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Genes within 1Mb (chr1:63256129:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -337282 sc-eQTL 8.12e-02 -0.139 0.0791 0.288 B L1
ENSG00000088035 ALG6 -111446 sc-eQTL 1.66e-02 -0.197 0.0814 0.288 B L1
ENSG00000116641 DOCK7 567743 sc-eQTL 6.64e-01 0.0359 0.0825 0.288 B L1
ENSG00000125703 ATG4C 471997 sc-eQTL 8.85e-01 -0.00829 0.0574 0.288 B L1
ENSG00000142856 ITGB3BP -337592 sc-eQTL 6.17e-01 -0.0457 0.0912 0.288 B L1
ENSG00000162607 USP1 819832 sc-eQTL 6.05e-01 -0.041 0.0792 0.288 B L1
ENSG00000203965 EFCAB7 -267243 sc-eQTL 8.17e-01 -0.0217 0.0935 0.288 B L1
ENSG00000079739 PGM1 -337282 sc-eQTL 5.46e-01 -0.0408 0.0674 0.288 CD4T L1
ENSG00000088035 ALG6 -111446 sc-eQTL 2.13e-01 0.0926 0.0742 0.288 CD4T L1
ENSG00000116641 DOCK7 567743 sc-eQTL 6.53e-01 0.0339 0.0753 0.288 CD4T L1
ENSG00000125703 ATG4C 471997 sc-eQTL 3.31e-01 0.0591 0.0607 0.288 CD4T L1
ENSG00000142856 ITGB3BP -337592 sc-eQTL 1.28e-01 -0.131 0.0859 0.288 CD4T L1
ENSG00000162607 USP1 819832 sc-eQTL 8.36e-01 0.0122 0.059 0.288 CD4T L1
ENSG00000203965 EFCAB7 -267243 sc-eQTL 3.67e-01 0.0699 0.0774 0.288 CD4T L1
ENSG00000079739 PGM1 -337282 sc-eQTL 1.70e-01 -0.104 0.0752 0.288 CD8T L1
ENSG00000088035 ALG6 -111446 sc-eQTL 4.82e-01 0.0586 0.0832 0.288 CD8T L1
ENSG00000116641 DOCK7 567743 sc-eQTL 1.82e-01 0.113 0.084 0.288 CD8T L1
ENSG00000125703 ATG4C 471997 sc-eQTL 7.83e-01 -0.0221 0.0802 0.288 CD8T L1
ENSG00000142856 ITGB3BP -337592 sc-eQTL 8.83e-01 0.0132 0.0897 0.288 CD8T L1
ENSG00000162607 USP1 819832 sc-eQTL 2.34e-01 -0.083 0.0696 0.288 CD8T L1
ENSG00000203965 EFCAB7 -267243 sc-eQTL 9.23e-01 0.00863 0.0894 0.288 CD8T L1
ENSG00000079739 PGM1 -337282 sc-eQTL 7.38e-01 0.0285 0.085 0.284 DC L1
ENSG00000088035 ALG6 -111446 sc-eQTL 8.52e-01 0.0164 0.0877 0.284 DC L1
ENSG00000116641 DOCK7 567743 sc-eQTL 4.88e-01 0.0623 0.0898 0.284 DC L1
ENSG00000125703 ATG4C 471997 sc-eQTL 3.60e-02 0.147 0.0696 0.284 DC L1
ENSG00000142856 ITGB3BP -337592 sc-eQTL 5.13e-01 -0.0644 0.0982 0.284 DC L1
ENSG00000162607 USP1 819832 sc-eQTL 3.76e-01 -0.0761 0.0857 0.284 DC L1
ENSG00000203965 EFCAB7 -267243 sc-eQTL 5.50e-01 0.0512 0.0855 0.284 DC L1
ENSG00000079739 PGM1 -337282 sc-eQTL 7.33e-01 -0.0281 0.082 0.288 Mono L1
ENSG00000088035 ALG6 -111446 sc-eQTL 6.36e-01 0.0405 0.0856 0.288 Mono L1
ENSG00000116641 DOCK7 567743 sc-eQTL 3.73e-01 0.0738 0.0827 0.288 Mono L1
ENSG00000125703 ATG4C 471997 sc-eQTL 9.93e-01 -0.000512 0.056 0.288 Mono L1
ENSG00000142856 ITGB3BP -337592 sc-eQTL 9.05e-01 -0.0106 0.0885 0.288 Mono L1
ENSG00000162607 USP1 819832 sc-eQTL 3.61e-01 -0.0664 0.0725 0.288 Mono L1
ENSG00000079739 PGM1 -337282 sc-eQTL 8.11e-01 0.0167 0.0697 0.288 NK L1
ENSG00000088035 ALG6 -111446 sc-eQTL 7.26e-01 -0.0286 0.0817 0.288 NK L1
ENSG00000116641 DOCK7 567743 sc-eQTL 3.48e-01 0.0632 0.0672 0.288 NK L1
ENSG00000125703 ATG4C 471997 sc-eQTL 5.59e-01 -0.0423 0.0722 0.288 NK L1
