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Genes within 1Mb (chr1:63215053:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -378358 sc-eQTL 6.86e-01 0.0378 0.0935 0.818 B L1
ENSG00000088035 ALG6 -152522 sc-eQTL 1.22e-04 0.366 0.0936 0.818 B L1
ENSG00000116641 DOCK7 526667 sc-eQTL 9.15e-01 -0.0104 0.0969 0.818 B L1
ENSG00000125703 ATG4C 430921 sc-eQTL 8.20e-01 -0.0153 0.0674 0.818 B L1
ENSG00000142856 ITGB3BP -378668 sc-eQTL 4.18e-01 0.087 0.107 0.818 B L1
ENSG00000162607 USP1 778756 sc-eQTL 2.60e-01 0.105 0.0928 0.818 B L1
ENSG00000203965 EFCAB7 -308319 sc-eQTL 4.83e-01 -0.0771 0.11 0.818 B L1
ENSG00000079739 PGM1 -378358 sc-eQTL 8.93e-01 0.0107 0.0794 0.818 CD4T L1
ENSG00000088035 ALG6 -152522 sc-eQTL 3.11e-01 -0.0889 0.0874 0.818 CD4T L1
ENSG00000116641 DOCK7 526667 sc-eQTL 2.96e-01 -0.0928 0.0885 0.818 CD4T L1
ENSG00000125703 ATG4C 430921 sc-eQTL 1.10e-01 -0.114 0.0712 0.818 CD4T L1
ENSG00000142856 ITGB3BP -378668 sc-eQTL 4.72e-01 0.0732 0.102 0.818 CD4T L1
ENSG00000162607 USP1 778756 sc-eQTL 7.68e-01 0.0205 0.0695 0.818 CD4T L1
ENSG00000203965 EFCAB7 -308319 sc-eQTL 5.27e-01 -0.0578 0.0912 0.818 CD4T L1
ENSG00000079739 PGM1 -378358 sc-eQTL 9.21e-01 0.00876 0.0877 0.818 CD8T L1
ENSG00000088035 ALG6 -152522 sc-eQTL 2.45e-01 -0.113 0.0964 0.818 CD8T L1
ENSG00000116641 DOCK7 526667 sc-eQTL 2.03e-01 -0.125 0.0976 0.818 CD8T L1
ENSG00000125703 ATG4C 430921 sc-eQTL 4.47e-01 0.0708 0.093 0.818 CD8T L1
ENSG00000142856 ITGB3BP -378668 sc-eQTL 8.43e-01 0.0206 0.104 0.818 CD8T L1
ENSG00000162607 USP1 778756 sc-eQTL 2.37e-01 0.0959 0.0808 0.818 CD8T L1
ENSG00000203965 EFCAB7 -308319 sc-eQTL 8.30e-01 0.0223 0.104 0.818 CD8T L1
ENSG00000079739 PGM1 -378358 sc-eQTL 5.30e-01 -0.0618 0.0982 0.82 DC L1
ENSG00000088035 ALG6 -152522 sc-eQTL 6.04e-01 -0.0526 0.101 0.82 DC L1
ENSG00000116641 DOCK7 526667 sc-eQTL 8.38e-02 -0.179 0.103 0.82 DC L1
ENSG00000125703 ATG4C 430921 sc-eQTL 1.75e-01 -0.11 0.081 0.82 DC L1
ENSG00000142856 ITGB3BP -378668 sc-eQTL 3.87e-01 0.0984 0.114 0.82 DC L1
ENSG00000162607 USP1 778756 sc-eQTL 6.73e-01 0.0419 0.0993 0.82 DC L1
ENSG00000203965 EFCAB7 -308319 sc-eQTL 1.78e-01 -0.133 0.0986 0.82 DC L1
ENSG00000079739 PGM1 -378358 sc-eQTL 9.33e-01 0.00798 0.0954 0.818 Mono L1
ENSG00000088035 ALG6 -152522 sc-eQTL 2.99e-01 0.103 0.0993 0.818 Mono L1
ENSG00000116641 DOCK7 526667 sc-eQTL 2.84e-01 -0.103 0.096 0.818 Mono L1
ENSG00000125703 ATG4C 430921 sc-eQTL 9.70e-01 0.00247 0.0651 0.818 Mono L1
ENSG00000142856 ITGB3BP -378668 sc-eQTL 1.56e-01 -0.146 0.102 0.818 Mono L1
ENSG00000162607 USP1 778756 sc-eQTL 5.18e-01 0.0547 0.0844 0.818 Mono L1
ENSG00000079739 PGM1 -378358 sc-eQTL 4.33e-01 -0.0639 0.0814 0.818 NK L1
ENSG00000088035 ALG6 -152522 sc-eQTL 6.56e-01 -0.0426 0.0956 0.818 NK L1
ENSG00000116641 DOCK7 526667 sc-eQTL 9.89e-01 -0.00113 0.0787 0.818 NK L1
