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Genes within 1Mb (chr1:63309385:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -284026 sc-eQTL 2.19e-01 0.0949 0.0769 0.462 B L1
ENSG00000088035 ALG6 -58190 sc-eQTL 4.10e-01 0.066 0.0798 0.462 B L1
ENSG00000116641 DOCK7 620999 sc-eQTL 6.27e-01 0.0389 0.0799 0.462 B L1
ENSG00000125703 ATG4C 525253 sc-eQTL 8.93e-01 -0.00751 0.0556 0.462 B L1
ENSG00000142856 ITGB3BP -284336 sc-eQTL 1.12e-02 0.223 0.0871 0.462 B L1
ENSG00000162607 USP1 873088 sc-eQTL 9.72e-02 0.127 0.0763 0.462 B L1
ENSG00000203965 EFCAB7 -213987 sc-eQTL 8.59e-02 0.155 0.09 0.462 B L1
ENSG00000079739 PGM1 -284026 sc-eQTL 8.26e-01 0.0148 0.0672 0.462 CD4T L1
ENSG00000088035 ALG6 -58190 sc-eQTL 3.21e-01 -0.0736 0.074 0.462 CD4T L1
ENSG00000116641 DOCK7 620999 sc-eQTL 6.82e-01 0.0308 0.0751 0.462 CD4T L1
ENSG00000125703 ATG4C 525253 sc-eQTL 3.07e-01 0.062 0.0605 0.462 CD4T L1
ENSG00000142856 ITGB3BP -284336 sc-eQTL 5.21e-02 0.167 0.0853 0.462 CD4T L1
ENSG00000162607 USP1 873088 sc-eQTL 2.21e-01 0.072 0.0586 0.462 CD4T L1
ENSG00000203965 EFCAB7 -213987 sc-eQTL 5.94e-01 0.0413 0.0772 0.462 CD4T L1
ENSG00000079739 PGM1 -284026 sc-eQTL 2.95e-01 0.0771 0.0735 0.462 CD8T L1
ENSG00000088035 ALG6 -58190 sc-eQTL 1.25e-01 -0.124 0.0807 0.462 CD8T L1
ENSG00000116641 DOCK7 620999 sc-eQTL 1.49e-02 0.199 0.0811 0.462 CD8T L1
ENSG00000125703 ATG4C 525253 sc-eQTL 9.24e-01 -0.0075 0.0781 0.462 CD8T L1
ENSG00000142856 ITGB3BP -284336 sc-eQTL 1.57e-02 0.21 0.0862 0.462 CD8T L1
ENSG00000162607 USP1 873088 sc-eQTL 9.02e-02 0.115 0.0676 0.462 CD8T L1
ENSG00000203965 EFCAB7 -213987 sc-eQTL 8.63e-01 0.0151 0.0871 0.462 CD8T L1
ENSG00000079739 PGM1 -284026 sc-eQTL 4.88e-01 0.0557 0.0801 0.459 DC L1
ENSG00000088035 ALG6 -58190 sc-eQTL 5.14e-01 -0.0541 0.0826 0.459 DC L1
ENSG00000116641 DOCK7 620999 sc-eQTL 1.83e-01 0.113 0.0844 0.459 DC L1
ENSG00000125703 ATG4C 525253 sc-eQTL 2.99e-01 0.0689 0.0662 0.459 DC L1
ENSG00000142856 ITGB3BP -284336 sc-eQTL 2.90e-02 0.202 0.0916 0.459 DC L1
ENSG00000162607 USP1 873088 sc-eQTL 8.37e-01 -0.0167 0.081 0.459 DC L1
ENSG00000203965 EFCAB7 -213987 sc-eQTL 7.00e-01 0.0312 0.0807 0.459 DC L1
ENSG00000079739 PGM1 -284026 sc-eQTL 5.27e-01 0.0518 0.0816 0.462 Mono L1
ENSG00000088035 ALG6 -58190 sc-eQTL 2.91e-01 -0.09 0.085 0.462 Mono L1
ENSG00000116641 DOCK7 620999 sc-eQTL 9.34e-01 0.00688 0.0825 0.462 Mono L1
ENSG00000125703 ATG4C 525253 sc-eQTL 8.06e-01 -0.0137 0.0557 0.462 Mono L1
ENSG00000142856 ITGB3BP -284336 sc-eQTL 1.01e-02 0.225 0.0867 0.462 Mono L1
ENSG00000162607 USP1 873088 sc-eQTL 6.23e-01 0.0356 0.0723 0.462 Mono L1
ENSG00000079739 PGM1 -284026 sc-eQTL 1.46e-01 0.099 0.0679 0.459 NK L1
ENSG00000088035 ALG6 -58190 sc-eQTL 7.17e-01 0.029 0.08 0.459 NK L1
ENSG00000116641 DOCK7 620999 sc-eQTL 7.92e-01 0.0174 0.0659 0.459 NK L1
ENSG00000125703 ATG4C 525253 sc-eQTL 1.14e-01 0.112 0.0704 0.459 NK L1