ENSG00000142856 ITGB3BP -337592 sc-eQTL 5.83e-01 0.0493 0.0898 0.288 NK L1
ENSG00000162607 USP1 819832 sc-eQTL 9.63e-01 0.00371 0.0803 0.288 NK L1
ENSG00000203965 EFCAB7 -267243 sc-eQTL 4.42e-01 -0.0751 0.0974 0.288 NK L1
ENSG00000079739 PGM1 -337282 sc-eQTL 6.53e-01 -0.0359 0.0798 0.288 Other_T L1
ENSG00000088035 ALG6 -111446 sc-eQTL 3.80e-01 -0.0704 0.0801 0.288 Other_T L1
ENSG00000116641 DOCK7 567743 sc-eQTL 9.04e-01 -0.0099 0.0819 0.288 Other_T L1
ENSG00000125703 ATG4C 471997 sc-eQTL 5.41e-01 -0.0434 0.0708 0.288 Other_T L1
ENSG00000142856 ITGB3BP -337592 sc-eQTL 7.97e-01 0.0162 0.0628 0.288 Other_T L1
ENSG00000162607 USP1 819832 sc-eQTL 7.86e-01 -0.0148 0.0545 0.288 Other_T L1
ENSG00000203965 EFCAB7 -267243 sc-eQTL 1.19e-01 -0.151 0.0964 0.288 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -337282 sc-eQTL 7.65e-01 -0.0315 0.105 0.296 B_Activated L2
ENSG00000088035 ALG6 -111446 sc-eQTL 7.91e-01 -0.0267 0.101 0.296 B_Activated L2
ENSG00000116641 DOCK7 567743 sc-eQTL 3.51e-01 0.0873 0.0935 0.296 B_Activated L2
ENSG00000125703 ATG4C 471997 sc-eQTL 5.09e-01 -0.0651 0.0985 0.296 B_Activated L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 3.61e-01 0.0879 0.0961 0.296 B_Activated L2
ENSG00000162607 USP1 819832 sc-eQTL 3.37e-02 0.221 0.103 0.296 B_Activated L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 5.08e-01 -0.0603 0.0911 0.296 B_Activated L2
ENSG00000079739 PGM1 -337282 sc-eQTL 2.35e-01 -0.113 0.095 0.29 B_Intermediate L2
ENSG00000088035 ALG6 -111446 sc-eQTL 4.12e-01 -0.0794 0.0966 0.29 B_Intermediate L2
ENSG00000116641 DOCK7 567743 sc-eQTL 8.84e-01 -0.0135 0.0924 0.29 B_Intermediate L2
ENSG00000125703 ATG4C 471997 sc-eQTL 5.16e-01 0.0508 0.0782 0.29 B_Intermediate L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 9.46e-01 -0.00634 0.0932 0.29 B_Intermediate L2
ENSG00000162607 USP1 819832 sc-eQTL 7.01e-01 -0.0358 0.093 0.29 B_Intermediate L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 6.49e-01 -0.0421 0.0923 0.29 B_Intermediate L2
ENSG00000079739 PGM1 -337282 sc-eQTL 5.21e-02 -0.179 0.0919 0.291 B_Memory L2
ENSG00000088035 ALG6 -111446 sc-eQTL 1.27e-03 -0.3 0.0919 0.291 B_Memory L2
ENSG00000116641 DOCK7 567743 sc-eQTL 9.86e-01 0.0015 0.0884 0.291 B_Memory L2
ENSG00000125703 ATG4C 471997 sc-eQTL 4.35e-01 0.0656 0.0839 0.291 B_Memory L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 1.23e-01 -0.148 0.0956 0.291 B_Memory L2
ENSG00000162607 USP1 819832 sc-eQTL 2.53e-01 -0.111 0.0967 0.291 B_Memory L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 7.68e-01 0.0282 0.0954 0.291 B_Memory L2
ENSG00000079739 PGM1 -337282 sc-eQTL 5.77e-01 -0.0523 0.0935 0.288 B_Naive1 L2
ENSG00000088035 ALG6 -111446 sc-eQTL 4.96e-02 -0.184 0.0931 0.288 B_Naive1 L2
ENSG00000116641 DOCK7 567743 sc-eQTL 2.82e-01 0.097 0.0898 0.288 B_Naive1 L2
ENSG00000125703 ATG4C 471997 sc-eQTL 1.72e-01 0.0947 0.0691 0.288 B_Naive1 L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 8.46e-01 0.0179 0.092 0.288 B_Naive1 L2