ENSG00000125703 ATG4C 430921 sc-eQTL 4.27e-01 0.0672 0.0844 0.818 NK L1
ENSG00000142856 ITGB3BP -378668 sc-eQTL 4.78e-01 0.0746 0.105 0.818 NK L1
ENSG00000162607 USP1 778756 sc-eQTL 8.18e-01 -0.0216 0.0939 0.818 NK L1
ENSG00000203965 EFCAB7 -308319 sc-eQTL 4.16e-01 0.0928 0.114 0.818 NK L1
ENSG00000079739 PGM1 -378358 sc-eQTL 3.43e-01 -0.0898 0.0944 0.818 Other_T L1
ENSG00000088035 ALG6 -152522 sc-eQTL 3.83e-01 0.0829 0.0949 0.818 Other_T L1
ENSG00000116641 DOCK7 526667 sc-eQTL 6.06e-01 0.0501 0.097 0.818 Other_T L1
ENSG00000125703 ATG4C 430921 sc-eQTL 8.02e-01 0.0211 0.084 0.818 Other_T L1
ENSG00000142856 ITGB3BP -378668 sc-eQTL 9.60e-01 -0.00376 0.0745 0.818 Other_T L1
ENSG00000162607 USP1 778756 sc-eQTL 8.43e-01 -0.0128 0.0646 0.818 Other_T L1
ENSG00000203965 EFCAB7 -308319 sc-eQTL 1.08e-01 0.185 0.114 0.818 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -378358 sc-eQTL 5.19e-01 -0.0802 0.124 0.816 B_Activated L2
ENSG00000088035 ALG6 -152522 sc-eQTL 6.99e-01 0.046 0.119 0.816 B_Activated L2
ENSG00000116641 DOCK7 526667 sc-eQTL 2.43e-01 -0.129 0.11 0.816 B_Activated L2
ENSG00000125703 ATG4C 430921 sc-eQTL 6.55e-01 -0.0522 0.116 0.816 B_Activated L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 1.73e-01 -0.155 0.113 0.816 B_Activated L2
ENSG00000162607 USP1 778756 sc-eQTL 1.60e-01 -0.173 0.123 0.816 B_Activated L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 3.15e-01 0.108 0.107 0.816 B_Activated L2
ENSG00000079739 PGM1 -378358 sc-eQTL 6.52e-01 0.0508 0.113 0.818 B_Intermediate L2
ENSG00000088035 ALG6 -152522 sc-eQTL 5.62e-02 0.218 0.113 0.818 B_Intermediate L2
ENSG00000116641 DOCK7 526667 sc-eQTL 9.83e-01 0.00237 0.109 0.818 B_Intermediate L2
ENSG00000125703 ATG4C 430921 sc-eQTL 2.56e-01 -0.105 0.0923 0.818 B_Intermediate L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 7.01e-01 0.0423 0.11 0.818 B_Intermediate L2
ENSG00000162607 USP1 778756 sc-eQTL 1.95e-01 0.142 0.11 0.818 B_Intermediate L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 9.99e-01 9.89e-05 0.109 0.818 B_Intermediate L2
ENSG00000079739 PGM1 -378358 sc-eQTL 3.85e-01 0.0957 0.11 0.817 B_Memory L2
ENSG00000088035 ALG6 -152522 sc-eQTL 9.82e-04 0.365 0.109 0.817 B_Memory L2
ENSG00000116641 DOCK7 526667 sc-eQTL 7.64e-01 0.0316 0.105 0.817 B_Memory L2
ENSG00000125703 ATG4C 430921 sc-eQTL 5.94e-01 -0.0533 0.0999 0.817 B_Memory L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 1.91e-01 0.149 0.114 0.817 B_Memory L2
ENSG00000162607 USP1 778756 sc-eQTL 4.65e-02 0.229 0.114 0.817 B_Memory L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 7.09e-01 -0.0425 0.113 0.817 B_Memory L2
ENSG00000079739 PGM1 -378358 sc-eQTL 7.71e-01 -0.032 0.11 0.818 B_Naive1 L2
ENSG00000088035 ALG6 -152522 sc-eQTL 1.19e-03 0.354 0.108 0.818 B_Naive1 L2
ENSG00000116641 DOCK7 526667 sc-eQTL 3.18e-01 -0.106 0.106 0.818 B_Naive1 L2