ENSG00000142856 ITGB3BP -284336 sc-eQTL 7.54e-02 0.156 0.0873 0.459 NK L1
ENSG00000162607 USP1 873088 sc-eQTL 4.31e-01 0.0619 0.0785 0.459 NK L1
ENSG00000203965 EFCAB7 -213987 sc-eQTL 9.44e-01 -0.00671 0.0955 0.459 NK L1
ENSG00000079739 PGM1 -284026 sc-eQTL 2.19e-01 -0.0947 0.0768 0.462 Other_T L1
ENSG00000088035 ALG6 -58190 sc-eQTL 2.03e-02 -0.179 0.0764 0.462 Other_T L1
ENSG00000116641 DOCK7 620999 sc-eQTL 7.15e-01 -0.0289 0.079 0.462 Other_T L1
ENSG00000125703 ATG4C 525253 sc-eQTL 2.07e-01 0.0863 0.0681 0.462 Other_T L1
ENSG00000142856 ITGB3BP -284336 sc-eQTL 8.76e-02 -0.103 0.0602 0.462 Other_T L1
ENSG00000162607 USP1 873088 sc-eQTL 2.74e-01 -0.0575 0.0524 0.462 Other_T L1
ENSG00000203965 EFCAB7 -213987 sc-eQTL 8.89e-01 0.0131 0.0936 0.462 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -284026 sc-eQTL 5.85e-01 0.0562 0.103 0.462 B_Activated L2
ENSG00000088035 ALG6 -58190 sc-eQTL 7.04e-01 -0.0375 0.0984 0.462 B_Activated L2
ENSG00000116641 DOCK7 620999 sc-eQTL 1.54e-01 -0.13 0.0911 0.462 B_Activated L2
ENSG00000125703 ATG4C 525253 sc-eQTL 2.84e-01 -0.103 0.0961 0.462 B_Activated L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 3.59e-01 0.0864 0.0939 0.462 B_Activated L2
ENSG00000162607 USP1 873088 sc-eQTL 3.26e-01 0.1 0.102 0.462 B_Activated L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 2.59e-01 0.101 0.0888 0.462 B_Activated L2
ENSG00000079739 PGM1 -284026 sc-eQTL 5.83e-01 -0.0509 0.0926 0.464 B_Intermediate L2
ENSG00000088035 ALG6 -58190 sc-eQTL 4.85e-01 0.0658 0.0941 0.464 B_Intermediate L2
ENSG00000116641 DOCK7 620999 sc-eQTL 7.55e-01 -0.0281 0.0899 0.464 B_Intermediate L2
ENSG00000125703 ATG4C 525253 sc-eQTL 3.60e-01 0.0697 0.076 0.464 B_Intermediate L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 7.10e-02 0.163 0.09 0.464 B_Intermediate L2
ENSG00000162607 USP1 873088 sc-eQTL 2.76e-01 0.0985 0.0903 0.464 B_Intermediate L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 8.65e-01 0.0153 0.0898 0.464 B_Intermediate L2
ENSG00000079739 PGM1 -284026 sc-eQTL 2.89e-01 0.0978 0.092 0.466 B_Memory L2
ENSG00000088035 ALG6 -58190 sc-eQTL 9.62e-01 0.00453 0.0938 0.466 B_Memory L2
ENSG00000116641 DOCK7 620999 sc-eQTL 9.81e-01 -0.00215 0.088 0.466 B_Memory L2
ENSG00000125703 ATG4C 525253 sc-eQTL 3.29e-01 0.0816 0.0834 0.466 B_Memory L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 7.60e-02 0.169 0.0949 0.466 B_Memory L2
ENSG00000162607 USP1 873088 sc-eQTL 6.43e-01 0.0447 0.0964 0.466 B_Memory L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 1.58e-01 0.134 0.0945 0.466 B_Memory L2
ENSG00000079739 PGM1 -284026 sc-eQTL 3.59e-01 -0.0846 0.0919 0.462 B_Naive1 L2
ENSG00000088035 ALG6 -58190 sc-eQTL 5.84e-01 0.0507 0.0924 0.462 B_Naive1 L2
ENSG00000116641 DOCK7 620999 sc-eQTL 7.94e-01 -0.0231 0.0886 0.462 B_Naive1 L2
ENSG00000125703 ATG4C 525253 sc-eQTL 7.24e-01 0.0241 0.0682 0.462 B_Naive1 L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 1.71e-02 0.215 0.0893 0.462 B_Naive1 L2
