-01 0.0166 0.0934 0.574 B_Activated L2
ENSG00000125703 ATG4C 569019 sc-eQTL 5.26e-01 -0.0624 0.0981 0.574 B_Activated L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 3.90e-02 0.197 0.0948 0.574 B_Activated L2
ENSG00000162607 USP1 916854 sc-eQTL 9.43e-01 0.00745 0.104 0.574 B_Activated L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 1.43e-01 0.133 0.0903 0.574 B_Activated L2
ENSG00000079739 PGM1 -240260 sc-eQTL 1.53e-01 -0.137 0.0957 0.584 B_Intermediate L2
ENSG00000088035 ALG6 -14424 sc-eQTL 2.22e-01 0.119 0.0973 0.584 B_Intermediate L2
ENSG00000116641 DOCK7 664765 sc-eQTL 3.01e-01 0.0965 0.093 0.584 B_Intermediate L2
ENSG00000125703 ATG4C 569019 sc-eQTL 8.88e-01 -0.0112 0.079 0.584 B_Intermediate L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 9.27e-03 0.243 0.0926 0.584 B_Intermediate L2
ENSG00000162607 USP1 916854 sc-eQTL 8.94e-01 -0.0126 0.0939 0.584 B_Intermediate L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 7.41e-02 0.166 0.0925 0.584 B_Intermediate L2
ENSG00000079739 PGM1 -240260 sc-eQTL 9.32e-01 -0.00802 0.0943 0.58 B_Memory L2
ENSG00000088035 ALG6 -14424 sc-eQTL 2.36e-01 -0.113 0.0955 0.58 B_Memory L2
ENSG00000116641 DOCK7 664765 sc-eQTL 4.73e-01 0.0645 0.0898 0.58 B_Memory L2
ENSG00000125703 ATG4C 569019 sc-eQTL 5.11e-01 -0.0561 0.0853 0.58 B_Memory L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 4.54e-01 0.0733 0.0976 0.58 B_Memory L2
ENSG00000162607 USP1 916854 sc-eQTL 4.16e-01 0.0803 0.0985 0.58 B_Memory L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 4.32e-01 0.0763 0.0969 0.58 B_Memory L2
ENSG00000079739 PGM1 -240260 sc-eQTL 1.98e-01 -0.121 0.0936 0.581 B_Naive1 L2
ENSG00000088035 ALG6 -14424 sc-eQTL 7.21e-01 -0.0338 0.0943 0.581 B_Naive1 L2
ENSG00000116641 DOCK7 664765 sc-eQTL 8.10e-01 0.0217 0.0904 0.581 B_Naive1 L2
ENSG00000125703 ATG4C 569019 sc-eQTL 8.46e-01 0.0135 0.0696 0.581 B_Naive1 L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 3.30e-02 0.196 0.0914 0.581 B_Naive1 L2
ENSG00000162607 USP1 916854 sc-eQTL 1.45e-01 -0.118 0.0808 0.581 B_Naive1 L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 2.41e-01 0.116 0.0983 0.581 B_Naive1 L2
ENSG00000079739 PGM1 -240260 sc-eQTL 8.30e-01 -0.0201 0.0935 0.582 B_Naive2 L2
ENSG00000088035 ALG6 -14424 sc-eQTL 9.07e-01 0.0114 0.0975 0.582 B_Naive2 L2
ENSG00000116641 DOCK7 664765 sc-eQTL 8.19e-01 0.0215 0.0938 0.582 B_Naive2 L2
ENSG00000125703 ATG4C 569019 sc-eQTL 1.47e-01 0.131 0.0898 0.582 B_Naive2 L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 6.95e-03 0.262 0.0962 0.582 B_Naive2 L2
ENSG00000162607 USP1 916854 sc-eQTL 5.07e-01 -0.0619 0.0931 0.582 B_Naive2 L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 6.41e-01 -0.0454 0.0974 0.582 B_Naive2 L2
ENSG00000079739 PGM1 -240260 sc-eQTL 5.11e-01 -0.0626 0.095 0.586 CD4_CTL L2