ENSG00000162607 USP1 819832 sc-eQTL 8.46e-01 -0.0158 0.0809 0.288 B_Naive1 L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 7.21e-01 -0.0351 0.0981 0.288 B_Naive1 L2
ENSG00000079739 PGM1 -337282 sc-eQTL 6.03e-01 -0.0484 0.093 0.29 B_Naive2 L2
ENSG00000088035 ALG6 -111446 sc-eQTL 2.11e-01 0.121 0.0966 0.29 B_Naive2 L2
ENSG00000116641 DOCK7 567743 sc-eQTL 9.36e-01 0.00748 0.0933 0.29 B_Naive2 L2
ENSG00000125703 ATG4C 471997 sc-eQTL 7.33e-01 0.0306 0.0897 0.29 B_Naive2 L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 2.00e-01 -0.125 0.097 0.29 B_Naive2 L2
ENSG00000162607 USP1 819832 sc-eQTL 2.99e-01 -0.0963 0.0924 0.29 B_Naive2 L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 2.79e-01 -0.105 0.0966 0.29 B_Naive2 L2
ENSG00000079739 PGM1 -337282 sc-eQTL 7.79e-02 0.163 0.092 0.293 CD4_CTL L2
ENSG00000088035 ALG6 -111446 sc-eQTL 3.43e-02 -0.207 0.0969 0.293 CD4_CTL L2
ENSG00000116641 DOCK7 567743 sc-eQTL 9.10e-01 0.00972 0.0857 0.293 CD4_CTL L2
ENSG00000125703 ATG4C 471997 sc-eQTL 4.77e-01 0.0631 0.0886 0.293 CD4_CTL L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 7.93e-01 -0.0249 0.0948 0.293 CD4_CTL L2
ENSG00000162607 USP1 819832 sc-eQTL 3.27e-01 0.0885 0.0901 0.293 CD4_CTL L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 3.13e-01 0.091 0.0899 0.293 CD4_CTL L2
ENSG00000079739 PGM1 -337282 sc-eQTL 5.89e-01 -0.041 0.0759 0.288 CD4_Naive L2
ENSG00000088035 ALG6 -111446 sc-eQTL 7.99e-02 0.144 0.0819 0.288 CD4_Naive L2
ENSG00000116641 DOCK7 567743 sc-eQTL 8.96e-01 -0.0106 0.0811 0.288 CD4_Naive L2
ENSG00000125703 ATG4C 471997 sc-eQTL 7.06e-01 0.027 0.0716 0.288 CD4_Naive L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 1.19e-01 -0.136 0.0871 0.288 CD4_Naive L2
ENSG00000162607 USP1 819832 sc-eQTL 7.11e-01 0.0248 0.0669 0.288 CD4_Naive L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 3.33e-01 0.0842 0.0868 0.288 CD4_Naive L2
ENSG00000079739 PGM1 -337282 sc-eQTL 6.11e-02 -0.147 0.0779 0.288 CD4_TCM L2
ENSG00000088035 ALG6 -111446 sc-eQTL 8.97e-01 -0.0119 0.0913 0.288 CD4_TCM L2
ENSG00000116641 DOCK7 567743 sc-eQTL 6.43e-01 0.0375 0.0808 0.288 CD4_TCM L2
ENSG00000125703 ATG4C 471997 sc-eQTL 2.13e-01 0.0979 0.0785 0.288 CD4_TCM L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 5.90e-01 -0.0501 0.0928 0.288 CD4_TCM L2
ENSG00000162607 USP1 819832 sc-eQTL 1.86e-01 -0.101 0.0758 0.288 CD4_TCM L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 8.07e-01 0.0219 0.0898 0.288 CD4_TCM L2
ENSG00000079739 PGM1 -337282 sc-eQTL 6.16e-01 0.0477 0.095 0.288 CD4_TEM L2
ENSG00000088035 ALG6 -111446 sc-eQTL 7.37e-01 -0.0321 0.0955 0.288 CD4_TEM L2
ENSG00000116641 DOCK7 567743 sc-eQTL 4.56e-01 0.0694 0.093 0.288 CD4_TEM L2
ENSG00000125703 ATG4C 471997 sc-eQTL 2.89e-01 -0.0958 0.0902 0.288 CD4_TEM L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 4.84e-01 -0.0654 0.0932 0.288 CD4_TEM L2