ENSG00000162607 USP1 873088 sc-eQTL 3.97e-01 0.0675 0.0795 0.462 B_Naive1 L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 8.11e-02 0.168 0.0959 0.462 B_Naive1 L2
ENSG00000079739 PGM1 -284026 sc-eQTL 1.14e-01 0.142 0.0897 0.464 B_Naive2 L2
ENSG00000088035 ALG6 -58190 sc-eQTL 5.70e-01 0.0535 0.094 0.464 B_Naive2 L2
ENSG00000116641 DOCK7 620999 sc-eQTL 9.01e-01 0.0113 0.0905 0.464 B_Naive2 L2
ENSG00000125703 ATG4C 525253 sc-eQTL 6.34e-01 -0.0415 0.087 0.464 B_Naive2 L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 6.09e-01 0.0484 0.0944 0.464 B_Naive2 L2
ENSG00000162607 USP1 873088 sc-eQTL 1.65e-01 0.125 0.0895 0.464 B_Naive2 L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 6.64e-01 -0.0408 0.0939 0.464 B_Naive2 L2
ENSG00000079739 PGM1 -284026 sc-eQTL 4.35e-01 0.0713 0.0912 0.459 CD4_CTL L2
ENSG00000088035 ALG6 -58190 sc-eQTL 2.56e-01 0.11 0.0962 0.459 CD4_CTL L2
ENSG00000116641 DOCK7 620999 sc-eQTL 5.65e-01 0.0486 0.0843 0.459 CD4_CTL L2
ENSG00000125703 ATG4C 525253 sc-eQTL 7.32e-01 0.0299 0.0873 0.459 CD4_CTL L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 9.58e-01 0.00497 0.0934 0.459 CD4_CTL L2
ENSG00000162607 USP1 873088 sc-eQTL 8.21e-02 0.154 0.0882 0.459 CD4_CTL L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 1.34e-01 -0.133 0.0883 0.459 CD4_CTL L2
ENSG00000079739 PGM1 -284026 sc-eQTL 3.80e-01 -0.0663 0.0754 0.462 CD4_Naive L2
ENSG00000088035 ALG6 -58190 sc-eQTL 4.24e-01 -0.0656 0.0819 0.462 CD4_Naive L2
ENSG00000116641 DOCK7 620999 sc-eQTL 9.33e-01 0.00678 0.0806 0.462 CD4_Naive L2
ENSG00000125703 ATG4C 525253 sc-eQTL 2.57e-01 0.0807 0.0711 0.462 CD4_Naive L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 1.83e-01 0.116 0.0868 0.462 CD4_Naive L2
ENSG00000162607 USP1 873088 sc-eQTL 4.42e-02 0.133 0.0659 0.462 CD4_Naive L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 1.73e-01 0.118 0.0861 0.462 CD4_Naive L2
ENSG00000079739 PGM1 -284026 sc-eQTL 5.42e-01 0.0475 0.0778 0.462 CD4_TCM L2
ENSG00000088035 ALG6 -58190 sc-eQTL 4.45e-01 0.0691 0.0903 0.462 CD4_TCM L2
ENSG00000116641 DOCK7 620999 sc-eQTL 3.02e-01 0.0827 0.08 0.462 CD4_TCM L2
ENSG00000125703 ATG4C 525253 sc-eQTL 7.90e-01 0.0208 0.078 0.462 CD4_TCM L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 1.04e-02 0.234 0.0906 0.462 CD4_TCM L2
ENSG00000162607 USP1 873088 sc-eQTL 8.69e-01 0.0124 0.0754 0.462 CD4_TCM L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 6.21e-01 -0.0441 0.089 0.462 CD4_TCM L2
ENSG00000079739 PGM1 -284026 sc-eQTL 2.09e-01 0.117 0.0927 0.462 CD4_TEM L2
ENSG00000088035 ALG6 -58190 sc-eQTL 1.70e-01 -0.128 0.0931 0.462 CD4_TEM L2
ENSG00000116641 DOCK7 620999 sc-eQTL 8.93e-01 -0.0123 0.0911 0.462 CD4_TEM L2
ENSG00000125703 ATG4C 525253 sc-eQTL 7.75e-01 0.0253 0.0885 0.462 CD4_TEM L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 4.20e-01 0.0738 0.0912 0.462 CD4_TEM L2
