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Genes within 1Mb (chr1:63251580:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -341831 sc-eQTL 2.20e-01 0.0896 0.0728 0.457 B L1
ENSG00000088035 ALG6 -115995 sc-eQTL 2.27e-01 0.0913 0.0754 0.457 B L1
ENSG00000116641 DOCK7 563194 sc-eQTL 5.48e-01 -0.0455 0.0756 0.457 B L1
ENSG00000125703 ATG4C 467448 sc-eQTL 5.26e-01 -0.0334 0.0525 0.457 B L1
ENSG00000142856 ITGB3BP -342141 sc-eQTL 5.49e-01 -0.0502 0.0836 0.457 B L1
ENSG00000162607 USP1 815283 sc-eQTL 5.06e-01 -0.0484 0.0726 0.457 B L1
ENSG00000203965 EFCAB7 -271792 sc-eQTL 3.51e-01 -0.0799 0.0856 0.457 B L1
ENSG00000079739 PGM1 -341831 sc-eQTL 1.54e-01 0.0893 0.0625 0.457 CD4T L1
ENSG00000088035 ALG6 -115995 sc-eQTL 7.58e-01 -0.0214 0.0692 0.457 CD4T L1
ENSG00000116641 DOCK7 563194 sc-eQTL 2.68e-01 -0.0776 0.0699 0.457 CD4T L1
ENSG00000125703 ATG4C 467448 sc-eQTL 6.22e-01 -0.028 0.0566 0.457 CD4T L1
ENSG00000142856 ITGB3BP -342141 sc-eQTL 9.29e-01 -0.00715 0.0804 0.457 CD4T L1
ENSG00000162607 USP1 815283 sc-eQTL 4.40e-01 -0.0425 0.0549 0.457 CD4T L1
ENSG00000203965 EFCAB7 -271792 sc-eQTL 6.60e-01 -0.0318 0.0721 0.457 CD4T L1
ENSG00000079739 PGM1 -341831 sc-eQTL 8.87e-01 -0.0098 0.0686 0.457 CD8T L1
ENSG00000088035 ALG6 -115995 sc-eQTL 6.39e-01 0.0355 0.0756 0.457 CD8T L1
ENSG00000116641 DOCK7 563194 sc-eQTL 2.20e-01 -0.094 0.0764 0.457 CD8T L1
ENSG00000125703 ATG4C 467448 sc-eQTL 5.89e-01 0.0394 0.0728 0.457 CD8T L1
ENSG00000142856 ITGB3BP -342141 sc-eQTL 2.61e-01 -0.0914 0.0812 0.457 CD8T L1
ENSG00000162607 USP1 815283 sc-eQTL 9.97e-01 -0.000259 0.0634 0.457 CD8T L1
ENSG00000203965 EFCAB7 -271792 sc-eQTL 6.55e-01 0.0363 0.0811 0.457 CD8T L1
ENSG00000079739 PGM1 -341831 sc-eQTL 2.22e-01 -0.0937 0.0765 0.457 DC L1
ENSG00000088035 ALG6 -115995 sc-eQTL 5.54e-01 0.0469 0.0792 0.457 DC L1
ENSG00000116641 DOCK7 563194 sc-eQTL 2.61e-02 -0.18 0.0802 0.457 DC L1
ENSG00000125703 ATG4C 467448 sc-eQTL 9.51e-02 -0.106 0.0631 0.457 DC L1
ENSG00000142856 ITGB3BP -342141 sc-eQTL 6.13e-01 -0.045 0.0888 0.457 DC L1
ENSG00000162607 USP1 815283 sc-eQTL 9.46e-01 -0.00521 0.0776 0.457 DC L1
ENSG00000203965 EFCAB7 -271792 sc-eQTL 7.96e-01 -0.02 0.0773 0.457 DC L1
ENSG00000079739 PGM1 -341831 sc-eQTL 7.83e-01 -0.021 0.0761 0.457 Mono L1
ENSG00000088035 ALG6 -115995 sc-eQTL 7.83e-01 0.0219 0.0794 0.457 Mono L1
ENSG00000116641 DOCK7 563194 sc-eQTL 4.12e-01 -0.0631 0.0767 0.457 Mono L1
ENSG00000125703 ATG4C 467448 sc-eQTL 3.71e-01 -0.0465 0.0518 0.457 Mono L1
ENSG00000142856 ITGB3BP -342141 sc-eQTL 8.09e-02 -0.143 0.0814 0.457 Mono L1
ENSG00000162607 USP1 815283 sc-eQTL 8.35e-01 -0.014 0.0673 0.457 Mono L1
ENSG00000079739 PGM1 -341831 sc-eQTL 8.86e-02 -0.109 0.0635 0.457 NK L1
ENSG00000088035 ALG6 -115995 sc-eQTL 8.20e-01 0.0171 0.0749 0.457 NK L1
ENSG00000116641 DOCK7 563194 sc-eQTL 9.92e-01 -0.000646 0.0617 0.457 NK L1