ENSG00000162607 USP1 819832 sc-eQTL 1.90e-01 0.116 0.0881 0.288 CD4_TEM L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 7.24e-01 0.0342 0.0967 0.288 CD4_TEM L2
ENSG00000079739 PGM1 -337282 sc-eQTL 8.69e-01 0.0142 0.086 0.288 CD8_CTL L2
ENSG00000088035 ALG6 -111446 sc-eQTL 5.99e-01 -0.0482 0.0914 0.288 CD8_CTL L2
ENSG00000116641 DOCK7 567743 sc-eQTL 5.82e-01 0.0479 0.0867 0.288 CD8_CTL L2
ENSG00000125703 ATG4C 471997 sc-eQTL 5.42e-01 -0.0563 0.0923 0.288 CD8_CTL L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 5.82e-01 -0.0529 0.096 0.288 CD8_CTL L2
ENSG00000162607 USP1 819832 sc-eQTL 1.56e-01 -0.122 0.0856 0.288 CD8_CTL L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 9.10e-01 0.0112 0.0984 0.288 CD8_CTL L2
ENSG00000079739 PGM1 -337282 sc-eQTL 9.97e-01 -0.000361 0.0862 0.288 CD8_Naive L2
ENSG00000088035 ALG6 -111446 sc-eQTL 1.20e-01 0.138 0.0887 0.288 CD8_Naive L2
ENSG00000116641 DOCK7 567743 sc-eQTL 7.01e-01 0.0354 0.0922 0.288 CD8_Naive L2
ENSG00000125703 ATG4C 471997 sc-eQTL 3.00e-01 0.0918 0.0883 0.288 CD8_Naive L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 9.34e-01 0.00745 0.0897 0.288 CD8_Naive L2
ENSG00000162607 USP1 819832 sc-eQTL 9.54e-01 0.00439 0.0758 0.288 CD8_Naive L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 6.31e-01 0.0407 0.0845 0.288 CD8_Naive L2
ENSG00000079739 PGM1 -337282 sc-eQTL 5.23e-01 0.0611 0.0955 0.287 CD8_TCM L2
ENSG00000088035 ALG6 -111446 sc-eQTL 4.84e-02 0.19 0.0958 0.287 CD8_TCM L2
ENSG00000116641 DOCK7 567743 sc-eQTL 2.06e-01 0.119 0.0941 0.287 CD8_TCM L2
ENSG00000125703 ATG4C 471997 sc-eQTL 3.57e-01 0.089 0.0964 0.287 CD8_TCM L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 8.66e-01 -0.0159 0.0939 0.287 CD8_TCM L2
ENSG00000162607 USP1 819832 sc-eQTL 3.61e-01 -0.0825 0.0902 0.287 CD8_TCM L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 9.84e-01 -0.00197 0.0957 0.287 CD8_TCM L2
ENSG00000079739 PGM1 -337282 sc-eQTL 9.72e-03 -0.244 0.0933 0.292 CD8_TEM L2
ENSG00000088035 ALG6 -111446 sc-eQTL 3.74e-01 -0.0847 0.0951 0.292 CD8_TEM L2
ENSG00000116641 DOCK7 567743 sc-eQTL 8.48e-01 -0.0177 0.0923 0.292 CD8_TEM L2
ENSG00000125703 ATG4C 471997 sc-eQTL 8.28e-01 0.0193 0.0888 0.292 CD8_TEM L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 6.22e-01 -0.0475 0.096 0.292 CD8_TEM L2
ENSG00000162607 USP1 819832 sc-eQTL 8.11e-01 -0.0219 0.0917 0.292 CD8_TEM L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 9.72e-02 -0.154 0.0925 0.292 CD8_TEM L2
ENSG00000079739 PGM1 -337282 sc-eQTL 1.39e-01 -0.134 0.0905 0.29 MAIT L2
ENSG00000088035 ALG6 -111446 sc-eQTL 1.63e-01 -0.125 0.0897 0.29 MAIT L2
ENSG00000116641 DOCK7 567743 sc-eQTL 9.54e-01 -0.00499 0.0863 0.29 MAIT L2
ENSG00000125703 ATG4C 471997 sc-eQTL 5.97e-01 0.0482 0.091 0.29 MAIT L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 4.01e-01 -0.0765 0.091 0.29 MAIT L2
ENSG00000162607 USP1 819832 sc-eQTL 3.20e-01 -0.09 0.0903 0.29 MAIT L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 1.25e-01 -0.144 0.0934 0.29 MAIT L2