ENSG00000088035 ALG6 -14424 sc-eQTL 7.82e-01 -0.0279 0.101 0.586 CD4_CTL L2
ENSG00000116641 DOCK7 664765 sc-eQTL 1.02e-01 -0.144 0.0873 0.586 CD4_CTL L2
ENSG00000125703 ATG4C 569019 sc-eQTL 7.32e-01 -0.0312 0.091 0.586 CD4_CTL L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 6.77e-01 0.0406 0.0973 0.586 CD4_CTL L2
ENSG00000162607 USP1 916854 sc-eQTL 6.83e-02 0.168 0.0918 0.586 CD4_CTL L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 9.88e-01 0.00138 0.0925 0.586 CD4_CTL L2
ENSG00000079739 PGM1 -240260 sc-eQTL 3.71e-01 -0.0688 0.0767 0.581 CD4_Naive L2
ENSG00000088035 ALG6 -14424 sc-eQTL 8.45e-01 -0.0164 0.0835 0.581 CD4_Naive L2
ENSG00000116641 DOCK7 664765 sc-eQTL 4.54e-01 0.0615 0.0819 0.581 CD4_Naive L2
ENSG00000125703 ATG4C 569019 sc-eQTL 7.92e-01 0.0192 0.0725 0.581 CD4_Naive L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 9.95e-04 0.288 0.0864 0.581 CD4_Naive L2
ENSG00000162607 USP1 916854 sc-eQTL 6.29e-01 0.0328 0.0677 0.581 CD4_Naive L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 1.43e-02 0.214 0.0867 0.581 CD4_Naive L2
ENSG00000079739 PGM1 -240260 sc-eQTL 8.66e-01 0.0135 0.08 0.581 CD4_TCM L2
ENSG00000088035 ALG6 -14424 sc-eQTL 9.84e-01 -0.00189 0.0929 0.581 CD4_TCM L2
ENSG00000116641 DOCK7 664765 sc-eQTL 1.12e-02 0.207 0.0811 0.581 CD4_TCM L2
ENSG00000125703 ATG4C 569019 sc-eQTL 8.20e-02 0.139 0.0796 0.581 CD4_TCM L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 2.85e-03 0.279 0.0925 0.581 CD4_TCM L2
ENSG00000162607 USP1 916854 sc-eQTL 7.23e-02 0.139 0.0769 0.581 CD4_TCM L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 4.06e-03 0.26 0.0896 0.581 CD4_TCM L2
ENSG00000079739 PGM1 -240260 sc-eQTL 5.07e-01 -0.0625 0.0941 0.581 CD4_TEM L2
ENSG00000088035 ALG6 -14424 sc-eQTL 7.58e-01 -0.0292 0.0946 0.581 CD4_TEM L2
ENSG00000116641 DOCK7 664765 sc-eQTL 8.35e-01 0.0193 0.0922 0.581 CD4_TEM L2
ENSG00000125703 ATG4C 569019 sc-eQTL 1.05e-01 -0.145 0.089 0.581 CD4_TEM L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 8.49e-02 0.159 0.0918 0.581 CD4_TEM L2
ENSG00000162607 USP1 916854 sc-eQTL 3.09e-02 0.188 0.0866 0.581 CD4_TEM L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 9.53e-01 -0.00563 0.0958 0.581 CD4_TEM L2
ENSG00000079739 PGM1 -240260 sc-eQTL 3.45e-01 0.0813 0.0859 0.581 CD8_CTL L2
ENSG00000088035 ALG6 -14424 sc-eQTL 9.87e-02 0.151 0.091 0.581 CD8_CTL L2
ENSG00000116641 DOCK7 664765 sc-eQTL 8.96e-01 -0.0113 0.0869 0.581 CD8_CTL L2
ENSG00000125703 ATG4C 569019 sc-eQTL 1.18e-01 -0.145 0.092 0.581 CD8_CTL L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 6.03e-02 0.18 0.0954 0.581 CD8_CTL L2
ENSG00000162607 USP1 916854 sc-eQTL 6.02e-01 -0.0449 0.0861 0.581 CD8_CTL L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 1.42e-01 0.144 0.098 0.581 CD8_CTL L2