ENSG00000125703 ATG4C 467448 sc-eQTL 8.22e-01 0.015 0.0663 0.457 NK L1
ENSG00000142856 ITGB3BP -342141 sc-eQTL 2.99e-01 -0.0856 0.0822 0.457 NK L1
ENSG00000162607 USP1 815283 sc-eQTL 5.19e-01 -0.0475 0.0735 0.457 NK L1
ENSG00000203965 EFCAB7 -271792 sc-eQTL 9.92e-01 -0.000894 0.0894 0.457 NK L1
ENSG00000079739 PGM1 -341831 sc-eQTL 2.23e-01 0.0907 0.0742 0.457 Other_T L1
ENSG00000088035 ALG6 -115995 sc-eQTL 1.45e-01 0.109 0.0744 0.457 Other_T L1
ENSG00000116641 DOCK7 563194 sc-eQTL 5.01e-01 0.0514 0.0763 0.457 Other_T L1
ENSG00000125703 ATG4C 467448 sc-eQTL 9.33e-01 0.00557 0.0661 0.457 Other_T L1
ENSG00000142856 ITGB3BP -342141 sc-eQTL 9.79e-01 0.00152 0.0586 0.457 Other_T L1
ENSG00000162607 USP1 815283 sc-eQTL 6.65e-01 0.022 0.0508 0.457 Other_T L1
ENSG00000203965 EFCAB7 -271792 sc-eQTL 2.27e-01 0.109 0.0902 0.457 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -341831 sc-eQTL 9.04e-01 0.0115 0.0948 0.459 B_Activated L2
ENSG00000088035 ALG6 -115995 sc-eQTL 8.11e-01 -0.0218 0.0908 0.459 B_Activated L2
ENSG00000116641 DOCK7 563194 sc-eQTL 8.11e-01 0.0202 0.0846 0.459 B_Activated L2
ENSG00000125703 ATG4C 467448 sc-eQTL 8.99e-01 0.0113 0.089 0.459 B_Activated L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 7.96e-02 -0.152 0.0861 0.459 B_Activated L2
ENSG00000162607 USP1 815283 sc-eQTL 2.15e-01 -0.117 0.0938 0.459 B_Activated L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 4.01e-01 -0.0692 0.0821 0.459 B_Activated L2
ENSG00000079739 PGM1 -341831 sc-eQTL 3.15e-01 0.0886 0.088 0.455 B_Intermediate L2
ENSG00000088035 ALG6 -115995 sc-eQTL 8.26e-01 -0.0198 0.0896 0.455 B_Intermediate L2
ENSG00000116641 DOCK7 563194 sc-eQTL 5.45e-01 0.0519 0.0855 0.455 B_Intermediate L2
ENSG00000125703 ATG4C 467448 sc-eQTL 1.43e-01 -0.106 0.0721 0.455 B_Intermediate L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 4.86e-01 -0.0602 0.0862 0.455 B_Intermediate L2
ENSG00000162607 USP1 815283 sc-eQTL 4.14e-01 -0.0705 0.0861 0.455 B_Intermediate L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 5.50e-01 0.0511 0.0854 0.455 B_Intermediate L2
ENSG00000079739 PGM1 -341831 sc-eQTL 2.32e-01 0.102 0.085 0.453 B_Memory L2
ENSG00000088035 ALG6 -115995 sc-eQTL 6.02e-03 0.236 0.0851 0.453 B_Memory L2
ENSG00000116641 DOCK7 563194 sc-eQTL 9.67e-01 -0.00337 0.0813 0.453 B_Memory L2
ENSG00000125703 ATG4C 467448 sc-eQTL 3.46e-01 -0.0728 0.0771 0.453 B_Memory L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 2.42e-01 -0.103 0.0881 0.453 B_Memory L2
ENSG00000162607 USP1 815283 sc-eQTL 1.78e-01 0.12 0.0888 0.453 B_Memory L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 2.43e-01 -0.102 0.0875 0.453 B_Memory L2
ENSG00000079739 PGM1 -341831 sc-eQTL 4.77e-01 0.0622 0.0872 0.457 B_Naive1 L2
ENSG00000088035 ALG6 -115995 sc-eQTL 4.59e-01 0.0649 0.0875 0.457 B_Naive1 L2
ENSG00000116641 DOCK7 563194 sc-eQTL 2.27e-01 -0.101 0.0836 0.457 B_Naive1 L2
