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Genes within 1Mb (chr1:63236886:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -356525 sc-eQTL 2.14e-01 0.0899 0.0722 0.462 B L1
ENSG00000088035 ALG6 -130689 sc-eQTL 2.07e-01 0.0948 0.0748 0.462 B L1
ENSG00000116641 DOCK7 548500 sc-eQTL 6.50e-01 -0.0341 0.0751 0.462 B L1
ENSG00000125703 ATG4C 452754 sc-eQTL 5.22e-01 -0.0335 0.0522 0.462 B L1
ENSG00000142856 ITGB3BP -356835 sc-eQTL 6.62e-01 -0.0364 0.083 0.462 B L1
ENSG00000162607 USP1 800589 sc-eQTL 7.23e-01 -0.0256 0.0721 0.462 B L1
ENSG00000203965 EFCAB7 -286486 sc-eQTL 3.50e-01 -0.0796 0.0849 0.462 B L1
ENSG00000079739 PGM1 -356525 sc-eQTL 2.08e-01 0.0783 0.0619 0.462 CD4T L1
ENSG00000088035 ALG6 -130689 sc-eQTL 7.75e-01 -0.0196 0.0686 0.462 CD4T L1
ENSG00000116641 DOCK7 548500 sc-eQTL 3.53e-01 -0.0646 0.0693 0.462 CD4T L1
ENSG00000125703 ATG4C 452754 sc-eQTL 5.75e-01 -0.0314 0.056 0.462 CD4T L1
ENSG00000142856 ITGB3BP -356835 sc-eQTL 8.64e-01 -0.0137 0.0796 0.462 CD4T L1
ENSG00000162607 USP1 800589 sc-eQTL 4.02e-01 -0.0456 0.0543 0.462 CD4T L1
ENSG00000203965 EFCAB7 -286486 sc-eQTL 7.01e-01 -0.0274 0.0714 0.462 CD4T L1
ENSG00000079739 PGM1 -356525 sc-eQTL 8.30e-01 -0.0146 0.0679 0.462 CD8T L1
ENSG00000088035 ALG6 -130689 sc-eQTL 6.00e-01 0.0393 0.0748 0.462 CD8T L1
ENSG00000116641 DOCK7 548500 sc-eQTL 2.25e-01 -0.0919 0.0756 0.462 CD8T L1
ENSG00000125703 ATG4C 452754 sc-eQTL 5.94e-01 0.0385 0.072 0.462 CD8T L1
ENSG00000142856 ITGB3BP -356835 sc-eQTL 2.66e-01 -0.0896 0.0803 0.462 CD8T L1
ENSG00000162607 USP1 800589 sc-eQTL 9.03e-01 -0.00763 0.0628 0.462 CD8T L1
ENSG00000203965 EFCAB7 -286486 sc-eQTL 5.06e-01 0.0534 0.0802 0.462 CD8T L1
ENSG00000079739 PGM1 -356525 sc-eQTL 1.70e-01 -0.104 0.0756 0.462 DC L1
ENSG00000088035 ALG6 -130689 sc-eQTL 4.62e-01 0.0577 0.0783 0.462 DC L1
ENSG00000116641 DOCK7 548500 sc-eQTL 2.73e-02 -0.176 0.0794 0.462 DC L1
ENSG00000125703 ATG4C 452754 sc-eQTL 1.11e-01 -0.1 0.0625 0.462 DC L1
ENSG00000142856 ITGB3BP -356835 sc-eQTL 6.24e-01 -0.0431 0.0878 0.462 DC L1
ENSG00000162607 USP1 800589 sc-eQTL 7.97e-01 -0.0198 0.0767 0.462 DC L1
ENSG00000203965 EFCAB7 -286486 sc-eQTL 8.10e-01 -0.0184 0.0765 0.462 DC L1
ENSG00000079739 PGM1 -356525 sc-eQTL 8.61e-01 -0.0132 0.0756 0.462 Mono L1
ENSG00000088035 ALG6 -130689 sc-eQTL 7.53e-01 0.0248 0.0788 0.462 Mono L1
ENSG00000116641 DOCK7 548500 sc-eQTL 3.03e-01 -0.0785 0.0761 0.462 Mono L1
ENSG00000125703 ATG4C 452754 sc-eQTL 2.99e-01 -0.0536 0.0514 0.462 Mono L1
ENSG00000142856 ITGB3BP -356835 sc-eQTL 7.01e-02 -0.147 0.0808 0.462 Mono L1
ENSG00000162607 USP1 800589 sc-eQTL 6.87e-01 -0.0269 0.0669 0.462 Mono L1
ENSG00000079739 PGM1 -356525 sc-eQTL 1.11e-01 -0.101 0.0628 0.461 NK L1
ENSG00000088035 ALG6 -130689 sc-eQTL 9.07e-01 0.00869 0.0741 0.461 NK L1
ENSG00000116641 DOCK7 548500 sc-eQTL 8.16e-01 0.0142 0.061 0.461 NK L1