ENSG00000079739 PGM1 -240260 sc-eQTL 7.34e-01 -0.0294 0.0863 0.581 CD8_Naive L2
ENSG00000088035 ALG6 -14424 sc-eQTL 8.64e-01 0.0154 0.0894 0.581 CD8_Naive L2
ENSG00000116641 DOCK7 664765 sc-eQTL 6.71e-01 0.0393 0.0923 0.581 CD8_Naive L2
ENSG00000125703 ATG4C 569019 sc-eQTL 1.91e-01 0.116 0.0883 0.581 CD8_Naive L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 1.32e-04 0.338 0.0868 0.581 CD8_Naive L2
ENSG00000162607 USP1 916854 sc-eQTL 8.03e-01 0.019 0.0759 0.581 CD8_Naive L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 3.94e-01 0.0723 0.0845 0.581 CD8_Naive L2
ENSG00000079739 PGM1 -240260 sc-eQTL 8.26e-01 -0.0209 0.0953 0.576 CD8_TCM L2
ENSG00000088035 ALG6 -14424 sc-eQTL 6.24e-01 0.0474 0.0964 0.576 CD8_TCM L2
ENSG00000116641 DOCK7 664765 sc-eQTL 1.65e-01 -0.131 0.0937 0.576 CD8_TCM L2
ENSG00000125703 ATG4C 569019 sc-eQTL 2.87e-01 0.103 0.096 0.576 CD8_TCM L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 3.64e-01 0.085 0.0934 0.576 CD8_TCM L2
ENSG00000162607 USP1 916854 sc-eQTL 3.12e-01 0.0911 0.0898 0.576 CD8_TCM L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 3.56e-01 0.0881 0.0952 0.576 CD8_TCM L2
ENSG00000079739 PGM1 -240260 sc-eQTL 3.89e-01 0.0863 0.1 0.589 CD8_TEM L2
ENSG00000088035 ALG6 -14424 sc-eQTL 7.83e-01 0.0277 0.101 0.589 CD8_TEM L2
ENSG00000116641 DOCK7 664765 sc-eQTL 8.97e-01 -0.0127 0.0975 0.589 CD8_TEM L2
ENSG00000125703 ATG4C 569019 sc-eQTL 7.39e-01 -0.0313 0.0937 0.589 CD8_TEM L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 3.26e-01 0.0997 0.101 0.589 CD8_TEM L2
ENSG00000162607 USP1 916854 sc-eQTL 3.93e-01 -0.0827 0.0966 0.589 CD8_TEM L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 9.48e-02 0.164 0.0977 0.589 CD8_TEM L2
ENSG00000079739 PGM1 -240260 sc-eQTL 6.00e-01 -0.0489 0.0929 0.584 MAIT L2
ENSG00000088035 ALG6 -14424 sc-eQTL 1.34e-01 0.138 0.0915 0.584 MAIT L2
ENSG00000116641 DOCK7 664765 sc-eQTL 2.96e-02 -0.191 0.0872 0.584 MAIT L2
ENSG00000125703 ATG4C 569019 sc-eQTL 6.89e-01 -0.0373 0.0929 0.584 MAIT L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 1.52e-01 0.133 0.0927 0.584 MAIT L2
ENSG00000162607 USP1 916854 sc-eQTL 6.22e-01 0.0457 0.0924 0.584 MAIT L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 4.96e-01 -0.0653 0.0958 0.584 MAIT L2
ENSG00000079739 PGM1 -240260 sc-eQTL 8.83e-01 0.0137 0.0925 0.58 NK_CD56bright L2
ENSG00000088035 ALG6 -14424 sc-eQTL 4.12e-01 -0.0778 0.0946 0.58 NK_CD56bright L2
ENSG00000116641 DOCK7 664765 sc-eQTL 3.53e-01 -0.0763 0.082 0.58 NK_CD56bright L2
ENSG00000125703 ATG4C 569019 sc-eQTL 6.12e-01 -0.0466 0.0917 0.58 NK_CD56bright L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 2.93e-01 0.1 0.0953 0.58 NK_CD56bright L2