ENSG00000162607 USP1 873088 sc-eQTL 3.12e-01 0.0875 0.0864 0.462 CD4_TEM L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 4.92e-01 -0.0651 0.0946 0.462 CD4_TEM L2
ENSG00000079739 PGM1 -284026 sc-eQTL 5.10e-01 0.0549 0.0832 0.462 CD8_CTL L2
ENSG00000088035 ALG6 -58190 sc-eQTL 1.14e-01 -0.14 0.088 0.462 CD8_CTL L2
ENSG00000116641 DOCK7 620999 sc-eQTL 1.46e-02 0.204 0.0828 0.462 CD8_CTL L2
ENSG00000125703 ATG4C 525253 sc-eQTL 5.62e-01 -0.0519 0.0893 0.462 CD8_CTL L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 2.70e-01 0.103 0.0927 0.462 CD8_CTL L2
ENSG00000162607 USP1 873088 sc-eQTL 9.45e-01 -0.00577 0.0833 0.462 CD8_CTL L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 6.63e-01 -0.0416 0.0952 0.462 CD8_CTL L2
ENSG00000079739 PGM1 -284026 sc-eQTL 5.38e-01 0.0522 0.0846 0.462 CD8_Naive L2
ENSG00000088035 ALG6 -58190 sc-eQTL 3.07e-01 -0.0894 0.0874 0.462 CD8_Naive L2
ENSG00000116641 DOCK7 620999 sc-eQTL 5.88e-02 0.171 0.0898 0.462 CD8_Naive L2
ENSG00000125703 ATG4C 525253 sc-eQTL 5.60e-01 0.0508 0.0869 0.462 CD8_Naive L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 5.05e-03 0.245 0.0864 0.462 CD8_Naive L2
ENSG00000162607 USP1 873088 sc-eQTL 1.59e-01 0.105 0.0741 0.462 CD8_Naive L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 6.22e-02 0.154 0.0823 0.462 CD8_Naive L2
ENSG00000079739 PGM1 -284026 sc-eQTL 7.76e-01 0.0265 0.093 0.47 CD8_TCM L2
ENSG00000088035 ALG6 -58190 sc-eQTL 3.21e-01 0.0934 0.0939 0.47 CD8_TCM L2
ENSG00000116641 DOCK7 620999 sc-eQTL 9.94e-02 -0.151 0.0912 0.47 CD8_TCM L2
ENSG00000125703 ATG4C 525253 sc-eQTL 5.01e-02 -0.183 0.0931 0.47 CD8_TCM L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 1.28e-01 0.139 0.0908 0.47 CD8_TCM L2
ENSG00000162607 USP1 873088 sc-eQTL 1.37e-01 0.131 0.0874 0.47 CD8_TCM L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 2.61e-01 0.105 0.0928 0.47 CD8_TCM L2
ENSG00000079739 PGM1 -284026 sc-eQTL 5.93e-01 0.0495 0.0925 0.466 CD8_TEM L2
ENSG00000088035 ALG6 -58190 sc-eQTL 4.77e-01 -0.0662 0.0928 0.466 CD8_TEM L2
ENSG00000116641 DOCK7 620999 sc-eQTL 9.70e-01 -0.00344 0.0901 0.466 CD8_TEM L2
ENSG00000125703 ATG4C 525253 sc-eQTL 8.13e-01 -0.0205 0.0866 0.466 CD8_TEM L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 3.71e-01 0.0839 0.0936 0.466 CD8_TEM L2
ENSG00000162607 USP1 873088 sc-eQTL 8.45e-01 0.0175 0.0894 0.466 CD8_TEM L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 8.85e-01 0.0132 0.0909 0.466 CD8_TEM L2
ENSG00000079739 PGM1 -284026 sc-eQTL 7.42e-01 -0.0291 0.0882 0.461 MAIT L2
ENSG00000088035 ALG6 -58190 sc-eQTL 9.62e-01 0.00421 0.0873 0.461 MAIT L2
ENSG00000116641 DOCK7 620999 sc-eQTL 4.28e-01 -0.0663 0.0835 0.461 MAIT L2
ENSG00000125703 ATG4C 525253 sc-eQTL 7.96e-01 0.0229 0.0882 0.461 MAIT L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 7.04e-02 -0.159 0.0877 0.461 MAIT L2
ENSG00000162607 USP1 873088 sc-eQTL 3.19e-01 -0.0874 0.0875 0.461 MAIT L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 5.38e-01 -0.0561 0.0909 0.461 MAIT L2