ENSG00000125703 ATG4C 452754 sc-eQTL 7.72e-01 0.019 0.0655 0.461 NK L1
ENSG00000142856 ITGB3BP -356835 sc-eQTL 2.89e-01 -0.0863 0.0812 0.461 NK L1
ENSG00000162607 USP1 800589 sc-eQTL 6.06e-01 -0.0375 0.0727 0.461 NK L1
ENSG00000203965 EFCAB7 -286486 sc-eQTL 9.46e-01 -0.00599 0.0884 0.461 NK L1
ENSG00000079739 PGM1 -356525 sc-eQTL 2.53e-01 0.0841 0.0733 0.462 Other_T L1
ENSG00000088035 ALG6 -130689 sc-eQTL 1.17e-01 0.116 0.0735 0.462 Other_T L1
ENSG00000116641 DOCK7 548500 sc-eQTL 4.68e-01 0.0548 0.0754 0.462 Other_T L1
ENSG00000125703 ATG4C 452754 sc-eQTL 9.04e-01 0.00786 0.0653 0.462 Other_T L1
ENSG00000142856 ITGB3BP -356835 sc-eQTL 9.80e-01 -0.00147 0.0579 0.462 Other_T L1
ENSG00000162607 USP1 800589 sc-eQTL 8.38e-01 0.0103 0.0502 0.462 Other_T L1
ENSG00000203965 EFCAB7 -286486 sc-eQTL 2.36e-01 0.106 0.0891 0.462 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -356525 sc-eQTL 9.77e-01 0.00271 0.0942 0.462 B_Activated L2
ENSG00000088035 ALG6 -130689 sc-eQTL 9.31e-01 -0.00782 0.0902 0.462 B_Activated L2
ENSG00000116641 DOCK7 548500 sc-eQTL 8.25e-01 0.0186 0.084 0.462 B_Activated L2
ENSG00000125703 ATG4C 452754 sc-eQTL 9.24e-01 0.00849 0.0884 0.462 B_Activated L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 6.32e-02 -0.16 0.0855 0.462 B_Activated L2
ENSG00000162607 USP1 800589 sc-eQTL 2.19e-01 -0.115 0.0932 0.462 B_Activated L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 3.63e-01 -0.0743 0.0815 0.462 B_Activated L2
ENSG00000079739 PGM1 -356525 sc-eQTL 2.60e-01 0.0985 0.0872 0.459 B_Intermediate L2
ENSG00000088035 ALG6 -130689 sc-eQTL 8.29e-01 -0.0192 0.0888 0.459 B_Intermediate L2
ENSG00000116641 DOCK7 548500 sc-eQTL 4.05e-01 0.0707 0.0847 0.459 B_Intermediate L2
ENSG00000125703 ATG4C 452754 sc-eQTL 1.13e-01 -0.113 0.0714 0.459 B_Intermediate L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 5.06e-01 -0.0569 0.0855 0.459 B_Intermediate L2
ENSG00000162607 USP1 800589 sc-eQTL 6.05e-01 -0.0443 0.0854 0.459 B_Intermediate L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 4.75e-01 0.0606 0.0846 0.459 B_Intermediate L2
ENSG00000079739 PGM1 -356525 sc-eQTL 3.07e-01 0.0864 0.0843 0.457 B_Memory L2
ENSG00000088035 ALG6 -130689 sc-eQTL 7.22e-03 0.229 0.0845 0.457 B_Memory L2
ENSG00000116641 DOCK7 548500 sc-eQTL 9.39e-01 0.00621 0.0806 0.457 B_Memory L2
ENSG00000125703 ATG4C 452754 sc-eQTL 3.80e-01 -0.0673 0.0765 0.457 B_Memory L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 3.24e-01 -0.0865 0.0875 0.457 B_Memory L2
ENSG00000162607 USP1 800589 sc-eQTL 1.40e-01 0.13 0.088 0.457 B_Memory L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 2.41e-01 -0.102 0.0867 0.457 B_Memory L2
ENSG00000079739 PGM1 -356525 sc-eQTL 4.40e-01 0.0672 0.0869 0.462 B_Naive1 L2
ENSG00000088035 ALG6 -130689 sc-eQTL 3.69e-01 0.0785 0.0872 0.462 B_Naive1 L2
ENSG00000116641 DOCK7 548500 sc-eQTL 2.53e-01 -0.0956 0.0834 0.462 B_Naive1 L2