ENSG00000079739 PGM1 -337282 sc-eQTL 8.73e-01 0.0144 0.0904 0.293 NK_CD56bright L2
ENSG00000088035 ALG6 -111446 sc-eQTL 9.02e-01 -0.0115 0.0927 0.293 NK_CD56bright L2
ENSG00000116641 DOCK7 567743 sc-eQTL 9.17e-01 0.00834 0.0803 0.293 NK_CD56bright L2
ENSG00000125703 ATG4C 471997 sc-eQTL 4.10e-01 -0.0739 0.0896 0.293 NK_CD56bright L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 4.32e-01 0.0735 0.0933 0.293 NK_CD56bright L2
ENSG00000162607 USP1 819832 sc-eQTL 1.33e-02 0.237 0.0949 0.293 NK_CD56bright L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 2.80e-01 -0.0996 0.0919 0.293 NK_CD56bright L2
ENSG00000079739 PGM1 -337282 sc-eQTL 5.85e-01 0.0399 0.0728 0.289 NK_CD56dim L2
ENSG00000088035 ALG6 -111446 sc-eQTL 1.46e-01 -0.134 0.092 0.289 NK_CD56dim L2
ENSG00000116641 DOCK7 567743 sc-eQTL 4.10e-01 -0.0663 0.0803 0.289 NK_CD56dim L2
ENSG00000125703 ATG4C 471997 sc-eQTL 9.40e-01 -0.00618 0.0817 0.289 NK_CD56dim L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 7.83e-01 0.0256 0.0929 0.289 NK_CD56dim L2
ENSG00000162607 USP1 819832 sc-eQTL 7.12e-01 -0.0333 0.0901 0.289 NK_CD56dim L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 6.92e-01 0.0399 0.1 0.289 NK_CD56dim L2
ENSG00000079739 PGM1 -337282 sc-eQTL 5.81e-01 -0.0541 0.098 0.295 NK_HLA L2
ENSG00000088035 ALG6 -111446 sc-eQTL 2.17e-01 0.126 0.101 0.295 NK_HLA L2
ENSG00000116641 DOCK7 567743 sc-eQTL 7.23e-01 -0.0276 0.0777 0.295 NK_HLA L2
ENSG00000125703 ATG4C 471997 sc-eQTL 3.72e-01 0.0808 0.0902 0.295 NK_HLA L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 2.06e-01 0.12 0.0945 0.295 NK_HLA L2
ENSG00000162607 USP1 819832 sc-eQTL 5.92e-01 0.0533 0.0993 0.295 NK_HLA L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 7.82e-01 -0.025 0.0904 0.295 NK_HLA L2
ENSG00000079739 PGM1 -337282 sc-eQTL 7.83e-01 -0.0218 0.0792 0.289 NK_cytokine L2
ENSG00000088035 ALG6 -111446 sc-eQTL 7.66e-01 0.0267 0.0895 0.289 NK_cytokine L2
ENSG00000116641 DOCK7 567743 sc-eQTL 5.63e-02 0.158 0.0822 0.289 NK_cytokine L2
ENSG00000125703 ATG4C 471997 sc-eQTL 7.24e-01 -0.0299 0.0848 0.289 NK_cytokine L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 6.71e-01 -0.0374 0.0878 0.289 NK_cytokine L2
ENSG00000162607 USP1 819832 sc-eQTL 8.91e-01 -0.0127 0.0923 0.289 NK_cytokine L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 2.22e-01 -0.114 0.0933 0.289 NK_cytokine L2
ENSG00000079739 PGM1 -337282 sc-eQTL 3.73e-01 -0.105 0.117 0.27 PB L2
ENSG00000088035 ALG6 -111446 sc-eQTL 1.78e-01 -0.166 0.123 0.27 PB L2
ENSG00000116641 DOCK7 567743 sc-eQTL 1.93e-01 -0.172 0.131 0.27 PB L2
ENSG00000125703 ATG4C 471997 sc-eQTL 5.78e-01 0.0642 0.115 0.27 PB L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 1.42e-01 0.168 0.114 0.27 PB L2
ENSG00000162607 USP1 819832 sc-eQTL 5.40e-01 0.0703 0.114 0.27 PB L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 7.41e-01 -0.0418 0.126 0.27 PB L2