ENSG00000162607 USP1 916854 sc-eQTL 1.26e-01 0.151 0.0979 0.58 NK_CD56bright L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 4.80e-01 0.0666 0.0941 0.58 NK_CD56bright L2
ENSG00000079739 PGM1 -240260 sc-eQTL 3.14e-01 -0.073 0.0724 0.582 NK_CD56dim L2
ENSG00000088035 ALG6 -14424 sc-eQTL 8.71e-01 -0.0149 0.092 0.582 NK_CD56dim L2
ENSG00000116641 DOCK7 664765 sc-eQTL 3.10e-01 -0.0812 0.0799 0.582 NK_CD56dim L2
ENSG00000125703 ATG4C 569019 sc-eQTL 9.65e-01 -0.00354 0.0813 0.582 NK_CD56dim L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 2.01e-01 0.118 0.0922 0.582 NK_CD56dim L2
ENSG00000162607 USP1 916854 sc-eQTL 9.69e-01 0.00346 0.0898 0.582 NK_CD56dim L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 1.29e-01 0.151 0.0994 0.582 NK_CD56dim L2
ENSG00000079739 PGM1 -240260 sc-eQTL 3.05e-01 0.102 0.0989 0.58 NK_HLA L2
ENSG00000088035 ALG6 -14424 sc-eQTL 2.67e-01 -0.114 0.103 0.58 NK_HLA L2
ENSG00000116641 DOCK7 664765 sc-eQTL 5.22e-01 -0.0505 0.0786 0.58 NK_HLA L2
ENSG00000125703 ATG4C 569019 sc-eQTL 9.19e-01 0.00929 0.0915 0.58 NK_HLA L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 3.16e-01 0.0963 0.0958 0.58 NK_HLA L2
ENSG00000162607 USP1 916854 sc-eQTL 7.21e-01 -0.036 0.1 0.58 NK_HLA L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 9.10e-01 0.0104 0.0915 0.58 NK_HLA L2
ENSG00000079739 PGM1 -240260 sc-eQTL 7.31e-01 0.0276 0.08 0.582 NK_cytokine L2
ENSG00000088035 ALG6 -14424 sc-eQTL 2.02e-01 -0.115 0.0901 0.582 NK_cytokine L2
ENSG00000116641 DOCK7 664765 sc-eQTL 3.31e-01 -0.0816 0.0836 0.582 NK_cytokine L2
ENSG00000125703 ATG4C 569019 sc-eQTL 4.18e-01 -0.0695 0.0856 0.582 NK_cytokine L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 5.48e-02 0.17 0.088 0.582 NK_cytokine L2
ENSG00000162607 USP1 916854 sc-eQTL 9.59e-01 -0.00484 0.0933 0.582 NK_cytokine L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 1.22e-01 0.146 0.0941 0.582 NK_cytokine L2
ENSG00000079739 PGM1 -240260 sc-eQTL 6.00e-02 0.22 0.116 0.567 PB L2
ENSG00000088035 ALG6 -14424 sc-eQTL 2.43e-02 -0.276 0.121 0.567 PB L2
ENSG00000116641 DOCK7 664765 sc-eQTL 6.22e-01 0.0654 0.132 0.567 PB L2
ENSG00000125703 ATG4C 569019 sc-eQTL 5.85e-01 -0.0632 0.115 0.567 PB L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 7.34e-01 0.0392 0.115 0.567 PB L2
ENSG00000162607 USP1 916854 sc-eQTL 3.46e-01 -0.108 0.114 0.567 PB L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 9.70e-01 -0.00475 0.127 0.567 PB L2
ENSG00000079739 PGM1 -240260 sc-eQTL 9.35e-01 0.00708 0.0862 0.58 Pro_T L2
ENSG00000088035 ALG6 -14424 sc-eQTL 2.98e-01 -0.0912 0.0875 0.58 Pro_T L2
ENSG00000116641 DOCK7 664765 sc-eQTL 7.35e-01 0.0298 0.088 0.58 Pro_T L2
ENSG00000125703 ATG4C 569019 sc-eQTL 5.56e-01 0.0454 0.077 0.58 Pro_T L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 1.76e-01 -0.105 0.0769 0.58 Pro_T L2