ENSG00000125703 ATG4C 430921 sc-eQTL 2.01e-01 -0.104 0.0812 0.818 B_Naive1 L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 9.07e-01 0.0126 0.108 0.818 B_Naive1 L2
ENSG00000162607 USP1 778756 sc-eQTL 8.63e-01 -0.0164 0.095 0.818 B_Naive1 L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 4.86e-01 -0.0805 0.115 0.818 B_Naive1 L2
ENSG00000079739 PGM1 -378358 sc-eQTL 5.02e-01 0.0729 0.108 0.818 B_Naive2 L2
ENSG00000088035 ALG6 -152522 sc-eQTL 7.76e-01 -0.0322 0.113 0.818 B_Naive2 L2
ENSG00000116641 DOCK7 526667 sc-eQTL 5.01e-01 0.0732 0.109 0.818 B_Naive2 L2
ENSG00000125703 ATG4C 430921 sc-eQTL 9.57e-01 0.00567 0.105 0.818 B_Naive2 L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 2.66e-01 0.126 0.113 0.818 B_Naive2 L2
ENSG00000162607 USP1 778756 sc-eQTL 9.86e-01 0.00191 0.108 0.818 B_Naive2 L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 9.07e-01 0.0132 0.113 0.818 B_Naive2 L2
ENSG00000079739 PGM1 -378358 sc-eQTL 1.15e-01 -0.172 0.109 0.816 CD4_CTL L2
ENSG00000088035 ALG6 -152522 sc-eQTL 1.02e-01 0.189 0.115 0.816 CD4_CTL L2
ENSG00000116641 DOCK7 526667 sc-eQTL 8.82e-01 -0.0151 0.101 0.816 CD4_CTL L2
ENSG00000125703 ATG4C 430921 sc-eQTL 1.48e-01 -0.151 0.104 0.816 CD4_CTL L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 6.68e-01 -0.048 0.112 0.816 CD4_CTL L2
ENSG00000162607 USP1 778756 sc-eQTL 3.26e-01 -0.105 0.106 0.816 CD4_CTL L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 4.24e-02 -0.215 0.105 0.816 CD4_CTL L2
ENSG00000079739 PGM1 -378358 sc-eQTL 7.56e-01 0.0279 0.0896 0.818 CD4_Naive L2
ENSG00000088035 ALG6 -152522 sc-eQTL 4.03e-02 -0.199 0.0964 0.818 CD4_Naive L2
ENSG00000116641 DOCK7 526667 sc-eQTL 3.95e-01 -0.0814 0.0956 0.818 CD4_Naive L2
ENSG00000125703 ATG4C 430921 sc-eQTL 4.65e-01 -0.0618 0.0845 0.818 CD4_Naive L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 5.51e-01 0.0618 0.103 0.818 CD4_Naive L2
ENSG00000162607 USP1 778756 sc-eQTL 7.31e-01 0.0272 0.079 0.818 CD4_Naive L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 7.60e-01 -0.0314 0.103 0.818 CD4_Naive L2
ENSG00000079739 PGM1 -378358 sc-eQTL 2.01e-01 0.118 0.0923 0.818 CD4_TCM L2
ENSG00000088035 ALG6 -152522 sc-eQTL 2.49e-01 0.124 0.107 0.818 CD4_TCM L2
ENSG00000116641 DOCK7 526667 sc-eQTL 8.65e-01 0.0162 0.0954 0.818 CD4_TCM L2
ENSG00000125703 ATG4C 430921 sc-eQTL 4.05e-01 -0.0773 0.0927 0.818 CD4_TCM L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 8.16e-01 -0.0255 0.109 0.818 CD4_TCM L2
ENSG00000162607 USP1 778756 sc-eQTL 3.00e-01 0.0931 0.0895 0.818 CD4_TCM L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 2.63e-01 -0.119 0.106 0.818 CD4_TCM L2
ENSG00000079739 PGM1 -378358 sc-eQTL 3.08e-01 -0.113 0.111 0.818 CD4_TEM L2
ENSG00000088035 ALG6 -152522 sc-eQTL 2.54e-01 0.128 0.112 0.818 CD4_TEM L2
ENSG00000116641 DOCK7 526667 sc-eQTL 9.09e-01 -0.0125 0.109 0.818 CD4_TEM L2