ENSG00000125703 ATG4C 467448 sc-eQTL 7.76e-02 -0.114 0.0642 0.457 B_Naive1 L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 4.42e-01 -0.0659 0.0857 0.457 B_Naive1 L2
ENSG00000162607 USP1 815283 sc-eQTL 9.05e-01 -0.00902 0.0754 0.457 B_Naive1 L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 7.11e-01 -0.0339 0.0915 0.457 B_Naive1 L2
ENSG00000079739 PGM1 -341831 sc-eQTL 6.47e-01 0.0395 0.0862 0.455 B_Naive2 L2
ENSG00000088035 ALG6 -115995 sc-eQTL 8.77e-01 -0.0139 0.0899 0.455 B_Naive2 L2
ENSG00000116641 DOCK7 563194 sc-eQTL 8.58e-01 -0.0155 0.0864 0.455 B_Naive2 L2
ENSG00000125703 ATG4C 467448 sc-eQTL 6.25e-01 -0.0407 0.0831 0.455 B_Naive2 L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 7.81e-01 0.0251 0.0902 0.455 B_Naive2 L2
ENSG00000162607 USP1 815283 sc-eQTL 7.73e-01 -0.0248 0.0859 0.455 B_Naive2 L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 5.34e-01 0.0558 0.0897 0.455 B_Naive2 L2
ENSG00000079739 PGM1 -341831 sc-eQTL 2.81e-01 -0.0932 0.0862 0.457 CD4_CTL L2
ENSG00000088035 ALG6 -115995 sc-eQTL 9.40e-01 0.0069 0.0914 0.457 CD4_CTL L2
ENSG00000116641 DOCK7 563194 sc-eQTL 4.69e-01 0.0579 0.0798 0.457 CD4_CTL L2
ENSG00000125703 ATG4C 467448 sc-eQTL 1.64e-01 -0.115 0.0822 0.457 CD4_CTL L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 5.70e-01 0.0503 0.0883 0.457 CD4_CTL L2
ENSG00000162607 USP1 815283 sc-eQTL 8.50e-02 -0.145 0.0835 0.457 CD4_CTL L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 8.99e-01 -0.0107 0.084 0.457 CD4_CTL L2
ENSG00000079739 PGM1 -341831 sc-eQTL 6.98e-02 0.128 0.0703 0.457 CD4_Naive L2
ENSG00000088035 ALG6 -115995 sc-eQTL 3.32e-01 -0.0747 0.0768 0.457 CD4_Naive L2
ENSG00000116641 DOCK7 563194 sc-eQTL 2.85e-01 -0.081 0.0755 0.457 CD4_Naive L2
ENSG00000125703 ATG4C 467448 sc-eQTL 4.32e-01 -0.0525 0.0668 0.457 CD4_Naive L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 8.59e-01 -0.0146 0.0817 0.457 CD4_Naive L2
ENSG00000162607 USP1 815283 sc-eQTL 2.95e-01 -0.0654 0.0623 0.457 CD4_Naive L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 1.71e-01 -0.111 0.0808 0.457 CD4_Naive L2
ENSG00000079739 PGM1 -341831 sc-eQTL 2.26e-01 0.0884 0.0728 0.457 CD4_TCM L2
ENSG00000088035 ALG6 -115995 sc-eQTL 8.68e-01 -0.0141 0.0848 0.457 CD4_TCM L2
ENSG00000116641 DOCK7 563194 sc-eQTL 6.52e-01 -0.0339 0.0751 0.457 CD4_TCM L2
ENSG00000125703 ATG4C 467448 sc-eQTL 9.81e-01 -0.0017 0.0732 0.457 CD4_TCM L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 7.61e-01 -0.0263 0.0862 0.457 CD4_TCM L2
ENSG00000162607 USP1 815283 sc-eQTL 5.86e-01 0.0386 0.0707 0.457 CD4_TCM L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 7.58e-01 -0.0257 0.0834 0.457 CD4_TCM L2
ENSG00000079739 PGM1 -341831 sc-eQTL 1.85e-01 -0.115 0.0864 0.457 CD4_TEM L2
ENSG00000088035 ALG6 -115995 sc-eQTL 3.16e-01 0.0876 0.087 0.457 CD4_TEM L2
ENSG00000116641 DOCK7 563194 sc-eQTL 2.75e-01 -0.0928 0.0848 0.457 CD4_TEM L2