ENSG00000125703 ATG4C 452754 sc-eQTL 8.93e-02 -0.109 0.064 0.462 B_Naive1 L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 4.09e-01 -0.0707 0.0854 0.462 B_Naive1 L2
ENSG00000162607 USP1 800589 sc-eQTL 8.73e-01 -0.0121 0.0752 0.462 B_Naive1 L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 6.71e-01 -0.0388 0.0912 0.462 B_Naive1 L2
ENSG00000079739 PGM1 -356525 sc-eQTL 6.30e-01 0.0412 0.0853 0.459 B_Naive2 L2
ENSG00000088035 ALG6 -130689 sc-eQTL 7.49e-01 -0.0285 0.089 0.459 B_Naive2 L2
ENSG00000116641 DOCK7 548500 sc-eQTL 8.94e-01 -0.0115 0.0856 0.459 B_Naive2 L2
ENSG00000125703 ATG4C 452754 sc-eQTL 5.18e-01 -0.0533 0.0823 0.459 B_Naive2 L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 6.00e-01 0.0469 0.0893 0.459 B_Naive2 L2
ENSG00000162607 USP1 800589 sc-eQTL 7.29e-01 -0.0295 0.085 0.459 B_Naive2 L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 7.25e-01 0.0314 0.0889 0.459 B_Naive2 L2
ENSG00000079739 PGM1 -356525 sc-eQTL 2.60e-01 -0.0963 0.0852 0.461 CD4_CTL L2
ENSG00000088035 ALG6 -130689 sc-eQTL 8.91e-01 0.0124 0.0903 0.461 CD4_CTL L2
ENSG00000116641 DOCK7 548500 sc-eQTL 5.30e-01 0.0496 0.0789 0.461 CD4_CTL L2
ENSG00000125703 ATG4C 452754 sc-eQTL 1.59e-01 -0.115 0.0813 0.461 CD4_CTL L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 5.62e-01 0.0507 0.0873 0.461 CD4_CTL L2
ENSG00000162607 USP1 800589 sc-eQTL 6.79e-02 -0.151 0.0825 0.461 CD4_CTL L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 8.14e-01 -0.0196 0.083 0.461 CD4_CTL L2
ENSG00000079739 PGM1 -356525 sc-eQTL 6.54e-02 0.129 0.0696 0.462 CD4_Naive L2
ENSG00000088035 ALG6 -130689 sc-eQTL 3.33e-01 -0.0739 0.0761 0.462 CD4_Naive L2
ENSG00000116641 DOCK7 548500 sc-eQTL 3.94e-01 -0.0639 0.0748 0.462 CD4_Naive L2
ENSG00000125703 ATG4C 452754 sc-eQTL 3.96e-01 -0.0563 0.0661 0.462 CD4_Naive L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 7.55e-01 -0.0253 0.0809 0.462 CD4_Naive L2
ENSG00000162607 USP1 800589 sc-eQTL 3.22e-01 -0.0613 0.0617 0.462 CD4_Naive L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 2.14e-01 -0.0997 0.0801 0.462 CD4_Naive L2
ENSG00000079739 PGM1 -356525 sc-eQTL 3.29e-01 0.0706 0.0722 0.462 CD4_TCM L2
ENSG00000088035 ALG6 -130689 sc-eQTL 8.80e-01 -0.0127 0.084 0.462 CD4_TCM L2
ENSG00000116641 DOCK7 548500 sc-eQTL 7.29e-01 -0.0258 0.0744 0.462 CD4_TCM L2
ENSG00000125703 ATG4C 452754 sc-eQTL 9.99e-01 7.45e-05 0.0725 0.462 CD4_TCM L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 7.52e-01 -0.0271 0.0854 0.462 CD4_TCM L2
ENSG00000162607 USP1 800589 sc-eQTL 7.51e-01 0.0222 0.07 0.462 CD4_TCM L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 7.46e-01 -0.0268 0.0827 0.462 CD4_TCM L2
ENSG00000079739 PGM1 -356525 sc-eQTL 1.53e-01 -0.123 0.0856 0.462 CD4_TEM L2
ENSG00000088035 ALG6 -130689 sc-eQTL 3.73e-01 0.0769 0.0862 0.462 CD4_TEM L2
ENSG00000116641 DOCK7 548500 sc-eQTL 3.32e-01 -0.0816 0.084 0.462 CD4_TEM L2