ENSG00000079739 PGM1 -337282 sc-eQTL 8.53e-01 0.0159 0.0857 0.285 Pro_T L2
ENSG00000088035 ALG6 -111446 sc-eQTL 3.04e-01 -0.0895 0.087 0.285 Pro_T L2
ENSG00000116641 DOCK7 567743 sc-eQTL 2.48e-01 -0.101 0.0872 0.285 Pro_T L2
ENSG00000125703 ATG4C 471997 sc-eQTL 6.07e-01 0.0395 0.0765 0.285 Pro_T L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 1.84e-01 0.102 0.0765 0.285 Pro_T L2
ENSG00000162607 USP1 819832 sc-eQTL 1.22e-01 0.0816 0.0525 0.285 Pro_T L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 3.14e-01 0.0898 0.089 0.285 Pro_T L2
ENSG00000079739 PGM1 -337282 sc-eQTL 6.37e-01 0.0429 0.0908 0.288 Treg L2
ENSG00000088035 ALG6 -111446 sc-eQTL 1.64e-01 0.135 0.0967 0.288 Treg L2
ENSG00000116641 DOCK7 567743 sc-eQTL 5.96e-01 0.0474 0.0892 0.288 Treg L2
ENSG00000125703 ATG4C 471997 sc-eQTL 7.59e-01 0.028 0.0912 0.288 Treg L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 6.78e-02 -0.174 0.0946 0.288 Treg L2
ENSG00000162607 USP1 819832 sc-eQTL 4.19e-01 0.0746 0.0921 0.288 Treg L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 1.49e-01 0.132 0.0908 0.288 Treg L2
ENSG00000079739 PGM1 -337282 sc-eQTL 4.15e-01 0.0729 0.0892 0.298 cDC L2
ENSG00000088035 ALG6 -111446 sc-eQTL 8.33e-01 0.0191 0.0906 0.298 cDC L2
ENSG00000116641 DOCK7 567743 sc-eQTL 2.66e-01 0.0989 0.0886 0.298 cDC L2
ENSG00000125703 ATG4C 471997 sc-eQTL 1.39e-02 0.189 0.076 0.298 cDC L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 3.66e-01 -0.0885 0.0977 0.298 cDC L2
ENSG00000162607 USP1 819832 sc-eQTL 5.58e-01 -0.0511 0.0871 0.298 cDC L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 8.16e-01 0.0184 0.0786 0.298 cDC L2
ENSG00000079739 PGM1 -337282 sc-eQTL 1.82e-01 -0.114 0.0854 0.288 cMono_IL1B L2
ENSG00000088035 ALG6 -111446 sc-eQTL 8.11e-01 -0.0205 0.0858 0.288 cMono_IL1B L2
ENSG00000116641 DOCK7 567743 sc-eQTL 1.07e-01 0.146 0.09 0.288 cMono_IL1B L2
ENSG00000125703 ATG4C 471997 sc-eQTL 6.77e-01 0.0266 0.0636 0.288 cMono_IL1B L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 9.70e-01 0.0034 0.0902 0.288 cMono_IL1B L2
ENSG00000162607 USP1 819832 sc-eQTL 9.95e-02 -0.131 0.079 0.288 cMono_IL1B L2
ENSG00000079739 PGM1 -337282 sc-eQTL 6.59e-01 0.0419 0.0949 0.288 cMono_S100A L2
ENSG00000088035 ALG6 -111446 sc-eQTL 7.21e-02 0.173 0.0955 0.288 cMono_S100A L2
ENSG00000116641 DOCK7 567743 sc-eQTL 9.96e-01 0.000415 0.0892 0.288 cMono_S100A L2
ENSG00000125703 ATG4C 471997 sc-eQTL 7.07e-01 0.029 0.0772 0.288 cMono_S100A L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 8.62e-01 0.0152 0.0871 0.288 cMono_S100A L2
ENSG00000162607 USP1 819832 sc-eQTL 2.44e-01 0.104 0.0894 0.288 cMono_S100A L2
ENSG00000079739 PGM1 -337282 sc-eQTL 2.16e-01 -0.125 0.1 0.318 gdT L2
ENSG00000088035 ALG6 -111446 sc-eQTL 4.66e-01 -0.0783 0.107 0.318 gdT L2
ENSG00000116641 DOCK7 567743 sc-eQTL 9.82e-01 0.00236 0.105 0.318 gdT L2