ENSG00000125703 ATG4C 467448 sc-eQTL 2.60e-01 0.0931 0.0823 0.457 CD4_TEM L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 6.52e-01 0.0385 0.0852 0.457 CD4_TEM L2
ENSG00000162607 USP1 815283 sc-eQTL 4.95e-01 -0.0551 0.0807 0.457 CD4_TEM L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 3.72e-01 0.0788 0.0882 0.457 CD4_TEM L2
ENSG00000079739 PGM1 -341831 sc-eQTL 2.34e-01 -0.0934 0.0782 0.457 CD8_CTL L2
ENSG00000088035 ALG6 -115995 sc-eQTL 6.73e-01 0.0352 0.0834 0.457 CD8_CTL L2
ENSG00000116641 DOCK7 563194 sc-eQTL 5.25e-01 -0.0504 0.0791 0.457 CD8_CTL L2
ENSG00000125703 ATG4C 467448 sc-eQTL 6.44e-01 0.039 0.0842 0.457 CD8_CTL L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 6.03e-01 0.0455 0.0875 0.457 CD8_CTL L2
ENSG00000162607 USP1 815283 sc-eQTL 2.72e-01 0.0861 0.0782 0.457 CD8_CTL L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 3.31e-01 0.0873 0.0895 0.457 CD8_CTL L2
ENSG00000079739 PGM1 -341831 sc-eQTL 9.68e-01 0.00325 0.0801 0.457 CD8_Naive L2
ENSG00000088035 ALG6 -115995 sc-eQTL 8.36e-01 0.0172 0.0829 0.457 CD8_Naive L2
ENSG00000116641 DOCK7 563194 sc-eQTL 1.82e-01 -0.114 0.0854 0.457 CD8_Naive L2
ENSG00000125703 ATG4C 467448 sc-eQTL 5.33e-01 -0.0513 0.0822 0.457 CD8_Naive L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 1.74e-01 -0.113 0.083 0.457 CD8_Naive L2
ENSG00000162607 USP1 815283 sc-eQTL 2.07e-01 -0.0888 0.0702 0.457 CD8_Naive L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 1.17e-01 -0.123 0.0781 0.457 CD8_Naive L2
ENSG00000079739 PGM1 -341831 sc-eQTL 3.62e-01 -0.0822 0.09 0.451 CD8_TCM L2
ENSG00000088035 ALG6 -115995 sc-eQTL 4.74e-02 -0.18 0.0904 0.451 CD8_TCM L2
ENSG00000116641 DOCK7 563194 sc-eQTL 7.55e-01 0.0278 0.0891 0.451 CD8_TCM L2
ENSG00000125703 ATG4C 467448 sc-eQTL 2.10e-01 0.114 0.0908 0.451 CD8_TCM L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 1.68e-01 -0.122 0.0881 0.451 CD8_TCM L2
ENSG00000162607 USP1 815283 sc-eQTL 6.41e-01 -0.0397 0.0852 0.451 CD8_TCM L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 5.55e-01 0.0533 0.0902 0.451 CD8_TCM L2
ENSG00000079739 PGM1 -341831 sc-eQTL 9.13e-01 0.00969 0.0885 0.457 CD8_TEM L2
ENSG00000088035 ALG6 -115995 sc-eQTL 6.07e-01 0.0457 0.0887 0.457 CD8_TEM L2
ENSG00000116641 DOCK7 563194 sc-eQTL 8.22e-01 0.0194 0.0861 0.457 CD8_TEM L2
ENSG00000125703 ATG4C 467448 sc-eQTL 7.51e-01 -0.0263 0.0827 0.457 CD8_TEM L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 5.88e-01 0.0486 0.0895 0.457 CD8_TEM L2
ENSG00000162607 USP1 815283 sc-eQTL 5.85e-01 0.0467 0.0854 0.457 CD8_TEM L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 3.63e-01 0.079 0.0867 0.457 CD8_TEM L2
ENSG00000079739 PGM1 -341831 sc-eQTL 7.36e-01 0.0283 0.0837 0.455 MAIT L2
ENSG00000088035 ALG6 -115995 sc-eQTL 4.51e-01 0.0626 0.0828 0.455 MAIT L2
ENSG00000116641 DOCK7 563194 sc-eQTL 8.84e-01 0.0116 0.0794 0.455 MAIT L2