ENSG00000125703 ATG4C 430921 sc-eQTL 4.02e-01 0.0889 0.106 0.818 CD4_TEM L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 7.67e-02 0.193 0.109 0.818 CD4_TEM L2
ENSG00000162607 USP1 778756 sc-eQTL 2.97e-01 -0.108 0.103 0.818 CD4_TEM L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 4.95e-01 -0.0774 0.113 0.818 CD4_TEM L2
ENSG00000079739 PGM1 -378358 sc-eQTL 1.25e-01 -0.152 0.0986 0.818 CD8_CTL L2
ENSG00000088035 ALG6 -152522 sc-eQTL 9.59e-01 0.00543 0.105 0.818 CD8_CTL L2
ENSG00000116641 DOCK7 526667 sc-eQTL 8.65e-01 -0.0171 0.1 0.818 CD8_CTL L2
ENSG00000125703 ATG4C 430921 sc-eQTL 4.24e-01 0.0852 0.106 0.818 CD8_CTL L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 8.10e-01 0.0267 0.111 0.818 CD8_CTL L2
ENSG00000162607 USP1 778756 sc-eQTL 1.31e-01 0.15 0.0987 0.818 CD8_CTL L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 5.97e-01 0.06 0.113 0.818 CD8_CTL L2
ENSG00000079739 PGM1 -378358 sc-eQTL 4.44e-01 -0.0773 0.101 0.818 CD8_Naive L2
ENSG00000088035 ALG6 -152522 sc-eQTL 2.46e-01 -0.121 0.104 0.818 CD8_Naive L2
ENSG00000116641 DOCK7 526667 sc-eQTL 8.64e-01 0.0185 0.108 0.818 CD8_Naive L2
ENSG00000125703 ATG4C 430921 sc-eQTL 3.80e-01 -0.0911 0.104 0.818 CD8_Naive L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 6.10e-01 0.0536 0.105 0.818 CD8_Naive L2
ENSG00000162607 USP1 778756 sc-eQTL 7.09e-01 -0.0331 0.0888 0.818 CD8_Naive L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 5.12e-01 0.0649 0.0989 0.818 CD8_Naive L2
ENSG00000079739 PGM1 -378358 sc-eQTL 9.42e-01 -0.00834 0.114 0.822 CD8_TCM L2
ENSG00000088035 ALG6 -152522 sc-eQTL 1.54e-02 -0.278 0.114 0.822 CD8_TCM L2
ENSG00000116641 DOCK7 526667 sc-eQTL 6.04e-01 -0.0584 0.113 0.822 CD8_TCM L2
ENSG00000125703 ATG4C 430921 sc-eQTL 3.99e-01 -0.0973 0.115 0.822 CD8_TCM L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 6.79e-01 -0.0463 0.112 0.822 CD8_TCM L2
ENSG00000162607 USP1 778756 sc-eQTL 7.42e-01 0.0356 0.108 0.822 CD8_TCM L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 4.15e-01 0.0931 0.114 0.822 CD8_TCM L2
ENSG00000079739 PGM1 -378358 sc-eQTL 5.75e-02 0.213 0.111 0.817 CD8_TEM L2
ENSG00000088035 ALG6 -152522 sc-eQTL 6.87e-01 0.0456 0.113 0.817 CD8_TEM L2
ENSG00000116641 DOCK7 526667 sc-eQTL 6.40e-01 -0.0513 0.109 0.817 CD8_TEM L2
ENSG00000125703 ATG4C 430921 sc-eQTL 3.90e-01 0.0904 0.105 0.817 CD8_TEM L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 7.96e-01 0.0295 0.114 0.817 CD8_TEM L2
ENSG00000162607 USP1 778756 sc-eQTL 8.44e-01 0.0215 0.109 0.817 CD8_TEM L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 2.05e-01 0.14 0.11 0.817 CD8_TEM L2
ENSG00000079739 PGM1 -378358 sc-eQTL 6.64e-01 0.046 0.106 0.818 MAIT L2
ENSG00000088035 ALG6 -152522 sc-eQTL 1.46e-01 0.152 0.104 0.818 MAIT L2
ENSG00000116641 DOCK7 526667 sc-eQTL 7.94e-01 0.0262 0.1 0.818 MAIT L2