ENSG00000162607 USP1 916854 sc-eQTL 8.55e-01 -0.00971 0.0531 0.58 Pro_T L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 7.33e-01 -0.0306 0.0898 0.58 Pro_T L2
ENSG00000079739 PGM1 -240260 sc-eQTL 6.38e-01 -0.0424 0.09 0.581 Treg L2
ENSG00000088035 ALG6 -14424 sc-eQTL 2.49e-01 -0.111 0.096 0.581 Treg L2
ENSG00000116641 DOCK7 664765 sc-eQTL 3.63e-01 -0.0805 0.0882 0.581 Treg L2
ENSG00000125703 ATG4C 569019 sc-eQTL 2.18e-01 -0.111 0.09 0.581 Treg L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 3.07e-01 0.0965 0.0942 0.581 Treg L2
ENSG00000162607 USP1 916854 sc-eQTL 4.77e-01 -0.0651 0.0913 0.581 Treg L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 1.85e-01 0.12 0.09 0.581 Treg L2
ENSG00000079739 PGM1 -240260 sc-eQTL 4.66e-01 0.0678 0.0928 0.59 cDC L2
ENSG00000088035 ALG6 -14424 sc-eQTL 4.50e-01 0.0713 0.0941 0.59 cDC L2
ENSG00000116641 DOCK7 664765 sc-eQTL 5.76e-01 -0.0518 0.0924 0.59 cDC L2
ENSG00000125703 ATG4C 569019 sc-eQTL 2.44e-01 -0.0934 0.08 0.59 cDC L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 3.67e-01 -0.0918 0.102 0.59 cDC L2
ENSG00000162607 USP1 916854 sc-eQTL 4.81e-01 0.0639 0.0905 0.59 cDC L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 3.21e-01 0.0812 0.0816 0.59 cDC L2
ENSG00000079739 PGM1 -240260 sc-eQTL 8.46e-02 0.145 0.0839 0.581 cMono_IL1B L2
ENSG00000088035 ALG6 -14424 sc-eQTL 9.28e-01 -0.00763 0.0846 0.581 cMono_IL1B L2
ENSG00000116641 DOCK7 664765 sc-eQTL 7.90e-01 0.0238 0.0892 0.581 cMono_IL1B L2
ENSG00000125703 ATG4C 569019 sc-eQTL 2.49e-01 -0.0722 0.0625 0.581 cMono_IL1B L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 1.52e-03 0.279 0.0867 0.581 cMono_IL1B L2
ENSG00000162607 USP1 916854 sc-eQTL 6.47e-01 0.0359 0.0783 0.581 cMono_IL1B L2
ENSG00000079739 PGM1 -240260 sc-eQTL 8.20e-01 0.0215 0.0942 0.581 cMono_S100A L2
ENSG00000088035 ALG6 -14424 sc-eQTL 5.72e-01 0.054 0.0954 0.581 cMono_S100A L2
ENSG00000116641 DOCK7 664765 sc-eQTL 2.91e-01 -0.0934 0.0883 0.581 cMono_S100A L2
ENSG00000125703 ATG4C 569019 sc-eQTL 4.13e-01 -0.0627 0.0765 0.581 cMono_S100A L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 1.92e-01 0.113 0.0861 0.581 cMono_S100A L2
ENSG00000162607 USP1 916854 sc-eQTL 7.19e-02 0.16 0.0883 0.581 cMono_S100A L2
ENSG00000079739 PGM1 -240260 sc-eQTL 7.27e-01 -0.0371 0.106 0.585 gdT L2
ENSG00000088035 ALG6 -14424 sc-eQTL 2.67e-01 0.126 0.113 0.585 gdT L2
ENSG00000116641 DOCK7 664765 sc-eQTL 2.13e-01 -0.138 0.11 0.585 gdT L2
ENSG00000125703 ATG4C 569019 sc-eQTL 9.29e-01 0.00951 0.106 0.585 gdT L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 1.81e-01 0.151 0.112 0.585 gdT L2
ENSG00000162607 USP1 916854 sc-eQTL 4.03e-02 0.217 0.105 0.585 gdT L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 3.80e-01 -0.0974 0.111 0.585 gdT L2
ENSG00000079739 PGM1 -240260 sc-eQTL 8.45e-01 0.0185 0.0949 0.582 intMono L2