ENSG00000079739 PGM1 -284026 sc-eQTL 9.11e-01 0.0102 0.0913 0.453 NK_CD56bright L2
ENSG00000088035 ALG6 -58190 sc-eQTL 8.94e-01 -0.0125 0.0936 0.453 NK_CD56bright L2
ENSG00000116641 DOCK7 620999 sc-eQTL 5.76e-01 -0.0454 0.0811 0.453 NK_CD56bright L2
ENSG00000125703 ATG4C 525253 sc-eQTL 8.92e-01 0.0123 0.0906 0.453 NK_CD56bright L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 9.57e-02 0.157 0.0937 0.453 NK_CD56bright L2
ENSG00000162607 USP1 873088 sc-eQTL 6.45e-01 0.0449 0.0973 0.453 NK_CD56bright L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 8.79e-01 -0.0142 0.0931 0.453 NK_CD56bright L2
ENSG00000079739 PGM1 -284026 sc-eQTL 6.02e-01 0.0369 0.0708 0.457 NK_CD56dim L2
ENSG00000088035 ALG6 -58190 sc-eQTL 3.71e-01 0.0804 0.0897 0.457 NK_CD56dim L2
ENSG00000116641 DOCK7 620999 sc-eQTL 5.71e-01 0.0444 0.0782 0.457 NK_CD56dim L2
ENSG00000125703 ATG4C 525253 sc-eQTL 3.49e-01 -0.0744 0.0793 0.457 NK_CD56dim L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 3.02e-01 0.0933 0.0902 0.457 NK_CD56dim L2
ENSG00000162607 USP1 873088 sc-eQTL 2.03e-01 0.112 0.0874 0.457 NK_CD56dim L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 7.50e-01 0.0312 0.0977 0.457 NK_CD56dim L2
ENSG00000079739 PGM1 -284026 sc-eQTL 9.34e-01 0.00799 0.0967 0.459 NK_HLA L2
ENSG00000088035 ALG6 -58190 sc-eQTL 5.75e-02 -0.19 0.0994 0.459 NK_HLA L2
ENSG00000116641 DOCK7 620999 sc-eQTL 2.57e-01 0.0869 0.0764 0.459 NK_HLA L2
ENSG00000125703 ATG4C 525253 sc-eQTL 5.98e-01 -0.0471 0.0891 0.459 NK_HLA L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 7.90e-01 0.0249 0.0936 0.459 NK_HLA L2
ENSG00000162607 USP1 873088 sc-eQTL 5.33e-01 0.0612 0.0979 0.459 NK_HLA L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 6.54e-01 -0.04 0.0892 0.459 NK_HLA L2
ENSG00000079739 PGM1 -284026 sc-eQTL 4.95e-01 0.0525 0.0768 0.457 NK_cytokine L2
ENSG00000088035 ALG6 -58190 sc-eQTL 5.77e-01 0.0486 0.0869 0.457 NK_cytokine L2
ENSG00000116641 DOCK7 620999 sc-eQTL 2.67e-01 0.0893 0.0803 0.457 NK_cytokine L2
ENSG00000125703 ATG4C 525253 sc-eQTL 2.03e-03 0.252 0.0805 0.457 NK_cytokine L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 7.31e-02 0.152 0.0847 0.457 NK_cytokine L2
ENSG00000162607 USP1 873088 sc-eQTL 3.27e-01 -0.088 0.0895 0.457 NK_cytokine L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 5.34e-01 -0.0565 0.0908 0.457 NK_cytokine L2
ENSG00000079739 PGM1 -284026 sc-eQTL 7.26e-01 0.0391 0.111 0.456 PB L2
ENSG00000088035 ALG6 -58190 sc-eQTL 1.89e-01 -0.153 0.116 0.456 PB L2
ENSG00000116641 DOCK7 620999 sc-eQTL 8.31e-01 0.0268 0.125 0.456 PB L2
ENSG00000125703 ATG4C 525253 sc-eQTL 5.89e-01 -0.059 0.109 0.456 PB L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 1.58e-01 0.153 0.108 0.456 PB L2
ENSG00000162607 USP1 873088 sc-eQTL 5.13e-02 -0.21 0.107 0.456 PB L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 4.48e-01 0.0908 0.119 0.456 PB L2