ENSG00000125703 ATG4C 452754 sc-eQTL 2.82e-01 0.0879 0.0816 0.462 CD4_TEM L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 6.78e-01 0.0351 0.0844 0.462 CD4_TEM L2
ENSG00000162607 USP1 800589 sc-eQTL 5.27e-01 -0.0507 0.0799 0.462 CD4_TEM L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 4.38e-01 0.0679 0.0874 0.462 CD4_TEM L2
ENSG00000079739 PGM1 -356525 sc-eQTL 1.94e-01 -0.101 0.0773 0.462 CD8_CTL L2
ENSG00000088035 ALG6 -130689 sc-eQTL 6.77e-01 0.0344 0.0824 0.462 CD8_CTL L2
ENSG00000116641 DOCK7 548500 sc-eQTL 5.74e-01 -0.044 0.0782 0.462 CD8_CTL L2
ENSG00000125703 ATG4C 452754 sc-eQTL 5.47e-01 0.0502 0.0832 0.462 CD8_CTL L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 6.79e-01 0.0359 0.0866 0.462 CD8_CTL L2
ENSG00000162607 USP1 800589 sc-eQTL 2.90e-01 0.0822 0.0774 0.462 CD8_CTL L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 3.57e-01 0.0817 0.0886 0.462 CD8_CTL L2
ENSG00000079739 PGM1 -356525 sc-eQTL 9.53e-01 -0.00465 0.0794 0.462 CD8_Naive L2
ENSG00000088035 ALG6 -130689 sc-eQTL 8.02e-01 0.0206 0.0821 0.462 CD8_Naive L2
ENSG00000116641 DOCK7 548500 sc-eQTL 1.76e-01 -0.115 0.0846 0.462 CD8_Naive L2
ENSG00000125703 ATG4C 452754 sc-eQTL 4.93e-01 -0.0559 0.0814 0.462 CD8_Naive L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 1.91e-01 -0.108 0.0822 0.462 CD8_Naive L2
ENSG00000162607 USP1 800589 sc-eQTL 1.56e-01 -0.099 0.0695 0.462 CD8_Naive L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 1.85e-01 -0.103 0.0775 0.462 CD8_Naive L2
ENSG00000079739 PGM1 -356525 sc-eQTL 4.86e-01 -0.0621 0.089 0.456 CD8_TCM L2
ENSG00000088035 ALG6 -130689 sc-eQTL 4.58e-02 -0.18 0.0893 0.456 CD8_TCM L2
ENSG00000116641 DOCK7 548500 sc-eQTL 6.33e-01 0.0421 0.088 0.456 CD8_TCM L2
ENSG00000125703 ATG4C 452754 sc-eQTL 2.25e-01 0.109 0.0897 0.456 CD8_TCM L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 1.22e-01 -0.135 0.087 0.456 CD8_TCM L2
ENSG00000162607 USP1 800589 sc-eQTL 8.26e-01 -0.0185 0.0842 0.456 CD8_TCM L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 4.72e-01 0.0641 0.0891 0.456 CD8_TCM L2
ENSG00000079739 PGM1 -356525 sc-eQTL 9.28e-01 0.00793 0.0875 0.461 CD8_TEM L2
ENSG00000088035 ALG6 -130689 sc-eQTL 5.27e-01 0.0555 0.0877 0.461 CD8_TEM L2
ENSG00000116641 DOCK7 548500 sc-eQTL 8.51e-01 0.016 0.0851 0.461 CD8_TEM L2
ENSG00000125703 ATG4C 452754 sc-eQTL 9.20e-01 -0.00824 0.0818 0.461 CD8_TEM L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 6.21e-01 0.0438 0.0885 0.461 CD8_TEM L2
ENSG00000162607 USP1 800589 sc-eQTL 5.30e-01 0.0531 0.0844 0.461 CD8_TEM L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 2.78e-01 0.0932 0.0856 0.461 CD8_TEM L2
ENSG00000079739 PGM1 -356525 sc-eQTL 7.65e-01 0.0249 0.0829 0.459 MAIT L2
ENSG00000088035 ALG6 -130689 sc-eQTL 4.41e-01 0.0633 0.082 0.459 MAIT L2
ENSG00000116641 DOCK7 548500 sc-eQTL 8.56e-01 0.0143 0.0787 0.459 MAIT L2