ENSG00000125703 ATG4C 430921 sc-eQTL 9.84e-02 -0.174 0.105 0.818 MAIT L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 4.28e-01 0.084 0.106 0.818 MAIT L2
ENSG00000162607 USP1 778756 sc-eQTL 1.97e-01 0.135 0.105 0.818 MAIT L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 2.23e-02 0.248 0.108 0.818 MAIT L2
ENSG00000079739 PGM1 -378358 sc-eQTL 4.75e-01 -0.0768 0.107 0.816 NK_CD56bright L2
ENSG00000088035 ALG6 -152522 sc-eQTL 6.14e-01 -0.0556 0.11 0.816 NK_CD56bright L2
ENSG00000116641 DOCK7 526667 sc-eQTL 6.54e-01 0.0429 0.0954 0.816 NK_CD56bright L2
ENSG00000125703 ATG4C 430921 sc-eQTL 1.58e-01 0.15 0.106 0.816 NK_CD56bright L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 5.64e-01 0.0641 0.111 0.816 NK_CD56bright L2
ENSG00000162607 USP1 778756 sc-eQTL 4.10e-03 -0.326 0.112 0.816 NK_CD56bright L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 1.89e-01 0.144 0.109 0.816 NK_CD56bright L2
ENSG00000079739 PGM1 -378358 sc-eQTL 5.69e-01 -0.0484 0.0848 0.817 NK_CD56dim L2
ENSG00000088035 ALG6 -152522 sc-eQTL 4.78e-01 0.0765 0.108 0.817 NK_CD56dim L2
ENSG00000116641 DOCK7 526667 sc-eQTL 3.84e-01 0.0817 0.0936 0.817 NK_CD56dim L2
ENSG00000125703 ATG4C 430921 sc-eQTL 6.42e-01 0.0443 0.0952 0.817 NK_CD56dim L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 5.40e-01 0.0665 0.108 0.817 NK_CD56dim L2
ENSG00000162607 USP1 778756 sc-eQTL 4.80e-01 0.0742 0.105 0.817 NK_CD56dim L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 5.92e-01 0.0629 0.117 0.817 NK_CD56dim L2
ENSG00000079739 PGM1 -378358 sc-eQTL 8.84e-01 -0.017 0.116 0.815 NK_HLA L2
ENSG00000088035 ALG6 -152522 sc-eQTL 2.46e-01 -0.139 0.12 0.815 NK_HLA L2
ENSG00000116641 DOCK7 526667 sc-eQTL 3.96e-01 0.0781 0.0917 0.815 NK_HLA L2
ENSG00000125703 ATG4C 430921 sc-eQTL 2.64e-01 -0.119 0.107 0.815 NK_HLA L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 6.60e-01 -0.0493 0.112 0.815 NK_HLA L2
ENSG00000162607 USP1 778756 sc-eQTL 1.43e-01 -0.172 0.117 0.815 NK_HLA L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 9.76e-01 -0.00328 0.107 0.815 NK_HLA L2
ENSG00000079739 PGM1 -378358 sc-eQTL 5.02e-01 -0.0621 0.0924 0.817 NK_cytokine L2
ENSG00000088035 ALG6 -152522 sc-eQTL 8.73e-01 -0.0168 0.105 0.817 NK_cytokine L2
ENSG00000116641 DOCK7 526667 sc-eQTL 7.42e-01 -0.0319 0.0969 0.817 NK_cytokine L2
ENSG00000125703 ATG4C 430921 sc-eQTL 7.25e-01 0.0349 0.0991 0.817 NK_cytokine L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 9.15e-01 0.011 0.103 0.817 NK_cytokine L2
ENSG00000162607 USP1 778756 sc-eQTL 8.82e-01 -0.016 0.108 0.817 NK_cytokine L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 6.89e-01 0.0438 0.109 0.817 NK_cytokine L2
ENSG00000079739 PGM1 -378358 sc-eQTL 1.47e-01 0.202 0.139 0.833 PB L2
ENSG00000088035 ALG6 -152522 sc-eQTL 6.05e-01 0.0761 0.147 0.833 PB L2
ENSG00000116641 DOCK7 526667 sc-eQTL 3.91e-01 0.135 0.157 0.833 PB L2