ENSG00000125703 ATG4C 471997 sc-eQTL 7.04e-03 -0.268 0.0982 0.318 gdT L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 6.97e-01 0.0417 0.107 0.318 gdT L2
ENSG00000162607 USP1 819832 sc-eQTL 8.33e-01 -0.0214 0.101 0.318 gdT L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 1.04e-01 -0.171 0.104 0.318 gdT L2
ENSG00000079739 PGM1 -337282 sc-eQTL 2.03e-01 -0.122 0.0958 0.289 intMono L2
ENSG00000088035 ALG6 -111446 sc-eQTL 8.53e-01 -0.0166 0.0895 0.289 intMono L2
ENSG00000116641 DOCK7 567743 sc-eQTL 9.63e-01 0.00424 0.0915 0.289 intMono L2
ENSG00000125703 ATG4C 471997 sc-eQTL 1.93e-01 -0.114 0.0869 0.289 intMono L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 9.43e-01 -0.0069 0.0962 0.289 intMono L2
ENSG00000162607 USP1 819832 sc-eQTL 7.62e-01 -0.0297 0.0978 0.289 intMono L2
ENSG00000079739 PGM1 -337282 sc-eQTL 2.47e-01 0.0997 0.0858 0.29 ncMono L2
ENSG00000088035 ALG6 -111446 sc-eQTL 1.52e-01 -0.135 0.0941 0.29 ncMono L2
ENSG00000116641 DOCK7 567743 sc-eQTL 2.15e-01 0.115 0.0927 0.29 ncMono L2
ENSG00000125703 ATG4C 471997 sc-eQTL 7.58e-01 0.0268 0.0869 0.29 ncMono L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 3.21e-01 -0.0904 0.0907 0.29 ncMono L2
ENSG00000162607 USP1 819832 sc-eQTL 5.37e-01 -0.0574 0.0929 0.29 ncMono L2
ENSG00000079739 PGM1 -337282 sc-eQTL 9.57e-01 -0.00541 0.101 0.302 pDC L2
ENSG00000088035 ALG6 -111446 sc-eQTL 9.74e-01 0.00316 0.0984 0.302 pDC L2
ENSG00000116641 DOCK7 567743 sc-eQTL 3.80e-01 0.0883 0.1 0.302 pDC L2
ENSG00000125703 ATG4C 471997 sc-eQTL 7.95e-01 -0.0234 0.0901 0.302 pDC L2
ENSG00000142856 ITGB3BP -337592 sc-eQTL 7.16e-01 -0.0368 0.101 0.302 pDC L2
ENSG00000162607 USP1 819832 sc-eQTL 7.68e-01 0.0305 0.103 0.302 pDC L2
ENSG00000203965 EFCAB7 -267243 sc-eQTL 4.01e-02 0.183 0.0883 0.302 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -337282 sc-eQTL 1.80e-01 -0.118 0.0874 0.288 B_Memory LOneK1K
ENSG00000088035 ALG6 -111446 sc-eQTL 8.92e-03 -0.252 0.0955 0.288 B_Memory LOneK1K
ENSG00000116641 DOCK7 567743 sc-eQTL 8.56e-01 -0.0154 0.0842 0.288 B_Memory LOneK1K
ENSG00000125703 ATG4C 471997 sc-eQTL 9.03e-01 0.00835 0.0681 0.288 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -337592 sc-eQTL 4.18e-01 -0.0726 0.0893 0.288 B_Memory LOneK1K
ENSG00000162607 USP1 819832 sc-eQTL 8.94e-01 -0.0116 0.0869 0.288 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -267243 sc-eQTL 9.91e-01 0.001 0.0933 0.288 B_Memory LOneK1K
ENSG00000079739 PGM1 -337282 sc-eQTL 3.07e-01 -0.0937 0.0916 0.288 B_Naive LOneK1K
ENSG00000088035 ALG6 -111446 sc-eQTL 3.82e-01 -0.0827 0.0943 0.288 B_Naive LOneK1K
ENSG00000116641 DOCK7 567743 sc-eQTL 2.44e-01 0.103 0.088 0.288 B_Naive LOneK1K
ENSG00000125703 ATG4C 471997 sc-eQTL 3.56e-01 0.0622 0.0672 0.288 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -337592 sc-eQTL 6.11e-01 -0.0485 0.0952 0.288 B_Naive LOneK1K
ENSG00000162607 USP1 819832 sc-eQTL 4.00e-01 -0.0689 0.0817 0.288 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -267243 sc-eQTL 5.65e-01 -0.0551 0.0956 0.288 B_Naive LOneK1K