ENSG00000125703 ATG4C 467448 sc-eQTL 8.06e-01 -0.0206 0.0837 0.455 MAIT L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 7.00e-02 0.152 0.0832 0.455 MAIT L2
ENSG00000162607 USP1 815283 sc-eQTL 6.09e-02 0.156 0.0825 0.455 MAIT L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 4.48e-02 0.173 0.0855 0.455 MAIT L2
ENSG00000079739 PGM1 -341831 sc-eQTL 8.15e-01 -0.0203 0.0868 0.46 NK_CD56bright L2
ENSG00000088035 ALG6 -115995 sc-eQTL 8.04e-01 0.0221 0.089 0.46 NK_CD56bright L2
ENSG00000116641 DOCK7 563194 sc-eQTL 5.30e-01 0.0484 0.077 0.46 NK_CD56bright L2
ENSG00000125703 ATG4C 467448 sc-eQTL 2.50e-01 0.0991 0.0859 0.46 NK_CD56bright L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 6.64e-01 -0.0389 0.0897 0.46 NK_CD56bright L2
ENSG00000162607 USP1 815283 sc-eQTL 1.87e-01 -0.122 0.0921 0.46 NK_CD56bright L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 6.49e-01 0.0404 0.0884 0.46 NK_CD56bright L2
ENSG00000079739 PGM1 -341831 sc-eQTL 2.24e-01 -0.0805 0.066 0.459 NK_CD56dim L2
ENSG00000088035 ALG6 -115995 sc-eQTL 8.50e-01 0.0159 0.0841 0.459 NK_CD56dim L2
ENSG00000116641 DOCK7 563194 sc-eQTL 9.43e-01 -0.00527 0.0732 0.459 NK_CD56dim L2
ENSG00000125703 ATG4C 467448 sc-eQTL 1.40e-01 0.109 0.0739 0.459 NK_CD56dim L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 5.30e-01 -0.0532 0.0845 0.459 NK_CD56dim L2
ENSG00000162607 USP1 815283 sc-eQTL 5.84e-01 -0.045 0.082 0.459 NK_CD56dim L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 2.93e-01 -0.096 0.0911 0.459 NK_CD56dim L2
ENSG00000079739 PGM1 -341831 sc-eQTL 4.52e-01 0.0686 0.091 0.45 NK_HLA L2
ENSG00000088035 ALG6 -115995 sc-eQTL 6.37e-01 0.0447 0.0945 0.45 NK_HLA L2
ENSG00000116641 DOCK7 563194 sc-eQTL 9.78e-01 0.002 0.0723 0.45 NK_HLA L2
ENSG00000125703 ATG4C 467448 sc-eQTL 3.69e-01 -0.0756 0.0839 0.45 NK_HLA L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 4.51e-01 -0.0666 0.0881 0.45 NK_HLA L2
ENSG00000162607 USP1 815283 sc-eQTL 4.98e-01 -0.0626 0.0923 0.45 NK_HLA L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 5.81e-01 0.0464 0.084 0.45 NK_HLA L2
ENSG00000079739 PGM1 -341831 sc-eQTL 7.08e-01 -0.0272 0.0723 0.459 NK_cytokine L2
ENSG00000088035 ALG6 -115995 sc-eQTL 7.31e-01 -0.0281 0.0817 0.459 NK_cytokine L2
ENSG00000116641 DOCK7 563194 sc-eQTL 5.94e-01 -0.0404 0.0757 0.459 NK_cytokine L2
ENSG00000125703 ATG4C 467448 sc-eQTL 1.66e-01 -0.107 0.0771 0.459 NK_cytokine L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 8.29e-01 -0.0174 0.0802 0.459 NK_cytokine L2
ENSG00000162607 USP1 815283 sc-eQTL 2.22e-01 0.103 0.0841 0.459 NK_cytokine L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 4.54e-01 0.064 0.0854 0.459 NK_cytokine L2
ENSG00000079739 PGM1 -341831 sc-eQTL 6.87e-01 0.0403 0.0997 0.481 PB L2
ENSG00000088035 ALG6 -115995 sc-eQTL 3.60e-02 0.218 0.103 0.481 PB L2
ENSG00000116641 DOCK7 563194 sc-eQTL 5.25e-01 0.0714 0.112 0.481 PB L2