ENSG00000125703 ATG4C 452754 sc-eQTL 8.13e-01 -0.0196 0.0829 0.459 MAIT L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 8.59e-02 0.142 0.0825 0.459 MAIT L2
ENSG00000162607 USP1 800589 sc-eQTL 7.62e-02 0.146 0.0818 0.459 MAIT L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 4.38e-02 0.172 0.0847 0.459 MAIT L2
ENSG00000079739 PGM1 -356525 sc-eQTL 7.53e-01 -0.0271 0.0858 0.464 NK_CD56bright L2
ENSG00000088035 ALG6 -130689 sc-eQTL 6.85e-01 0.0357 0.0879 0.464 NK_CD56bright L2
ENSG00000116641 DOCK7 548500 sc-eQTL 3.82e-01 0.0666 0.0761 0.464 NK_CD56bright L2
ENSG00000125703 ATG4C 452754 sc-eQTL 2.42e-01 0.0996 0.0849 0.464 NK_CD56bright L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 7.06e-01 -0.0335 0.0886 0.464 NK_CD56bright L2
ENSG00000162607 USP1 800589 sc-eQTL 1.64e-01 -0.127 0.091 0.464 NK_CD56bright L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 6.81e-01 0.036 0.0874 0.464 NK_CD56bright L2
ENSG00000079739 PGM1 -356525 sc-eQTL 2.79e-01 -0.071 0.0654 0.463 NK_CD56dim L2
ENSG00000088035 ALG6 -130689 sc-eQTL 9.38e-01 0.00644 0.0832 0.463 NK_CD56dim L2
ENSG00000116641 DOCK7 548500 sc-eQTL 9.29e-01 0.00645 0.0724 0.463 NK_CD56dim L2
ENSG00000125703 ATG4C 452754 sc-eQTL 1.44e-01 0.107 0.0731 0.463 NK_CD56dim L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 5.21e-01 -0.0538 0.0836 0.463 NK_CD56dim L2
ENSG00000162607 USP1 800589 sc-eQTL 6.51e-01 -0.0367 0.0811 0.463 NK_CD56dim L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 2.70e-01 -0.0996 0.0901 0.463 NK_CD56dim L2
ENSG00000079739 PGM1 -356525 sc-eQTL 4.66e-01 0.0656 0.0899 0.454 NK_HLA L2
ENSG00000088035 ALG6 -130689 sc-eQTL 4.59e-01 0.0692 0.0932 0.454 NK_HLA L2
ENSG00000116641 DOCK7 548500 sc-eQTL 7.50e-01 0.0228 0.0714 0.454 NK_HLA L2
ENSG00000125703 ATG4C 452754 sc-eQTL 5.54e-01 -0.0491 0.083 0.454 NK_HLA L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 5.71e-01 -0.0494 0.0871 0.454 NK_HLA L2
ENSG00000162607 USP1 800589 sc-eQTL 4.29e-01 -0.0722 0.0911 0.454 NK_HLA L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 5.72e-01 0.0469 0.083 0.454 NK_HLA L2
ENSG00000079739 PGM1 -356525 sc-eQTL 7.30e-01 -0.0247 0.0716 0.463 NK_cytokine L2
ENSG00000088035 ALG6 -130689 sc-eQTL 6.29e-01 -0.0391 0.0808 0.463 NK_cytokine L2
ENSG00000116641 DOCK7 548500 sc-eQTL 6.63e-01 -0.0327 0.0749 0.463 NK_cytokine L2
ENSG00000125703 ATG4C 452754 sc-eQTL 1.69e-01 -0.105 0.0763 0.463 NK_cytokine L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 7.32e-01 -0.0272 0.0794 0.463 NK_cytokine L2
ENSG00000162607 USP1 800589 sc-eQTL 1.66e-01 0.116 0.0831 0.463 NK_cytokine L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 4.56e-01 0.0631 0.0845 0.463 NK_cytokine L2
ENSG00000079739 PGM1 -356525 sc-eQTL 6.87e-01 0.0403 0.0997 0.481 PB L2
ENSG00000088035 ALG6 -130689 sc-eQTL 3.60e-02 0.218 0.103 0.481 PB L2
ENSG00000116641 DOCK7 548500 sc-eQTL 5.25e-01 0.0714 0.112 0.481 PB L2