ENSG00000125703 ATG4C 430921 sc-eQTL 2.94e-02 -0.296 0.134 0.833 PB L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 2.94e-01 -0.143 0.136 0.833 PB L2
ENSG00000162607 USP1 778756 sc-eQTL 2.70e-01 -0.15 0.135 0.833 PB L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 2.99e-01 0.156 0.149 0.833 PB L2
ENSG00000079739 PGM1 -378358 sc-eQTL 8.47e-01 -0.0195 0.101 0.82 Pro_T L2
ENSG00000088035 ALG6 -152522 sc-eQTL 8.38e-02 0.177 0.102 0.82 Pro_T L2
ENSG00000116641 DOCK7 526667 sc-eQTL 5.07e-02 0.2 0.102 0.82 Pro_T L2
ENSG00000125703 ATG4C 430921 sc-eQTL 7.09e-01 0.0337 0.0901 0.82 Pro_T L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 4.96e-01 -0.0615 0.0903 0.82 Pro_T L2
ENSG00000162607 USP1 778756 sc-eQTL 3.76e-01 -0.055 0.062 0.82 Pro_T L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 5.94e-01 -0.056 0.105 0.82 Pro_T L2
ENSG00000079739 PGM1 -378358 sc-eQTL 8.79e-01 -0.016 0.105 0.818 Treg L2
ENSG00000088035 ALG6 -152522 sc-eQTL 2.72e-01 -0.123 0.112 0.818 Treg L2
ENSG00000116641 DOCK7 526667 sc-eQTL 6.90e-01 -0.0411 0.103 0.818 Treg L2
ENSG00000125703 ATG4C 430921 sc-eQTL 5.23e-01 -0.0673 0.105 0.818 Treg L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 3.02e-01 0.114 0.11 0.818 Treg L2
ENSG00000162607 USP1 778756 sc-eQTL 7.23e-01 -0.0379 0.107 0.818 Treg L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 8.22e-01 -0.0238 0.105 0.818 Treg L2
ENSG00000079739 PGM1 -378358 sc-eQTL 1.90e-01 -0.136 0.103 0.81 cDC L2
ENSG00000088035 ALG6 -152522 sc-eQTL 3.94e-01 -0.0898 0.105 0.81 cDC L2
ENSG00000116641 DOCK7 526667 sc-eQTL 7.16e-02 -0.186 0.103 0.81 cDC L2
ENSG00000125703 ATG4C 430921 sc-eQTL 3.08e-01 -0.0916 0.0896 0.81 cDC L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 4.08e-01 0.0942 0.114 0.81 cDC L2
ENSG00000162607 USP1 778756 sc-eQTL 8.44e-01 0.02 0.101 0.81 cDC L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 7.51e-01 0.0291 0.0915 0.81 cDC L2
ENSG00000079739 PGM1 -378358 sc-eQTL 5.31e-01 0.0621 0.099 0.818 cMono_IL1B L2
ENSG00000088035 ALG6 -152522 sc-eQTL 1.01e-01 0.163 0.0986 0.818 cMono_IL1B L2
ENSG00000116641 DOCK7 526667 sc-eQTL 8.95e-02 -0.177 0.104 0.818 cMono_IL1B L2
ENSG00000125703 ATG4C 430921 sc-eQTL 7.70e-01 0.0216 0.0736 0.818 cMono_IL1B L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 6.06e-01 -0.0538 0.104 0.818 cMono_IL1B L2
ENSG00000162607 USP1 778756 sc-eQTL 1.59e-01 0.129 0.0915 0.818 cMono_IL1B L2
ENSG00000079739 PGM1 -378358 sc-eQTL 8.12e-01 -0.0259 0.109 0.818 cMono_S100A L2
ENSG00000088035 ALG6 -152522 sc-eQTL 7.74e-01 -0.0319 0.111 0.818 cMono_S100A L2
ENSG00000116641 DOCK7 526667 sc-eQTL 7.42e-01 0.0339 0.103 0.818 cMono_S100A L2
ENSG00000125703 ATG4C 430921 sc-eQTL 4.26e-01 -0.0708 0.0887 0.818 cMono_S100A L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 1.68e-01 -0.138 0.0998 0.818 cMono_S100A L2
ENSG00000162607 USP1 778756 sc-eQTL 3.18e-01 -0.103 0.103 0.818 cMono_S100A L2