ENSG00000079739 PGM1 -284026 sc-eQTL 4.39e-01 -0.066 0.0851 0.461 Pro_T L2
ENSG00000088035 ALG6 -58190 sc-eQTL 6.10e-01 -0.0443 0.0867 0.461 Pro_T L2
ENSG00000116641 DOCK7 620999 sc-eQTL 4.55e-01 0.0651 0.0869 0.461 Pro_T L2
ENSG00000125703 ATG4C 525253 sc-eQTL 8.84e-01 -0.0111 0.0762 0.461 Pro_T L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 7.48e-01 0.0246 0.0764 0.461 Pro_T L2
ENSG00000162607 USP1 873088 sc-eQTL 3.80e-01 -0.0462 0.0524 0.461 Pro_T L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 9.20e-01 0.00892 0.0888 0.461 Pro_T L2
ENSG00000079739 PGM1 -284026 sc-eQTL 2.07e-02 0.205 0.088 0.462 Treg L2
ENSG00000088035 ALG6 -58190 sc-eQTL 5.36e-02 -0.183 0.0945 0.462 Treg L2
ENSG00000116641 DOCK7 620999 sc-eQTL 1.53e-01 0.125 0.0871 0.462 Treg L2
ENSG00000125703 ATG4C 525253 sc-eQTL 3.86e-01 -0.0775 0.0893 0.462 Treg L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 3.56e-02 0.196 0.0926 0.462 Treg L2
ENSG00000162607 USP1 873088 sc-eQTL 4.68e-01 -0.0658 0.0904 0.462 Treg L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 6.83e-01 0.0367 0.0895 0.462 Treg L2
ENSG00000079739 PGM1 -284026 sc-eQTL 2.25e-01 -0.108 0.089 0.454 cDC L2
ENSG00000088035 ALG6 -58190 sc-eQTL 1.49e-01 0.131 0.0901 0.454 cDC L2
ENSG00000116641 DOCK7 620999 sc-eQTL 5.10e-01 0.0587 0.0888 0.454 cDC L2
ENSG00000125703 ATG4C 525253 sc-eQTL 6.41e-01 0.0361 0.0772 0.454 cDC L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 5.05e-01 0.0653 0.0978 0.454 cDC L2
ENSG00000162607 USP1 873088 sc-eQTL 5.35e-01 -0.0542 0.0871 0.454 cDC L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 1.70e-01 0.108 0.0783 0.454 cDC L2
ENSG00000079739 PGM1 -284026 sc-eQTL 9.20e-01 0.00839 0.0839 0.462 cMono_IL1B L2
ENSG00000088035 ALG6 -58190 sc-eQTL 2.25e-01 -0.102 0.0837 0.462 cMono_IL1B L2
ENSG00000116641 DOCK7 620999 sc-eQTL 5.25e-01 -0.0564 0.0885 0.462 cMono_IL1B L2
ENSG00000125703 ATG4C 525253 sc-eQTL 7.37e-01 -0.021 0.0623 0.462 cMono_IL1B L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 1.40e-01 0.13 0.0878 0.462 cMono_IL1B L2
ENSG00000162607 USP1 873088 sc-eQTL 8.49e-01 0.0148 0.0778 0.462 cMono_IL1B L2
ENSG00000079739 PGM1 -284026 sc-eQTL 4.43e-01 0.0715 0.093 0.462 cMono_S100A L2
ENSG00000088035 ALG6 -58190 sc-eQTL 5.50e-01 0.0564 0.0943 0.462 cMono_S100A L2
ENSG00000116641 DOCK7 620999 sc-eQTL 7.71e-01 -0.0255 0.0875 0.462 cMono_S100A L2
ENSG00000125703 ATG4C 525253 sc-eQTL 6.72e-01 0.0321 0.0757 0.462 cMono_S100A L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 8.02e-04 0.283 0.0832 0.462 cMono_S100A L2
ENSG00000162607 USP1 873088 sc-eQTL 9.47e-02 0.147 0.0874 0.462 cMono_S100A L2
ENSG00000079739 PGM1 -284026 sc-eQTL 6.62e-01 -0.0443 0.101 0.482 gdT L2
ENSG00000088035 ALG6 -58190 sc-eQTL 6.70e-03 -0.29 0.105 0.482 gdT L2
ENSG00000116641 DOCK7 620999 sc-eQTL 5.81e-01 0.0586 0.106 0.482 gdT L2