ENSG00000125703 ATG4C 452754 sc-eQTL 9.37e-01 -0.00778 0.0977 0.481 PB L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 4.42e-01 -0.0751 0.0973 0.481 PB L2
ENSG00000162607 USP1 800589 sc-eQTL 1.65e-01 0.135 0.0963 0.481 PB L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 8.69e-01 0.0177 0.107 0.481 PB L2
ENSG00000079739 PGM1 -356525 sc-eQTL 4.66e-01 0.0573 0.0784 0.463 Pro_T L2
ENSG00000088035 ALG6 -130689 sc-eQTL 8.54e-02 0.137 0.0793 0.463 Pro_T L2
ENSG00000116641 DOCK7 548500 sc-eQTL 9.41e-01 -0.00598 0.0801 0.463 Pro_T L2
ENSG00000125703 ATG4C 452754 sc-eQTL 8.59e-01 -0.0125 0.0702 0.463 Pro_T L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 1.65e-01 -0.0977 0.07 0.463 Pro_T L2
ENSG00000162607 USP1 800589 sc-eQTL 3.99e-01 -0.0408 0.0483 0.463 Pro_T L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 5.50e-01 -0.0489 0.0817 0.463 Pro_T L2
ENSG00000079739 PGM1 -356525 sc-eQTL 8.07e-02 -0.146 0.0831 0.462 Treg L2
ENSG00000088035 ALG6 -130689 sc-eQTL 5.51e-01 0.0534 0.0895 0.462 Treg L2
ENSG00000116641 DOCK7 548500 sc-eQTL 5.73e-01 -0.0463 0.0821 0.462 Treg L2
ENSG00000125703 ATG4C 452754 sc-eQTL 6.50e-01 0.0382 0.0839 0.462 Treg L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 7.71e-01 0.0257 0.0879 0.462 Treg L2
ENSG00000162607 USP1 800589 sc-eQTL 8.02e-01 -0.0214 0.085 0.462 Treg L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 8.49e-01 -0.016 0.0841 0.462 Treg L2
ENSG00000079739 PGM1 -356525 sc-eQTL 9.82e-01 0.00193 0.0833 0.461 cDC L2
ENSG00000088035 ALG6 -130689 sc-eQTL 2.97e-01 -0.0881 0.0843 0.461 cDC L2
ENSG00000116641 DOCK7 548500 sc-eQTL 6.72e-02 -0.151 0.0822 0.461 cDC L2
ENSG00000125703 ATG4C 452754 sc-eQTL 1.93e-01 -0.0937 0.0717 0.461 cDC L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 2.25e-01 0.111 0.0909 0.461 cDC L2
ENSG00000162607 USP1 800589 sc-eQTL 7.45e-01 -0.0265 0.0812 0.461 cDC L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 5.44e-01 -0.0446 0.0733 0.461 cDC L2
ENSG00000079739 PGM1 -356525 sc-eQTL 6.54e-01 0.0348 0.0775 0.462 cMono_IL1B L2
ENSG00000088035 ALG6 -130689 sc-eQTL 2.33e-01 0.0926 0.0774 0.462 cMono_IL1B L2
ENSG00000116641 DOCK7 548500 sc-eQTL 6.34e-01 -0.039 0.0818 0.462 cMono_IL1B L2
ENSG00000125703 ATG4C 452754 sc-eQTL 9.23e-01 -0.00556 0.0576 0.462 cMono_IL1B L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 3.66e-01 -0.0738 0.0814 0.462 cMono_IL1B L2
ENSG00000162607 USP1 800589 sc-eQTL 8.92e-01 -0.00975 0.0719 0.462 cMono_IL1B L2
ENSG00000079739 PGM1 -356525 sc-eQTL 5.06e-01 -0.0578 0.0868 0.462 cMono_S100A L2
ENSG00000088035 ALG6 -130689 sc-eQTL 1.73e-01 -0.12 0.0876 0.462 cMono_S100A L2
ENSG00000116641 DOCK7 548500 sc-eQTL 8.91e-01 0.0112 0.0816 0.462 cMono_S100A L2
ENSG00000125703 ATG4C 452754 sc-eQTL 1.23e-01 -0.109 0.0703 0.462 cMono_S100A L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 2.20e-02 -0.182 0.0787 0.462 cMono_S100A L2