ENSG00000125703 ATG4C 467448 sc-eQTL 9.37e-01 -0.00778 0.0977 0.481 PB L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 4.42e-01 -0.0751 0.0973 0.481 PB L2
ENSG00000162607 USP1 815283 sc-eQTL 1.65e-01 0.135 0.0963 0.481 PB L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 8.69e-01 0.0177 0.107 0.481 PB L2
ENSG00000079739 PGM1 -341831 sc-eQTL 4.06e-01 0.0657 0.0788 0.459 Pro_T L2
ENSG00000088035 ALG6 -115995 sc-eQTL 8.49e-02 0.138 0.0798 0.459 Pro_T L2
ENSG00000116641 DOCK7 563194 sc-eQTL 9.42e-01 0.00592 0.0806 0.459 Pro_T L2
ENSG00000125703 ATG4C 467448 sc-eQTL 7.37e-01 -0.0238 0.0705 0.459 Pro_T L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 1.37e-01 -0.105 0.0704 0.459 Pro_T L2
ENSG00000162607 USP1 815283 sc-eQTL 4.75e-01 -0.0348 0.0486 0.459 Pro_T L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 6.08e-01 -0.0422 0.0822 0.459 Pro_T L2
ENSG00000079739 PGM1 -341831 sc-eQTL 8.99e-02 -0.143 0.0841 0.457 Treg L2
ENSG00000088035 ALG6 -115995 sc-eQTL 5.65e-01 0.0522 0.0904 0.457 Treg L2
ENSG00000116641 DOCK7 563194 sc-eQTL 6.38e-01 -0.0391 0.083 0.457 Treg L2
ENSG00000125703 ATG4C 467448 sc-eQTL 7.35e-01 0.0288 0.0849 0.457 Treg L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 6.85e-01 0.036 0.0888 0.457 Treg L2
ENSG00000162607 USP1 815283 sc-eQTL 7.42e-01 -0.0283 0.0859 0.457 Treg L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 7.94e-01 -0.0223 0.085 0.457 Treg L2
ENSG00000079739 PGM1 -341831 sc-eQTL 9.95e-01 0.000566 0.0842 0.456 cDC L2
ENSG00000088035 ALG6 -115995 sc-eQTL 3.53e-01 -0.0793 0.0852 0.456 cDC L2
ENSG00000116641 DOCK7 563194 sc-eQTL 6.74e-02 -0.153 0.083 0.456 cDC L2
ENSG00000125703 ATG4C 467448 sc-eQTL 1.75e-01 -0.0987 0.0724 0.456 cDC L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 2.76e-01 0.101 0.0919 0.456 cDC L2
ENSG00000162607 USP1 815283 sc-eQTL 8.74e-01 -0.0131 0.0821 0.456 cDC L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 5.88e-01 -0.0402 0.0741 0.456 cDC L2
ENSG00000079739 PGM1 -341831 sc-eQTL 6.74e-01 0.0329 0.0781 0.457 cMono_IL1B L2
ENSG00000088035 ALG6 -115995 sc-eQTL 3.49e-01 0.0732 0.0781 0.457 cMono_IL1B L2
ENSG00000116641 DOCK7 563194 sc-eQTL 7.91e-01 -0.0219 0.0825 0.457 cMono_IL1B L2
ENSG00000125703 ATG4C 467448 sc-eQTL 9.67e-01 0.00237 0.058 0.457 cMono_IL1B L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 3.75e-01 -0.0729 0.082 0.457 cMono_IL1B L2
ENSG00000162607 USP1 815283 sc-eQTL 9.56e-01 0.00401 0.0725 0.457 cMono_IL1B L2
ENSG00000079739 PGM1 -341831 sc-eQTL 4.64e-01 -0.0641 0.0874 0.457 cMono_S100A L2
ENSG00000088035 ALG6 -115995 sc-eQTL 2.74e-01 -0.0971 0.0884 0.457 cMono_S100A L2
ENSG00000116641 DOCK7 563194 sc-eQTL 9.80e-01 0.00202 0.0822 0.457 cMono_S100A L2
ENSG00000125703 ATG4C 467448 sc-eQTL 1.35e-01 -0.106 0.0708 0.457 cMono_S100A L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 2.73e-02 -0.176 0.0794 0.457 cMono_S100A L2