ENSG00000088035 ALG6 -14424 sc-eQTL 6.28e-01 0.0429 0.0884 0.582 intMono L2
ENSG00000116641 DOCK7 664765 sc-eQTL 2.59e-01 0.102 0.09 0.582 intMono L2
ENSG00000125703 ATG4C 569019 sc-eQTL 2.60e-01 -0.097 0.0859 0.582 intMono L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 1.55e-02 0.228 0.0936 0.582 intMono L2
ENSG00000162607 USP1 916854 sc-eQTL 6.44e-01 0.0447 0.0965 0.582 intMono L2
ENSG00000079739 PGM1 -240260 sc-eQTL 4.68e-01 0.0639 0.0879 0.584 ncMono L2
ENSG00000088035 ALG6 -14424 sc-eQTL 2.34e-01 -0.115 0.0964 0.584 ncMono L2
ENSG00000116641 DOCK7 664765 sc-eQTL 6.76e-01 0.0399 0.0952 0.584 ncMono L2
ENSG00000125703 ATG4C 569019 sc-eQTL 4.33e-01 0.0697 0.0888 0.584 ncMono L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 1.18e-01 0.145 0.0925 0.584 ncMono L2
ENSG00000162607 USP1 916854 sc-eQTL 7.93e-01 -0.0249 0.095 0.584 ncMono L2
ENSG00000079739 PGM1 -240260 sc-eQTL 2.47e-01 -0.12 0.103 0.596 pDC L2
ENSG00000088035 ALG6 -14424 sc-eQTL 5.24e-01 -0.0644 0.101 0.596 pDC L2
ENSG00000116641 DOCK7 664765 sc-eQTL 1.51e-01 0.148 0.102 0.596 pDC L2
ENSG00000125703 ATG4C 569019 sc-eQTL 4.64e-01 0.0677 0.0923 0.596 pDC L2
ENSG00000142856 ITGB3BP -240570 sc-eQTL 4.11e-01 0.0854 0.104 0.596 pDC L2
ENSG00000162607 USP1 916854 sc-eQTL 4.58e-01 -0.0786 0.106 0.596 pDC L2
ENSG00000203965 EFCAB7 -170221 sc-eQTL 9.11e-01 0.0103 0.0918 0.596 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -240260 sc-eQTL 1.52e-01 -0.128 0.0887 0.581 B_Memory LOneK1K
ENSG00000088035 ALG6 -14424 sc-eQTL 7.56e-01 -0.0307 0.0985 0.581 B_Memory LOneK1K
ENSG00000116641 DOCK7 664765 sc-eQTL 2.13e-01 0.106 0.0852 0.581 B_Memory LOneK1K
ENSG00000125703 ATG4C 569019 sc-eQTL 5.59e-01 -0.0405 0.0691 0.581 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -240570 sc-eQTL 2.59e-02 0.201 0.0898 0.581 B_Memory LOneK1K
ENSG00000162607 USP1 916854 sc-eQTL 9.48e-01 -0.00581 0.0882 0.581 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -170221 sc-eQTL 8.68e-03 0.247 0.0932 0.581 B_Memory LOneK1K
ENSG00000079739 PGM1 -240260 sc-eQTL 3.37e-01 -0.0884 0.0918 0.581 B_Naive LOneK1K
ENSG00000088035 ALG6 -14424 sc-eQTL 7.59e-01 -0.0291 0.0948 0.581 B_Naive LOneK1K
ENSG00000116641 DOCK7 664765 sc-eQTL 7.90e-01 0.0235 0.0885 0.581 B_Naive LOneK1K
ENSG00000125703 ATG4C 569019 sc-eQTL 3.74e-01 0.06 0.0674 0.581 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -240570 sc-eQTL 1.12e-02 0.24 0.094 0.581 B_Naive LOneK1K
ENSG00000162607 USP1 916854 sc-eQTL 1.09e-01 -0.131 0.0815 0.581 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -170221 sc-eQTL 3.48e-01 0.09 0.0958 0.581 B_Naive LOneK1K