ENSG00000079739 PGM1 -378358 sc-eQTL 8.15e-01 -0.0278 0.119 0.8 gdT L2
ENSG00000088035 ALG6 -152522 sc-eQTL 6.35e-01 0.0601 0.126 0.8 gdT L2
ENSG00000116641 DOCK7 526667 sc-eQTL 5.93e-01 0.0664 0.124 0.8 gdT L2
ENSG00000125703 ATG4C 430921 sc-eQTL 1.76e-03 0.365 0.115 0.8 gdT L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 6.83e-01 -0.0515 0.126 0.8 gdT L2
ENSG00000162607 USP1 778756 sc-eQTL 6.80e-01 -0.0492 0.119 0.8 gdT L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 1.30e-01 0.187 0.123 0.8 gdT L2
ENSG00000079739 PGM1 -378358 sc-eQTL 7.81e-01 0.0304 0.109 0.816 intMono L2
ENSG00000088035 ALG6 -152522 sc-eQTL 4.85e-01 -0.0713 0.102 0.816 intMono L2
ENSG00000116641 DOCK7 526667 sc-eQTL 9.28e-01 0.00946 0.104 0.816 intMono L2
ENSG00000125703 ATG4C 430921 sc-eQTL 8.62e-01 0.0173 0.0994 0.816 intMono L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 8.92e-01 -0.0149 0.11 0.816 intMono L2
ENSG00000162607 USP1 778756 sc-eQTL 4.80e-01 0.0788 0.111 0.816 intMono L2
ENSG00000079739 PGM1 -378358 sc-eQTL 1.43e-01 -0.145 0.0983 0.814 ncMono L2
ENSG00000088035 ALG6 -152522 sc-eQTL 2.09e-01 0.136 0.108 0.814 ncMono L2
ENSG00000116641 DOCK7 526667 sc-eQTL 1.75e-01 -0.145 0.106 0.814 ncMono L2
ENSG00000125703 ATG4C 430921 sc-eQTL 7.22e-01 0.0355 0.0998 0.814 ncMono L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 8.58e-01 0.0187 0.104 0.814 ncMono L2
ENSG00000162607 USP1 778756 sc-eQTL 2.09e-01 0.134 0.106 0.814 ncMono L2
ENSG00000079739 PGM1 -378358 sc-eQTL 9.92e-01 -0.00116 0.115 0.797 pDC L2
ENSG00000088035 ALG6 -152522 sc-eQTL 8.92e-01 -0.0153 0.112 0.797 pDC L2
ENSG00000116641 DOCK7 526667 sc-eQTL 2.07e-01 -0.144 0.114 0.797 pDC L2
ENSG00000125703 ATG4C 430921 sc-eQTL 7.53e-01 -0.0323 0.103 0.797 pDC L2
ENSG00000142856 ITGB3BP -378668 sc-eQTL 4.11e-01 0.0947 0.115 0.797 pDC L2
ENSG00000162607 USP1 778756 sc-eQTL 5.21e-01 0.0754 0.117 0.797 pDC L2
ENSG00000203965 EFCAB7 -308319 sc-eQTL 9.57e-03 -0.262 0.0997 0.797 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -378358 sc-eQTL 7.81e-01 0.0288 0.103 0.818 B_Memory LOneK1K
ENSG00000088035 ALG6 -152522 sc-eQTL 6.22e-04 0.386 0.111 0.818 B_Memory LOneK1K
ENSG00000116641 DOCK7 526667 sc-eQTL 8.31e-01 0.0212 0.0991 0.818 B_Memory LOneK1K
ENSG00000125703 ATG4C 430921 sc-eQTL 2.56e-01 -0.091 0.0799 0.818 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -378668 sc-eQTL 4.10e-01 0.0868 0.105 0.818 B_Memory LOneK1K
ENSG00000162607 USP1 778756 sc-eQTL 1.72e-01 0.14 0.102 0.818 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -308319 sc-eQTL 8.12e-01 0.0261 0.11 0.818 B_Memory LOneK1K
ENSG00000079739 PGM1 -378358 sc-eQTL 5.37e-01 0.0666 0.108 0.818 B_Naive LOneK1K
ENSG00000088035 ALG6 -152522 sc-eQTL 1.79e-02 0.261 0.11 0.818 B_Naive LOneK1K
ENSG00000116641 DOCK7 526667 sc-eQTL 4.48e-01 -0.0788 0.104 0.818 B_Naive LOneK1K