ENSG00000079739 PGM1 -337282 sc-eQTL 8.38e-01 -0.0179 0.0871 0.288 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -111446 sc-eQTL 6.16e-01 0.0424 0.0843 0.288 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 567743 sc-eQTL 2.60e-01 0.0957 0.0847 0.288 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 471997 sc-eQTL 6.74e-01 0.0248 0.0587 0.288 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -337592 sc-eQTL 9.87e-01 0.00143 0.0869 0.288 CD14_Mono LOneK1K
ENSG00000162607 USP1 819832 sc-eQTL 6.15e-01 -0.0373 0.0742 0.288 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -337282 sc-eQTL 3.59e-01 -0.077 0.0838 0.284 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -111446 sc-eQTL 2.20e-01 -0.117 0.095 0.284 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 567743 sc-eQTL 7.11e-01 0.035 0.0943 0.284 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 471997 sc-eQTL 9.40e-01 -0.00609 0.0804 0.284 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -337592 sc-eQTL 8.06e-01 -0.023 0.0934 0.284 CD16_Mono LOneK1K
ENSG00000162607 USP1 819832 sc-eQTL 2.70e-01 -0.0968 0.0875 0.284 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -337282 sc-eQTL 6.60e-01 0.0313 0.071 0.289 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -111446 sc-eQTL 7.04e-01 -0.0324 0.0852 0.289 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 567743 sc-eQTL 4.11e-01 0.0627 0.0762 0.289 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 471997 sc-eQTL 7.39e-01 -0.0254 0.0762 0.289 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -337592 sc-eQTL 9.33e-01 0.00762 0.0903 0.289 NK_CD56dim LOneK1K
ENSG00000162607 USP1 819832 sc-eQTL 4.73e-01 -0.0589 0.0819 0.289 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -267243 sc-eQTL 7.15e-01 -0.0365 0.0998 0.289 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -337282 eQTL 0.00704 -0.0491 0.0182 0.0 0.0 0.359

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -337282 1.29e-06 9.37e-07 3.03e-07 5.51e-07 2.66e-07 4.63e-07 1.13e-06 3.43e-07 1.15e-06 3.99e-07 1.4e-06 5.64e-07 1.68e-06 2.55e-07 4.48e-07 7.17e-07 8.11e-07 5.63e-07 5.34e-07 6.39e-07 4.19e-07 1.2e-06 7.78e-07 6.02e-07 1.94e-06 3.66e-07 6.85e-07 7.22e-07 1.01e-06 1.08e-06 5.2e-07 9.54e-08 2.29e-07 5.28e-07 4.34e-07 4.09e-07 4.26e-07 1.25e-07 2.78e-07 9.07e-08 3.02e-07 1.43e-06 5.45e-08 3.4e-08 1.84e-07 1.01e-07 2.37e-07 8.67e-08 8.28e-08
ENSG00000142856 \N -337592 1.28e-06 9.37e-07 3.03e-07 5.51e-07 2.66e-07 4.63e-07 1.13e-06 3.43e-07 1.15e-06 3.99e-07 1.4e-06 5.98e-07 1.68e-06 2.55e-07 4.35e-07 7.17e-07 7.74e-07 5.63e-07 5.29e-07 6.39e-07 4.19e-07 1.2e-06 7.78e-07 6.1e-07 1.94e-06 3.66e-07 6.85e-07 7.22e-07 1.01e-06 1.08e-06 5.2e-07 9.54e-08 2.27e-07 5.28e-07 4.34e-07 4.09e-07 4.26e-07 1.25e-07 2.78e-07 9.07e-08 2.89e-07 1.43e-06 5.45e-08 3.4e-08 1.84e-07 1.01e-07 2.37e-07 7.81e-08 8.28e-08