ENSG00000162607 USP1 815283 sc-eQTL 7.40e-02 -0.147 0.082 0.457 cMono_S100A L2
ENSG00000079739 PGM1 -341831 sc-eQTL 3.53e-01 0.094 0.101 0.421 gdT L2
ENSG00000088035 ALG6 -115995 sc-eQTL 2.16e-01 0.133 0.107 0.421 gdT L2
ENSG00000116641 DOCK7 563194 sc-eQTL 9.55e-01 0.00595 0.106 0.421 gdT L2
ENSG00000125703 ATG4C 467448 sc-eQTL 2.84e-02 0.22 0.0993 0.421 gdT L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 3.43e-01 0.102 0.107 0.421 gdT L2
ENSG00000162607 USP1 815283 sc-eQTL 9.21e-01 0.0101 0.102 0.421 gdT L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 7.58e-01 -0.0325 0.105 0.421 gdT L2
ENSG00000079739 PGM1 -341831 sc-eQTL 8.24e-01 0.0193 0.0863 0.453 intMono L2
ENSG00000088035 ALG6 -115995 sc-eQTL 5.05e-01 0.0536 0.0803 0.453 intMono L2
ENSG00000116641 DOCK7 563194 sc-eQTL 9.97e-01 0.000284 0.0821 0.453 intMono L2
ENSG00000125703 ATG4C 467448 sc-eQTL 4.19e-01 0.0634 0.0783 0.453 intMono L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 2.73e-01 -0.0946 0.0861 0.453 intMono L2
ENSG00000162607 USP1 815283 sc-eQTL 9.41e-01 0.00651 0.0878 0.453 intMono L2
ENSG00000079739 PGM1 -341831 sc-eQTL 8.22e-01 -0.0179 0.0794 0.462 ncMono L2
ENSG00000088035 ALG6 -115995 sc-eQTL 2.51e-01 0.1 0.087 0.462 ncMono L2
ENSG00000116641 DOCK7 563194 sc-eQTL 7.06e-01 -0.0325 0.0859 0.462 ncMono L2
ENSG00000125703 ATG4C 467448 sc-eQTL 3.00e-01 -0.0831 0.08 0.462 ncMono L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 6.32e-01 -0.0402 0.0839 0.462 ncMono L2
ENSG00000162607 USP1 815283 sc-eQTL 1.09e-01 0.137 0.0852 0.462 ncMono L2
ENSG00000079739 PGM1 -341831 sc-eQTL 7.54e-01 0.0305 0.0974 0.438 pDC L2
ENSG00000088035 ALG6 -115995 sc-eQTL 2.19e-01 0.116 0.0944 0.438 pDC L2
ENSG00000116641 DOCK7 563194 sc-eQTL 1.86e-01 -0.128 0.0964 0.438 pDC L2
ENSG00000125703 ATG4C 467448 sc-eQTL 9.94e-01 -0.000639 0.0869 0.438 pDC L2
ENSG00000142856 ITGB3BP -342141 sc-eQTL 1.05e-01 -0.158 0.0968 0.438 pDC L2
ENSG00000162607 USP1 815283 sc-eQTL 9.08e-01 0.0115 0.0995 0.438 pDC L2
ENSG00000203965 EFCAB7 -271792 sc-eQTL 8.56e-01 -0.0157 0.0864 0.438 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -341831 sc-eQTL 4.24e-01 0.0649 0.081 0.457 B_Memory LOneK1K
ENSG00000088035 ALG6 -115995 sc-eQTL 3.25e-01 0.0882 0.0894 0.457 B_Memory LOneK1K
ENSG00000116641 DOCK7 563194 sc-eQTL 3.91e-01 0.0667 0.0777 0.457 B_Memory LOneK1K
ENSG00000125703 ATG4C 467448 sc-eQTL 2.87e-01 -0.067 0.0627 0.457 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -342141 sc-eQTL 1.10e-01 -0.132 0.0822 0.457 B_Memory LOneK1K
ENSG00000162607 USP1 815283 sc-eQTL 7.73e-01 -0.0231 0.0802 0.457 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -271792 sc-eQTL 3.36e-01 -0.0829 0.0859 0.457 B_Memory LOneK1K
ENSG00000079739 PGM1 -341831 sc-eQTL 3.15e-01 0.0856 0.0849 0.457 B_Naive LOneK1K
ENSG00000088035 ALG6 -115995 sc-eQTL 5.99e-01 0.0461 0.0876 0.457 B_Naive LOneK1K