ENSG00000079739 PGM1 -240260 sc-eQTL 2.09e-01 0.108 0.0861 0.581 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -14424 sc-eQTL 9.56e-01 0.00458 0.0837 0.581 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 664765 sc-eQTL 9.09e-01 -0.00964 0.0842 0.581 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 569019 sc-eQTL 2.26e-01 -0.0705 0.058 0.581 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -240570 sc-eQTL 5.71e-03 0.236 0.0846 0.581 CD14_Mono LOneK1K
ENSG00000162607 USP1 916854 sc-eQTL 8.67e-02 0.126 0.0731 0.581 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -240260 sc-eQTL 3.80e-01 0.0736 0.0837 0.584 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -14424 sc-eQTL 7.12e-01 -0.0352 0.0952 0.584 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 664765 sc-eQTL 2.41e-01 0.11 0.0939 0.584 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 569019 sc-eQTL 6.22e-01 -0.0397 0.0803 0.584 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -240570 sc-eQTL 6.45e-04 0.314 0.0907 0.584 CD16_Mono LOneK1K
ENSG00000162607 USP1 916854 sc-eQTL 7.10e-01 0.0325 0.0876 0.584 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -240260 sc-eQTL 9.94e-01 0.000522 0.0712 0.582 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -14424 sc-eQTL 2.21e-01 -0.105 0.0852 0.582 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 664765 sc-eQTL 1.66e-01 -0.106 0.0763 0.582 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 569019 sc-eQTL 4.64e-01 -0.0561 0.0764 0.582 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -240570 sc-eQTL 5.51e-02 0.173 0.0899 0.582 NK_CD56dim LOneK1K
ENSG00000162607 USP1 916854 sc-eQTL 8.51e-01 -0.0155 0.0823 0.582 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -170221 sc-eQTL 2.80e-02 0.219 0.099 0.582 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -240260 eQTL 2.85e-07 -0.0926 0.0179 0.0 0.0 0.429
ENSG00000125703 ATG4C 569019 eQTL 0.04 -0.0351 0.017 0.0 0.0 0.429

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -240260 1.73e-06 2.15e-06 2.59e-07 1.3e-06 4.86e-07 6.22e-07 1.3e-06 5.96e-07 1.69e-06 7.98e-07 1.81e-06 1.47e-06 2.84e-06 6.67e-07 4.8e-07 1.23e-06 1.12e-06 1.36e-06 5.66e-07 8.15e-07 6.53e-07 1.95e-06 1.6e-06 9.8e-07 2.65e-06 1.13e-06 1.1e-06 1.17e-06 1.72e-06 1.53e-06 7.32e-07 2.65e-07 4.73e-07 9.6e-07 9.11e-07 6.58e-07 7.27e-07 3.46e-07 7.04e-07 2.76e-07 1.67e-07 2.41e-06 3.9e-07 1.74e-07 3.75e-07 3.29e-07 4.63e-07 2.63e-07 2.27e-07
ENSG00000162607 \N 916854 2.77e-07 1.35e-07 5.82e-08 1.9e-07 1.03e-07 8.45e-08 1.73e-07 5.75e-08 1.5e-07 6.4e-08 1.73e-07 1.19e-07 1.71e-07 7.64e-08 5.82e-08 7.97e-08 4.18e-08 1.51e-07 6.75e-08 4.92e-08 1.25e-07 1.26e-07 1.5e-07 3.17e-08 1.68e-07 1.23e-07 1.12e-07 1.04e-07 1.24e-07 9.88e-08 1.08e-07 3.59e-08 3.51e-08 8.89e-08 3.52e-08 3.14e-08 5.59e-08 8.63e-08 6.43e-08 3.6e-08 5.54e-08 1.46e-07 5.27e-08 1.88e-08 3.81e-08 1.77e-08 1.11e-07 1.9e-09 4.8e-08