ENSG00000162607 USP1 800589 sc-eQTL 5.02e-02 -0.16 0.0813 0.462 cMono_S100A L2
ENSG00000079739 PGM1 -356525 sc-eQTL 4.29e-01 0.0785 0.0989 0.427 gdT L2
ENSG00000088035 ALG6 -130689 sc-eQTL 1.67e-01 0.146 0.105 0.427 gdT L2
ENSG00000116641 DOCK7 548500 sc-eQTL 9.17e-01 0.0109 0.104 0.427 gdT L2
ENSG00000125703 ATG4C 452754 sc-eQTL 3.77e-02 0.205 0.0976 0.427 gdT L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 3.31e-01 0.102 0.105 0.427 gdT L2
ENSG00000162607 USP1 800589 sc-eQTL 9.97e-01 0.000421 0.0996 0.427 gdT L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 6.66e-01 -0.0448 0.103 0.427 gdT L2
ENSG00000079739 PGM1 -356525 sc-eQTL 8.49e-01 0.0164 0.086 0.458 intMono L2
ENSG00000088035 ALG6 -130689 sc-eQTL 5.07e-01 0.0531 0.08 0.458 intMono L2
ENSG00000116641 DOCK7 548500 sc-eQTL 9.43e-01 0.0059 0.0818 0.458 intMono L2
ENSG00000125703 ATG4C 452754 sc-eQTL 4.21e-01 0.0629 0.078 0.458 intMono L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 2.00e-01 -0.11 0.0857 0.458 intMono L2
ENSG00000162607 USP1 800589 sc-eQTL 8.84e-01 0.0128 0.0875 0.458 intMono L2
ENSG00000079739 PGM1 -356525 sc-eQTL 8.73e-01 -0.0126 0.0786 0.466 ncMono L2
ENSG00000088035 ALG6 -130689 sc-eQTL 3.01e-01 0.0893 0.0862 0.466 ncMono L2
ENSG00000116641 DOCK7 548500 sc-eQTL 6.65e-01 -0.0369 0.085 0.466 ncMono L2
ENSG00000125703 ATG4C 452754 sc-eQTL 3.21e-01 -0.0788 0.0792 0.466 ncMono L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 6.18e-01 -0.0415 0.083 0.466 ncMono L2
ENSG00000162607 USP1 800589 sc-eQTL 1.19e-01 0.132 0.0844 0.466 ncMono L2
ENSG00000079739 PGM1 -356525 sc-eQTL 8.70e-01 0.0159 0.0966 0.441 pDC L2
ENSG00000088035 ALG6 -130689 sc-eQTL 1.90e-01 0.123 0.0936 0.441 pDC L2
ENSG00000116641 DOCK7 548500 sc-eQTL 1.91e-01 -0.125 0.0956 0.441 pDC L2
ENSG00000125703 ATG4C 452754 sc-eQTL 9.75e-01 0.00266 0.0862 0.441 pDC L2
ENSG00000142856 ITGB3BP -356835 sc-eQTL 9.60e-02 -0.161 0.0959 0.441 pDC L2
ENSG00000162607 USP1 800589 sc-eQTL 9.55e-01 0.00559 0.0986 0.441 pDC L2
ENSG00000203965 EFCAB7 -286486 sc-eQTL 9.42e-01 -0.00621 0.0857 0.441 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -356525 sc-eQTL 4.28e-01 0.0637 0.0802 0.462 B_Memory LOneK1K
ENSG00000088035 ALG6 -130689 sc-eQTL 3.34e-01 0.0859 0.0886 0.462 B_Memory LOneK1K
ENSG00000116641 DOCK7 548500 sc-eQTL 2.68e-01 0.0854 0.0769 0.462 B_Memory LOneK1K
ENSG00000125703 ATG4C 452754 sc-eQTL 2.46e-01 -0.0723 0.0621 0.462 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -356835 sc-eQTL 1.28e-01 -0.124 0.0814 0.462 B_Memory LOneK1K
ENSG00000162607 USP1 800589 sc-eQTL 9.93e-01 0.000703 0.0795 0.462 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -286486 sc-eQTL 3.97e-01 -0.0724 0.0852 0.462 B_Memory LOneK1K
ENSG00000079739 PGM1 -356525 sc-eQTL 3.06e-01 0.0864 0.0841 0.462 B_Naive LOneK1K
ENSG00000088035 ALG6 -130689 sc-eQTL 5.24e-01 0.0554 0.0868 0.462 B_Naive LOneK1K