ENSG00000125703 ATG4C 430921 sc-eQTL 6.12e-01 -0.0402 0.0791 0.818 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -378668 sc-eQTL 4.28e-01 0.0888 0.112 0.818 B_Naive LOneK1K
ENSG00000162607 USP1 778756 sc-eQTL 8.11e-01 0.023 0.0961 0.818 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -308319 sc-eQTL 5.64e-01 -0.0649 0.112 0.818 B_Naive LOneK1K
ENSG00000079739 PGM1 -378358 sc-eQTL 9.85e-01 -0.00187 0.101 0.818 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -152522 sc-eQTL 1.60e-01 0.138 0.0977 0.818 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 526667 sc-eQTL 2.38e-01 -0.117 0.0985 0.818 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 430921 sc-eQTL 7.64e-01 -0.0205 0.0683 0.818 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -378668 sc-eQTL 2.34e-01 -0.12 0.101 0.818 CD14_Mono LOneK1K
ENSG00000162607 USP1 778756 sc-eQTL 8.74e-01 0.0137 0.0863 0.818 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -378358 sc-eQTL 8.34e-01 -0.0203 0.0964 0.819 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -152522 sc-eQTL 7.65e-01 0.0328 0.109 0.819 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 526667 sc-eQTL 5.33e-01 -0.0675 0.108 0.819 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 430921 sc-eQTL 9.72e-01 0.00323 0.0923 0.819 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -378668 sc-eQTL 5.48e-01 -0.0644 0.107 0.819 CD16_Mono LOneK1K
ENSG00000162607 USP1 778756 sc-eQTL 2.45e-01 0.117 0.1 0.819 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -378358 sc-eQTL 2.91e-01 -0.0873 0.0825 0.817 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -152522 sc-eQTL 9.81e-01 -0.00242 0.0993 0.817 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 526667 sc-eQTL 9.58e-01 0.00472 0.089 0.817 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 430921 sc-eQTL 6.01e-01 0.0465 0.0887 0.817 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -378668 sc-eQTL 5.19e-01 0.068 0.105 0.817 NK_CD56dim LOneK1K
ENSG00000162607 USP1 778756 sc-eQTL 6.45e-01 0.044 0.0955 0.817 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -308319 sc-eQTL 8.57e-01 0.021 0.116 0.817 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000142856 ITGB3BP -378668 eQTL 0.0118 0.0934 0.037 0.0 0.0 0.203
ENSG00000162607 USP1 778756 eQTL 0.0491 0.0321 0.0163 0.0 0.0 0.203

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162607 USP1 778756 2.67e-07 1.25e-07 5.14e-08 1.83e-07 9.02e-08 9.8e-08 1.61e-07 5.49e-08 1.45e-07 4.38e-08 1.62e-07 8.36e-08 1.45e-07 6.38e-08 5.55e-08 7.5e-08 4.48e-08 1.18e-07 5.39e-08 4.23e-08 1.04e-07 1.27e-07 1.34e-07 4.26e-08 1.4e-07 1.19e-07 1.08e-07 9.32e-08 1.05e-07 1.07e-07 9.7e-08 3.8e-08 3.28e-08 8.65e-08 7.36e-08 3.93e-08 5.22e-08 9.22e-08 7.2e-08 3.09e-08 4.76e-08 1.35e-07 4.04e-08 7.78e-09 8.16e-08 1.87e-08 1.22e-07 4.09e-09 4.77e-08