ENSG00000125703 ATG4C 525253 sc-eQTL 1.44e-01 0.147 0.1 0.482 gdT L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 8.52e-02 -0.184 0.106 0.482 gdT L2
ENSG00000162607 USP1 873088 sc-eQTL 6.56e-01 0.0453 0.102 0.482 gdT L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 5.10e-01 0.0698 0.106 0.482 gdT L2
ENSG00000079739 PGM1 -284026 sc-eQTL 4.60e-01 0.0686 0.0927 0.456 intMono L2
ENSG00000088035 ALG6 -58190 sc-eQTL 5.24e-01 -0.0551 0.0864 0.456 intMono L2
ENSG00000116641 DOCK7 620999 sc-eQTL 6.00e-01 -0.0463 0.0883 0.456 intMono L2
ENSG00000125703 ATG4C 525253 sc-eQTL 4.11e-01 -0.0693 0.0842 0.456 intMono L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 3.12e-01 0.0938 0.0926 0.456 intMono L2
ENSG00000162607 USP1 873088 sc-eQTL 7.25e-01 0.0333 0.0944 0.456 intMono L2
ENSG00000079739 PGM1 -284026 sc-eQTL 4.55e-01 0.0628 0.0839 0.45 ncMono L2
ENSG00000088035 ALG6 -58190 sc-eQTL 2.81e-01 -0.0996 0.0921 0.45 ncMono L2
ENSG00000116641 DOCK7 620999 sc-eQTL 9.21e-01 0.00902 0.0909 0.45 ncMono L2
ENSG00000125703 ATG4C 525253 sc-eQTL 8.62e-01 0.0147 0.0849 0.45 ncMono L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 5.91e-01 0.0478 0.0887 0.45 ncMono L2
ENSG00000162607 USP1 873088 sc-eQTL 3.18e-01 -0.0906 0.0905 0.45 ncMono L2
ENSG00000079739 PGM1 -284026 sc-eQTL 7.10e-01 0.0374 0.101 0.455 pDC L2
ENSG00000088035 ALG6 -58190 sc-eQTL 2.57e-02 -0.217 0.0963 0.455 pDC L2
ENSG00000116641 DOCK7 620999 sc-eQTL 4.17e-01 0.0813 0.0998 0.455 pDC L2
ENSG00000125703 ATG4C 525253 sc-eQTL 3.70e-01 0.0804 0.0895 0.455 pDC L2
ENSG00000142856 ITGB3BP -284336 sc-eQTL 2.51e-02 0.224 0.0991 0.455 pDC L2
ENSG00000162607 USP1 873088 sc-eQTL 7.58e-01 -0.0316 0.103 0.455 pDC L2
ENSG00000203965 EFCAB7 -213987 sc-eQTL 3.78e-01 -0.0786 0.0889 0.455 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -284026 sc-eQTL 4.64e-01 0.0633 0.0862 0.462 B_Memory LOneK1K
ENSG00000088035 ALG6 -58190 sc-eQTL 2.88e-01 0.101 0.0952 0.462 B_Memory LOneK1K
ENSG00000116641 DOCK7 620999 sc-eQTL 5.56e-01 -0.0488 0.0828 0.462 B_Memory LOneK1K
ENSG00000125703 ATG4C 525253 sc-eQTL 4.23e-01 0.0537 0.0669 0.462 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -284336 sc-eQTL 1.23e-02 0.219 0.0867 0.462 B_Memory LOneK1K
ENSG00000162607 USP1 873088 sc-eQTL 2.29e-01 0.103 0.0852 0.462 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -213987 sc-eQTL 1.17e-01 0.144 0.0912 0.462 B_Memory LOneK1K
ENSG00000079739 PGM1 -284026 sc-eQTL 6.12e-01 0.0453 0.0891 0.462 B_Naive LOneK1K
ENSG00000088035 ALG6 -58190 sc-eQTL 7.36e-01 0.031 0.0918 0.462 B_Naive LOneK1K
ENSG00000116641 DOCK7 620999 sc-eQTL 6.56e-01 0.0382 0.0857 0.462 B_Naive LOneK1K
ENSG00000125703 ATG4C 525253 sc-eQTL 9.84e-01 -0.00133 0.0654 0.462 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -284336 sc-eQTL 3.30e-02 0.196 0.0915 0.462 B_Naive LOneK1K
ENSG00000162607 USP1 873088 sc-eQTL 3.29e-01 0.0775 0.0793 0.462 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -213987 sc-eQTL 1.84e-01 0.123 0.0926 0.462 B_Naive LOneK1K