ENSG00000116641 DOCK7 563194 sc-eQTL 1.64e-01 -0.114 0.0815 0.457 B_Naive LOneK1K
ENSG00000125703 ATG4C 467448 sc-eQTL 2.19e-01 -0.0767 0.0622 0.457 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -342141 sc-eQTL 7.14e-01 -0.0324 0.0883 0.457 B_Naive LOneK1K
ENSG00000162607 USP1 815283 sc-eQTL 9.24e-01 0.00729 0.0759 0.457 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -271792 sc-eQTL 8.37e-01 -0.0183 0.0888 0.457 B_Naive LOneK1K
ENSG00000079739 PGM1 -341831 sc-eQTL 7.54e-01 -0.0252 0.0801 0.457 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -115995 sc-eQTL 6.39e-01 0.0365 0.0776 0.457 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 563194 sc-eQTL 7.81e-01 -0.0218 0.0781 0.457 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 467448 sc-eQTL 2.81e-01 -0.0583 0.0539 0.457 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -342141 sc-eQTL 8.48e-02 -0.137 0.0794 0.457 CD14_Mono LOneK1K
ENSG00000162607 USP1 815283 sc-eQTL 4.03e-01 -0.0571 0.0682 0.457 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -341831 sc-eQTL 4.57e-01 0.0567 0.0761 0.459 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -115995 sc-eQTL 2.90e-01 0.0914 0.0863 0.459 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 563194 sc-eQTL 7.37e-01 -0.0287 0.0856 0.459 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 467448 sc-eQTL 4.42e-01 -0.0561 0.0729 0.459 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -342141 sc-eQTL 3.39e-01 -0.081 0.0845 0.459 CD16_Mono LOneK1K
ENSG00000162607 USP1 815283 sc-eQTL 5.79e-02 0.15 0.0789 0.459 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -341831 sc-eQTL 1.10e-01 -0.104 0.0645 0.459 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -115995 sc-eQTL 8.74e-01 0.0124 0.078 0.459 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 563194 sc-eQTL 7.36e-01 -0.0236 0.0698 0.459 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 467448 sc-eQTL 9.58e-01 0.00366 0.0697 0.459 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -342141 sc-eQTL 4.19e-01 -0.0668 0.0825 0.459 NK_CD56dim LOneK1K
ENSG00000162607 USP1 815283 sc-eQTL 7.93e-01 0.0197 0.075 0.459 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -271792 sc-eQTL 5.97e-01 -0.0483 0.0912 0.459 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -341831 eQTL 0.00199 0.0546 0.0176 0.0 0.0 0.414
ENSG00000142856 ITGB3BP -342141 eQTL 0.047 -0.0576 0.029 0.0 0.0 0.414

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -341831 1.26e-06 9.37e-07 3.03e-07 3.38e-07 2.46e-07 3.69e-07 8.96e-07 3.25e-07 1.13e-06 3.8e-07 1.25e-06 5.6e-07 1.46e-06 2.33e-07 4.12e-07 6.7e-07 7.7e-07 5.54e-07 4.95e-07 6.07e-07 3.49e-07 9.57e-07 7.08e-07 5.76e-07 1.7e-06 3.17e-07 6.19e-07 5.29e-07 9.32e-07 1.02e-06 5.1e-07 4.97e-08 1.79e-07 4.83e-07 3.66e-07 4.12e-07 3.79e-07 1.53e-07 1.5e-07 9.13e-08 2.85e-07 1.23e-06 7.66e-08 1.24e-08 1.88e-07 7.43e-08 1.88e-07 8.97e-08 9.42e-08