ENSG00000116641 DOCK7 548500 sc-eQTL 1.41e-01 -0.119 0.0807 0.462 B_Naive LOneK1K
ENSG00000125703 ATG4C 452754 sc-eQTL 2.25e-01 -0.0751 0.0617 0.462 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -356835 sc-eQTL 7.37e-01 -0.0295 0.0875 0.462 B_Naive LOneK1K
ENSG00000162607 USP1 800589 sc-eQTL 7.67e-01 0.0223 0.0752 0.462 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -286486 sc-eQTL 7.51e-01 -0.0279 0.0879 0.462 B_Naive LOneK1K
ENSG00000079739 PGM1 -356525 sc-eQTL 8.12e-01 -0.019 0.0795 0.462 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -130689 sc-eQTL 5.82e-01 0.0424 0.0769 0.462 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 548500 sc-eQTL 6.99e-01 -0.03 0.0775 0.462 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 452754 sc-eQTL 2.23e-01 -0.0653 0.0534 0.462 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -356835 sc-eQTL 7.86e-02 -0.139 0.0787 0.462 CD14_Mono LOneK1K
ENSG00000162607 USP1 800589 sc-eQTL 2.51e-01 -0.0777 0.0675 0.462 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -356525 sc-eQTL 4.30e-01 0.0595 0.0753 0.463 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -130689 sc-eQTL 3.60e-01 0.0784 0.0855 0.463 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 548500 sc-eQTL 6.62e-01 -0.0371 0.0847 0.463 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 452754 sc-eQTL 4.83e-01 -0.0507 0.0722 0.463 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -356835 sc-eQTL 2.77e-01 -0.0912 0.0837 0.463 CD16_Mono LOneK1K
ENSG00000162607 USP1 800589 sc-eQTL 5.50e-02 0.151 0.0781 0.463 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -356525 sc-eQTL 1.41e-01 -0.0943 0.0639 0.463 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -130689 sc-eQTL 9.87e-01 0.00129 0.0771 0.463 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 548500 sc-eQTL 8.58e-01 -0.0124 0.069 0.463 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 452754 sc-eQTL 8.91e-01 0.00941 0.0689 0.463 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -356835 sc-eQTL 4.03e-01 -0.0683 0.0815 0.463 NK_CD56dim LOneK1K
ENSG00000162607 USP1 800589 sc-eQTL 6.67e-01 0.0319 0.0741 0.463 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -286486 sc-eQTL 5.78e-01 -0.0502 0.0901 0.463 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -356525 eQTL 0.00115 0.0571 0.0175 0.0 0.0 0.414
ENSG00000142856 ITGB3BP -356835 eQTL 0.0403 -0.0592 0.0288 0.0 0.0 0.414

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -356525 1.26e-06 8.47e-07 2.81e-07 4.14e-07 1.64e-07 3.2e-07 7.02e-07 2.68e-07 8.29e-07 2.69e-07 1.09e-06 5.55e-07 1.21e-06 1.97e-07 4.03e-07 4.91e-07 6.83e-07 5.16e-07 3.64e-07 3.57e-07 2.57e-07 6.27e-07 5.49e-07 3.93e-07 1.39e-06 2.48e-07 5.24e-07 4.29e-07 6.84e-07 8.5e-07 4.32e-07 4.53e-08 1.32e-07 2.46e-07 3.26e-07 2.89e-07 1.93e-07 1.42e-07 1.12e-07 1.83e-08 1.67e-07 8.03e-07 6.81e-08 5.87e-09 1.89e-07 4.48e-08 1.9e-07 8.41e-08 6.58e-08