ENSG00000079739 PGM1 -284026 sc-eQTL 5.35e-01 0.0534 0.0859 0.462 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -58190 sc-eQTL 3.43e-01 -0.0789 0.0831 0.462 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 620999 sc-eQTL 4.73e-01 -0.0602 0.0838 0.462 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 525253 sc-eQTL 9.87e-01 0.000911 0.058 0.462 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -284336 sc-eQTL 5.45e-03 0.236 0.0842 0.462 CD14_Mono LOneK1K
ENSG00000162607 USP1 873088 sc-eQTL 3.87e-01 0.0633 0.0731 0.462 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -284026 sc-eQTL 3.82e-01 0.0716 0.0816 0.459 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -58190 sc-eQTL 2.58e-01 -0.105 0.0925 0.459 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 620999 sc-eQTL 7.23e-01 -0.0326 0.0918 0.459 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 525253 sc-eQTL 8.34e-01 -0.0165 0.0783 0.459 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -284336 sc-eQTL 4.19e-01 0.0735 0.0908 0.459 CD16_Mono LOneK1K
ENSG00000162607 USP1 873088 sc-eQTL 2.33e-01 -0.102 0.0851 0.459 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -284026 sc-eQTL 2.08e-01 0.0874 0.0692 0.457 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -58190 sc-eQTL 8.02e-01 0.021 0.0834 0.457 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 620999 sc-eQTL 5.98e-01 0.0395 0.0747 0.457 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 525253 sc-eQTL 1.76e-01 0.101 0.0743 0.457 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -284336 sc-eQTL 1.23e-01 0.136 0.0879 0.457 NK_CD56dim LOneK1K
ENSG00000162607 USP1 873088 sc-eQTL 7.15e-01 0.0293 0.0803 0.457 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -213987 sc-eQTL 9.11e-01 0.0109 0.0977 0.457 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000142856 ITGB3BP -284336 eQTL 1.43e-08 0.164 0.0286 0.0 0.0 0.468

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116652 \N -237697 1.3e-06 1.24e-06 2.95e-07 1.2e-06 3.88e-07 5.83e-07 1.47e-06 4.2e-07 1.66e-06 6.2e-07 2.07e-06 8.56e-07 2.52e-06 2.95e-07 4.87e-07 9.7e-07 9.18e-07 1.06e-06 7.08e-07 4.83e-07 7.86e-07 1.91e-06 1.1e-06 6.29e-07 2.41e-06 7.53e-07 1.04e-06 8.48e-07 1.53e-06 1.28e-06 8.51e-07 3.03e-07 3.32e-07 5.73e-07 5.76e-07 4.86e-07 6.93e-07 3.18e-07 4.87e-07 2.09e-07 3.35e-07 1.88e-06 1.53e-07 1.74e-07 2.85e-07 2.13e-07 2.28e-07 9.32e-08 2.4e-07
ENSG00000142856 ITGB3BP -284336 1.27e-06 1.01e-06 3.29e-07 6.42e-07 3.51e-07 4.57e-07 1.26e-06 3.52e-07 1.32e-06 4.28e-07 1.48e-06 6.08e-07 2e-06 2.8e-07 5.65e-07 8.12e-07 7.87e-07 6.1e-07 6.96e-07 6.96e-07 5.66e-07 1.33e-06 9.26e-07 6.23e-07 2.06e-06 4.27e-07 7.66e-07 6.93e-07 1.25e-06 1.28e-06 5.88e-07 1.55e-07 2.08e-07 5.82e-07 4.63e-07 4.74e-07 5.17e-07 1.69e-07 3.52e-07 2.5e-07 2.87e-07 1.51e-06 5.77e-08 1.06e-07 1.66e-07 1.22e-07 2.3e-07 8.37e-08 1.23e-07